View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15875_high_30 (Length: 317)
Name: NF15875_high_30
Description: NF15875
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15875_high_30 |
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Alignment Details
Target: chr3 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 8 - 296
Target Start/End: Complemental strand, 42063040 - 42062752
Alignment:
| Q |
8 |
ggcaataatgagtttgtgtaatggatcacataactagtactgattctccatatctcagtgatagttgacactggagagggatctttgcagcaataagagg |
107 |
Q |
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| T |
42063040 |
ggcaataatgagtttgtgtaatggatcacataactagtactgattctccatatctcagtgatagttgacactggagagggatctttgtagcaataagagg |
42062941 |
T |
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| Q |
108 |
ataaagtgaagaaagagtgcaatgcgaagttcttttggttcaaagtctaaaatttcccttgataggtttcccattaatgtgaagtaactcaccctccccc |
207 |
Q |
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|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |
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| T |
42062940 |
ataaagtgaagaaagagtgcaaggcaaagttcttttggttcaaagtctaaaatttcccttgataggtttcccattattgtgaagcaactcaccctccccc |
42062841 |
T |
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| Q |
208 |
tcatccttcgtattcatttcagttgggatgcttccagcggaaggctgagttacgttcattacttagctgatcagattggtatgatgatg |
296 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42062840 |
tcatctttcgtattcatttcagttgggatgcttccagcggaaggctgagttacgttcattacttagctgatcagattggtatgatgatg |
42062752 |
T |
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