View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15877_low_4 (Length: 386)
Name: NF15877_low_4
Description: NF15877
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15877_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 351; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 44006814 - 44007188
Alignment:
| Q |
1 |
tactaacgttccacacaggttctgtactaaaacagtttttatcattaaaaatagccgcatctacattgtttcaactctcgcacatccggtgcaatccatc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
44006814 |
tactaacgttccacacaggttctgtactaaaacagtttttatcattaacaatagccgcatctacattgtttcaactctcccacatccggtgcaatccatc |
44006913 |
T |
|
| Q |
101 |
tctgactattacacccgtttcagccagtcccatactaacccgcgcatgaactgcacctgctgcactggtttccaattcaacctaccacttcaagtgttcc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
44006914 |
tctgactattacacccgtttcagccagtcccatactaacccgcgcatgaactgcacctgctgcactggtttccacttcaacctaccacttcaagtgttcc |
44007013 |
T |
|
| Q |
201 |
atgatatagtggtaattccattttgagtaaatttccaactcatctcatccacttgatcttcgtcaaaaagatgtatcgctaaaatacatgatgcatccct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
44007014 |
atgatatagtggtaattccattttgagtaaatttccaactcatctcatccacttgatcttccccaaaaagatgtatcgctaaaatacatgatgcatccct |
44007113 |
T |
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| Q |
301 |
ctcactaaaattgctctccacaaaacttatgcgccactgccttctattttcttctacaagttctgacacattcat |
375 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
44007114 |
ctcactaaaattgctctccacaaaacttatgcgccactgccttctattttcttctataagttctgacacattcat |
44007188 |
T |
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