View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15878_high_17 (Length: 264)
Name: NF15878_high_17
Description: NF15878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15878_high_17 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 36356258 - 36356514
Alignment:
| Q |
8 |
attattctcctcttgaatacatcttgagtcatttttcccatgggtagaaatttcatgtggaacgcaacctagaaggcttaatccaactaaagaaaacttt |
107 |
Q |
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| T |
36356258 |
attattctcctcttgaatacaccttgaatcatttttcccatgggtagaaatttcatgtggaacgcaacctagaaggcttaatccaactaaagaaaacttt |
36356357 |
T |
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| Q |
108 |
cttgctccaagcccatgtatagcctgcacatgcactcacacaaatcagataaacattaactgctgcaaataaatcatgtgattgttaagcaacatcctac |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |
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| T |
36356358 |
cttgctccaagcccatgtatagcctgcacatgcactcacacaaatcagataaacattaactgctgcaaataaatcatgtgattgttaagcaaaatcatac |
36356457 |
T |
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| Q |
208 |
aagtgatgttcaaatattaaactccaacatgtgataattcatgtacaacgtgagtgt |
264 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| |
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| T |
36356458 |
aagtgatgttcaaatattaaactccaacgtgtgataattcatggacaaagtgagtgt |
36356514 |
T |
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