View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15878_high_24 (Length: 240)
Name: NF15878_high_24
Description: NF15878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15878_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 37661702 - 37661478
Alignment:
| Q |
1 |
cgattcttttattttggaagtgaacaaattgataagagatagacttttattatttatgtacagagcggttctatagatatttgatagattacaatataaa |
100 |
Q |
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| T |
37661702 |
cgattcttttatttgggaagtgaacaaattgataagagatagacttttattatttatgtacagagcggttctatagatatttgatagattacaatataaa |
37661603 |
T |
|
| Q |
101 |
acatttcatgtttcatctcattccattttattttaaaccaatccaaacaatgagagataattctattccattttattttgcgacattcccttaatct-aa |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
37661602 |
acatttcatgtttcatctcattccattttattttaaaccaatccaaacaatgagagataattctattccattttattttgcgacattcccttaatctaaa |
37661503 |
T |
|
| Q |
200 |
atatagccttctaatattcagaagt |
224 |
Q |
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||||||||||||||||||||||||| |
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| T |
37661502 |
atatagccttctaatattcagaagt |
37661478 |
T |
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