View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15882_low_13 (Length: 276)
Name: NF15882_low_13
Description: NF15882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15882_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 12550246 - 12550491
Alignment:
| Q |
17 |
aaaaggtgtgattaaggttaaccctacaatgaagacaacattgatggattgggagcaggtggagactgcttaatgcttgagagaattatcaatgatgcag |
116 |
Q |
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| T |
12550246 |
aaaaggtgtgattaaggttaaccctacaatgaagacaacattgatggattgggagcaggtggagactgcttaatgcttgagagaattatcaatgatgcag |
12550345 |
T |
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| Q |
117 |
aggttggttggtaataacaatgtatccgatgcatgcaaataaaaagaaaatgacaaaagttgtgacaccattgatgagaaaacaagcaactcagaatttc |
216 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12550346 |
aggttggttggtaataacaatgtattcgatgcatgcaaataaaaagaaaatgacaaaagttgtgacaccattgatgagaaaacaagcaactcagaatttc |
12550445 |
T |
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| Q |
217 |
tttttaaatctttatttaccaaatctttgaatattaaggttggcca |
262 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12550446 |
tttttaaatctttatttaccaaatctttgaatattaaggttggcca |
12550491 |
T |
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