View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15882_low_9 (Length: 392)
Name: NF15882_low_9
Description: NF15882
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15882_low_9 |
 | |
|
| [»] scaffold0110 (1 HSPs) |
| | |
|
| [»] scaffold0572 (1 HSPs) |
| | |
|
| [»] scaffold0573 (1 HSPs) |
| | |
|
| [»] scaffold0014 (1 HSPs) |
| | |
|
| [»] scaffold0429 (1 HSPs) |
| | |
|
| [»] scaffold0654 (1 HSPs) |
| | |
|
| [»] scaffold0652 (1 HSPs) |
| | |
|
| [»] scaffold0308 (1 HSPs) |
| | |
|
| [»] scaffold0237 (1 HSPs) |
| | |
|
| [»] scaffold0019 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 362; Significance: 0; HSPs: 50)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 30135002 - 30135379
Alignment:
| Q |
1 |
gccgtgaatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacct |
100 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
30135002 |
gccgtgaatctcttaaacgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcatatcggggagaacct |
30135101 |
T |
|
| Q |
101 |
ctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatca |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30135102 |
ctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatca |
30135201 |
T |
|
| Q |
201 |
ggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaa |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30135202 |
ggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatatgcaaaaa |
30135301 |
T |
|
| Q |
301 |
tggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttagatgttataatgtataa |
378 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30135302 |
tggaaaacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttagatgttataatgtataa |
30135379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 58 - 375
Target Start/End: Original strand, 24942134 - 24942450
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| | ||||| ||||||||| |||||| |
|
|
| T |
24942134 |
tacagttcgcttattgatggactttgcaaatcgggaagaatctctgatgtttgggatcttatagatgagatgcataatagaggccaacctgctgatgtga |
24942233 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
|||| |||||||| |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
24942234 |
tcacgtacaattccttattggatgctttgttcaaaaaccatcagg-ttgacaaggcaattacattattaatgaagatcaaagaccaaggaattcagccaa |
24942332 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatca |
357 |
Q |
| |
|
|| ||||||| ||||| |||||||||||||| | ||||||||||||||| ||||| ||||| ||||||||||||| ||||||| ||||||| ||||| |
|
|
| T |
24942333 |
atatgtatacttacactatacttgttgatggactatgcaaaaatggaagatttaagcatgcacaagcggtttatcagtatcttctttttaagggctatca |
24942432 |
T |
|
| Q |
358 |
tttagatgttataatgta |
375 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
24942433 |
tttagatgttaaaatgta |
24942450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 24934544 - 24934920
Alignment:
| Q |
1 |
gccgtgaatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacct |
100 |
Q |
| |
|
||||| |||||||| || ||||||||||||||||| ||| ||||| | || | || |||| ||| ||||| ||||| ||| ||||| ||||||| || |
|
|
| T |
24934544 |
gccgttaatctcttcaaagaaatgcattccaaaagtatggctcctaatactgtaacatacaattcacttatcgatggtcttctcaaatatgggagaatct |
24934643 |
T |
|
| Q |
101 |
ctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatca |
200 |
Q |
| |
|
|||||| |||||||||| || ||||||||||| | ||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
24934644 |
ctgatgcttgggatcttgtaaatgagatgcataatagaggccaacctgccgatgtgatcacttacagttccttattggatgctttgtgcaaaaaccatca |
24934743 |
T |
|
| Q |
201 |
ggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaa |
300 |
Q |
| |
|
|||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||| | ||||| ||||| |||||||||||||| | |||||||| |
|
|
| T |
24934744 |
ggtt-gacaaggcaatcacattaataacgaagatcaaagaccaaggaattcagccaaatatttatacttacactatacttgttgatggactatgcaaaaa |
24934842 |
T |
|
| Q |
301 |
tggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttagatgttataatgtataa |
378 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||||||| ||||||||| |
|
|
| T |
24934843 |
tggaagacttaaggatgcacaagcggtttatcaggatcttcttattaagggctatcatttagatgttaaaatgtataa |
24934920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 6 - 367
Target Start/End: Complemental strand, 29953811 - 29953451
Alignment:
| Q |
6 |
gaatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacctctgat |
105 |
Q |
| |
|
||||||||| || || |||||||||| || ||||||||||| ||| | | |||| ||| ||||||||||||||||||||||| ||||| | ||||||| |
|
|
| T |
29953811 |
gaatctcttcaaagatatgcattccagaaatatgactcctgatacaatatcatacaattctcttattgatggactttgcaaatcagggagcatctctgat |
29953712 |
T |
|
| Q |
106 |
gtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggttt |
205 |
Q |
| |
|
||||||||||||||||||||||||||| | ||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
29953711 |
gtttgggatcttatagatgagatgcataatagatgtcaaccggttaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcagg-tt |
29953613 |
T |
|
| Q |
206 |
gacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaa |
305 |
Q |
| |
|
|||||||| || ||||||||| |||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||||| | ||||||||||||| |
|
|
| T |
29953612 |
gacaaggcgattgcattattaaagaagatgaaagaccaagggattcagccaaatatgtatacatacactatacttgttgatgggctatgcaaaaatggaa |
29953513 |
T |
|
| Q |
306 |
gacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttagatgtt |
367 |
Q |
| |
|
||||| ||||||| || | ||||||| |||||||||| |||||| |||| |||| ||||| |
|
|
| T |
29953512 |
gacttgcggatgcacgagagatttatcatgatcttctgactaagggttatcctttaaatgtt |
29953451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 58 - 367
Target Start/End: Complemental strand, 29949962 - 29949654
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| | | ||||||||||| | ||| |||||||||||||||| |
|
|
| T |
29949962 |
tacaattctcttattgatggactttgcaaatcagggagaatctctgatgtttgggatcttcttgtcgagatgcatgatataggccaacctgctaatgtga |
29949863 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| || ||||||||| ||||| ||||||||||| |||||||||| |
|
|
| T |
29949862 |
tcacttacaattctttattagatgctttatgcaaaaaccatcagg-ttgacaaggcgattgcattattaaaaaagataaaagaccaaggaattcagccaa |
29949764 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatca |
357 |
Q |
| |
|
|| ||||||||||||| |||||||||||||| | |||||||||||||||||| |||||||| ||| | ||||||| |||||||||| |||||| |||| |
|
|
| T |
29949763 |
atatgtatacatacactatacttgttgatggactatgcaaaaatggaagacttgaggatgcacaagagatttatcatgatcttctgactaagggttatcc |
29949664 |
T |
|
| Q |
358 |
tttagatgtt |
367 |
Q |
| |
|
|||| ||||| |
|
|
| T |
29949663 |
tttaaatgtt |
29949654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 24739317 - 24738956
Alignment:
| Q |
1 |
gccgtgaatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacct |
100 |
Q |
| |
|
||||| |||||| | || ||||||||||||||||| ||| ||||| | || | || |||| ||| ||||| ||||| ||| |||||| ||||||| || |
|
|
| T |
24739317 |
gccgttaatctcctcaaagaaatgcattccaaaagtatggctcctaatactgtaacatacagttcacttatcgatggtcttcacaaatctgggagaatct |
24739218 |
T |
|
| Q |
101 |
ctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatca |
200 |
Q |
| |
|
||||| |||||||||| || ||||||||||| | ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
24739217 |
ttgatgcttgggatcttgtaaatgagatgcataatagaggccaacctgctgatgtgatcacttacaattccttattggatgctttgtgcaaaaaccatca |
24739118 |
T |
|
| Q |
201 |
ggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaa |
300 |
Q |
| |
|
|| |||||||||||||||||||| | |||||||||||||||||||| |||||||| || | |||||||||||| ||||||||||||| | |||||||| |
|
|
| T |
24739117 |
gg-ttgacaaggcaatcacattacttacgaagatcaaagaccaaggaattcagccggatatatatacatacacaatacttgttgatggtttatgcaaaaa |
24739019 |
T |
|
| Q |
301 |
tggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttaga |
363 |
Q |
| |
|
||||||||| ||||| || ||| ||||||||| |||| ||||||| || ||||||||||| |
|
|
| T |
24739018 |
tggaagactcaaggacgcgcaagaggtttatcagattcttttgattaaaggctatcatttaga |
24738956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 21160747 - 21160386
Alignment:
| Q |
1 |
gccgtgaatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacct |
100 |
Q |
| |
|
||||| |||||||| || |||||||||| |||| ||| ||||||| | | || |||| ||| ||||| ||||| ||| ||||| ||||||| || |
|
|
| T |
21160747 |
gccgttaatctctttaaagaaatgcatttaaaaaacatggctcctgatattgtaacatacaattcacttatcgatggtcttctcaaatatgggagaatct |
21160648 |
T |
|
| Q |
101 |
ctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatca |
200 |
Q |
| |
|
|||||| |||||||||| || ||||||||||| | ||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
21160647 |
ctgatgcttgggatcttgtaaatgagatgcataatagaggccaacctgctgatgtgatcacttacaattccttattggatgctttgtgcaaaaaccatca |
21160548 |
T |
|
| Q |
201 |
ggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaa |
300 |
Q |
| |
|
|| |||||| ||||||||||||||| |||||||| ||||||||||| |||||||| || | |||||||||||| ||||||||||||| | |||||||| |
|
|
| T |
21160547 |
gg-ttgacatggcaatcacattatttacgaagataaaagaccaaggaattcagccgtatatatatacatacacaatacttgttgatggtttatgcaaaaa |
21160449 |
T |
|
| Q |
301 |
tggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttaga |
363 |
Q |
| |
|
||||||||||||||| || ||| ||| ||||| |||| ||||||| || ||||||||||| |
|
|
| T |
21160448 |
tggaagacttaaggacgcgcaagaggtctatcagattcttttgattaaaggctatcatttaga |
21160386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 58 - 342
Target Start/End: Original strand, 30053361 - 30053644
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || || | | |||||||| |||||| | | |
|
|
| T |
30053361 |
tacagttcacttattgatggactttgcaaatcgggaagaatctctgatgtttgggatcttatagatgatatttataattgtggtcaaccagctaatataa |
30053460 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||| | || ||||||||||| |||||| |||| ||||||||| |
|
|
| T |
30053461 |
tcacttacaattctttattatatggattgtgcaaaaaccatcaggtt-gacaaggcaattgcgttgttaacgaagatgaaagacgaaggaattcagccag |
30053559 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttct |
342 |
Q |
| |
|
|| ||| |||||||||| ||||||||||||| | ||||||||||||||||||||||||||| || | ||||||| |||||||| |
|
|
| T |
30053560 |
atatgtttacatacacaacacttgttgatggactatgcaaaaatggaagacttaaggatgcacaaaggatttatcaggatcttct |
30053644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 365
Target Start/End: Original strand, 30149404 - 30149767
Alignment:
| Q |
1 |
gccgtgaatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacct |
100 |
Q |
| |
|
||||| ||||| || || ||||||||||| ||| |||| |||| |||| | || |||| ||| |||||||||||||||||||||| |||||| | |
|
|
| T |
30149404 |
gccgtaaatcttttcaaagaaatgcattcgaaagatatgattcctaacactgtaacatacaattcccttattgatggactttgcaaattagggagagtat |
30149503 |
T |
|
| Q |
101 |
ctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatca |
200 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| ||||||||||| | | | |||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
30149504 |
ctgatgtttgggattttatagatgagatgcatgatagaggtcaaccaaccgacataatcacttacaattctttatttgatggattgtgcaaaaaccatca |
30149603 |
T |
|
| Q |
201 |
ggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaa |
300 |
Q |
| |
|
|||| |||| |||||| ||||||||| |||||||||||||| || |||||||||| | ||||| ||||||| ||||| ||| |||| | |||||||| |
|
|
| T |
30149604 |
ggtt-gacagggcaattgcattattaaaaaagatcaaagaccagggaattcagccaagtatgtattcatacactatactttttgttggactatgcaaaaa |
30149702 |
T |
|
| Q |
301 |
tggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttagatg |
365 |
Q |
| |
|
||||||||| |||||||| ||| ||||||| |||||| |||||| || ||||||||||||| |
|
|
| T |
30149703 |
cggaagacttgaggatgcacaagaagtttatcgggatcttacgattaaaggctatcatttagatg |
30149767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 58 - 360
Target Start/End: Original strand, 24898011 - 24898312
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| |||||||||| ||| | | | |
|
|
| T |
24898011 |
tacagttcacttattgatggactttgcaaatcggggaaaatatctgatgtttgggatcttatagatgatatgcatgatagaggtcaacaagctgacataa |
24898110 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
||| ||||| || ||||||||||| |||| ||||||||||| | ||||||||||||| | ||||| | |||||||||||||| || ||| | ||| |
|
|
| T |
24898111 |
tcatttacacctcgttattggatgcattgtttaaaaaccatcaag-ttgacaaggcaattgcgttattgaagaagatcaaagaccggggaattgaaccag |
24898209 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatca |
357 |
Q |
| |
|
|| ||| ||||||||| | |||||||||||| | ||||||||||||||||||||||||||| ||| |||||||| |||||| || ||||||| ||||| |
|
|
| T |
24898210 |
atatgttcacatacacaatgcttgttgatggactatgcaaaaatggaagacttaaggatgcacaagaggtttatcgggatcttatggttaagggctatca |
24898309 |
T |
|
| Q |
358 |
ttt |
360 |
Q |
| |
|
||| |
|
|
| T |
24898310 |
ttt |
24898312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 4 - 368
Target Start/End: Complemental strand, 30577887 - 30577524
Alignment:
| Q |
4 |
gtgaatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacctctg |
103 |
Q |
| |
|
|||| |||||| || |||||||| | |||||| ||||||||||| || | || |||| | | |||||||| |||||| |||||| ||| |||| |||| |
|
|
| T |
30577887 |
gtgattctctttaaagaaatgcaattcaaaagtatgactcctgatactataacatacagtacccttattgacggacttggcaaattgggaagaatctctt |
30577788 |
T |
|
| Q |
104 |
atgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggt |
203 |
Q |
| |
|
||||||||||||||||||||||||||| || | ||||| | |||||||||||||| |||| ||||||||| ||| ||||||||||| ||| | |
|
|
| T |
30577787 |
atgtttgggatcttatagatgagatgcgtgctacaggtcggtcagctaatgtgatcacatacagttctttattaaatgttttgtgcaaaagtggtcat-t |
30577689 |
T |
|
| Q |
204 |
ttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatgg |
303 |
Q |
| |
|
|||||| |||||| | | |||| || |||||||||||| |||| || |||||||| || |||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
30577688 |
ttgacacggcaattagaatatttacaaagatcaaagacaaaggatttgagccaaatatggttacatacaatatacttgttgatggactgtgcaaaaatgg |
30577589 |
T |
|
| Q |
304 |
aagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttagatgtta |
368 |
Q |
| |
|
|||||||||||||||| ||| | ||| ||| ||||||||||||||||| |||| ||||||||||| |
|
|
| T |
30577588 |
aagacttaaggatgcacaagagatttttcatgatcttctgattaagggctatcgtttagatgtta |
30577524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 121 - 319
Target Start/End: Original strand, 29898074 - 29898267
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| | || || |||| |||| ||||| ||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
29898074 |
gatgagatgcatgatagaggtcaaccacctaatataattacgtacagttctatattgaatgctttatgcaaaaaccatcagg-ttgacaaggcaatcacg |
29898172 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
|| ||||| ||||| |||||| | ||||||||| || | | |||||||||| ||||||||||||| | || |||||||||||||| |||||||| |
|
|
| T |
29898173 |
ttgttaacaaagattaaagac----gaattcagccagatatttgtacatacacaacacttgttgatggactatggaaaaatggaagactagaggatgca |
29898267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 319
Target Start/End: Original strand, 29887294 - 29887491
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| ||||||||||| || || | || ||||||| ||||||||| |||||||| |||||||||||||||| ||||||||||||| | |
|
|
| T |
29887294 |
gatgagatgcatgatagaggtcaaccacctgatataattacttacagttctttattagatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcg |
29887392 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
|||||||| || | |||||||| ||||||| |||||| |||| |||||||| | ||| |||||||| |||| ||| ||||||||| |||||||| |
|
|
| T |
29887393 |
ttattaacaaatttgaaagaccagggtattcgaccaaatatgtacacatacactattcttattgatggactgtgtaaaggtggaagactagaggatgca |
29887491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 24730852 - 24731003
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| | || |||||||||||| ||||||||||||| |||||||||||||| | ||||||||||||| || |
|
|
| T |
24730852 |
gatgagatgcatgatagaggtcaaccacctaatataataacttacaattctatattggatgctttatgcaaaaaccatcatg-ttgacaaggcaattgca |
24730950 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacac |
273 |
Q |
| |
|
|||||||| || | |||||||| ||||||| ||| || |||| |||||||| |
|
|
| T |
24730951 |
ttattaacaaatttgaaagaccagggtattcgaccagatatgtacacatacac |
24731003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 29348561 - 29348403
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaat |
259 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| | || ||||||||||| ||||| |||| ||||| ||| || |
|
|
| T |
29348561 |
acttacaattctatattggatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcgttgttaacgaagatgaaagatgaaggaattcaaccagat |
29348463 |
T |
|
| Q |
260 |
ttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
|||| |||||||| | ||| |||||||| |||| ||| ||||||||| ||||||||| |
|
|
| T |
29348462 |
atgtacacatacactattcttattgatggattgtgtaaaggtggaagactaaaggatgca |
29348403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 30154380 - 30154507
Alignment:
| Q |
4 |
gtgaatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacctctg |
103 |
Q |
| |
|
|||| |||||| || ||||||||||||||||| |||||||| | || | || |||| ||| |||||||| || ||||||||||||||||||| ||||| |
|
|
| T |
30154380 |
gtgattctctttaaagaaatgcattccaaaagtttgactcctaatactataacatacaattcccttattgacgggctttgcaaatcggggagaatctctg |
30154479 |
T |
|
| Q |
104 |
atgtttgggatcttatagatgagatgca |
131 |
Q |
| |
|
|||||||| ||||||||||||||||||| |
|
|
| T |
30154480 |
atgtttggtatcttatagatgagatgca |
30154507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 121 - 307
Target Start/End: Original strand, 29905636 - 29905821
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| |||||||| || || || | || ||||| | |||| ||||||||||||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
29905636 |
gatgagatgcatgatagaggtcagccacctgatataattacttagagttctatattggatgctttatgcaaaaactatcaggtt-gacaaggcaatcaca |
29905734 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaaga |
307 |
Q |
| |
|
|||||||| || | ||||||| |||||||| |||||| |||| |||||||| | ||| |||||||| |||| ||| ||||||| |
|
|
| T |
29905735 |
ttattaacaaaattgaaagacctgggtattcaaccaaatatgtacacatacaccattcttattgatggattgtgtaaaggtggaaga |
29905821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 28926549 - 28926398
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| ||||||||||| || || | || ||||||| |||| ||||||||||||| |||||||||||||| | ||||||||||||| || |
|
|
| T |
28926549 |
gatgagatgcatgatagaggtcaaccacctgatataattacttacagttctctattggatgctttatgcaaaaaccatcatg-ttgacaaggcaattgca |
28926451 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacac |
273 |
Q |
| |
|
|||||||| || | |||||||| ||| |||| |||||| |||| |||||||| |
|
|
| T |
28926450 |
ttattaacaaaattgaaagaccagggtcttcaaccaaatatgtacacatacac |
28926398 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 29357981 - 29357830
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| | | ||||||| |||| ||||||||||||| |||||||||||||||| ||||||| ||||| | |
|
|
| T |
29357981 |
gatgagatgcatgatagaggtcaaccacctaatatagttacttacagttctatattggatgctttatgcaaaaaccatcagg-ttgacaatgcaattgcg |
29357883 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacac |
273 |
Q |
| |
|
|||||||| |||| ||| |||| |||||||| |||||| |||| |||||||| |
|
|
| T |
29357882 |
ttattaacacagatgaaaaaccagggtattcaaccaaatatgtacacatacac |
29357830 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 160 - 319
Target Start/End: Complemental strand, 29366384 - 29366226
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaat |
259 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||| | || ||||||||||| ||||| |||| ||||| ||| || |
|
|
| T |
29366384 |
acttacaattctatattggatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcgttgttaacgaagatgaaagatgaaggaattcaaccagat |
29366286 |
T |
|
| Q |
260 |
ttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
| | |||||||||| | | ||||||||| | |||||||||||||| || |||||||| |
|
|
| T |
29366285 |
atttgtacatacacaacattagttgatggactatgcaaaaatggaaggctagaggatgca |
29366226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 307
Target Start/End: Complemental strand, 30118743 - 30118558
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| |||||||| || || || | || ||||| | |||| ||||||||||||| ||||||||| |||||||| ||||||||||||||| |
|
|
| T |
30118743 |
gatgagatgcatgatagaggtcagccacctgatataattacttagagttctatattggatgctttatgcaaaaactatcaggtt-gacaaggcaatcaca |
30118645 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaaga |
307 |
Q |
| |
|
|||||||| || | ||||||| || ||||| |||||| |||| |||||||| | ||| |||||||| |||| ||| ||||||| |
|
|
| T |
30118644 |
ttattaacaaaattgaaagacctgggaattcaaccaaatatgtacacatacaccattcttattgatggattgtgtaaaggtggaaga |
30118558 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 158 - 367
Target Start/End: Complemental strand, 15727154 - 15726946
Alignment:
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
||||||||||||| ||| | |||||||| |||||||||||||| ||| ||||||||||| |||| | | ||| ||||||||||| || ||||| || |
|
|
| T |
15727154 |
tcacttacaattcgttaatagatgctttatgcaaaaaccatcacgtt-gacaaggcaattgtattagtcaagaaaatcaaagaccagggcattcaatcag |
15727056 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatca |
357 |
Q |
| |
|
|| |||||||||| | ||||| | |||||| | |||||| | |||||||||||||||||| ||| | ||| |||||||||| ||||||| || ||| | |
|
|
| T |
15727055 |
atatgtatacatatagtatacttatcgatggactatgcaaacaaggaagacttaaggatgcacaagtgatttttcaagatcttttgattaaaggctataa |
15726956 |
T |
|
| Q |
358 |
tttagatgtt |
367 |
Q |
| |
|
|||| ||||| |
|
|
| T |
15726955 |
tttaaatgtt |
15726946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 58 - 251
Target Start/End: Original strand, 29073697 - 29073889
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||||||| ||||||||||| | || |||||||||| || |||| ||| || | | || | |||||||||||||| |||||| ||| || || | | |
|
|
| T |
29073697 |
tacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagaggtgtaccacctgatataa |
29073796 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattc |
251 |
Q |
| |
|
| ||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| || | |||||||||||||||| |
|
|
| T |
29073797 |
ttacttacagttctatattggatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcattattaacaaaattgaaagaccaaggtattc |
29073889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 58 - 251
Target Start/End: Original strand, 29078461 - 29078653
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||||||| ||||||||||| | || |||||||||| || |||| ||| || | | || | |||||||||||||| |||||| ||| || || | | |
|
|
| T |
29078461 |
tacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagaggtgtaccacctgatataa |
29078560 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattc |
251 |
Q |
| |
|
| ||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| || | |||||||||||||||| |
|
|
| T |
29078561 |
ttacttacagttctatattggatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcattattaacaaaattgaaagaccaaggtattc |
29078653 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 58 - 251
Target Start/End: Original strand, 29106270 - 29106462
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||||||| ||||||||||| | || |||||||||| || |||| ||| || | | || | |||||||||||||| |||||| ||| || || | | |
|
|
| T |
29106270 |
tacacttctcttattgatggtttgtgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagaggtgtaccacctgatataa |
29106369 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattc |
251 |
Q |
| |
|
| ||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| || | |||||||||||||||| |
|
|
| T |
29106370 |
ttacttacagttctatattggatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcattattaacaaaattgaaagaccaaggtattc |
29106462 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 122 - 319
Target Start/End: Complemental strand, 30127056 - 30126860
Alignment:
| Q |
122 |
atgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacat |
221 |
Q |
| |
|
||||||||||||| ||||||||||| || || | || | |||||||||| ||||||||||||| |||||||||||||||| ||||||| ||||| ||| |
|
|
| T |
30127056 |
atgagatgcatgatagaggtcaaccacctgatataattatttacaattctatattggatgctttatgcaaaaaccatcagg-ttgacaaagcaattgcat |
30126958 |
T |
|
| Q |
222 |
tattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
| |||||||| | ||| |||| |||||||| |||| | |||| |||||||| | ||| |||||||| |||| ||| || |||||| |||||||| |
|
|
| T |
30126957 |
tgttaacgaaatttaaaaaccagggtattcaaccaagtgtgtacacatacactattcttattgatggattgtgtaaaggtgaaagactagaggatgca |
30126860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 58 - 226
Target Start/End: Complemental strand, 30062060 - 30061893
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| ||| ||||||||||| |||| |||||||||| || |||| ||| || | | || | |||||||||||||| ||||||||||| ||||| | | |
|
|
| T |
30062060 |
tacaattcccttattgatggtttttgtaaatcggggaaaatctcttatgctttgaagctagtcgatgagatgcatgatagaggtcaaccacctaatataa |
30061961 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattatta |
226 |
Q |
| |
|
| |||||||||||| ||||||||||||| |||||| |||||| ||||||||||||||||||||||| |
|
|
| T |
30061960 |
ttacttacaattctatattggatgctttatgcaaacgccatca-tcttgacaaggcaatcacattatta |
30061893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 319
Target Start/End: Original strand, 29866685 - 29866843
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaat |
259 |
Q |
| |
|
||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||| | |||||||| || | |||||||| ||||||| |||||| |
|
|
| T |
29866685 |
acttacagttctatattggatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcgttattaacaaatttgaaagaccagggtattcgaccaaat |
29866783 |
T |
|
| Q |
260 |
ttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
|||| |||||||| | ||| |||||||| |||| ||| ||||||||| |||||||| |
|
|
| T |
29866784 |
atgtacacatacactattcttattgatggactgtgtaaaggtggaagactagaggatgca |
29866843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 319
Target Start/End: Original strand, 29929309 - 29929467
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaat |
259 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||||| |||||||| ||||||| ||||| |||| |||||||| |||||||||| |||||||| |||| | |
|
|
| T |
29929309 |
acttacaattctatattagatgctttatgcaaaacccatcagg-ttgacaaagcaattgcattgttaacgaaattcaaagaccagggtattcaaccaagt |
29929407 |
T |
|
| Q |
260 |
ttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
|||| |||||||| | ||| |||| ||| |||| ||| ||||||||| ||||||||| |
|
|
| T |
29929408 |
gtgtacacatacactattcttattgacggattgtgtaaaggtggaagactaaaggatgca |
29929467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 198
Target Start/End: Original strand, 30029069 - 30029212
Alignment:
| Q |
55 |
acgtacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatg |
154 |
Q |
| |
|
||||||| ||| |||||| |||||||||| ||||| || |||| || |||||| ||||||||| ||||||||| ||| ||||||||| | ||||||| |
|
|
| T |
30029069 |
acgtacaattctcttatttatggactttgtaaatccggaagaatttcgtatgttttggatcttattgatgagatgtgtgatagaggtcaagcagctaatg |
30029168 |
T |
|
| Q |
155 |
tgatcacttacaattctttattggatgctttgtgcaaaaaccat |
198 |
Q |
| |
|
||||||| |||| ||| ||| |||| || ||||||||||||||| |
|
|
| T |
30029169 |
tgatcacgtacacttccttaatggacgcgttgtgcaaaaaccat |
30029212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 319
Target Start/End: Complemental strand, 29211395 - 29211198
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| | | ||||||| |||| ||||||||||||| ||||||| ||||| || ||||||||||| | || |
|
|
| T |
29211395 |
gatgagatgcatgatagaggtcaaccacctaatatagttacttacagttctatattggatgctttatgcaaaacccatc-gggttgacaaggcagttgca |
29211297 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
|||||||| || | |||||||||||||||| |||||| || | |||||||| | ||| |||||||| |||| | || ||||| ||| |||||||| |
|
|
| T |
29211296 |
ttattaacaaaattgaaagaccaaggtattcgaccaaatatgcacacatacactattcttattgatggattgtgtacaagtggaaaactggaggatgca |
29211198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 319
Target Start/End: Original strand, 29889731 - 29889924
Alignment:
| Q |
125 |
agatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattat |
224 |
Q |
| |
|
|||||||||| |||||| ||| ||||| | |||||||||||||| |||| |||||||| ||||||| |||||||| ||||||| |||| |||| | |
|
|
| T |
29889731 |
agatgcatgatagaggtgtaccacctaatatagtcacttacaattctatattagatgctttatgcaaaacccatcagg-ttgacaaaacaattgcattgt |
29889829 |
T |
|
| Q |
225 |
taacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
|||||| | |||||||| ||||||| |||||| |||| |||||||| | ||| |||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
29889830 |
caacgaaatttaaagaccagagtattcaaccaaatgtgtaaacatacactattcttattgatggattgtgcaaaggtggaagactaaaggatgca |
29889924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 29835251 - 29835399
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaat |
259 |
Q |
| |
|
||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||| | |||||||| || | |||||||| ||||||| |||||| |
|
|
| T |
29835251 |
acttacagttctatattggatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcgttattaacaaaattgaaagaccagggtattcgaccaaat |
29835349 |
T |
|
| Q |
260 |
ttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagact |
309 |
Q |
| |
|
|||| |||||||| | ||| |||||||| |||| ||| ||||||||| |
|
|
| T |
29835350 |
atgtacacatacactattcttattgatggactgtgtaaaggtggaagact |
29835399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 160 - 309
Target Start/End: Original strand, 29894589 - 29894737
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaat |
259 |
Q |
| |
|
||||||| |||| ||||||||||||| |||||||||||||||| ||||||||||||| | |||||||| || | |||||||| ||||||| |||||| |
|
|
| T |
29894589 |
acttacagttctatattggatgctttatgcaaaaaccatcagg-ttgacaaggcaattgcgttattaacaaaattgaaagaccagggtattcgaccaaat |
29894687 |
T |
|
| Q |
260 |
ttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagact |
309 |
Q |
| |
|
|||| |||||||| | ||| |||||||| |||| ||| ||||||||| |
|
|
| T |
29894688 |
atgtacacatacactattcttattgatggactgtgtaaaggtggaagact |
29894737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 24890248 - 24890097
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| |||||||| || ||||| | | ||||||| |||| ||||||||||||| |||||||||||||| | ||||||||||||| || |
|
|
| T |
24890248 |
gatgagatgcatgatagaggtcagccacctaatatagttacttacagttctatattggatgctttatgcaaaaaccatcatg-ttgacaaggcaattgca |
24890150 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacac |
273 |
Q |
| |
|
|||||||| || | |||||||| ||||||| ||| || |||| |||||||| |
|
|
| T |
24890149 |
ttattaacaaatttgaaagaccagggtattcgaccagatatgtacacatacac |
24890097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 30154564 - 30154685
Alignment:
| Q |
77 |
gactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttatt |
176 |
Q |
| |
|
|||| |||||||| || |||| | |||||| |||| ||||||||||||||||||| || ||||| ||||| ||||||||| |||| |||| ||| ||| | |
|
|
| T |
30154564 |
gactgtgcaaatctggaagaatcgctgatgcttggtatcttatagatgagatgcacgatagaggccaaccagctaatgtggtcacatacacttccttaat |
30154663 |
T |
|
| Q |
177 |
ggatgctttgtgcaaaaaccat |
198 |
Q |
| |
|
|| | |||||||||||||||| |
|
|
| T |
30154664 |
agacggtttgtgcaaaaaccat |
30154685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 30029306 - 30029422
Alignment:
| Q |
82 |
tgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatg |
181 |
Q |
| |
|
|||||||| || |||| | |||||| |||| ||||||||||||||||||| || ||||| ||||| ||||||||| |||| |||| ||| ||| | || | |
|
|
| T |
30029306 |
tgcaaatctggaagaatcgctgatgcttggtatcttatagatgagatgcacgatagaggccaaccagctaatgtggtcacatacacttccttaatagacg |
30029405 |
T |
|
| Q |
182 |
ctttgtgcaaaaaccat |
198 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
30029406 |
gtttgtgcaaaaaccat |
30029422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 319
Target Start/End: Complemental strand, 24263718 - 24263557
Alignment:
| Q |
157 |
atcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagcca |
256 |
Q |
| |
|
||||| |||| |||| |||||||||| || ||||||||||||| || ||||||||||||| ||||||||| || | |||||||| ||||||| ||| |
|
|
| T |
24263718 |
atcacgtacagttctatattggatgccttatgcaaaaaccatctgg-ttgacaaggcaattgcattattaataaaattgaaagaccagggtattcgacca |
24263620 |
T |
|
| Q |
257 |
aatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
||| |||| |||||||| | ||| |||||||| |||| ||| ||||||||| |||||||| |
|
|
| T |
24263619 |
aatatgtacacatacactattcttattgatggattgtgtaaaggtggaagactagaggatgca |
24263557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 16702211 - 16702063
Alignment:
| Q |
67 |
cttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttaca |
166 |
Q |
| |
|
|||||||||||| | |||||||| |||||| ||| ||| |||| | ||| | ||| |||||| ||| ||||| |||||| | ||||| |||||||||| |
|
|
| T |
16702211 |
cttattgatggattctgcaaatctgggagactttctcatgcttggaagcttcttgatcagatgcgtgatagaggccaacctcccaatgtaatcacttaca |
16702112 |
T |
|
| Q |
167 |
attctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaat |
216 |
Q |
| |
|
|||| ||||| ||||||| || ||||||||||| | ||||||||||||| |
|
|
| T |
16702111 |
attccttattacatgctttatgtaaaaaccatcatg-ttgacaaggcaat |
16702063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 30060164 - 30060037
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
||||||||| |||| |||||||||| || || | || |||||||||||| |||| ||||||| |||||||||||||||| ||||||||||||| || |
|
|
| T |
30060164 |
gatgagatgaatgatagaggtcaactacctgatataattacttacaattctatattaaatgctttatgcaaaaaccatcagg-ttgacaaggcaattgca |
30060066 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtat |
249 |
Q |
| |
|
|||||||| || | |||||||| ||||| |
|
|
| T |
30060065 |
ttattaacaaaattgaaagaccagggtat |
30060037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 259
Target Start/End: Complemental strand, 15715060 - 15714857
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaa---agaggtcaacctgctaatg |
154 |
Q |
| |
|
|||| ||| ||||||||||| | |||||||| |||||| ||| ||| |||||| ||| | ||| |||||||||| ||||||||||||| ||| |
|
|
| T |
15715060 |
tacagttctcttattgatggtttatgcaaatctgggagagtttctcatgcttgggagcttcttgataagatgcatgatgacagaggtcaacctgtcaata |
15714961 |
T |
|
| Q |
155 |
tgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagc |
254 |
Q |
| |
|
| ||||| |||||||| |||||| ||||||| |||||||| ||||| | ||||||||||||| | || | | |||||||||||||||||| ||| | | |
|
|
| T |
15714960 |
ttatcacatacaattccttattgcatgctttatgcaaaaatcatcacg-ttgacaaggcaattgctttggtcaagaagatcaaagaccaaggaattgaac |
15714862 |
T |
|
| Q |
255 |
caaat |
259 |
Q |
| |
|
||||| |
|
|
| T |
15714861 |
caaat |
15714857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 272
Target Start/End: Original strand, 29116297 - 29116408
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaat |
259 |
Q |
| |
|
|||||||||||| |||| |||||||| ||||||| |||||| | ||||||| ||||| |||| |||||||| | |||||| | |||||||| |||||| |
|
|
| T |
29116297 |
acttacaattctatattagatgctttatgcaaaatccatcaag-ttgacaaagcaattgcattgttaacgaaattgaaagacaagggtattcaaccaaat |
29116395 |
T |
|
| Q |
260 |
ttgtatacataca |
272 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
29116396 |
atgtacacataca |
29116408 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 193
Target Start/End: Original strand, 29876768 - 29876894
Alignment:
| Q |
67 |
cttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttaca |
166 |
Q |
| |
|
||||||||||| |||||||||||||||||| | | | || ||| ||| | |||||||||||||| ||||| ||||| ||||| | || ||||||| |
|
|
| T |
29876768 |
cttattgatggtttttgcaaatcggggagaattccacaggctttggagcttgttgatgagatgcatgatagaggccaaccacctaatataattacttaca |
29876867 |
T |
|
| Q |
167 |
attctttattggatgctttgtgcaaaa |
193 |
Q |
| |
|
||||| ||||| ||||||| ||||||| |
|
|
| T |
29876868 |
attctatattgtatgctttatgcaaaa |
29876894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 30999940 - 30999862
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatc |
199 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| | | | ||||| |||| ||||||||||||| ||||||||||||| |
|
|
| T |
30999940 |
gatgagatgcatgatagaggtcaaccacctaatatagttatttacagttctatattggatgctttatgcaaaaaccatc |
30999862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 67 - 216
Target Start/End: Complemental strand, 24272003 - 24271855
Alignment:
| Q |
67 |
cttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttaca |
166 |
Q |
| |
|
|||||||||||| | |||||||| || |||| || ||| || ||| |||| |||||||||||||| |||| |||| || || | ||||| |||| |
|
|
| T |
24272003 |
cttattgatggattgtgcaaatctggaagaatatcatatgctttggaacttaacgatgagatgcatgatcgagggcaacaacctgatataatcacgtaca |
24271904 |
T |
|
| Q |
167 |
attctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaat |
216 |
Q |
| |
|
|||| ||||||||| ||| |||||||||||||||| ||||||||||||| |
|
|
| T |
24271903 |
gttctatattggatgatttatgcaaaaaccatcagg-ttgacaaggcaat |
24271855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 29882474 - 29882561
Alignment:
| Q |
163 |
tacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattc |
251 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| ||||| | ||||||| ||||| |||||||||| || | |||| ||||||||||| |
|
|
| T |
29882474 |
tacaattctatattggatgctttatgcaaaaaacatcatg-ttgacaaagcaattgcattattaacaaaattgaaaggccaaggtattc |
29882561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 163 - 251
Target Start/End: Original strand, 29909630 - 29909717
Alignment:
| Q |
163 |
tacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattc |
251 |
Q |
| |
|
||||||||| ||||||||||||| |||||||| ||||| | ||||||| ||||| |||||||||| || | |||| ||||||||||| |
|
|
| T |
29909630 |
tacaattctatattggatgctttatgcaaaaaacatcatg-ttgacaaagcaattgcattattaacaaaattgaaaggccaaggtattc |
29909717 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 160 - 319
Target Start/End: Original strand, 29085054 - 29085212
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaat |
259 |
Q |
| |
|
|||||||||||| || | |||||||| | ||||| |||||| | ||||||| ||||| |||| ||||||| | |||||||| |||||||| |||| |
|
|
| T |
29085054 |
acttacaattctataatagatgctttattcaaaacccatcaag-ttgacaaagcaattgcattgataacgaaatttaaagaccagggtattcaaccaagc |
29085152 |
T |
|
| Q |
260 |
ttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgca |
319 |
Q |
| |
|
|||| |||||||| | ||| |||||||| |||| ||| ||||||||| ||||||||| |
|
|
| T |
29085153 |
atgtacacatacactattcttattgatggattgtgtaaaggtggaagactaaaggatgca |
29085212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 29946395 - 29946528
Alignment:
| Q |
82 |
tgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatg |
181 |
Q |
| |
|
|||| ||||||||||| ||| ||| || ||| ||| | ||||| |||||||| ||||||||||| ||||| | || |||||||| ||| ||||||||| |
|
|
| T |
29946395 |
tgcagatcggggagaatctcatatgctttggagcttgtcgatgaaatgcatgatagaggtcaaccacctaatataattacttacaactctatattggatg |
29946494 |
T |
|
| Q |
182 |
ctttgtgcaaaaaccatcaggtttgacaaggcaat |
216 |
Q |
| |
|
||| ||||| ||| || | | ||||||||||||| |
|
|
| T |
29946495 |
ttttatgcaagaactatgatg-ttgacaaggcaat |
29946528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 24886561 - 24886417
Alignment:
| Q |
127 |
atgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgac-aaggcaatcacattatt |
225 |
Q |
| |
|
|||||||| |||||||| || || || | || |||||||||||| ||||||||||||| || ||||||||||| | |||| |||||||| ||||||| |
|
|
| T |
24886561 |
atgcatgatagaggtcagccacctgatataattacttacaattctatattggatgctttatg-aaaaaccatca--tgtgacaaaggcaattgcattatt |
24886465 |
T |
|
| Q |
226 |
aacgaagatcaaagaccaaggtattcagccaaatttgtatacatacac |
273 |
Q |
| |
|
||| || | |||||||| ||||||| ||| || |||| |||||||| |
|
|
| T |
24886464 |
aacaaaattgaaagaccagggtattcgaccagatatgtacacatacac |
24886417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 58 - 375
Target Start/End: Complemental strand, 44262658 - 44262342
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||| | | ||| ||||||||| |||| | |
|
|
| T |
44262658 |
tacaattcacttattgatggactttgcaaatcaggaagaatatctgatgtttgggatcttatagatgagatgcataatataggccaacctgctgatgtta |
44262559 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
44262558 |
tcacttacaattccttattggatgctttgtgcaaaaaccatcaggtt-gacaaggcaatcacattattaacgaagatcaaagaccaaggaattcagccaa |
44262460 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatca |
357 |
Q |
| |
|
|| ||||||| ||||| |||||||||| ||| | ||||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||||| ||||| |
|
|
| T |
44262459 |
atatgtatacttacactatacttgttgacggactatgcaaaaatggaagacttaaggatgcacaagtggtttatcagaatcttcttattaagggctatca |
44262360 |
T |
|
| Q |
358 |
tttagatgttataatgta |
375 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
44262359 |
tttagatgttaaaatgta |
44262342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 151; Significance: 8e-80; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 19 - 365
Target Start/End: Original strand, 24226715 - 24227060
Alignment:
| Q |
19 |
gaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatctta |
118 |
Q |
| |
|
|||||||||||||||| ||| ||||||||| | | |||| ||| || |||||||||||||||||||| |||||| | ||||||||||||| | | |
|
|
| T |
24226715 |
gaaatgcattccaaaaatatggttcctgacactgtagcatacaattccctaattgatggactttgcaaatcaaggagaatatatgatgtttgggatttca |
24226814 |
T |
|
| Q |
119 |
tagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatca |
218 |
Q |
| |
|
||| |||||||||||| ||||||||||| ||||| | |||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
24226815 |
taggtgagatgcatgatagaggtcaaccagctaacataatcacttacaattctttattagatggattgtgcaaaaaccatcaggtt-gacaaggcaatca |
24226913 |
T |
|
| Q |
219 |
cattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgc |
318 |
Q |
| |
|
|||| |||||||||||||| | ||||| |||| ||||||| | ||||||||||| |||||||||||||| ||||||||||||||||||||| |||||| |
|
|
| T |
24226914 |
cattgttaacgaagatcaagaatcaaggaattcggccaaatatctatacatacactatacttgttgatggactgtgcaaaaatggaagacttagggatgc |
24227013 |
T |
|
| Q |
319 |
aaaagcggtttatcaagatcttctgattaagggatatcatttagatg |
365 |
Q |
| |
|
| ||| ||||||||| |||||||||| ||| || ||||| ||||||| |
|
|
| T |
24227014 |
acaagaggtttatcaggatcttctgaataaaggctatcagttagatg |
24227060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 24219303 - 24219143
Alignment:
| Q |
55 |
acgtacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatg |
154 |
Q |
| |
|
||||||| ||| ||||||||||| | ||||||||||| |||| ||| ||| || | | ||||| | ||||||||||| ||||||||||| ||||| |
|
|
| T |
24219303 |
acgtacaattcccttattgatggtttgtgcaaatcgggaagaatctcatatgctttgaaacttatcggagagatgcatgatagaggtcaaccacctaata |
24219204 |
T |
|
| Q |
155 |
tgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaat |
216 |
Q |
| |
|
| || |||||||||||||||||||||||||| |||||||||||||| | ||||||||||||| |
|
|
| T |
24219203 |
taattacttacaattctttattggatgctttatgcaaaaaccatcatg-ttgacaaggcaat |
24219143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 135; Significance: 3e-70; HSPs: 1)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 7 - 365
Target Start/End: Complemental strand, 43985 - 43628
Alignment:
| Q |
7 |
aatctcttaaatgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacctctgatg |
106 |
Q |
| |
|
|||||||| || |||||||||||||||| ||| |||| |||| | || |||| ||| | ||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
43985 |
aatctcttcaaagaaatgcattccaaaaatatggttcctaacactgtaacatacaattccttaattgatggactttgcaaattagggagaatgtctgatg |
43886 |
T |
|
| Q |
107 |
tttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttg |
206 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||| || || | |||||||||| ||||||||| |||| ||||||||||||||||||| ||| |
|
|
| T |
43885 |
cttgggattttatagatgagatgcatgatagaggtcaaccagcgaacattatcacttacagttctttattagatggattgtgcaaaaaccatcagg-ttg |
43787 |
T |
|
| Q |
207 |
acaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaag |
306 |
Q |
| |
|
||||||||||||| || |||||||||||||| ||||||| ||||||| | || | ||||||||||| |||||||||||||| ||||||||||||||| |
|
|
| T |
43786 |
acaaggcaatcactttgttaacgaagatcaagaaccaaggaattcagctagatatctatacatacactatacttgttgatggactgtgcaaaaatggaaa |
43687 |
T |
|
| Q |
307 |
acttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttagatg |
365 |
Q |
| |
|
||||| ||||||| ||| ||||||||| | |||||||| ||| ||||||||||||| |
|
|
| T |
43686 |
acttagggatgcacaagaggtttatcaggttcttctgaataacacctatcatttagatg |
43628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 171 - 365
Target Start/End: Original strand, 9782586 - 9782779
Alignment:
| Q |
171 |
tttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacata |
270 |
Q |
| |
|
||||||||||||||||||||||| |||||||||| ||||||||||| | || ||||| ||||| |||||| |||| ||||||||| || ||| |||||| |
|
|
| T |
9782586 |
tttattggatgctttgtgcaaaatccatcaggtt-gacaaggcaattgcgttgttaacaaagatgaaagacgaaggaattcagccagatatgtgtacata |
9782684 |
T |
|
| Q |
271 |
cacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaagggatatcatttagatg |
365 |
Q |
| |
|
||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||| |||||| || ||||||||||||| |
|
|
| T |
9782685 |
cactatacttgttgatggactgtgcaaaaatggaagacttaaggatgcacaaagggtttatcgggatcttacgattaaaggttatcatttagatg |
9782779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 77; Significance: 1e-35; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 58 - 310
Target Start/End: Original strand, 8651200 - 8651450
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| |||||||||| |||||||||||||||||| || || | || ||||| ||||||||||||||| |||||||| ||| |||||| ||| | | | |
|
|
| T |
8651200 |
tacagttcgcttattcatggactttgcaaatcggagaaaatatatgttgttttggatcttatagatga-atgcatgatagatgtcaacaagctgacataa |
8651298 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
||||||||| ||||||||| ||||| |||| |||||||||| |||||| ||| |||||| ||||||| | ||||||||||||||| | ||| | ||| |
|
|
| T |
8651299 |
tcacttacacttctttatttgatgcattgttcaaaaaccataaggttt-acatggcaattgcattattgaagaagatcaaagaccatagaattgaaccat |
8651397 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagactt |
310 |
Q |
| |
|
|| ||| | ||||||| |||||||||||||| | |||||||||||||||||| |
|
|
| T |
8651398 |
atatgttcatatacacactacttgttgatggactatgcaaaaatggaagactt |
8651450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 13093598 - 13093463
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||| | |||| || ||||||||| |||| ||| ||||||||||| || |||| |||||| | | | || | |
|
|
| T |
13093598 |
tacaattcacttattgatggactttgcaaatcagagagattctatgatgtttgtgatc-tatggatgagatgcacgatagagatcaaccagatgacgtta |
13093500 |
T |
|
| Q |
158 |
tcacttacaattc-tttattggatgctttgtgcaaaa |
193 |
Q |
| |
|
|||||||| ||| ||| || |||||||||||||||| |
|
|
| T |
13093499 |
tcacttacggttcttttgttagatgctttgtgcaaaa |
13093463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 25861967 - 25862015
Alignment:
| Q |
152 |
atgtgatcacttacaattctttattggatgctttgtgcaaaaaccatca |
200 |
Q |
| |
|
|||| |||||||| |||||||||||| ||||||| |||||||| ||||| |
|
|
| T |
25861967 |
atgtaatcacttataattctttattgcatgctttatgcaaaaatcatca |
25862015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 121 - 311
Target Start/End: Original strand, 17251310 - 17251499
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcaca |
220 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||||| || ||||||| |||||| | |||||||||||||||| |||||| | |||| |||||||| || |
|
|
| T |
17251310 |
gatgagatgcatgatagaggtcaaccacctaatgtaataacttacacttctttgatagatgctttgtgcaaaagccatcaag-ttgataaggcaattgca |
17251408 |
T |
|
| Q |
221 |
ttattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagactta |
311 |
Q |
| |
|
||| ||| ||| || ||||| |||||||||||| ||||| |||||||||||| |||||||||||||| | |||||| |||| ||||||| |
|
|
| T |
17251409 |
ttactaaagaaaattaaagatcaaggtattcaggcaaatatgtatacatacaatatacttgttgatggactttgcaaagatggtagactta |
17251499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 342
Target Start/End: Original strand, 10130080 - 10130354
Alignment:
| Q |
67 |
cttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttaca |
166 |
Q |
| |
|
||||||||||| | |||||||| ||||||| ||| |||| |||||| ||| || ||||||| ||| |||||||||| ||||| | || ||||||| |
|
|
| T |
10130080 |
cttattgatggcttgtgcaaatcagggagaatctcagatgcttgggaacttgtaagtgagatgtctgatagaggtcaacaacctaatataattacttaca |
10130179 |
T |
|
| Q |
167 |
attctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaatttgtata |
266 |
Q |
| |
|
||||||||||| ||||||| ||| |||| || || | ||||||| |||||| |||| |||| || | ||| |||||||||||| |||| ||| | || |
|
|
| T |
10130180 |
attctttattgaatgctttatgccaaaatcaccatg-ttgacaaagcaatcgcattgttaagaaaatttaaaacccaaggtattcaaccaactttatgta |
10130278 |
T |
|
| Q |
267 |
catacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttct |
342 |
Q |
| |
|
|||| || | ||| | | ||| | |||| | |||||| |||||||||||| ||| ||||| |||||||||||| |
|
|
| T |
10130279 |
catatactattcttatcaagggactatgcatgagtggaaggcttaaggatgcacaagtggtttttcaagatcttct |
10130354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0572 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0572
Description:
Target: scaffold0572; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 17 - 348
Target Start/End: Original strand, 3126 - 3456
Alignment:
| Q |
17 |
atgaaatgcattccaaaagaatgactcctgacacattcacgtacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatct |
116 |
Q |
| |
|
||||||||| || || |||||| ||||||| || | || |||| ||| || |||||||| | |||||||| ||||||| ||| ||| |||||| || |
|
|
| T |
3126 |
atgaaatgcgttgcagaagaattgctcctgatacggtaacttacaattctctaattgatggtttgtgcaaatctgggagaatctcctatgcttgggagct |
3225 |
T |
|
| Q |
117 |
tatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaat |
216 |
Q |
| |
|
| | |||||||||| ||| || |||||||| ||| || | |||||||||||||| ||| | |||||||| |||||||||||||| | |||||||||| || |
|
|
| T |
3226 |
tgttgatgagatgcgtgatagtggtcaaccagctgatataatcacttacaattcattaatagatgctttatgcaaaaaccatcatg-ttgacaaggctat |
3324 |
T |
|
| Q |
217 |
cacattattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggat |
316 |
Q |
| |
|
||||| | | ||| || ||||||||||| ||||| | | || |||| ||||||| ||||| | |||||| | |||||| | ||||| ||||||||| |
|
|
| T |
3325 |
tgcattagtcaagaaaattaaagaccaaggcattcaactagatatgtacacatacaatatacttatcgatggactatgcaaacaaggaaggcttaaggat |
3424 |
T |
|
| Q |
317 |
gcaaaagcggtttatcaagatcttctgattaa |
348 |
Q |
| |
|
||| ||| | ||| ||| |||||| ||||||| |
|
|
| T |
3425 |
gcacaagtgatttttcaggatcttttgattaa |
3456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0573 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0573
Description:
Target: scaffold0573; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 4134 - 4285
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccat-caggtttgacaaggcaatcac |
219 |
Q |
| |
|
|||||||||||||| ||||||||||| || || | || ||||||| |||| ||||||||||||| |||||||||||| |||| |||||||||||| | |
|
|
| T |
4134 |
gatgagatgcatgatagaggtcaaccacctgatataattacttacagttctctattggatgctttatgcaaaaaccatccagg--tgacaaggcaattgc |
4231 |
T |
|
| Q |
220 |
attattaacgaagatcaaagaccaaggtattcagccaaatttgtatacatacac |
273 |
Q |
| |
|
||||||||| || | |||||||| ||| |||| |||||| |||| |||||||| |
|
|
| T |
4232 |
attattaacaaaattgaaagaccagggtcttcaaccaaatatgtacacatacac |
4285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 121521 - 121388
Alignment:
| Q |
82 |
tgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatg |
181 |
Q |
| |
|
|||||||| ||||||| |||| ||| ||||| ||| | ||| |||||||||| |||||||||||||| ||| | ||||| |||||||| |||||| ||| |
|
|
| T |
121521 |
tgcaaatcagggagaatctctcatgcatgggagcttcttgatcagatgcatgatagaggtcaacctgccaatattatcacatacaattccttattgcatg |
121422 |
T |
|
| Q |
182 |
ctttgtgcaaaaaccatcaggtttgacaaggcaat |
216 |
Q |
| |
|
|||| |||||||| ||||| | ||||||||||||| |
|
|
| T |
121421 |
ctttatgcaaaaatcatcaag-ttgacaaggcaat |
121388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0429 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0429
Description:
Target: scaffold0429; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 159 - 348
Target Start/End: Original strand, 6231 - 6419
Alignment:
| Q |
159 |
cacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaaa |
258 |
Q |
| |
|
|||||||||||||||| | ||||| || |||||||||||||| ||| |||||||| || |||| | | ||| || ||||||||||| ||||| | ||| |
|
|
| T |
6231 |
cacttacaattctttaatagatgcattatgcaaaaaccatcatgtt-gacaaggctattgtattagtcaagaaaattaaagaccaaggcattcaactaaa |
6329 |
T |
|
| Q |
259 |
tttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatcttctgattaa |
348 |
Q |
| |
|
| |||| ||||||| ||||| | |||||| | |||||| | ||||| |||||||||||| ||| | ||| ||| |||||| ||||||| |
|
|
| T |
6330 |
tatgtacacatacaatatacttatcgatggactatgcaaacaaggaaggcttaaggatgcacaagtgatttttcaggatcttttgattaa |
6419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0654 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0654
Description:
Target: scaffold0654; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 1218 - 1128
Alignment:
| Q |
125 |
agatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaat |
216 |
Q |
| |
|
|||||||||| |||||||||| ||| |||||||||||||||||||| || || | ||||| || ||||||||||| | ||||||||||||| |
|
|
| T |
1218 |
agatgcatgatagaggtcaacatgcaaatgtgatcacttacaattccttcttacacgctttatgtaaaaaccatcaag-ttgacaaggcaat |
1128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0652
Description:
Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 1336 - 1203
Alignment:
| Q |
82 |
tgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatg |
181 |
Q |
| |
|
|||||||| ||||||| ||| ||| ||||| ||| | ||| |||||||||| |||||||||||||| ||||||||||||||||||| || || | | |
|
|
| T |
1336 |
tgcaaatcagggagaatttctcatgcatgggagcttcttgatcagatgcatgatagaggtcaacctgccgatgtgatcacttacaattccttcttacacg |
1237 |
T |
|
| Q |
182 |
ctttgtgcaaaaaccatcaggtttgacaaggcaat |
216 |
Q |
| |
|
|||| || ||||| ||||| | ||||||||||||| |
|
|
| T |
1236 |
ctttatgtaaaaatcatcaag-ttgacaaggcaat |
1203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0308 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0308
Description:
Target: scaffold0308; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 58 - 340
Target Start/End: Original strand, 8929 - 9210
Alignment:
| Q |
58 |
tacacttcgcttattgatggactttgcaaatcggggagaacctctgatgtttgggatcttatagatgagatgcatgaaagaggtcaacctgctaatgtga |
157 |
Q |
| |
|
|||| ||| ||||||||||| | |||||||| ||||||| ||| ||| |||||| | | |||||||||||||| |||||||||||||| ||||| | |
|
|
| T |
8929 |
tacagttctcttattgatggtttgtgcaaatcagggagaatttctcatgcttgggagttgcttgatgagatgcatgatagaggtcaacctgccaatgtaa |
9028 |
T |
|
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
|||||| || ||| ||||| | ||| | || ||||||| ||| | ||||||||||||| ||| | | ||| | ||||||| || ||||| |||| |
|
|
| T |
9029 |
tcactttcagttcattattacacgctctatgtaaaaaccgtcatg-ttgacaaggcaattgaattggtcaagaaacttaaagaccgagacattcaaccaa |
9127 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaaaatggaagacttaaggatgcaaaagcggtttatcaagatctt |
340 |
Q |
| |
|
|| |||| ||||||| ||||| | |||||| | |||||| | |||||||||||||| ||| ||| | ||| |||||||||| |
|
|
| T |
9128 |
atatgtacacatacaatatacttatcgatggactatgcaaacaaggaagacttaaggacgcacaagtgatttttcaagatctt |
9210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0237 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0237
Description:
Target: scaffold0237; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 160 - 251
Target Start/End: Original strand, 22379 - 22469
Alignment:
| Q |
160 |
acttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattc |
251 |
Q |
| |
|
|||||||||||| ||||||||||||| |||||||| ||||| | | ||||| ||||| ||||||||||| || | |||| ||||||||||| |
|
|
| T |
22379 |
acttacaattctatattggatgctttatgcaaaaaacatcatg-tggacaaagcaattacattattaacaaaattgaaaggccaaggtattc |
22469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0019 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0019
Description:
Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 298
Target Start/End: Complemental strand, 126088 - 125949
Alignment:
| Q |
158 |
tcacttacaattctttattggatgctttgtgcaaaaaccatcaggtttgacaaggcaatcacattattaacgaagatcaaagaccaaggtattcagccaa |
257 |
Q |
| |
|
||||||||||||| ||| | |||||||| |||||||||||||| | |||||||||| || ||||| | | ||| |||||||| ||||| ||||| ||| |
|
|
| T |
126088 |
tcacttacaattccttaatagatgctttatgcaaaaaccatca-gattgacaaggctattgcattagttaagaaaatcaaagatcaaggcattcaaccag |
125990 |
T |
|
| Q |
258 |
atttgtatacatacacattacttgttgatggaatgtgcaaa |
298 |
Q |
| |
|
|| ||| ||||||| ||||| |||||||| | |||||| |
|
|
| T |
125989 |
atatgtgcacatacaatatacttattgatggactatgcaaa |
125949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 121 - 200
Target Start/End: Complemental strand, 15062878 - 15062799
Alignment:
| Q |
121 |
gatgagatgcatgaaagaggtcaacctgctaatgtgatcacttacaattctttattggatgctttgtgcaaaaaccatca |
200 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||| | || |||||||||||| |||| |||||| | ||||||||| |||| |
|
|
| T |
15062878 |
gatgaaatgcatgatagaggtcaaccatctaatataattacttacaattctatattagatgctatatgcaaaaacaatca |
15062799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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