View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15888_high_13 (Length: 307)
Name: NF15888_high_13
Description: NF15888
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15888_high_13 |
 | |
|
| [»] chr3 (11 HSPs) |
| |
|
| [»] scaffold0029 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 16 - 307
Target Start/End: Complemental strand, 31252700 - 31252409
Alignment:
| Q |
16 |
aataaaacaataaaaagttaacaaagaaagaaaataattgctccacacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatca |
115 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
31252700 |
aataaaacaataaaaagttaacaaggaaagaaaataattgctccacacaccatactgttgaggtgtttgatataaacgcttggcatcgttgtaataatca |
31252601 |
T |
|
| Q |
116 |
aaatatactatcttagcttgagggtgtttctgttttattgtctctatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatca |
215 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31252600 |
aaatatactatcttagcttgagggtgtttctgttttattgtctctatggatttttttagctgctcattaaagtattcaatgagagtgttgtaagctatca |
31252501 |
T |
|
| Q |
216 |
aacatccaaattcatcatagtcttctttcttctgactaatcttttttgacaatatgtcagtattacaccccattggaaagttccctggaacc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31252500 |
aacatccaaattcatcatagtcttctttcttctgactaatcttttttgacaatatgtcagtattacaccccattggaaagttccctggaacc |
31252409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 20 - 307
Target Start/End: Original strand, 13002890 - 13003177
Alignment:
| Q |
20 |
aaacaataaaaagttaacaaagaaagaaaataattgctccacacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaat |
119 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13002890 |
aaacaataaaaagttaacaaggaaagaaaataattgctccacacaccatattgttgtggtgtttgatataaacgcttggcatcgttgtaataatcaaaat |
13002989 |
T |
|
| Q |
120 |
atactatcttagcttgagggtgtttctgttttattgtctctatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaaca |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13002990 |
atactatcttagcttgagggtgtttctgttttattgtctctatggatttttttagctgctcattaaagtattcaatgagagtgttgtaagctatcaaaca |
13003089 |
T |
|
| Q |
220 |
tccaaattcatcatagtcttctttcttctgactaatcttttttgacaatatgtcagtattacaccccattggaaagttccctggaacc |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13003090 |
tccaaattcatcatagtcttctttcttctgactaatcttttttgacaatatgtcagtattacaccccattggaaagttccctggaacc |
13003177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 17 - 307
Target Start/End: Original strand, 31093687 - 31093977
Alignment:
| Q |
17 |
ataaaacaataaaaagttaacaaagaaagaaaataattgctccacacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaa |
116 |
Q |
| |
|
||||| |||| |||| |||||| ||||||||||||| ||||||| ||||||| |||||||||| |||||||||||| |||||||||||||| || |||| |
|
|
| T |
31093687 |
ataaatcaatgaaaacttaacatggaaagaaaataatggctccacgcaccatattgttgtggtgcttgatataaacgtttggcatcgttgtaatagtcaa |
31093786 |
T |
|
| Q |
117 |
aatatactatcttagcttgagggtgtttctgttttattgtctctatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaa |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
31093787 |
aatatactatcttagcttgagggtgtttctgttttattatctctatggatttttttagctgctcattaaagtattcgatgaaagtgttgtaagctatcaa |
31093886 |
T |
|
| Q |
217 |
acatccaaattcatcatagtcttctttcttctgactaatcttttttgacaatatgtcagtattacaccccattggaaagttccctggaacc |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||| |
|
|
| T |
31093887 |
acatccaaattcatcatagtcttctttcttctgactaatcttttttgacaatatgtcagtattacaccctattggaaagtttcctgaaacc |
31093977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 33 - 307
Target Start/End: Complemental strand, 16163373 - 16163099
Alignment:
| Q |
33 |
ttaacaaagaaagaaaataattgctccacacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagc |
132 |
Q |
| |
|
||||||| ||| ||||||||||||||||| |||||| |||||||||| || ||||||||| ||||||||||||||||| |||||||||| ||||||||| |
|
|
| T |
16163373 |
ttaacaaggaagtaaaataattgctccacagaccatattgttgtggtgcttcatataaacgtttggcatcgttgtagtagtcaaaatatattatcttagc |
16163274 |
T |
|
| Q |
133 |
ttgagggtgtttctgttttattgtctctatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatca |
232 |
Q |
| |
|
|||||| |||||||| || |||||||||||| || ||||||||||||||||| |||| || |||||||||||| |||||||||||||||||| |
|
|
| T |
16163273 |
ttgaggatgtttctgccgtaatgtctctatggatttttttagttgctcattaaagtattcgatgaaagagttgtaagctattaaacatccaaattcatca |
16163174 |
T |
|
| Q |
233 |
tagtcttctttcttctgactaatcttttttgacaatatgtcagtattacaccccattggaaagttccctggaacc |
307 |
Q |
| |
|
|| || |||||||| || ||||||||||||| |||||||||| |||||| |||||||||||||| ||||||||| |
|
|
| T |
16163173 |
taatcctctttcttttggctaatcttttttgtcaatatgtcaacattacatcccattggaaagttacctggaacc |
16163099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 41 - 301
Target Start/End: Complemental strand, 27206703 - 27206442
Alignment:
| Q |
41 |
gaaagaaaataattgctccacacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggt |
140 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||| ||||| ||| |||||||| ||| |||| ||||| ||||| |||||||||||||||||||||| |
|
|
| T |
27206703 |
gaaagaaaataattgctccacac-ccatattgttctggtgcttggtataaacgtttgacatcattgtaaacgtcaaagtatactatcttagcttgagggt |
27206605 |
T |
|
| Q |
141 |
gtttctgttttattgtctctatggannnnnnnagctgctc--attaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtct |
238 |
Q |
| |
|
|||| || ||| ||||| |||||| || | | ||||||||||| |||| || |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
27206604 |
gtttatgccttagtgtctttatggattttttaagttttttttattaaagtattttatgaaagagttgtatgctatcaaacatccaaatttatcatagtct |
27206505 |
T |
|
| Q |
239 |
tctttcttctgactaatcttttttgacaatatgtcagtattacaccccattggaaagttccct |
301 |
Q |
| |
|
|||||||||||||||||||| |||||||||| || || | |||| || ||||| ||||||||| |
|
|
| T |
27206504 |
tctttcttctgactaatcttatttgacaataagtgagcagtacatcctattgggaagttccct |
27206442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 42 - 307
Target Start/End: Complemental strand, 27229361 - 27229096
Alignment:
| Q |
42 |
aaagaaaataattgctccacacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtg |
141 |
Q |
| |
|
||||||||||||| |||| || | |||| |||||||||| |||||||||||| ||| || ||||||| ||||| |||| |||| |||||||| ||| |
|
|
| T |
27229361 |
aaagaaaataattactccgcatatcatattgttgtggtgattgatataaacgtttgacaatattgtagtggtcaaagtatattatcctagcttgatagtg |
27229262 |
T |
|
| Q |
142 |
tttctgttttattgtctctatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttct |
241 |
Q |
| |
|
||| ||||||| |||||||| | || ||||||||| ||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
27229261 |
tttttgttttaacgtctctatatattttttgagttgctcattatagtattcgatgaaagtgttgtaagttatcaaacatccaaattcatcataatcttct |
27229162 |
T |
|
| Q |
242 |
ttcttctgactaatcttttttgacaatatgtcagtattacaccccattggaaagttccctggaacc |
307 |
Q |
| |
|
|||||||||||| || | |||||||| | ||||||||| ||||||||||| ||||||||| |
|
|
| T |
27229161 |
ttcttctgactattcaccctccacaatatgccgacattacaccctattggaaagtttcctggaacc |
27229096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 297
Target Start/End: Complemental strand, 25658762 - 25658525
Alignment:
| Q |
60 |
acacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctc |
159 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||||| ||| ||| ||| |||||| |
|
|
| T |
25658762 |
acacaccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgagggtatttatgtcttaatgtctc |
25658663 |
T |
|
| Q |
160 |
tatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttctgactaatcttt |
259 |
Q |
| |
|
||| || || || ||||| ||||||| || || ||||||||||||| || |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
25658662 |
tatagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaa |
25658563 |
T |
|
| Q |
260 |
tttgacaatatgtcagtattacaccccattggaaagtt |
297 |
Q |
| |
|
|||| ||| | ||| ||||||||| ||||||||||| |
|
|
| T |
25658562 |
tttgtcaacacaccagcattacacccaattggaaagtt |
25658525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 297
Target Start/End: Complemental strand, 25665167 - 25664930
Alignment:
| Q |
60 |
acacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctc |
159 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||||| ||| ||| ||| |||||| |
|
|
| T |
25665167 |
acacaccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgagggtatttatgtcttaatgtctc |
25665068 |
T |
|
| Q |
160 |
tatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttctgactaatcttt |
259 |
Q |
| |
|
||| || || || ||||| ||||||| || || ||||||||||||| || |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
25665067 |
tatagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaa |
25664968 |
T |
|
| Q |
260 |
tttgacaatatgtcagtattacaccccattggaaagtt |
297 |
Q |
| |
|
|||| ||| | ||| ||||||||| ||||||||||| |
|
|
| T |
25664967 |
tttgtcaacacaccagcattacacccaattggaaagtt |
25664930 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 297
Target Start/End: Complemental strand, 25671572 - 25671335
Alignment:
| Q |
60 |
acacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctc |
159 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||||| ||| ||| ||| |||||| |
|
|
| T |
25671572 |
acacaccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgagggtatttatgtcttaatgtctc |
25671473 |
T |
|
| Q |
160 |
tatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttctgactaatcttt |
259 |
Q |
| |
|
||| || || || ||||| ||||||| || || ||||||||||||| || |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
25671472 |
tatagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaa |
25671373 |
T |
|
| Q |
260 |
tttgacaatatgtcagtattacaccccattggaaagtt |
297 |
Q |
| |
|
|||| ||| | ||| ||||||||| ||||||||||| |
|
|
| T |
25671372 |
tttgtcaacacaccagcattacacccaattggaaagtt |
25671335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 297
Target Start/End: Complemental strand, 25677977 - 25677740
Alignment:
| Q |
60 |
acacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctc |
159 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||||| ||| ||| ||| |||||| |
|
|
| T |
25677977 |
acacaccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgagggtatttatgtcttaatgtctc |
25677878 |
T |
|
| Q |
160 |
tatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttctgactaatcttt |
259 |
Q |
| |
|
||| || || || ||||| ||||||| || || ||||||||||||| || |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
25677877 |
tatagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaa |
25677778 |
T |
|
| Q |
260 |
tttgacaatatgtcagtattacaccccattggaaagtt |
297 |
Q |
| |
|
|||| ||| | ||| ||||||||| ||||||||||| |
|
|
| T |
25677777 |
tttgtcaacacaccagcattacacccaattggaaagtt |
25677740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 297
Target Start/End: Complemental strand, 25684653 - 25684416
Alignment:
| Q |
60 |
acacaccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctc |
159 |
Q |
| |
|
|||||||||| || |||||||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||||||||| ||| ||| ||| |||||| |
|
|
| T |
25684653 |
acacaccatattgctgtggtgtttgatataaacgtttgagattgttgtagtagtcaaaatatattatcttagcttgagggtatttatgtcttaatgtctc |
25684554 |
T |
|
| Q |
160 |
tatggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttcttctgactaatcttt |
259 |
Q |
| |
|
||| || || || ||||| ||||||| || || ||||||||||||| || |||| |||||||||||||||||||||| ||||||| |
|
|
| T |
25684553 |
tatagaatttttaagttgttcattgtagtattcggcgaaagcattgtaagctatcaggcacccaagttcatcatagtcttctttcttcgtactaatcaaa |
25684454 |
T |
|
| Q |
260 |
tttgacaatatgtcagtattacaccccattggaaagtt |
297 |
Q |
| |
|
|||| ||| | ||| ||||||||| ||||||||||| |
|
|
| T |
25684453 |
tttgtcaacacaccagcattacacccaattggaaagtt |
25684416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0029
Description:
Target: scaffold0029; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 18364 - 18547
Alignment:
| Q |
63 |
caccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctctat |
162 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| |||||||| || ||||| ||||| |||| ||||||| ||| |||||| |||||| ||| ||||||||| |
|
|
| T |
18364 |
caccatattgttgcggtgtttgatataaacgtttggcatcattatagtagtcaaagtatattatcttaacttcagggtgcttctgtcttagtgtctctat |
18463 |
T |
|
| Q |
163 |
ggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttctt |
246 |
Q |
| |
|
|| || ||| | |||||||| || || | | | ||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
18464 |
agaattttttagttgcccgttaaagtactctattaaattattgtaagctattaagcacccaaattcatcatagtcttctttctt |
18547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0029; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 43376 - 43559
Alignment:
| Q |
63 |
caccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctctat |
162 |
Q |
| |
|
||||||| ||||| |||||||||||||||| |||||||| || ||||| ||||| |||| ||||||| ||| |||||| |||||| ||| ||||||||| |
|
|
| T |
43376 |
caccatattgttgcggtgtttgatataaacatttggcatcattatagtagtcaaagtatattatcttaacttcagggtgcttctgtcttagtgtctctat |
43475 |
T |
|
| Q |
163 |
ggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttctt |
246 |
Q |
| |
|
|| || ||| | |||||||| || || | | | ||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
43476 |
agaattttttagttgcccgttaaagtactctattaaattattgtaagctattaagcacccaaattcatcatagtcttctttctt |
43559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 33120609 - 33120792
Alignment:
| Q |
63 |
caccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctctat |
162 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| |||||||| || ||||| ||||| |||| ||||||| ||| |||||| |||||| ||| ||||||||| |
|
|
| T |
33120609 |
caccatattgttgcggtgtttgatataaacgtttggcatcattatagtagtcaaagtatattatcttaacttcagggtgcttctgtcttagtgtctctat |
33120708 |
T |
|
| Q |
163 |
ggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttctt |
246 |
Q |
| |
|
|| || ||| |||||||||| || | | | | ||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
33120709 |
agaattttttagttgcccattaaagtactcgactaaattattgtaagctattaagcacccaaattcatcatagtcttctttctt |
33120792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 246
Target Start/End: Original strand, 33130352 - 33130535
Alignment:
| Q |
63 |
caccatactgttgtggtgtttgatataaacgcttggcatcgttgtagtaatcaaaatatactatcttagcttgagggtgtttctgttttattgtctctat |
162 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| |||||||| || ||||| ||||| |||| ||||||| ||| |||||| |||||| ||| ||||||||| |
|
|
| T |
33130352 |
caccatattgttgcggtgtttgatataaacgtttggcatcattatagtagtcaaagtatattatcttaacttcagggtgcttctgtcttagtgtctctat |
33130451 |
T |
|
| Q |
163 |
ggannnnnnnagctgctcattaaagtattcaatgagagtgttgtaagctatcaaacatccaaattcatcatagtcttctttctt |
246 |
Q |
| |
|
|| || ||| |||||||||| || | | | | ||||||||||| || || |||||||||||||||||||||||||| |
|
|
| T |
33130452 |
agaattttttagttgcccattaaagtactcgactaaattattgtaagctattaagcacccaaattcatcatagtcttctttctt |
33130535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University