View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1588_low_8 (Length: 220)
Name: NF1588_low_8
Description: NF1588
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1588_low_8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 64 - 220
Target Start/End: Complemental strand, 29296300 - 29296144
Alignment:
| Q |
64 |
aagcctccctccgtaatccattcccatcggaactactaccaccaacacgcgacttcttagaagaaaggccacacaaaagaagacgcattaaacaatccca |
163 |
Q |
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| T |
29296300 |
aagcctccctccgtaatccattcccatcggaactactaccaccaacacgcgacttcttagaagaaagaccacacaaaagaagacgcattaaacaatccca |
29296201 |
T |
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| Q |
164 |
aaagaaatcactcatcaacaacttcgaacttcaaccacacgtcacaaagattctccg |
220 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
29296200 |
aaagaaatcactcatcaacaacttcgaacttcaaccacatgtcacaaagattctccg |
29296144 |
T |
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