View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15891_high_6 (Length: 312)
Name: NF15891_high_6
Description: NF15891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15891_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 37091251 - 37090965
Alignment:
| Q |
10 |
aagaatatgaagatctaaatgttgtgaatgacctcgtgatctagatccataagaataagaaagtgaccacattcaataaatacacatcaatatatctaga |
109 |
Q |
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| T |
37091251 |
aagaaaatgaagatctaaatgttgtgaatgaccttgtgatctagatccataagaataagaaagtgaccacattcaataaatacacatcaatatatctaga |
37091152 |
T |
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| Q |
110 |
tctgaatcaagtgcttaattaaaaggattatgtctatatgcatcatgaaaatgtatatggtttgtaaggaaaataatgatgaatatagatccttttgtta |
209 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37091151 |
tctgaatcaagtgcttaattaaaaggcttatgtctatatgcatcatgaaaatgtaaatggtttgtaaggaaaataatgatgaatatagatccttttgtta |
37091052 |
T |
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| Q |
210 |
taccttgcaagaaccatctgtttgaacatttccaagcctcttgatttcttccctcagcttttcaacctcctcttctacgttcatctt |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37091051 |
taccttgcaagaaccatctgtttgaacatttccaagcctcttgatttcttccctcagcttttcaacctcctcttctacgttcatctt |
37090965 |
T |
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