View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15891_low_8 (Length: 230)
Name: NF15891_low_8
Description: NF15891
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15891_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 36827218 - 36827444
Alignment:
| Q |
1 |
tccatacctgtacatatttgatgatgattctgatggaactgagtagattcctctttgttctatttttctcatttgtttgttgtaatcctcgaaaggcgcg |
100 |
Q |
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| T |
36827218 |
tccatacctgtacatatttgatgatgactctgatggaactgagtagattcctttttgttctatttttctcatttgtttgttgtaatcctcgaaaggcgcg |
36827317 |
T |
|
| Q |
101 |
gtggtaaattttacatatgtgaaagagcgatattatgggttaggatcctctctagttacagtacagttccctgtccaagggcctgaagttgtgaacataa |
200 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36827318 |
gtggtaaattttacatatatgaaagagcgatattatgggttaggatcctctctagttacagtacagttccctgtccaagggcctgaagttgtgaacataa |
36827417 |
T |
|
| Q |
201 |
acttttaatgggttagtattatgtagc |
227 |
Q |
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|||||||||||||| |||||||||||| |
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| T |
36827418 |
acttttaatgggttggtattatgtagc |
36827444 |
T |
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