View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15894_high_21 (Length: 249)
Name: NF15894_high_21
Description: NF15894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15894_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 30762466 - 30762707
Alignment:
| Q |
1 |
tattcacaagctaattcaaatgcattcgtgtttaagatttaaaagaaaaaatttgagcttaaagtggggattgcattaattcatctgtcttttatttaat |
100 |
Q |
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| T |
30762466 |
tattcagaagctaattcaaatgcattcgtgtttaagatttaaaagaaaaaatttgagcttaaagtggggattgcattaattcatctgtcttttatttaat |
30762565 |
T |
|
| Q |
101 |
gaataaaaatcaagatatcatccctnnnnnnntcaagatatcatattctaaactaacactgtcagatgaaaattataaataaataaacatctgcttttaa |
200 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30762566 |
gaataaaaatcaagatatcatccctaaaaaaatcaagatatcatattctaaactgacactgtcagatgaaaattataaataaataaacatctgcttttaa |
30762665 |
T |
|
| Q |
201 |
attataaataaatcaagctacagctcatactgcacctatgct |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
30762666 |
cttataaataaatcaagctacagctcatactgcacctatgct |
30762707 |
T |
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