View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15894_low_19 (Length: 257)
Name: NF15894_low_19
Description: NF15894
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15894_low_19 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 42848937 - 42849176
Alignment:
| Q |
1 |
ctcagattctagtgttccagaaatcaatgcagctcctgggaaagcatcggatcttgtttttgcaggtaaacagcatagcgatagaaagcgtcaggttcct |
100 |
Q |
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| T |
42848937 |
ctcagattctagtgttccagaaatcaatgcagctcctgggaaagcatcggatcttgtttttgcaggtaaacagcatagcgatagaaagcgtcaggttcct |
42849036 |
T |
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| Q |
101 |
ctccggaaagatagtttgaaggctaaagcaactgcttcttcaagagaatgttatttggatggaaatggtgagttcgatggcggtcagttagtaccgttta |
200 |
Q |
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| T |
42849037 |
ctccggaaagatagtttgaaggctaaagcaactgcttcttcaagagaatgttatttggatggaaatggtgagttcgatggcggtcagttagtaccgttta |
42849136 |
T |
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| Q |
201 |
agttcacagacgaagaagaactggaaagtgagttggatat |
240 |
Q |
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| T |
42849137 |
agttcacagacgaagaagaactggaaagtgagttggatat |
42849176 |
T |
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