View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15895_high_12 (Length: 477)
Name: NF15895_high_12
Description: NF15895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15895_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 15 - 391
Target Start/End: Original strand, 978853 - 979233
Alignment:
| Q |
15 |
gagaagaatatagagaaagatgaaatctagaagaaaccaag---gtttatgtagggtaacagacaaaagcacatagaaaaagaaaaggtgaatacgctct |
111 |
Q |
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| T |
978853 |
gagaagaatatagagaaaaatgaaatctagaagaaaccaagaaggtttctgtagggtaacagacaaaagcacagagaaaaagaaaaggtgaatacattat |
978952 |
T |
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| Q |
112 |
gataaagaaatcaataattcttgtagagtacaactgaaagaaagaaacacatataacaacccaggagataaaagattctagcaccagggggacccaaaca |
211 |
Q |
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| T |
978953 |
gataaagaaatcaataattcttgtagagtacaactgaaagaaagagacacatataagaacccaggagataaaagattctagcaccaggtggacccaaaca |
979052 |
T |
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| Q |
212 |
aaagcaaaggaaaaacctcagaaatcaagaagaggggattaatcttgggtcaaggtgaagaaaaggcaaaaaggaaagccaaagaataaactcaaaggaa |
311 |
Q |
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| T |
979053 |
gaagcaaaggaaaaacctcaaaaatcaagaagagaagattaatcttgggtcaaggtgaagaaaaggcaaaaaggaaagccaaagaataaactcaaaggaa |
979152 |
T |
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| Q |
312 |
cataattcggttggaaattgagatgtaaacagggga-aaaactctgagtattagaacccaagtattaatataaagtgattg |
391 |
Q |
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| T |
979153 |
cctgattcgattggaaattgagatgtaaacaggggataaaactctgagtattagaacccaggtattaatataaagtgattg |
979233 |
T |
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