View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15895_high_35 (Length: 312)
Name: NF15895_high_35
Description: NF15895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15895_high_35 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 13 - 297
Target Start/End: Original strand, 47940381 - 47940662
Alignment:
| Q |
13 |
tgaatatcaaagattgtatgtctcatatttagtttcctcctacaagtattaagtagaacttccaaaacaatatattaggccaagtagacaatatgttatt |
112 |
Q |
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| T |
47940381 |
tgaatatcaaagattgtatgtctcatatttagtttcctcctacaagtattaagtagaacttccaagacaatatattaggccaagtagacaatatgttatt |
47940480 |
T |
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| Q |
113 |
ctctattacaaactaagaaaggaaaataaaagttgaaaacatgaagcggtctatatatttcctgaccacacaagcaagcttgctgggctaatccggagac |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |
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| T |
47940481 |
ctctattacaaactaagaaaggaaaataaaagttgaaaacatgaagcggtctatatatttcctgaccacacaagcaagcttgctgggc---tccagagac |
47940577 |
T |
|
| Q |
213 |
aatacaatgctcttaagagtttaaagagacatgagggaagaaaagatctgttgactatggttcatattcgctaataagtgagtag |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47940578 |
aatacaatgctcttaagagtttaaagagacatgagggaagaaaagatctgttgactatggttcatattcgctaataagtgagtag |
47940662 |
T |
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