View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15895_low_18 (Length: 409)

Name: NF15895_low_18
Description: NF15895
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15895_low_18
NF15895_low_18
[»] chr3 (24 HSPs)
chr3 (12-191)||(20368947-20369125)
chr3 (27-191)||(52695290-52695451)
chr3 (19-143)||(27163781-27163902)
chr3 (65-160)||(51240697-51240793)
chr3 (27-191)||(46979049-46979208)
chr3 (68-155)||(7628922-7629009)
chr3 (29-143)||(52203680-52203789)
chr3 (63-143)||(20178772-20178852)
chr3 (29-127)||(45472794-45472889)
chr3 (63-157)||(2119148-2119242)
chr3 (67-141)||(35296658-35296732)
chr3 (84-189)||(32835477-32835580)
chr3 (64-132)||(39614787-39614855)
chr3 (65-191)||(29324352-29324475)
chr3 (111-191)||(35053598-35053677)
chr3 (64-127)||(36505017-36505080)
chr3 (115-191)||(40615118-40615193)
chr3 (128-191)||(53530484-53530545)
chr3 (64-191)||(24121317-24121443)
chr3 (29-158)||(21853989-21854113)
chr3 (68-106)||(12736793-12736831)
chr3 (72-137)||(20619603-20619668)
chr3 (64-158)||(21858480-21858576)
chr3 (27-106)||(43472038-43472114)
[»] chr2 (21 HSPs)
chr2 (27-191)||(7018095-7018253)
chr2 (23-191)||(35306359-35306523)
chr2 (72-191)||(17328986-17329104)
chr2 (72-191)||(21813068-21813186)
chr2 (80-191)||(41324163-41324273)
chr2 (68-185)||(42794507-42794623)
chr2 (65-160)||(38595798-38595894)
chr2 (12-127)||(40364006-40364118)
chr2 (65-168)||(44364715-44364814)
chr2 (95-191)||(30485860-30485956)
chr2 (64-143)||(11561998-11562077)
chr2 (64-191)||(37272638-37272764)
chr2 (65-191)||(30382538-30382663)
chr2 (67-156)||(5591012-5591101)
chr2 (29-127)||(40498818-40498912)
chr2 (77-136)||(35429175-35429234)
chr2 (94-143)||(40083262-40083311)
chr2 (94-191)||(45389020-45389116)
chr2 (43-157)||(26352897-26353006)
chr2 (29-120)||(36467483-36467569)
chr2 (29-114)||(8948326-8948407)
[»] chr1 (20 HSPs)
chr1 (64-191)||(14287291-14287417)
chr1 (29-191)||(25294333-25294490)
chr1 (29-191)||(31513324-31513481)
chr1 (64-191)||(38682645-38682770)
chr1 (68-191)||(41827942-41828063)
chr1 (29-127)||(11767475-11767570)
chr1 (27-188)||(17116523-17116683)
chr1 (73-142)||(49899477-49899546)
chr1 (64-156)||(4972800-4972892)
chr1 (27-140)||(10443751-10443861)
chr1 (72-153)||(16123081-16123161)
chr1 (20-191)||(31183719-31183886)
chr1 (68-166)||(40694142-40694240)
chr1 (63-191)||(271242-271369)
chr1 (74-153)||(4966994-4967073)
chr1 (64-191)||(22790879-22791001)
chr1 (64-161)||(35160397-35160494)
chr1 (64-191)||(13644041-13644170)
chr1 (119-191)||(40032902-40032973)
chr1 (29-65)||(51898544-51898580)
[»] chr4 (25 HSPs)
chr4 (29-191)||(40217830-40217989)
chr4 (68-191)||(19721439-19721561)
chr4 (64-166)||(45661959-45662061)
chr4 (37-191)||(7208226-7208377)
chr4 (64-154)||(22588307-22588397)
chr4 (79-161)||(28101749-28101831)
chr4 (68-191)||(2242614-2242737)
chr4 (97-168)||(10037710-10037781)
chr4 (64-189)||(47922732-47922856)
chr4 (27-187)||(2295645-2295799)
chr4 (68-191)||(15476476-15476598)
chr4 (74-191)||(53018308-53018421)
chr4 (64-139)||(25059115-25059188)
chr4 (29-127)||(6008400-6008495)
chr4 (72-157)||(4776053-4776139)
chr4 (42-153)||(22198580-22198688)
chr4 (75-182)||(44987546-44987656)
chr4 (36-115)||(53586595-53586671)
chr4 (72-191)||(27675714-27675835)
chr4 (72-191)||(4110103-4110216)
chr4 (72-191)||(35823233-35823356)
chr4 (119-177)||(35103292-35103349)
chr4 (41-191)||(10632299-10632443)
chr4 (74-191)||(45774273-45774388)
chr4 (101-161)||(54163160-54163221)
[»] chr7 (17 HSPs)
chr7 (72-191)||(47843503-47843622)
chr7 (64-191)||(45492440-45492566)
chr7 (66-191)||(2185471-2185596)
chr7 (91-191)||(3751251-3751349)
chr7 (64-191)||(22542665-22542790)
chr7 (27-191)||(42040153-42040311)
chr7 (72-191)||(43728194-43728312)
chr7 (29-127)||(43495582-43495677)
chr7 (13-127)||(25310691-25310802)
chr7 (29-127)||(48153226-48153321)
chr7 (27-123)||(40837273-40837367)
chr7 (68-188)||(45647961-45648080)
chr7 (27-191)||(9229326-9229482)
chr7 (73-161)||(31396922-31397011)
chr7 (72-115)||(7858214-7858257)
chr7 (64-191)||(22201378-22201505)
chr7 (64-191)||(22236316-22236443)
[»] chr5 (21 HSPs)
chr5 (64-191)||(31113723-31113850)
chr5 (27-191)||(32076225-32076387)
chr5 (68-191)||(29230810-29230932)
chr5 (29-143)||(7057323-7057435)
chr5 (29-191)||(19099745-19099903)
chr5 (64-191)||(28470050-28470178)
chr5 (29-127)||(2627789-2627884)
chr5 (64-191)||(8802538-8802664)
chr5 (66-153)||(39700747-39700834)
chr5 (64-191)||(16755799-16755926)
chr5 (29-127)||(8229486-8229581)
chr5 (29-127)||(34764495-34764591)
chr5 (109-191)||(31210624-31210705)
chr5 (29-161)||(39935914-39936042)
chr5 (80-141)||(27925795-27925856)
chr5 (43-139)||(36906953-36907046)
chr5 (29-127)||(26565152-26565247)
chr5 (124-191)||(36906865-36906930)
chr5 (28-114)||(39329734-39329816)
chr5 (95-155)||(41368919-41368979)
chr5 (64-117)||(34511046-34511099)
[»] chr8 (22 HSPs)
chr8 (72-180)||(26079541-26079648)
chr8 (64-191)||(16591152-16591280)
chr8 (29-153)||(11755410-11755531)
chr8 (64-191)||(24728275-24728409)
chr8 (75-157)||(31431065-31431147)
chr8 (30-191)||(9410137-9410292)
chr8 (64-141)||(13003563-13003640)
chr8 (29-191)||(11789072-11789227)
chr8 (67-191)||(18928291-18928414)
chr8 (19-189)||(37232050-37232217)
chr8 (29-127)||(23877194-23877289)
chr8 (72-132)||(18322071-18322130)
chr8 (72-166)||(24888505-24888596)
chr8 (83-127)||(17748755-17748799)
chr8 (79-127)||(32856214-32856262)
chr8 (64-131)||(14180429-14180495)
chr8 (112-153)||(12007029-12007070)
chr8 (119-191)||(11991016-11991087)
chr8 (72-166)||(25430316-25430407)
chr8 (75-157)||(9136455-9136538)
chr8 (105-161)||(31332375-31332433)
chr8 (111-153)||(12006989-12007031)
[»] chr6 (11 HSPs)
chr6 (86-191)||(32340024-32340128)
chr6 (66-143)||(30928564-30928641)
chr6 (29-127)||(7435016-7435112)
chr6 (64-183)||(22297087-22297211)
chr6 (65-168)||(22054330-22054429)
chr6 (68-191)||(2032083-2032208)
chr6 (29-127)||(2987959-2988054)
chr6 (20-151)||(8486248-8486374)
chr6 (68-191)||(687815-687937)
chr6 (64-153)||(6108187-6108283)
chr6 (67-127)||(10229642-10229702)
[»] scaffold0015 (1 HSPs)
scaffold0015 (43-143)||(38279-38376)
[»] scaffold0565 (1 HSPs)
scaffold0565 (86-191)||(8170-8274)
[»] scaffold0027 (1 HSPs)
scaffold0027 (101-161)||(8300-8360)
[»] scaffold0495 (1 HSPs)
scaffold0495 (68-127)||(6357-6416)
[»] scaffold0464 (1 HSPs)
scaffold0464 (64-105)||(5894-5935)


Alignment Details
Target: chr3 (Bit Score: 150; Significance: 4e-79; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 12 - 191
Target Start/End: Original strand, 20368947 - 20369125
Alignment:
Q  12 aatacttgaaatttatt-aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaag 110  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  20368947 aatacttgaaatttattcaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtat--aaaatacttgaag 20369044  T
Q  111 aaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||    
T  20369045 aaaataagcattgattactctttattattatatcattataaaagtcacaatattttaagaaataatacatgtgattaaaat 20369125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 52695290 - 52695451
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaa-taagcattgat 125  Q
    |||||||||||||| ||||| ||||| || |||| ||||   || ||| ||||||||||| || ||| |||||||||||||||||||| |||||||||||    
T  52695290 ttaaatttaagatacgatacagctaaaatacgttgacaa---aattttgatactaaaactcatatgtgtgtaaaatacttgaagaaaaataagcattgat 52695386  T
Q  126 tactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||||||||||||||| |||||||| |||||||| |||| | |||||||| |||||||||||||    
T  52695387 tactctttattattatattattataaatgtcacaattttttta-aaataatagatgtgatcaaaat 52695451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 143
Target Start/End: Original strand, 27163781 - 27163902
Alignment:
Q  19 gaaatttattaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataag 118  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||||   |||||||||||||||||||||| | |||||||||| ||||||||||||||     
T  27163781 gaaattttttaaatttaagatacgatacggctaagatacgttaaca---aaaattttatactaaaacttatatatatgtaaaattcttgaagaaaataat 27163877  T
Q  119 cattgattactctttattattatat 143  Q
    |||||| ||| ||| ||||||||||    
T  27163878 cattgagtacccttcattattatat 27163902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 51240697 - 51240793
Alignment:
Q  65 acaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttatta-ttatatcattataaaagtcacaa 160  Q
    |||||| ||||||||||||||| || ||| ||||||||||||||||| |||||||||| |||| ||||||||| |||||| ||||||||||||||||    
T  51240697 acaaaatttttatactaaaactcatatgtgtgtaaaatacttgaagataataagcatttattattctttattatttatattattataaaagtcacaa 51240793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 46979049 - 46979208
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatt 126  Q
    ||||||||| ||||||||||||  | ||| ||||||||| ||    |||||| ||||| |||| ||||||||||||||| ||||||||  | || | |||    
T  46979049 ttaaatttaggatatgatacggtcaggatacgttaacaaaaa----tttataataaaatttatctgtatgtaaaatactagaagaaaagtaacactaatt 46979144  T
Q  127 actctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||| |||||| ||| ||||||||||| ||||| |||||| |||||||| |||||||||||||    
T  46979145 actcttcattattgtattattataaaagttacaat-ttttaaaaaataatacatgtgatcaaaat 46979208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 155
Target Start/End: Original strand, 7628922 - 7629009
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagt 155  Q
    |||| |||||| | |||||||| ||||||||||| ||||||||||||| | |||||||||||||| |||||||||| |||||||||||    
T  7628922 aaaaatttataattaaacttatatgtatgtaaaacacttgaagaaaattaacattgattactcttcattattatattattataaaagt 7629009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 52203680 - 52203789
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||| |||| ||| |||||||||| |||||||||   ||||||||||||||||||||| |  |||||||| |||||||||||||||||| | |||||    
T  52203680 aaatttaggatacgattcggctaagatacgttaacaa---aaattttatactaaaacttatat--atgtaaaacacttgaagaaaataagcactaattac 52203774  T
Q  129 tctttattattatat 143  Q
     ||| ||||||||||    
T  52203775 ccttcattattatat 52203789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 63 - 143
Target Start/End: Original strand, 20178772 - 20178852
Alignment:
Q  63 caacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatat 143  Q
    ||||||||| |||||| |||||||||| | ||||||||||||||||| ||||||||||||||||||  || ||||||||||    
T  20178772 caacaaaaaatttatattaaaacttatatatatgtaaaatacttgaaaaaaataagcattgattaccattcattattatat 20178852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 45472889 - 45472794
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| |||| |||||||||  ||||||||   || ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||    
T  45472889 aaatttaggatacgatatggctaagatatgttaacaa---aatttttatattaaaacttatatgtatgtaaaatacttgaagaaaataaacattgatta 45472794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 2119242 - 2119148
Alignment:
Q  63 caacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtca 157  Q
    ||||||||| ||||||||||| ||||| || ||| ||||||||| |||||||||| ||||||| | |||| |||||| ||| |||||||||||||    
T  2119242 caacaaaaaatttatactaaagcttatatggatgcaaaatacttaaagaaaataaacattgatcaatcttcattattttattattataaaagtca 2119148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 35296732 - 35296658
Alignment:
Q  67 aaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattat 141  Q
    ||||| |||||||||||| |||  |||||||||||||||||||||||||||||||||| ||| ||| ||||||||    
T  35296732 aaaaaatttatactaaaatttacatgtatgtaaaatacttgaagaaaataagcattgactacccttcattattat 35296658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 84 - 189
Target Start/End: Complemental strand, 32835580 - 32835477
Alignment:
Q  84 acttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtg 183  Q
    |||||| |||||||||||||||| ||||||| || ||| ||||| ||||||||||||||| ||||||||||||| ||| ||  || |||| |||||||||    
T  32835580 acttatatgtatgtaaaatacttcaagaaaaaaa-catggattaatctttattattatattattataaaagtcataat-ttaaaaaaaattatatatgtg 32835483  T
Q  184 atcaaa 189  Q
    ||||||    
T  32835482 atcaaa 32835477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 39614787 - 39614855
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctt 132  Q
    ||||||||  ||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||||||    
T  39614787 aacaaaaaaattatattaaaatttatatgtatgtaaaatatttgaagaaaataagcattgattactctt 39614855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 65 - 191
Target Start/End: Complemental strand, 29324475 - 29324352
Alignment:
Q  65 acaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtt 164  Q
    ||||||| || ||| | |||||||| || |||||||||||||||| ||||||| |||| |||| || | ||||||| || ||||| ||||||||||| ||    
T  29324475 acaaaaaattcataatgaaacttatatgcatgtaaaatacttgaaaaaaataaacattaattagtcatcattattaaattattat-aaagtcacaatttt 29324377  T
Q  165 ttaagaaataatatatgtgatcaaaat 191  Q
    |||  |||||||| |||||||||||||    
T  29324376 tta--aaataatacatgtgatcaaaat 29324352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 35053598 - 35053677
Alignment:
Q  111 aaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||||| |||||||||||||| | ||||||| ||| ||||||||| ||| ||||||||||||||| |||| ||||||||    
T  35053598 aaaataaggattgattactctttgtaattatattattgtaaaagtcataat-ttttaagaaataatacatgttatcaaaat 35053677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 36505080 - 36505017
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    |||||||| ||||||||||||||||| | ||||||||||||| ||||||||||| |||| ||||    
T  36505080 aacaaaaaatttatactaaaacttatatatatgtaaaatactcgaagaaaataaacattaatta 36505017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 40615193 - 40615118
Alignment:
Q  115 taagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||||| ||||||| |||||||||||| |||||||||||| |||| | |||| ||||||||  ||||||||||||    
T  40615193 taagcattaattactcattattattatattattataaaagtcgcaatttcttaa-aaataatacttgtgatcaaaat 40615118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 128 - 191
Target Start/End: Original strand, 53530484 - 53530545
Alignment:
Q  128 ctctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||||||||||||| ||||||||||||||||| ||| |  |||||||| |||||||||||||    
T  53530484 ctctttattattatattattataaaagtcacaatttttga--aaataatacatgtgatcaaaat 53530545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 24121443 - 24121317
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||  |||||||||||| |||| || |||||||||| ||||| ||||||| ||||||||| | ||   || ||||| || |||||||||||||| |    
T  24121443 aacaaaatatttatactaaaatttatatgcatgtaaaataattgaaaaaaataaacattgattattgttctatactatataatcataaaagtcacaat-t 24121345  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    |   | ||||||||||||| ||||||||    
T  24121344 taccaaaaataatatatgttatcaaaat 24121317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 158
Target Start/End: Complemental strand, 21854113 - 21853989
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||| ||||||||| ||||||||| || |||||| | |   |||||| ||||| |||| || |||||||||| ||||| ||||  |||||| |||||    
T  21854113 aaatttaggatatgatatggctaagatacgataacaaaata---tttatagtaaaatttatatgcatgtaaaatatttgaaaaaaa--agcattaattac 21854019  T
Q  129 tctttattattatatcattataaaagtcac 158  Q
    |||| | || ||||| || |||||||||||    
T  21854018 tcttcaatactatataatcataaaagtcac 21853989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 106
Target Start/End: Complemental strand, 12736831 - 12736793
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatactt 106  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  12736831 aaaattttatactaaaacttatatgtttgtaaaatactt 12736793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 20619668 - 20619603
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttatta 137  Q
    |||| |||| ||||||||||| |  ||||||||||||||||||  ||| |||||||||||| ||||    
T  20619668 ttttttactgaaacttatgtgcaaataaaatacttgaagaaaagcagcgttgattactcttcatta 20619603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 21858576 - 21858480
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttga--agaaaataagcattgattactctttattattatatcattataaaagtcac 158  Q
    |||||||  |||||||||||| |||| || ||| |||||| ||||  | |||||||||||| ||||||||| | || ||||| || |||||||||||    
T  21858576 aacaaaatatttatactaaaatttatatgcatgcaaaatatttgataaaaaaataagcattaattactcttcaatactatataatcataaaagtcac 21858480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 43472114 - 43472038
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatactt 106  Q
    ||||| ||| |||| |||||||||||||| ||||||||| | |   |||||||||||| |||| || |||||||||||||    
T  43472114 ttaaaattaggatacgatacggctaagatacgttaacaaaata---tttatactaaaatttatatgcatgtaaaatactt 43472038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 27 - 191
Target Start/End: Complemental strand, 7018253 - 7018095
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatt 126  Q
    ||||||||| |||| |||||||||||||| |||||||||   || |||||||||||||||||  ||||||||||||||||||||||||||| ||||||||    
T  7018253 ttaaatttaggatacgatacggctaagatacgttaacaa---aatttttatactaaaacttacatgtatgtaaaatacttgaagaaaataaacattgatt 7018157  T
Q  127 actctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||| |||||||||| |||||||||||  |||| |||||| |||||||| |||||||||||||    
T  7018156 actcttcattattatattattataaaagt--caat-ttttaaaaaataatacatgtgatcaaaat 7018095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 23 - 191
Target Start/End: Complemental strand, 35306523 - 35306359
Alignment:
Q  23 tttattaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcatt 122  Q
    ||||||||||||| |||||||||||| || ||| ||||||||| ||||   | ||||||||| |||| || |||||||||||||||||||||||| ||||    
T  35306523 tttattaaatttaggatatgatacggttaggatacgttaacaaaaaaa---taatactaaaatttatatgcatgtaaaatacttgaagaaaataaacatt 35306427  T
Q  123 gattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    ||||||| || |||||||||| ||||||||||| ||||| ||||||  |||||||||||| ||||||||    
T  35306426 gattacttttcattattatattattataaaagtgacaat-ttttaaataataatatatgtcatcaaaat 35306359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 17329104 - 17328986
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaa 171  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||| ||||||||||| | ||||||||||||||||  |||||| ||    
T  17329104 ttttatactaaaacttatttgtatgtgaaatacttgaagaaaataaacatcgattactttttattattatcttattataaaagtcacaa-attttaaaaa 17329006  T
Q  172 ataatatatgtgatcaaaat 191  Q
    |||||| ||||||| |||||    
T  17329005 ataatacatgtgatgaaaat 17328986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 21813186 - 21813068
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaa 171  Q
    |||||||||||||||||| |  |||||||||| | ||||||||| || ||||||||||||| |||||||||| ||||||||||||||||| |||| | ||    
T  21813186 ttttatactaaaacttatattcatgtaaaataatcgaagaaaatcagtattgattactcttcattattatattattataaaagtcacaattttttta-aa 21813088  T
Q  172 ataatatatgtgatcaaaat 191  Q
    |||||| |||||||||||||    
T  21813087 ataatacatgtgatcaaaat 21813068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 80 - 191
Target Start/End: Complemental strand, 41324273 - 41324163
Alignment:
Q  80 taaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatata 179  Q
    |||||||||| ||||||||||||||||||| ||||||| |||||||||| ||| |||||||||| |||||||||||  |||| |||||| |||||||| |    
T  41324273 taaaacttatatgtatgtaaaatacttgaacaaaataaacattgattacccttcattattatattattataaaagtatcaattttttaa-aaataataca 41324175  T
Q  180 tgtgatcaaaat 191  Q
    ||||||||||||    
T  41324174 tgtgatcaaaat 41324163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 42794507 - 42794623
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttta 167  Q
    |||| |||||| |||||||| | ||||||||||||||||||||||||| | |||||||||||||| |||||| ||| ||||||||||| | ||| |||||    
T  42794507 aaaaatttataataaaacttgtatgtatgtaaaatacttgaagaaaattaacattgattactcttcattattgtattattataaaagttataat-tttta 42794605  T
Q  168 agaaataatatatgtgat 185  Q
    | |||||||| |||||||    
T  42794606 aaaaataatacatgtgat 42794623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 65 - 160
Target Start/End: Original strand, 38595798 - 38595894
Alignment:
Q  65 acaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttatta-ttatatcattataaaagtcacaa 160  Q
    |||||| ||||||||||||||| || ||| ||||||||||||||||| |||||||||| |||| ||||||||| |||||| ||||||||||||||||    
T  38595798 acaaaatttttatactaaaactcatatgtgtgtaaaatacttgaagataataagcatttattattctttattatttatattattataaaagtcacaa 38595894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 12 - 127
Target Start/End: Complemental strand, 40364118 - 40364006
Alignment:
Q  12 aatacttgaaatttattaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaaga 111  Q
    ||||| |||| ||| | ||||||| |||| |||||| ||||||| ||||||||| |||   ||||||||||||||||| |||| ||||||||||||||||    
T  40364118 aatacgtgaattttttaaaatttaggatacgatacgactaagatacgttaacaaaaaa---tttatactaaaacttatatgtacgtaaaatacttgaaga 40364022  T
Q  112 aaataagcattgatta 127  Q
    |||||| |||||||||    
T  40364021 aaataaacattgatta 40364006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 44364814 - 44364715
Alignment:
Q  65 acaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtt 164  Q
    |||||| ||||||||||||||| |||||   |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||  |||||||||| ||    
T  44364814 acaaaatttttatactaaaactcatgtga--gtaaaatacttgaagaaaataaacattggttactctttattattatattattat--aagtcacaatttt 44364719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 95 - 191
Target Start/End: Complemental strand, 30485956 - 30485860
Alignment:
Q  95 tgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||| ||||||||||||| ||| ||| || || |||||  ||||||||||||    
T  30485956 tgtaaaatacttaaagtacataagcattgattactctttattattatattattataaaagtcaaaatttttaaaaaattaatacgtgtgatcaaaat 30485860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 11561998 - 11562077
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatat 143  Q
    ||||||| || |||||||| |||||| ||||| |||||||||||||||||||||||||||||||| ||| ||||||||||    
T  11561998 aacaaaatttgtatactaacacttatatgtatataaaatacttgaagaaaataagcattgattacccttcattattatat 11562077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 37272638 - 37272764
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||| ||||||  |||| |||| ||||||||||||||||||| ||||| | |||||||||||||| |||||||||  ||||||||| | ||||| |    
T  37272638 aacaaaaaatttatataaaaatttatatgtatgtaaaatacttgaaaaaaatgaacattgattactcttcattattataatattataaaactaacaattt 37272737  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    | ||| |||||||| || ||||||||||    
T  37272738 tgtaa-aaataatacatatgatcaaaat 37272764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 65 - 191
Target Start/End: Original strand, 30382538 - 30382663
Alignment:
Q  65 acaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtt 164  Q
    |||||| | ||||| ||||||| || ||| |||||| ||| ||||||||||||| ||| |||||||||||||||||||| |||||||||||  |||| ||    
T  30382538 acaaaattattatattaaaactcatatgtgtgtaaattacatgaagaaaataagtattaattactctttattattatattattataaaagttgcaat-tt 30382636  T
Q  165 ttaagaaataatatatgtgatcaaaat 191  Q
    | || |||||||| | |||||||||||    
T  30382637 taaaaaaataatacaggtgatcaaaat 30382663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 156
Target Start/End: Complemental strand, 5591101 - 5591012
Alignment:
Q  67 aaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtc 156  Q
    ||||| ||||||||||||||||| | |||| ||| |||||||||||||||| || |||||||| || ||||||||||||| |||||||||    
T  5591101 aaaaaatttatactaaaacttatatttatgcaaattacttgaagaaaataaacaatgattacttttaattattatatcatcataaaagtc 5591012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 40498912 - 40498818
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| ||||| |||||||| ||||||    ||||| ||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  40498912 aaatttaggatacgatacagctaagatacgttaa----aaaaaatttatactaaaacttatatgtatgtaaaatacttgaagaaaataaatattgatta 40498818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 77 - 136
Target Start/End: Complemental strand, 35429234 - 35429175
Alignment:
Q  77 tactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttatt 136  Q
    |||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||    
T  35429234 tactaaaactaatatgcatgtacaatacttgaagaaaataagcattgattactctttatt 35429175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 40083311 - 40083262
Alignment:
Q  94 atgtaaaatacttgaagaaaataagcattgattactctttattattatat 143  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  40083311 atgtaaaatacttgaagaaaataaacattgattattctttattattatat 40083262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 191
Target Start/End: Complemental strand, 45389116 - 45389020
Alignment:
Q  94 atgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||||||||||||| ||||||||||| ||||||| || | || ||||| || |||||||||||||| ||  || |||||||| |||||||||||||    
T  45389116 atgtaaaatacttgaaaaaaataagcatcgattacttttcaatactatataatcataaaagtcacaat-ttacaaaaaataatacatgtgatcaaaat 45389020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 43 - 157
Target Start/End: Complemental strand, 26353006 - 26352897
Alignment:
Q  43 atacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattata 142  Q
    ||||||||||||| ||||||||| | |   |||||||||||| |||| |  |||||||||||||||| |||||||||||||||||||||| | || ||||    
T  26353006 atacggctaagatacgttaacaaaata---tttatactaaaatttatatc-atgtaaaatacttgaa-aaaataagcattgattactcttcaatactata 26352912  T
Q  143 tcattataaaagtca 157  Q
      || ||||||||||    
T  26352911 aaatcataaaagtca 26352897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Complemental strand, 36467569 - 36467483
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagca 120  Q
    ||||||| |||| ||||||||||| || |||||||||   || |||||||||||||  ||| | ||||||||| ||||||||||||||||||    
T  36467569 aaatttaggatacgatacggctaaaatacgttaacaa---aatttttatactaaaa--tatatatatgtaaaacacttgaagaaaataagca 36467483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 29 - 114
Target Start/End: Complemental strand, 8948407 - 8948326
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaa 114  Q
    ||||||| ||||||||||  ||||||| ||||||||| |||   ||||||||||||||||| |  |||| ||||||||||||||||    
T  8948407 aaatttaggatatgatacaactaagatacgttaacaaaaaa---tttatactaaaacttatatagatgt-aaatacttgaagaaaa 8948326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 9e-40; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 14287417 - 14287291
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||||||||| |    
T  14287417 aacaaaaattttataccaaaacttatttgtatgtaaaatacttgaagaaaatatacattgattactctttattattatctaattataaaagtcacaattt 14287318  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    ||||| |||||||| ||||||| |||||    
T  14287317 tttaa-aaataatacatgtgatgaaaat 14287291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 25294333 - 25294490
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||| |||| ||||||| || ||| ||||||||| ||    |||||| |||||||||| |||||||||||||||| |||||||| | ||||||||||    
T  25294333 aaatttaggatacgatacggttatgatacgttaacaaaaa----tttataataaaacttatatgtatgtaaaatacttcaagaaaattaacattgattac 25294428  T
Q  129 tctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||| |||||| ||| ||||||||||| ||||| |||||| |||||||| |||||||||||||    
T  25294429 tcttcattattgtattattataaaagttacaat-ttttaaaaaataatacatgtgatcaaaat 25294490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 31513324 - 31513481
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||||||||  |||||| || ||| ||||||||| ||    |||||| |||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  31513324 aaatttaagatacaatacggttatgatacgttaacaaaaa----tttataataaaacttatatgtatgtaaaatacttgaagaaaattaacattgattac 31513419  T
Q  129 tctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||| |||||| ||| ||||||||||| ||||| |||||| |||||||| ||||  |||||||    
T  31513420 tcttcattattgtattattataaaagttacaat-ttttaaaaaataatacatgttgtcaaaat 31513481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 38682645 - 38682770
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||||| |||| |||||||||  | ||||||||||||||||||||||||| |||||||||||||| || ||||| | |||||||| |||||||  |    
T  38682645 aacaaaaattctataataaaacttaaatatatgtaaaatacttgaagaaaataaacattgattactcttcataattatcttattataaatgtcacaa--t 38682742  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    ||||| |||||||| || ||||||||||    
T  38682743 tttaaaaaataataaatatgatcaaaat 38682770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 68 - 191
Target Start/End: Complemental strand, 41828063 - 41827942
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttta 167  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||| |||||| ||||||||| |||||| ||| || |||||||| ||||| ||| |    
T  41828063 aaaaatttataataaaacttatatgtatgtaaaatacttgaagaaaattagcattaattactcttcattattgtat-ataataaaagttacaat-tttaa 41827966  T
Q  168 agaaataatatatgtgatcaaaat 191  Q
    | |||||||| |||||||||||||    
T  41827965 aaaaataatacatgtgatcaaaat 41827942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 11767475 - 11767570
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| ||||||| |||||| |||||||||   || |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||    
T  11767475 aaatttaggatacgatacggttaagatacgttaacaa---aatttttatactaaaacatatatgtatgtaaaatacttgaagaaaataaacattgatta 11767570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 188
Target Start/End: Complemental strand, 17116683 - 17116523
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtat----gtaaaatacttgaagaaaataagcatt 122  Q
    |||||||||||||| ||||||| || ||| ||||||||| ||    |||||| | |||||||| |||||    ||||||||||| |||||||| |  |||    
T  17116683 ttaaatttaagatacgatacggttaggatacgttaacaaaaa----tttataattaaacttatatgtatatatgtaaaatacttaaagaaaattaatatt 17116588  T
Q  123 gattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaa 188  Q
     ||||||||| |||||| ||| ||||||||||| ||||| |||||| |||||||||||||||||||    
T  17116587 aattactcttcattattgtattattataaaagttacaattttttaa-aaataatatatgtgatcaa 17116523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 49899546 - 49899477
Alignment:
Q  73 tttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattata 142  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||||||| |||||||||    
T  49899546 tttatactaaaacttatatgtaagtaaaatacttaaagaaaataaacattgattactcttcattattata 49899477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 64 - 156
Target Start/End: Original strand, 4972800 - 4972892
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtc 156  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| | ||||||| |||| | |||||||  ||||| ||| ||||||||||||    
T  4972800 aacaaaatttttatactaaaacttatatgtatgtaaaatacttggaaaaaataaacatttaatactcttcgttattttattattataaaagtc 4972892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 27 - 140
Target Start/End: Complemental strand, 10443861 - 10443751
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatt 126  Q
    ||||||||| |||| |||||||||| |||  |||||| |   || ||| |||||||||||||| ||||| |||||||||||||||||||||||||||| |    
T  10443861 ttaaatttaggatacgatacggctatgataagttaacga---aattttcatactaaaacttatatgtatataaaatacttgaagaaaataagcattgact 10443765  T
Q  127 actctttattatta 140  Q
    || ||| |||||||    
T  10443764 acccttcattatta 10443751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 16123161 - 16123081
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaa 153  Q
    ||||||||||| |||||| || ||||||||||||||||| |||||| |||||||||||||| |||||||||  |||||||||    
T  16123161 ttttatactaacacttatatgcatgtaaaatacttgaag-aaataaacattgattactcttgattattatactattataaaa 16123081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 20 - 191
Target Start/End: Complemental strand, 31183886 - 31183719
Alignment:
Q  20 aaatttattaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagc 119  Q
    |||||| | ||||||| |||| |||||||||||||| ||||||||| | |   ||||| |||||| |||| || ||||||||||||| || |||| || |    
T  31183886 aaatttttaaaatttaggatacgatacggctaagatacgttaacaaaata---tttattctaaaatttatatgcatgtaaaatacttaaaaaaaaaaaac 31183790  T
Q  120 attgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    ||||||||||||| | || ||||| || ||||||||||| || ||  || |||||||| |||| ||||||||    
T  31183789 attgattactcttcaatactatataatcataaaagtcaccat-ttacaaaaaataatacatgtaatcaaaat 31183719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 166
Target Start/End: Complemental strand, 40694240 - 40694142
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttt 166  Q
    |||| |||||| | |||||||| | ||||||||||||||||||||||| |  ||||||||||||| |||||| ||| ||||||||| | ||||| ||||    
T  40694240 aaaaatttataatgaaacttatatttatgtaaaatacttgaagaaaattaatattgattactcttcattattgtattattataaaatttacaatttttt 40694142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 271369 - 271242
Alignment:
Q  63 caacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatg 162  Q
    |||||||  ||||||| |||||||||| |  ||||||| |||||||||||||||| |||  ||||||||| |||||||||| | | ||||||||| |||     
T  271369 caacaaattttttatattaaaacttatattcatgtaaattacttgaagaaaataaacatgaattactcttcattattatattaatctaaaagtcataat- 271271  T
Q  163 ttttaagaaataatatatgtgatcaaaat 191  Q
    ||  || |||||||| |||| ||||||||    
T  271270 ttaaaaaaaataatacatgttatcaaaat 271242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 74 - 153
Target Start/End: Complemental strand, 4967073 - 4966994
Alignment:
Q  74 ttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaa 153  Q
    |||||||||||||||| ||||||||||| ||||||| ||||||| |||| | |||||||  ||||| ||| |||||||||    
T  4967073 ttatactaaaacttatatgtatgtaaaacacttgaaaaaaataaacatttaatactcttcgttattttattattataaaa 4966994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 22790879 - 22791001
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||  |||||||||||| |||| || |||||||||||||    |||| || |||||||||||||| | || ||||| || |||||||||||||| |    
T  22790879 aacaaaatatttatactaaaatttatatgcatgtaaaatactt----aaaaaaaacattgattactcttcaatactatataatcataaaagtcacaat-t 22790973  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    |  || |||||||| |||||||||||||    
T  22790974 tacaaaaaataatacatgtgatcaaaat 22791001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 161
Target Start/End: Complemental strand, 35160494 - 35160397
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaat 161  Q
    |||||||| |||||| ||||||||||    ||||||||||||||||  ||||| |||||||||||||||  ||| ||||| ||||||||  |||||||    
T  35160494 aacaaaaaatttataataaaacttataaacatgtaaaatacttgaaagaaatatgcattgattactcttagttaatatataattataaagatcacaat 35160397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 13644170 - 13644041
Alignment:
Q  64 aacaaaaattttatactaaaacttatg------tgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtca 157  Q
    |||||||| |||||||||||||||||       || ||||||||||||||||||||||||  ||| |||||||   ||| |||||| ||||||||||||     
T  13644170 aacaaaaaatttatactaaaacttatactcatatgcatgtaaaatacttgaagaaaataaatatttattactc---attgttatattattataaaagtcg 13644074  T
Q  158 caatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||| || ||| |||||||| ||||||| |||||    
T  13644073 caat-ttataaaaaataatacatgtgattaaaat 13644041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 40032973 - 40032902
Alignment:
Q  119 cattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||| ||||||||| ||||||| || ||||||||||| ||||| |||||  |||||||| ||||| |||||||    
T  40032973 catttattactcttcattattaaattattataaaagtaacaat-ttttacaaaataatacatgtgctcaaaat 40032902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 51898544 - 51898580
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaa 65  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  51898544 aaatttaggatatgatacggttaagattcgttaacaa 51898580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 5e-38; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 29 - 191
Target Start/End: Complemental strand, 40217989 - 40217830
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||| |||| |||||||||||||| ||||||||| | |   ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||    
T  40217989 aaatttaggatacgatacggctaagatacgttaacaaaata---tttatactaaaacttatatgtatataaaatacttgaagaaaataaacattgattac 40217893  T
Q  129 tctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||| |  ||||||| ||||||||||||||||| |||| | ||||||||||| |||| |||||    
T  40217892 tcttcaagattatattattataaaagtcacaatttttttaaaaataatatatatgattaaaat 40217830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 19721439 - 19721561
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttta 167  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||| |  ||||||||||||| |||||| ||| ||||||||||| ||||| |||||    
T  19721439 aaaaatttataataaaacttatatgtatgtaaaatacttgaagaaaattaatattgattactcttcattattgtattattataaaagttacaatttttta 19721538  T
Q  168 agaaataatatatgtgatcaaaat 191  Q
    | |||||||| |||||||||||||    
T  19721539 a-aaataatacatgtgatcaaaat 19721561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 166
Target Start/End: Complemental strand, 45662061 - 45661959
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    ||||||| |||||||||||||||||| || |||||||||| ||||||||||| | ||||||||||| || |||||||||| ||||||||||||||||| |    
T  45662061 aacaaaatttttatactaaaacttatatgcatgtaaaatatttgaagaaaatcatcattgattacttttcattattatattattataaaagtcacaattt 45661962  T
Q  164 ttt 166  Q
    |||    
T  45661961 ttt 45661959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 191
Target Start/End: Original strand, 7208226 - 7208377
Alignment:
Q  37 gatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttatt 136  Q
    |||| ||||||| || ||| | ||||||| |||||||  || ||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||    
T  7208226 gatacgatacggttaggatacattaacaaaaaaaatt--atcctaaaacttatatgtatgtaaaatatttgaagaaaataaacattgattactcttcatt 7208323  T
Q  137 attatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    || |||| ||||||||| |  |||| |||||| |||| ||| |||||||||||||    
T  7208324 atcatattattataaaactatcaattttttaa-aaatgatacatgtgatcaaaat 7208377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 64 - 154
Target Start/End: Complemental strand, 22588397 - 22588307
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaag 154  Q
    ||||||||  |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| ||| |||||| ||||||||||    
T  22588397 aacaaaaaaattatactaaaacttatatgtatataaaatacttgaagaaaataaacattgattactcttcattgttatattattataaaag 22588307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 28101749 - 28101831
Alignment:
Q  79 ctaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaat 161  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||||    
T  28101749 ctaaaacttatatgcatgcaaaatacttgaagaaaataagcattgattactctttattattatattagtataaatgtcacaat 28101831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 2242614 - 2242737
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttta 167  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||| | ||  |||||||||| |||||| ||| ||||||||||| ||||| |   |    
T  2242614 aaaaatttataataaaacttatatgtatgtaaaatacttgaagaaaattaacaccgattactcttcattattgtattattataaaagttacaatttaaaa 2242713  T
Q  168 agaaataatatatgtgatcaaaat 191  Q
    | |||||||| |||||||||||||    
T  2242714 aaaaataatacatgtgatcaaaat 2242737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 10037710 - 10037781
Alignment:
Q  97 taaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaa 168  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||| ||||||    
T  10037710 taaaatacttgaagaaaattagcattgattactctttattattatattattataaaagtcataattttttaa 10037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 64 - 189
Target Start/End: Original strand, 47922732 - 47922856
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||| |||||| |||||| ||  ||||| ||||||| |||||||||||||||||||||||||||| |||||| ||| |||||||||||  ||   |    
T  47922732 aacaaaaaatttataataaaacatacatgtatctaaaatatttgaagaaaataagcattgattactcttcattattgtattattataaaagtttcagatt 47922831  T
Q  164 tttaagaaataatatatgtgatcaaa 189  Q
    ||||| |||||||| |||||||||||    
T  47922832 tttaa-aaataatacatgtgatcaaa 47922856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 187
Target Start/End: Complemental strand, 2295799 - 2295645
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatt 126  Q
    ||||||||| |||| ||||||| || ||| ||||||||| |||    ||||| |||| ||||| ||||| ||||||||||||||||||| | |||| |||    
T  2295799 ttaaatttaggatacgatacggttaggatacgttaacaaaaaa----ttataataaa-cttatatgtatataaaatacttgaagaaaatcaacattaatt 2295705  T
Q  127 actctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatca 187  Q
    |||||| |||||| ||| ||||||||||| ||||| |||||| |||| ||| |||||||||    
T  2295704 actcttcattattgtattattataaaagttacaattttttaa-aaattatacatgtgatca 2295645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 15476476 - 15476598
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttta 167  Q
    |||| |||||| ||||| |||| ||||||||||||||||||||||||  | ||  |||||||||| |||||| ||| ||||||||||| ||||| |||||    
T  15476476 aaaaatttataataaaatttatatgtatgtaaaatacttgaagaaaagtaacaccgattactcttcattattgtattattataaaagttacaat-tttta 15476574  T
Q  168 agaaataatatatgtgatcaaaat 191  Q
    |  ||||||| |||||||||||||    
T  15476575 aacaataatacatgtgatcaaaat 15476598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 74 - 191
Target Start/End: Original strand, 53018308 - 53018421
Alignment:
Q  74 ttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaat 173  Q
    ||||| |||||||||| ||||||||||||||||||||||||| | ||||| |||||||| |||||| |   ||||||||||| ||||| ||||||| |||    
T  53018308 ttataataaaacttatatgtatgtaaaatacttgaagaaaattaacattgtttactcttcattattgt---attataaaagttacaattttttaag-aat 53018403  T
Q  174 aatatatgtgatcaaaat 191  Q
    |||| ||||| |||||||    
T  53018404 aatacatgtggtcaaaat 53018421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 64 - 139
Target Start/End: Original strand, 25059115 - 25059188
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattatt 139  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  25059115 aacaaaaattttatactaaa--ttatatgtatgtaaaatacttgaagaaaataaacattgagtactcttcattatt 25059188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 6008495 - 6008400
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| |||||||||||||| | ||||  ||||||| |||||| |||||||||| ||||||||||||||||||||||||||| |||| ||||    
T  6008495 aaatttaggatacgatacggctaagatac-ttaa--acaaaaaatttatattaaaacttatatgtatgtaaaatacttgaagaaaataaacattaatta 6008400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 157
Target Start/End: Complemental strand, 4776139 - 4776053
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta-ctctttattattatatcattataaaagtca 157  Q
    ||||||| |||||||||| ||||||||||||||||||  ||||||||||||||||| || || ||| |||||| |||||||||||||    
T  4776139 ttttatattaaaacttatatgtatgtaaaatacttgataaaaataagcattgattatcttttcattgttatattattataaaagtca 4776053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 42 - 153
Target Start/End: Original strand, 22198580 - 22198688
Alignment:
Q  42 gatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattat 141  Q
    |||||||||||||| ||||||||| | |   ||||||||||||||||| |  |||||||||||||||| |||||||||||| ||||||||| | || |||    
T  22198580 gatacggctaagatgcgttaacaaaata---tttatactaaaacttatatacatgtaaaatacttgaaaaaaataagcatttattactcttcaatactat 22198676  T
Q  142 atcattataaaa 153  Q
    || || ||||||    
T  22198677 ataatcataaaa 22198688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 182
Target Start/End: Complemental strand, 44987656 - 44987546
Alignment:
Q  75 tatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactct--ttat--tattatatcattataaaagtcacaatgttttaaga 170  Q
    ||||||||||||||| |  |||||||||||||||||||||||||||  |||||||||  ||||  |||||||| |||||||||||| |||| |||||| |    
T  44987656 tatactaaaacttatattcatgtaaaatacttgaagaaaataagcaacgattactcttattattatattatattattataaaagtcgcaattttttaa-a 44987558  T
Q  171 aataatatatgt 182  Q
    ||||||| ||||    
T  44987557 aataatacatgt 44987546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 53586671 - 53586595
Alignment:
Q  36 agatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaat 115  Q
    ||||| |||||||||||||| ||||||||| |||   ||||||||||||||||| | |||||||||||||||||||||||    
T  53586671 agatacgatacggctaagatacgttaacaaaaaa---tttatactaaaacttatatttatgtaaaatacttgaagaaaat 53586595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 27675835 - 27675714
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattatta---tatcattataaaagtcacaatgttttaa 168  Q
    ||||||| |||||||||| | | ||||||||||||||||||||||| | |||| ||||||| || ||||   ||| ||||||||||||| ||| ||||||    
T  27675835 ttttataataaaacttatatatgtgtaaaatacttgaagaaaataaactttgagtactcttcataattatattattattataaaagtcataattttttaa 27675736  T
Q  169 gaaataatatatgtgatcaaaat 191  Q
     |||||||| | |||||||||||    
T  27675735 -aaataatacacgtgatcaaaat 27675714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 4110103 - 4110216
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaa 171  Q
    |||||||||||||||||| |  ||||||||||||||||||||| |  |||| ||||||||||||  | |||| |||||||||||| |||   ||||| ||    
T  4110103 ttttatactaaaacttatatacatgtaaaatacttgaagaaaaca--cattcattactctttatattaatattattataaaagtcgcaa---tttaa-aa 4110196  T
Q  172 ataatatatgtgatcaaaat 191  Q
    | ||||||||||||||||||    
T  4110197 aaaatatatgtgatcaaaat 4110216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 35823233 - 35823356
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactct---tta--ttattatatcattataaaagtcacaatgtttt 166  Q
    |||||||||||||||||| || || |||||||||| || ||||| | ||||  |||||||   |||  ||||||| | ||||||||||||||||| ||||    
T  35823233 ttttatactaaaacttatttgcatttaaaatactttaaaaaaatcaacattagttactctacgttacgttattatgttattataaaagtcacaat-tttt 35823331  T
Q  167 aagaaataatatatgtgatcaaaat 191  Q
    || |||||||| |||||||||||||    
T  35823332 aaaaaataatacatgtgatcaaaat 35823356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 177
Target Start/End: Original strand, 35103292 - 35103349
Alignment:
Q  119 cattgattactctttattattatatcattataaaagtcacaatgttttaagaaataata 177  Q
    ||||||||||||||||||||| ||| ||||||||||| ||||| |||||| ||||||||    
T  35103292 cattgattactctttattattgtattattataaaagttacaat-ttttaaaaaataata 35103349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 41 - 191
Target Start/End: Complemental strand, 10632443 - 10632299
Alignment:
Q  41 tgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattatta 140  Q
    |||||||||||| || ||||||||| | |   ||||||  |||| |||| || |||||||||||||||| |||| |  ||||||||||| || | |||||    
T  10632443 tgatacggctaacatacgttaacaaaata---tttatatgaaaatttatatgcatgtaaaatacttgaaaaaaaaa--cattgattactattcaatatta 10632349  T
Q  141 tatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    ||| || ||||| |||||||| ||  || |||||||| |||||||||||||    
T  10632348 tataatcataaatgtcacaat-ttacaaaaaataatacatgtgatcaaaat 10632299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 45774388 - 45774273
Alignment:
Q  74 ttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaat 173  Q
    ||||| ||| |||||| | |||||||||||||| |||||||| | ||  ||| ||| || |||||| ||| ||||||||||| ||||| ||||   |||     
T  45774388 ttataataatacttatctatatgtaaaatacttcaagaaaattaacaccgataactattcattattgtattattataaaagttacaatttttt--taaaa 45774291  T
Q  174 aatatatgtgatcaaaat 191  Q
    |||| |||||||||||||    
T  45774290 aatacatgtgatcaaaat 45774273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 161
Target Start/End: Original strand, 54163160 - 54163221
Alignment:
Q  101 atacttgaag-aaaataagcattgattactctttattattatatcattataaaagtcacaat 161  Q
    |||||||||| |||| || |||||||||||||| || ||||||| || ||||||||||||||    
T  54163160 atacttgaaggaaaaaaaacattgattactcttcatcattatataatcataaaagtcacaat 54163221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 5e-35; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 72 - 191
Target Start/End: Original strand, 47843503 - 47843622
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaa 171  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| ||| |||||||||  ||||||||||||||||| |||| | ||    
T  47843503 ttttataataaaacttatatgtatgtaaaatacttgaagaaaataaacattgattacccttcattattatactattataaaagtcacaatttttttataa 47843602  T
Q  172 ataatatatgtgatcaaaat 191  Q
    |||||| |||||||||||||    
T  47843603 ataatacatgtgatcaaaat 47843622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 45492566 - 45492440
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||||||||  |||||||||||||| |||||||| | ||||||||||||| ||| |    
T  45492566 aacaaaaaatttataccaaaacttatttgtatgtaaaatacttgaagaaaatatacattgattactcttcattattatcttattataaaagtcataattt 45492467  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    ||||| |||||||| ||||||| |||||    
T  45492466 tttaa-aaataatacatgtgatgaaaat 45492440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 66 - 191
Target Start/End: Original strand, 2185471 - 2185596
Alignment:
Q  66 caaaaattttatactaaaacttatgtgtatgtaaaa-tacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtt 164  Q
    |||||||||||||| ||||| ||| ||||||||||| |||||||||||||||| |||||||||||||| |||||||| | ||||||||||||||||| ||    
T  2185471 caaaaattttataccaaaacatatttgtatgtaaaaatacttgaagaaaataaacattgattactcttcattattatctaattataaaagtcacaat-tt 2185569  T
Q  165 ttaagaaataatatatgtgatcaaaat 191  Q
    |||| |||||||| ||||||| |||||    
T  2185570 ttaaaaaataatacatgtgatgaaaat 2185596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 191
Target Start/End: Original strand, 3751251 - 3751349
Alignment:
Q  91 tgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaa 190  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||| ||||||||||||||||  |||||||||| |||| |||| |||||||    
T  3751251 tgtatgtaaaatacttgaagaaaataatcattgattattcttcattattatattattataaaagtcacaa--ttttaagaaaaaatacatgtaatcaaaa 3751348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 22542665 - 22542790
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||| | |||| |||||||||  ||||| ||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||| |    
T  22542665 aacaaaaaatatataataaaacttaa-tgtatataaaatacttgaagaaaataaacattgattactcttcattattatattcttataaaagtcacaattt 22542763  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    ||||| |||||||| || | ||||||||    
T  22542764 tttaa-aaataatacatctaatcaaaat 22542790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 42040153 - 42040311
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatt 126  Q
    ||||||||| |||| ||||||| || ||| ||||||||| ||    |||||| |||||||||| |||||||||| |||||||||||||| | ||||||||    
T  42040153 ttaaatttaggatacgatacggttaggatacgttaacaaaaa----tttataataaaacttatatgtatgtaaa-tacttgaagaaaattaacattgatt 42040247  T
Q  127 actctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||| |||||| ||| ||||||||||| | ||| |||||  |||||||| |||||||||||||    
T  42040248 actcttcattattgtattattataaaagttataat-ttttagaaaataatacatgtgatcaaaat 42040311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 43728312 - 43728194
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaa 171  Q
    |||||||||||| ||||| ||||||| |||||||| |||||||||| || ||||||||||| |||||||||| |||||||||||| | || |||| | ||    
T  43728312 ttttatactaaatcttatatgtatgtgaaatacttaaagaaaataaacactgattactcttaattattatattattataaaagtcgcgat-ttttgaaaa 43728214  T
Q  172 ataatatatgtgatcaaaat 191  Q
    |||||| |||||||||||||    
T  43728213 ataatacatgtgatcaaaat 43728194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 43495582 - 43495677
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||||||||| |||||| |||||| ||||||||   |||||||||||||||||||||| |||||||||||||  |||||||||||| |||||||||    
T  43495582 aaatttaagatataatacggttaagatacgttaaca---aaaattttatactaaaacttatatgtatgtaaaatatctgaagaaaataaacattgatta 43495677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 127
Target Start/End: Original strand, 25310691 - 25310802
Alignment:
Q  13 atacttgaaatttattaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaa 112  Q
    ||||| ||| ||| ||||||||| |||| ||||| | |||||| |||||||||   |||| |||||||||||||||| ||||||||||||| ||||||||    
T  25310691 atactcgaatttttttaaatttaggatacgatacagttaagatacgttaacaa---aaatattatactaaaacttatatgtatgtaaaatatttgaagaa 25310787  T
Q  113 aataagcattgatta 127  Q
    ||||| |||||||||    
T  25310788 aataaacattgatta 25310802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 48153321 - 48153226
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| ||||||||||||| || ||  |||   ||||||||||||||||||||| |||| |||||||||||||||||||| ||||||  ||||||||    
T  48153321 aaatttaggatatgatacggccaaaatatgtt---aacaaaaattttatactaaaatttatatgtatgtaaaatacttgaagtaaataaatattgatta 48153226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 27 - 123
Target Start/End: Complemental strand, 40837367 - 40837273
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgt-aaaatacttgaagaaaataagcattg 123  Q
    ||||||||| |||| ||||||| |||||| | ||||||| |||   ||||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  40837367 ttaaatttaggatacgatacggttaagatacattaacaaaaaa---tttatactaaaacttatatgtatgtaaaaatacttgaagaaaataaacattg 40837273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 68 - 188
Target Start/End: Original strand, 45647961 - 45648080
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttta 167  Q
    |||| |||||| |||||||||| | ||||||||||||||||||||||| |  | |||||||| || |||||| ||| |||| |||||| | ||| |||||    
T  45647961 aaaaatttataataaaacttatctatatgtaaaatacttgaagaaaattaaaactgattactgttcattattgtattattaaaaaagttataatttttta 45648060  T
Q  168 agaaataatatatgtgatcaa 188  Q
    | |||||||| ||| ||||||    
T  45648061 a-aaataatacatgcgatcaa 45648080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 9229326 - 9229482
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatt 126  Q
    ||||| ||| |||| |||||||||||||| |||||||||   |   |||||||||||| |||| ||||||||||||||||    |||| || ||||||||    
T  9229326 ttaaaattatgatacgatacggctaagatacgttaacaaatta---tttatactaaaatttatatgtatgtaaaatactt----aaaaaaaacattgatt 9229418  T
Q  127 actctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||| |  | ||||| || ||||||||| | || ||  || |||||||| |||||||||||||    
T  9229419 actcttcaaaactatataatcataaaagtcgcgat-ttacaaaaaataatacatgtgatcaaaat 9229482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 161
Target Start/End: Original strand, 31396922 - 31397011
Alignment:
Q  73 tttatactaaaacttatgtgtatgtaaaatacttgaagaaaa-taagcattgattactctttattattatatcattataaaagtcacaat 161  Q
    |||||||| ||| |||| ||||||||||||||||||| |||| ||||||||| || ||||| | |  ||||| || ||||||||||||||    
T  31396922 tttatactgaaatttatatgtatgtaaaatacttgaaaaaaactaagcattggtttctcttcaatgctatataatcataaaagtcacaat 31397011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 7858257 - 7858214
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaat 115  Q
    ||||||| |||||||||| || ||||||||||||||||||||||    
T  7858257 ttttatattaaaacttatatgcatgtaaaatacttgaagaaaat 7858214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 191
Target Start/End: Complemental strand, 22201505 - 22201378
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgta--tgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaat 161  Q
    |||||||  ||||||||||||||||| | ||  | |||||||  | |||||||||||||||| |||| ||| ||| |||| | |||||| |||| |||||    
T  22201505 aacaaaatgtttatactaaaacttatatatacatctaaaatatataaagaaaataagcattggttacccttcattgttatgttattatacaagttacaat 22201406  T
Q  162 gttttaagaaataatatatgtgatcaaaat 191  Q
     ||||   |||||||| |||||||||||||    
T  22201405 ttttt--taaataatacatgtgatcaaaat 22201378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 22236316 - 22236443
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgta--tgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaat 161  Q
    |||||||  ||||||||||||||||| | ||  | |||||||  | |||||||||||||||| |||| ||| ||| |||| | |||||| |||| |||||    
T  22236316 aacaaaatgtttatactaaaacttatatatacatctaaaatatataaagaaaataagcattggttacccttcattgttatgttattatacaagttacaat 22236415  T
Q  162 gttttaagaaataatatatgtgatcaaaat 191  Q
     ||||   |||||||| |||||||||||||    
T  22236416 ttttt--taaataatacatgtgatcaaaat 22236443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 76; Significance: 5e-35; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 31113723 - 31113850
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| |||||||||| |||||| | | ||||||||||||||||| |    
T  31113723 aacaaaaattttatactaaaacttatttgtatggaaaatacttgaagaaaataaacatcgattactcttcattattgtcttattataaaagtcacaattt 31113822  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    ||| | |||||||| ||||||| |||||    
T  31113823 ttttaaaaataatacatgtgatgaaaat 31113850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 27 - 191
Target Start/End: Original strand, 32076225 - 32076387
Alignment:
Q  27 ttaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaata--cttgaagaaaataagcattga 124  Q
    ||||||||| ||||||||||| ||||||| |||| | || ||||   ||||||||||||| || ||| ||||||| |  |||||||||||||| ||||||    
T  32076225 ttaaatttaggatatgatacgactaagatacgttgaaaaaaaaa---ttatactaaaactcatatgtgtgtaaaaaagacttgaagaaaataaacattga 32076321  T
Q  125 ttactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    ||||||||||||||||||| ||||||||| ||||||| |||||| |||||||| |||||||||||||    
T  32076322 ttactctttattattatattattataaaaatcacaattttttaa-aaataatacatgtgatcaaaat 32076387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 29230810 - 29230932
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttta 167  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||| | |||||||||||||| |||||| ||| ||||||||||| | ||| ||||     
T  29230810 aaaaatttataataaaacttatatgtatgtaaaatacttgaagaaaattaacattgattactcttcattattgtattattataaaagttataattttttc 29230909  T
Q  168 agaaataatatatgtgatcaaaat 191  Q
    | |||||||| |||||||||||||    
T  29230910 a-aaataatacatgtgatcaaaat 29230932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 7057435 - 7057323
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatac-ttgaagaaaataagcattgatta 127  Q
    ||||||| |||| ||||||| |||||| ||||| |||   |||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  7057435 aaatttaggatacgatacggttaagatacgttagcaa---aaattttatactaaaatttatatgtatgtaaaatactttgaagaaaataagcattgatta 7057339  T
Q  128 ctctttattattatat 143  Q
    |||||  |||||||||    
T  7057338 ctcttccttattatat 7057323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 19099745 - 19099903
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||| |||| ||||||| || ||| ||||||||| ||    |||||| |||||||||| ||||||||||||||||||||||||| | ||  ||||||    
T  19099745 aaatttaggatacgatacggttatgatacgttaacaaaaa----tttatagtaaaacttatatgtatgtaaaatacttgaagaaaattaacaccgattac 19099840  T
Q  129 tctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||| |||||| ||| |||| |||||| ||||| |||| | | |||||| |||||||||||||    
T  19099841 tcttcattattgtattattaaaaaagttacaatttttttaaatataatacatgtgatcaaaat 19099903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 28470050 - 28470178
Alignment:
Q  64 aacaaaaattttatac-taaaacttatgtgtatgtaaaatacttgaagaaaataa-gcattgattactctttattattatatcattataaaagtcacaat 161  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||||| |||| || | |||||||| |||| |||||||||| | |||||||||||||||    
T  28470050 aacaaaaattttatacctaaaatttatatgtatgtaaaatacttgaaaaaaaaaaagtattgattattcttcattattatattaatataaaagtcacaat 28470149  T
Q  162 gttttaagaaataatatatgtgatcaaaat 191  Q
     |||||| |||||||| ||||||| |||||    
T  28470150 tttttaa-aaataatacatgtgattaaaat 28470178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 2627789 - 2627884
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| ||||||| |||||| ||||||||   |||||||||||||||||||||| |||||||||||||||| |||||||||| |||| ||||    
T  2627789 aaatttaggatacgatacggttaagatacgttaaca---aaaattttatactaaaacttatatgtatgtaaaatacttcaagaaaataaacattaatta 2627884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 8802538 - 8802664
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    ||||||||  |||||||||||||||| |  |||||||||| || || |||||||||||| ||||||||| |||||||||| ||||||||| ||||| | |    
T  8802538 aacaaaaaaattatactaaaacttatatacatgtaaaatatttaaaaaaaataagcatttattactcttcattattatattattataaaattcacacttt 8802637  T
Q  164 tttaagaaataatatatgtgatcaaaat 191  Q
    ||||| |||||| | ||||||| |||||    
T  8802638 tttaa-aaataaaacatgtgataaaaat 8802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 39700747 - 39700834
Alignment:
Q  66 caaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaa 153  Q
    ||||| ||||| |||||||||||| || |||||||| ||||||| |||||||||||||||| ||||| |||||||||| |||||||||    
T  39700747 caaaatttttaaactaaaacttatatgcatgtaaaacacttgaaaaaaataagcattgattgctcttcattattatattattataaaa 39700834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 16755799 - 16755926
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgt 163  Q
    |||||||| |||||||||||| |||| || | ||| | |||| |||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||| |    
T  16755799 aacaaaaaatttatactaaaatttatatgcacgtaca-tactagaagaaaataagcattgattactcttcattgttatattattataaaagttacaattt 16755897  T
Q  164 tt-taagaaataatatatgtgatcaaaat 191  Q
    ||  || |||||||  |||||||||||||    
T  16755898 ttaaaaaaaataatgcatgtgatcaaaat 16755926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 8229581 - 8229486
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| |||||| ||||||| |||||| || |||   |||||| |||||||||| ||||||||||||||||||||||||||| |||| ||||    
T  8229581 aaatttaggatacgatacgactaagatacgttaataaaaaa---tttatattaaaacttatatgtatgtaaaatacttgaagaaaataaacattaatta 8229486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 34764495 - 34764591
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgt--aaaatacttgaagaaaataagcattgatt 126  Q
    |||||||||||| |||||| ||||||| |||||||||    | |||||||||||||||||| | |||||  |||||||||||||||||||| ||||||||    
T  34764495 aaatttaagatacgatacgtctaagatacgttaacaa----atttttatactaaaacttatatatatgtgtaaaatacttgaagaaaataaacattgatt 34764590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 191
Target Start/End: Original strand, 31210624 - 31210705
Alignment:
Q  109 agaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    ||||||||||||||  |||||||| |||||||||| ||||||||||||| |||||||| | ||| |||| |||||||||||||    
T  31210624 agaaaataagcattagttactcttcattattatattattataaaagtcaaaatgttttga-aaaaaatacatgtgatcaaaat 31210705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 161
Target Start/End: Complemental strand, 39936042 - 39935914
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||| |||| ||||| |||||||| |||| ||||   |  ||||||||||||||| || ||  || |||| |||||||| |||||| ||||||||||    
T  39936042 aaatttaggatacgatacagctaagatacgttgacaa---actttttatactaaaactcatatgagtgaaaaa-acttgaaggaaataaacattgattac 39935947  T
Q  129 tctttattattatatcattataaaagtcacaat 161  Q
    ||  ||||||||||| |||||||||||||||||    
T  39935946 tccctattattatattattataaaagtcacaat 39935914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 141
Target Start/End: Complemental strand, 27925856 - 27925795
Alignment:
Q  80 taaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattat 141  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| ||| ||| ||||||||    
T  27925856 taaaacttatatgtatgtaaaatacttgaaaaaaataagcattgactacccttcattattat 27925795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 36907046 - 36906953
Alignment:
Q  43 atacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattatt 139  Q
    ||||||||||||| |||||||||   |  ||||||||||||| |||| || ||||||||| ||||||||||||||| ||  ||||||||| ||||||    
T  36907046 atacggctaagatacgttaacaa---attttttatactaaaatttatatgcatgtaaaattcttgaagaaaataaggatcaattactcttcattatt 36906953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 26565247 - 26565152
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| ||||| | |||||| |||||||||   |||||| |||||||||||||  |||||||||||||||||| |||||  | |||||||||    
T  26565247 aaatttaggatacgatacagttaagatacgttaacaa---aaatttaatactaaaacttaaatgtatgtaaaatacttgatgaaaacgaacattgatta 26565152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 124 - 191
Target Start/End: Complemental strand, 36906930 - 36906865
Alignment:
Q  124 attactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    ||||||||| |||||| ||| ||||||||||||||||| |||||| ||||||||||| ||||||||||    
T  36906930 attactcttcattattctattattataaaagtcacaat-ttttaa-aaataatatatatgatcaaaat 36906865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 114
Target Start/End: Complemental strand, 39329816 - 39329734
Alignment:
Q  28 taaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaa 114  Q
    ||||||||||||| ||||||||||| || ||||||||| |    |||||||||||||||||| |||||| || ||||||||| ||||    
T  39329816 taaatttaagatacgatacggctaaaatacgttaacaagat---ttttatactaaaacttatatgtatg-aatatacttgaaaaaaa 39329734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 155
Target Start/End: Complemental strand, 41368979 - 41368919
Alignment:
Q  95 tgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagt 155  Q
    ||||||||| |||||||||||||||||| || |||||| |||||| | | |||||||||||    
T  41368979 tgtaaaatagttgaagaaaataagcattaatcactcttcattattttcttattataaaagt 41368919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 34511099 - 34511046
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataa 117  Q
    |||||||||| ||||||||||||| | | ||| ||||||||||||| |||||||    
T  34511099 aacaaaaattctatactaaaacttgtatatatttaaaatacttgaaaaaaataa 34511046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 8e-31; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 72 - 180
Target Start/End: Complemental strand, 26079648 - 26079541
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaa 171  Q
    |||||||||||||||||| || |||||||||||||||||||||| |  ||||||||||||| |||||||||| ||||||||||||||||| |||||| ||    
T  26079648 ttttatactaaaacttatatgaatgtaaaatacttgaagaaaatcacaattgattactcttcattattatattattataaaagtcacaat-ttttaaaaa 26079550  T
Q  172 ataatatat 180  Q
    |||||||||    
T  26079549 ataatatat 26079541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 16591152 - 16591280
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaat-g 162  Q
    ||||||||||||||| |||||||||| || |||||||||||||||||||||| || ||||||||||||| |||||||||| ||||||||| || ||||      
T  16591152 aacaaaaattttataataaaacttatatgcatgtaaaatacttgaagaaaatcagtattgattactcttcattattatattattataaaactcgcaatct 16591251  T
Q  163 ttttaagaaataatatatgtgatcaaaat 191  Q
    ||||   |||||||| |||||||||||||    
T  16591252 ttttttaaaataatagatgtgatcaaaat 16591280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 29 - 153
Target Start/End: Original strand, 11755410 - 11755531
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||| |||||||||| |||||||| |||||||||   |  ||||||| ||||||||||| | |||||||||||||||||||||||| ||||||||||    
T  11755410 aaatttaggatatgatactgctaagatacgttaacaa---attttttatattaaaacttatgcgcatgtaaaatacttgaagaaaataaacattgattac 11755506  T
Q  129 tctttattattatatcattataaaa 153  Q
    |||| |||||||||  |||||||||    
T  11755507 tcttgattattatactattataaaa 11755531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 191
Target Start/End: Original strand, 24728275 - 24728409
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactc--------tttattattatatcattataaaagt 155  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||        || |||||||| | |||||||||||    
T  24728275 aacaaaaaatttatactaaaacttatttgtatgtaaaatacttgaagaaaataaacatcgattactcttcattatttaattattatcttattataaaagt 24728374  T
Q  156 cacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||| |||||| |||||||||||||||| |||||    
T  24728375 cacaattttttaa-aaataatatatgtgatgaaaat 24728409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 31431065 - 31431147
Alignment:
Q  75 tatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtca 157  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  31431065 tatactaaaacttatatgcatgtaaaatacttgaagaaaataagcattgattaatctttatgattatattattataaaagtca 31431147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 191
Target Start/End: Complemental strand, 9410292 - 9410137
Alignment:
Q  30 aatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattact 129  Q
    |||||| |||| ||||||| |||||| ||||||||| |||    ||||| |||||||||| |||||| |||||||||||||||||| | |||||||||||    
T  9410292 aatttaggatacgatacggttaagatacgttaacaaaaaa----ttataataaaacttatatgtatgaaaaatacttgaagaaaattaacattgattact 9410197  T
Q  130 ctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    ||| |||||| ||| ||| ||||||| ||||| |||||| |||| ||| |||||||||||||    
T  9410196 cttcattattgtattattgtaaaagttacaat-ttttaa-aaattatacatgtgatcaaaat 9410137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 64 - 141
Target Start/End: Complemental strand, 13003640 - 13003563
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattat 141  Q
    |||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  13003640 aacaaaaaatttatactaaaacttatatgtatgtaaaatatttgaagaaaataaacattgattactcttcattattat 13003563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 191
Target Start/End: Original strand, 11789072 - 11789227
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattac 128  Q
    ||||||| |||| ||||||| || ||| |||||||||    ||||||||| |||||||||| ||||||||||||| | ||||||||| | |||||  |||    
T  11789072 aaatttaggatacgatacggttaggatacgttaacaa----aattttataataaaacttatatgtatgtaaaatattcgaagaaaattaacattg--tac 11789165  T
Q  129 tctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||| |||||| ||| ||||||||||| | ||| |||||| |||||||| |||||||||||||    
T  11789166 tcttcattattgtattattataaaagttataattttttaa-aaataatacatgtgatcaaaat 11789227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 67 - 191
Target Start/End: Original strand, 18928291 - 18928414
Alignment:
Q  67 aaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttt 166  Q
    ||||| ||||||||| ||||||  |||||||||||||||||||  || ||| ||||||||| ||||||||||||||| | ||||||||||| ||| |||     
T  18928291 aaaaaatttatactagaacttaaatgtatgtaaaatacttgaatgaagtaaacattgattattctttattattatattaatataaaagtcaaaat-ttta 18928389  T
Q  167 aagaaataatatatgtgatcaaaat 191  Q
     | |||||||| |||||||||||||    
T  18928390 caaaaataatacatgtgatcaaaat 18928414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 189
Target Start/End: Complemental strand, 37232217 - 37232050
Alignment:
Q  19 gaaatttattaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttga-agaaaataa 117  Q
    ||||||| | ||||| |||||| |||| ||||||||| ||||||||| | |   |||||| ||||| |||| || ||||||||||||| | | |||||||    
T  37232217 gaaatttttaaaattcaagatacgatatggctaagatacgttaacaaaata---tttatattaaaatttatatgcatgtaaaatacttaacaaaaaataa 37232121  T
Q  118 gcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaa 189  Q
    ||||||||||||||| | || ||||| |  |||||||||||||| ||  || ||||||||||||||||||||    
T  37232120 gcattgattactcttcaatactatataagcataaaagtcacaat-ttacaaaaaataatatatgtgatcaaa 37232050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 23877194 - 23877289
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| |||||||||||||| ||||||||| |||   ||||||||| ||||||| |||| |||||||||||||||||||||| |||| ||||    
T  23877194 aaatttaggatacgatacggctaagatacgttaacaaaaaa---tttatactacaacttatatgtaagtaaaatacttgaagaaaataaacattaatta 23877289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 132
Target Start/End: Complemental strand, 18322130 - 18322071
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctt 132  Q
    ||||||| |||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  18322130 ttttatattaaaacttatatgcatgtaaaatacttgaag-aaataagcattgattactctt 18322071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 24888505 - 24888596
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttt 166  Q
    |||||||||||||| ||| ||||||||||||||||   |||||||| | | |||||||||| | |||||| | ||||||||||||||||| ||||    
T  24888505 ttttatactaaaacctatttgtatgtaaaatactt---gaaaataaacttcgattactcttcactattatgttattataaaagtcacaatttttt 24888596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 83 - 127
Target Start/End: Original strand, 17748755 - 17748799
Alignment:
Q  83 aacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||    
T  17748755 aacttatatgtatgtaaaatacttgaagaaaataaacattgatta 17748799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 79 - 127
Target Start/End: Complemental strand, 32856262 - 32856214
Alignment:
Q  79 ctaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  32856262 ctaaaacttatatgtatgtaaaatacttgaacaaaataaacattgatta 32856214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 14180495 - 14180429
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactct 131  Q
    |||||||  |||||||||||| |||| ||  ||||||||||||||| |||||||||||||||||||||    
T  14180495 aacaaaatatttatactaaaatttatatgcgtgtaaaatacttgaa-aaaataagcattgattactct 14180429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 12007070 - 12007029
Alignment:
Q  112 aaataagcattgattactctttattattatatcattataaaa 153  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  12007070 aaataagcattgattactcttgattattatattattataaaa 12007029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 11991087 - 11991016
Alignment:
Q  119 cattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgatcaaaat 191  Q
    |||||||||||||| |||||||| | ||||||||||||||||| |||| | |||||| |  ||||||||||||    
T  11991087 cattgattactcttcattattattttattataaaagtcacaattttttta-aaataaaacgtgtgatcaaaat 11991016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 166
Target Start/End: Complemental strand, 25430407 - 25430316
Alignment:
Q  72 ttttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtttt 166  Q
    |||||||||||||| ||| | ||||||||||||||   |||||||| | | |||||||| | |||||||| | |||||||||| |||||| ||||    
T  25430407 ttttatactaaaacctatttctatgtaaaatactt---gaaaataaacttcgattactcgtcattattattttattataaaagacacaatttttt 25430316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 75 - 157
Target Start/End: Original strand, 9136455 - 9136538
Alignment:
Q  75 tatactaaaacttatgtgtatgtaaaatacttgaagaaaa-taagcattgattactctttattattatatcattataaaagtca 157  Q
    |||||||||| |||| || ||||||||||||| || |||| |||||||||||| ||||| | || ||||| || ||||||||||    
T  9136455 tatactaaaatttatatgcatgtaaaatactttaaaaaaaataagcattgatttctcttcaatactatataatcataaaagtca 9136538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 105 - 161
Target Start/End: Original strand, 31332375 - 31332433
Alignment:
Q  105 ttgaagaaaataagcattgattactctttattattatat--cattataaaagtcacaat 161  Q
    ||||||||||||| ||||||||||| ||||| |||||||   |||||||||||||||||    
T  31332375 ttgaagaaaataaacattgattactttttatcattatataatattataaaagtcacaat 31332433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 12007031 - 12006989
Alignment:
Q  111 aaaataagcattgattactctttattattatatcattataaaa 153  Q
    |||||||||||||||||||||| |||||||||  |||||||||    
T  12007031 aaaataagcattgattactcttgattattatactattataaaa 12006989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 86 - 191
Target Start/End: Original strand, 32340024 - 32340128
Alignment:
Q  86 ttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgat 185  Q
    |||| |||||||||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||||||||||| |||||| |||||||| |||| ||    
T  32340024 ttatatgtatgtaaaatacttgaagaaaatatgcattggttactcttcattattatattattataaaagtcacaattttttaa-aaataatacatgtaat 32340122  T
Q  186 caaaat 191  Q
    ||||||    
T  32340123 caaaat 32340128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 30928641 - 30928564
Alignment:
Q  66 caaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatat 143  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  30928641 caaaaattttatactaaaacttatatatatgtaaaatacttgaagaaaataaacattgattacccttcattattatat 30928564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 29 - 127
Target Start/End: Complemental strand, 7435112 - 7435016
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| ||||||  |||||| |||||||||  |||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||    
T  7435112 aaatttaggatacgatacgagtaagatacgttaacaa--aaaattttatactaaaacttctatgtatgtaaaatacttgaagaaaataaacattgatta 7435016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 22297087 - 22297211
Alignment:
Q  64 aacaaaaattttatactaaaacttatg------tgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtca 157  Q
    |||||||| |||||||||||||||||       || |||||||||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||     
T  22297087 aacaaaaaatttatactaaaacttatactcttatgcatgtaaaatacttgaagaaaatgaacattgattactctttattgttatattattataaaagtcg 22297186  T
Q  158 caatgttttaagaaataatatatgtg 183  Q
    |||| |||||| |||||||| |||||    
T  22297187 caat-ttttaaaaaataatacatgtg 22297211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 65 - 168
Target Start/End: Complemental strand, 22054429 - 22054330
Alignment:
Q  65 acaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgtt 164  Q
    |||||| ||||||||||||||| |||||   |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||  |||||||||| ||    
T  22054429 acaaaatttttatactaaaactcatgtga--gtaaaatacttgaagaaaataaacattggttactctttattattatattattat--aagtcacaatttt 22054334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 2032083 - 2032208
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattata---tcattataaaagtcacaatgtt 164  Q
    |||| |||||| |||||||||| ||||||||||||||||||||||||| | | ||||||||| || |||||| ||   | ||||||||||| ||||| ||    
T  2032083 aaaaatttataataaaacttatatgtatgtaaaatacttgaagaaaattaacgttgattacttttcattattgtattgttattataaaagttacaatttt 2032182  T
Q  165 ttaagaaataatatatgtgatcaaaat 191  Q
    |||| |||||||| |||||||||||||    
T  2032183 ttaa-aaataatacatgtgatcaaaat 2032208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 29 - 127
Target Start/End: Original strand, 2987959 - 2988054
Alignment:
Q  29 aaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||||| |||| |||||||||||||| ||||||||| || |   |||||||||| ||||| ||||||||||||||||||||||||||| |||||||||    
T  2987959 aaatttaggatacgatacggctaagatacgttaacaaaaaca---ttatactaaaccttatatgtatgtaaaatacttgaagaaaataaacattgatta 2988054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 151
Target Start/End: Complemental strand, 8486374 - 8486248
Alignment:
Q  20 aaatttattaaatttaagatatgatacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagc 119  Q
    |||||| | ||||||| |||| |||||||||||||| || ||||||      |||||||||||||||||| |  |||||||||| |||||| ||||||||    
T  8486374 aaatttttaaaatttaggatacgatacggctaagatacgataacaatt----ttttatactaaaacttatattcatgtaaaatagttgaag-aaataagc 8486280  T
Q  120 attgattactctttattattatatcattataa 151  Q
    |||||||| |||| |||||||||  |||||||    
T  8486279 attgattaatcttgattattatactattataa 8486248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 68 - 191
Target Start/End: Original strand, 687815 - 687937
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta---ctctttattattatatcattataaaagtcacaatgtt 164  Q
    |||| |||||| ||||| |||| ||||||||||||| ||||||||||| | |||||||||   ||||| |||||| |   ||||||||||| ||||| ||    
T  687815 aaaaatttataataaaatttatatgtatgtaaaataattgaagaaaattaacattgattattgctcttcattattgt---attataaaagttacaatttt 687911  T
Q  165 ttaagaaataatatatgtgatcaaaat 191  Q
    |||| |||||||  |||||||||||||    
T  687912 ttaa-aaataatgcatgtgatcaaaat 687937  T

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Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 6108187 - 6108283
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaa-----atacttgaagaaaa--taagcattgattactctttattattatatcattataaaa 153  Q
    ||||||||||||||||||||| |||| || ||||||      ||||||||| ||||  |||||||||||||||||| |||||||||| |||||||||    
T  6108187 aacaaaaattttatactaaaatttatatgcatgtaatgtaacatacttgaaaaaaaagtaagcattgattactcttcattattatattattataaaa 6108283  T

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Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 10229702 - 10229642
Alignment:
Q  67 aaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    ||||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||| ||||    
T  10229702 aaaaaatttatactaaaacatatatgtatgtaaaatacttgaacaaaataaacattcatta 10229642  T

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Target: scaffold0015 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 38279 - 38376
Alignment:
Q  43 atacggctaagattcgttaacaacaaaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattata 142  Q
    ||||||||||||| |||||||||   |  ||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||| ||| |||||||||    
T  38279 atacggctaagatacgttaacaa---attttttatattaaaacttatatgtatgtaaaatacttgaagaaaataaacattgattacccttcattattata 38375  T

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Target: scaffold0565 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 8274 - 8170
Alignment:
Q  86 ttatgtgtatgtaaaatacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaatgttttaagaaataatatatgtgat 185  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||| |||||| ||| ||||||||||| | ||| |||||| |||||||| ||||| |    
T  8274 ttatatgtatgtaaaatacttgaagaaaattaacattgattactcttcattattgtattattataaaagttataattttttaa-aaataatacatgtggt 8176  T
Q  186 caaaat 191  Q
    ||||||    
T  8175 caaaat 8170  T

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Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 101 - 161
Target Start/End: Complemental strand, 8360 - 8300
Alignment:
Q  101 atacttgaagaaaataagcattgattactctttattattatatcattataaaagtcacaat 161  Q
    ||||||||||||||||||||||||||| | || |||||||| | |||||||||||||||||    
T  8360 atacttgaagaaaataagcattgattatttttcattattatgttattataaaagtcacaat 8300  T

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Target: scaffold0495 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 6416 - 6357
Alignment:
Q  68 aaaattttatactaaaacttatgtgtatgtaaaatacttgaagaaaataagcattgatta 127  Q
    |||| ||||||||||||| ||| ||||||||||||||||||| ||||||| |||| ||||    
T  6416 aaaaatttatactaaaacatatatgtatgtaaaatacttgaacaaaataaacattcatta 6357  T

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Target: scaffold0464 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 105
Target Start/End: Original strand, 5894 - 5935
Alignment:
Q  64 aacaaaaattttatactaaaacttatgtgtatgtaaaatact 105  Q
    |||||||||||||||||||||||| | ||| |||||||||||    
T  5894 aacaaaaattttatactaaaacttgtatgtttgtaaaatact 5935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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