View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15896_high_29 (Length: 237)
Name: NF15896_high_29
Description: NF15896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15896_high_29 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 42080704 - 42080926
Alignment:
| Q |
1 |
acatgtattcattctcttattattgagtatacgaaataaggttatttctgttaaaaaagtttatccgaagtataattggaaatagtttcttgttagtaga |
100 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
42080704 |
acatgtattcattctcttattattgattatacgaaataaggttatttctgttaaaaaagttcatccgaagtataattggaaatagtttcttgttagtaga |
42080803 |
T |
|
| Q |
101 |
agttatgtcaatagtttacactggcatcaaaggaaggataattttttcctctcacttgtttagatgttaattttagatgcaccaattatggaatctttca |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42080804 |
agttatgttaatagtttacactggcatcaaaggaaggataattttttcctctcacttgtttagatgttaattttagatgcaccaattatggaatctttcg |
42080903 |
T |
|
| Q |
201 |
ttttcctactatttttctacgtc |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
42080904 |
ttttcctactatttttctacgtc |
42080926 |
T |
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