View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15896_high_8 (Length: 494)
Name: NF15896_high_8
Description: NF15896
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15896_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 18 - 279
Target Start/End: Original strand, 6099170 - 6099431
Alignment:
| Q |
18 |
attgtaattaagtaagttgataaatgaaaaactttttgaagagacaattgttgaagcaacgaagtatgcacgaaggaaggagggagggagggggtgcgta |
117 |
Q |
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| T |
6099170 |
attgtaattaagtgagttgataaatgaaaaactttttgaagagacaattgttgaagcaacgaagtatgcacgaaggaaggagggagggagggggtgcgta |
6099269 |
T |
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| Q |
118 |
accaaaattagaacacaagtggtctaatttttgcaagcttgctctgtttctcgtcagcacacaactttacattggttataagtaatgtcttatcaaagag |
217 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6099270 |
accaaaattagaacacaagtggtccaatttttgcaagcttgctccgtttttcgtcagcacacaactttacattggttataagtaatgtcttatcaaagag |
6099369 |
T |
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| Q |
218 |
aggggttagaaannnnnnngcaattaattagtgaagagtgtttgtttgatgataattaagga |
279 |
Q |
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| T |
6099370 |
aggggttagaattttttttgcaattaattagtgaagagtgattgtttgatgataattaagga |
6099431 |
T |
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