View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15897_high_7 (Length: 237)

Name: NF15897_high_7
Description: NF15897
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15897_high_7
NF15897_high_7
[»] chr4 (20 HSPs)
chr4 (1-214)||(16523229-16523443)
chr4 (1-214)||(19020876-19021089)
chr4 (1-216)||(14499843-14500061)
chr4 (1-216)||(32460334-32460552)
chr4 (1-214)||(9795616-9795830)
chr4 (1-214)||(19697015-19697227)
chr4 (1-214)||(19707600-19707812)
chr4 (1-127)||(8045355-8045483)
chr4 (46-174)||(9295962-9296090)
chr4 (160-214)||(18169522-18169576)
chr4 (160-204)||(14996688-14996732)
chr4 (138-214)||(37477688-37477764)
chr4 (166-209)||(7131719-7131762)
chr4 (53-100)||(18248662-18248710)
chr4 (160-214)||(10644766-10644818)
chr4 (160-214)||(27954594-27954646)
chr4 (133-174)||(8056417-8056458)
chr4 (21-69)||(122310-122358)
chr4 (182-214)||(8378740-8378772)
chr4 (21-69)||(18293293-18293341)
[»] chr6 (23 HSPs)
chr6 (9-214)||(18823018-18823223)
chr6 (1-215)||(16299620-16299835)
chr6 (9-214)||(18838881-18839078)
chr6 (1-214)||(15741858-15742068)
chr6 (62-215)||(19629782-19629934)
chr6 (1-171)||(32276437-32276608)
chr6 (1-174)||(13620484-13620659)
chr6 (1-174)||(18002178-18002343)
chr6 (138-215)||(16240565-16240642)
chr6 (142-214)||(1556540-1556612)
chr6 (150-214)||(1657393-1657457)
chr6 (160-214)||(10489256-10489310)
chr6 (160-214)||(15863035-15863089)
chr6 (160-214)||(22225384-22225438)
chr6 (160-214)||(22251212-22251266)
chr6 (160-204)||(4991630-4991674)
chr6 (160-214)||(16555780-16555834)
chr6 (160-214)||(16632336-16632390)
chr6 (160-214)||(16376041-16376093)
chr6 (160-214)||(16383365-16383417)
chr6 (47-97)||(23123296-23123344)
chr6 (160-214)||(25951668-25951720)
chr6 (23-69)||(35014926-35014972)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-214)||(48588-48802)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-214)||(49487-49701)
[»] chr3 (33 HSPs)
chr3 (1-216)||(14285372-14285590)
chr3 (1-214)||(9302776-9302990)
chr3 (1-214)||(11476830-11477044)
chr3 (1-214)||(15936285-15936501)
chr3 (1-214)||(15938127-15938343)
chr3 (9-209)||(12901750-12901947)
chr3 (1-174)||(19947110-19947283)
chr3 (138-214)||(14842219-14842295)
chr3 (21-104)||(30153381-30153465)
chr3 (160-214)||(15468002-15468056)
chr3 (160-214)||(25059293-25059347)
chr3 (138-208)||(22275739-22275809)
chr3 (166-214)||(16821696-16821744)
chr3 (163-209)||(49232996-49233042)
chr3 (166-214)||(12264439-12264486)
chr3 (138-214)||(18911524-18911600)
chr3 (21-69)||(38168354-38168402)
chr3 (1-100)||(16933716-16933818)
chr3 (21-69)||(7854420-7854468)
chr3 (21-69)||(17955746-17955794)
chr3 (21-69)||(28558611-28558659)
chr3 (21-69)||(33342315-33342363)
chr3 (49-100)||(44229425-44229477)
chr3 (21-69)||(55513308-55513356)
chr3 (22-69)||(3992989-3993036)
chr3 (157-216)||(11881834-11881893)
chr3 (22-69)||(17912266-17912313)
chr3 (21-68)||(54037891-54037938)
chr3 (160-214)||(1467384-1467438)
chr3 (21-69)||(2050231-2050279)
chr3 (165-209)||(14527703-14527747)
chr3 (182-214)||(44229559-44229591)
chr3 (21-69)||(45582071-45582119)
[»] chr2 (19 HSPs)
chr2 (1-220)||(28030864-28031083)
chr2 (1-214)||(7507490-7507706)
chr2 (9-214)||(23777696-23777902)
chr2 (1-214)||(17204743-17204958)
chr2 (21-209)||(22284396-22284586)
chr2 (21-216)||(22275163-22275360)
chr2 (1-174)||(15633622-15633797)
chr2 (64-216)||(22256331-22256485)
chr2 (1-174)||(33128456-33128635)
chr2 (151-215)||(16936137-16936201)
chr2 (151-215)||(17006797-17006861)
chr2 (160-214)||(42177617-42177671)
chr2 (160-214)||(11230983-11231037)
chr2 (160-214)||(22512830-22512884)
chr2 (160-214)||(24685427-24685481)
chr2 (49-100)||(21142335-21142387)
chr2 (21-69)||(43642748-43642796)
chr2 (160-214)||(28775454-28775506)
chr2 (182-214)||(5888290-5888322)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-214)||(13002-13216)
scaffold0032 (138-209)||(107812-107883)
[»] chr8 (26 HSPs)
chr8 (1-214)||(16038521-16038735)
chr8 (1-216)||(21494087-21494305)
chr8 (1-214)||(2545348-2545561)
chr8 (1-214)||(22147839-22148052)
chr8 (1-214)||(18612807-18613010)
chr8 (150-214)||(13661911-13661975)
chr8 (150-214)||(13720574-13720638)
chr8 (138-214)||(22005906-22005982)
chr8 (160-214)||(16195784-16195838)
chr8 (1-100)||(3431022-3431124)
chr8 (160-214)||(17142678-17142731)
chr8 (160-214)||(22088439-22088493)
chr8 (138-215)||(17346110-17346187)
chr8 (160-214)||(271005-271059)
chr8 (160-214)||(644861-644915)
chr8 (160-214)||(830596-830650)
chr8 (160-214)||(15318804-15318858)
chr8 (160-214)||(15499173-15499227)
chr8 (160-209)||(30121268-30121316)
chr8 (21-69)||(274881-274929)
chr8 (21-69)||(640920-640968)
chr8 (21-69)||(826726-826774)
chr8 (160-214)||(24549527-24549579)
chr8 (157-215)||(19330944-19331002)
chr8 (21-66)||(16404772-16404817)
chr8 (21-69)||(24716631-24716679)
[»] chr5 (17 HSPs)
chr5 (1-216)||(7529311-7529529)
chr5 (1-214)||(17909906-17910119)
chr5 (1-214)||(34939678-34939891)
chr5 (138-214)||(23515092-23515168)
chr5 (160-214)||(10777617-10777671)
chr5 (138-214)||(16106194-16106270)
chr5 (138-214)||(17471236-17471312)
chr5 (1-99)||(9730125-9730226)
chr5 (160-214)||(21932047-21932101)
chr5 (160-214)||(21938217-21938271)
chr5 (160-214)||(23542849-23542902)
chr5 (160-214)||(35582593-35582647)
chr5 (160-214)||(22882731-22882783)
chr5 (160-214)||(29187938-29187990)
chr5 (160-214)||(36989415-36989469)
chr5 (160-215)||(19500444-19500497)
chr5 (21-69)||(21651129-21651177)
[»] scaffold0387 (1 HSPs)
scaffold0387 (1-214)||(6831-7044)
[»] chr7 (34 HSPs)
chr7 (9-214)||(18253496-18253699)
chr7 (1-214)||(47480675-47480893)
chr7 (142-214)||(15759763-15759835)
chr7 (160-214)||(15950440-15950494)
chr7 (150-214)||(15862457-15862521)
chr7 (138-214)||(14250547-14250623)
chr7 (160-214)||(2438014-2438068)
chr7 (160-214)||(15516496-15516549)
chr7 (1-68)||(15862309-15862376)
chr7 (3-100)||(371503-371603)
chr7 (160-206)||(26009799-26009844)
chr7 (160-214)||(27101282-27101336)
chr7 (160-214)||(27108630-27108684)
chr7 (160-214)||(38783374-38783428)
chr7 (21-69)||(16212187-16212235)
chr7 (49-100)||(16418937-16418989)
chr7 (21-69)||(32493812-32493860)
chr7 (160-214)||(7823264-7823316)
chr7 (160-214)||(7830575-7830627)
chr7 (160-214)||(10989960-10990012)
chr7 (160-214)||(12899849-12899901)
chr7 (160-214)||(27176969-27177021)
chr7 (21-69)||(111038-111086)
chr7 (21-69)||(126853-126901)
chr7 (21-69)||(2029355-2029403)
chr7 (21-69)||(3050022-3050070)
chr7 (21-69)||(3060386-3060434)
chr7 (21-69)||(7283825-7283873)
chr7 (49-100)||(10000134-10000186)
chr7 (182-214)||(16419071-16419103)
chr7 (21-69)||(17817228-17817276)
chr7 (21-69)||(19049725-19049773)
chr7 (21-69)||(25124566-25124614)
chr7 (182-214)||(48622326-48622358)
[»] scaffold0207 (2 HSPs)
scaffold0207 (1-209)||(18109-18319)
scaffold0207 (157-216)||(11245-11304)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-214)||(34107-34322)
[»] scaffold0615 (1 HSPs)
scaffold0615 (1-209)||(5849-6058)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-214)||(95382-95598)
[»] scaffold0023 (5 HSPs)
scaffold0023 (1-214)||(60854-61071)
scaffold0023 (160-214)||(449-503)
scaffold0023 (160-214)||(153655-153709)
scaffold0023 (160-214)||(36639-36692)
scaffold0023 (160-208)||(169564-169611)
[»] scaffold0574 (1 HSPs)
scaffold0574 (1-214)||(9143-9360)
[»] scaffold0173 (1 HSPs)
scaffold0173 (1-209)||(5632-5832)
[»] scaffold0001 (1 HSPs)
scaffold0001 (62-214)||(164629-164780)
[»] scaffold0066 (2 HSPs)
scaffold0066 (1-216)||(45422-45640)
scaffold0066 (1-216)||(54808-55026)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-174)||(3586-3762)
[»] scaffold0125 (2 HSPs)
scaffold0125 (1-122)||(42048-42170)
scaffold0125 (131-209)||(43464-43542)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-174)||(5250-5426)
[»] scaffold0118 (2 HSPs)
scaffold0118 (1-127)||(34128-34257)
scaffold0118 (176-216)||(34083-34123)
[»] scaffold0303 (1 HSPs)
scaffold0303 (1-214)||(4090-4294)
[»] chr1 (9 HSPs)
chr1 (1-100)||(20254714-20254813)
chr1 (138-214)||(22228340-22228416)
chr1 (138-214)||(22233037-22233113)
chr1 (166-214)||(15861054-15861102)
chr1 (160-214)||(17005195-17005249)
chr1 (21-69)||(21860449-21860497)
chr1 (160-214)||(38054759-38054811)
chr1 (182-214)||(20254895-20254927)
chr1 (21-69)||(44034740-44034788)
[»] scaffold0761 (1 HSPs)
scaffold0761 (138-214)||(1223-1299)
[»] scaffold0225 (1 HSPs)
scaffold0225 (138-214)||(22764-22840)
[»] scaffold0026 (2 HSPs)
scaffold0026 (9-85)||(108145-108221)
scaffold0026 (138-214)||(108271-108347)
[»] scaffold0022 (1 HSPs)
scaffold0022 (138-214)||(4860-4936)
[»] scaffold0369 (1 HSPs)
scaffold0369 (138-214)||(4254-4330)
[»] scaffold0175 (3 HSPs)
scaffold0175 (138-214)||(612-688)
scaffold0175 (160-209)||(17584-17633)
scaffold0175 (21-69)||(15308-15356)
[»] scaffold0682 (1 HSPs)
scaffold0682 (157-216)||(8192-8251)
[»] scaffold0139 (2 HSPs)
scaffold0139 (160-214)||(13707-13761)
scaffold0139 (160-214)||(20762-20816)
[»] scaffold1615 (1 HSPs)
scaffold1615 (138-214)||(43-119)
[»] scaffold0529 (1 HSPs)
scaffold0529 (138-214)||(3492-3568)
[»] scaffold0092 (1 HSPs)
scaffold0092 (138-214)||(10397-10473)
[»] scaffold1500 (1 HSPs)
scaffold1500 (160-214)||(1162-1216)
[»] scaffold0191 (1 HSPs)
scaffold0191 (160-214)||(7105-7158)
[»] scaffold0028 (1 HSPs)
scaffold0028 (160-214)||(131129-131182)
[»] scaffold0008 (1 HSPs)
scaffold0008 (160-214)||(31325-31378)
[»] scaffold0367 (1 HSPs)
scaffold0367 (166-215)||(16938-16986)
[»] scaffold0447 (1 HSPs)
scaffold0447 (138-214)||(59-135)
[»] scaffold0383 (1 HSPs)
scaffold0383 (138-214)||(2923-2999)
[»] scaffold0107 (1 HSPs)
scaffold0107 (160-214)||(31866-31920)
[»] scaffold0076 (1 HSPs)
scaffold0076 (160-214)||(39660-39714)
[»] scaffold0706 (1 HSPs)
scaffold0706 (21-69)||(6311-6359)
[»] scaffold0597 (1 HSPs)
scaffold0597 (21-69)||(751-799)
[»] scaffold0516 (1 HSPs)
scaffold0516 (49-100)||(11891-11943)
[»] scaffold0465 (1 HSPs)
scaffold0465 (21-69)||(9755-9803)
[»] scaffold0310 (1 HSPs)
scaffold0310 (21-69)||(6173-6221)
[»] scaffold0215 (2 HSPs)
scaffold0215 (49-100)||(9112-9164)
scaffold0215 (49-100)||(16010-16062)
[»] scaffold0132 (1 HSPs)
scaffold0132 (21-69)||(42789-42837)
[»] scaffold0077 (1 HSPs)
scaffold0077 (21-69)||(15236-15284)
[»] scaffold0025 (1 HSPs)
scaffold0025 (21-69)||(147022-147070)
[»] scaffold0004 (1 HSPs)
scaffold0004 (21-69)||(193265-193313)
[»] scaffold0003 (2 HSPs)
scaffold0003 (49-100)||(7649-7701)
scaffold0003 (182-214)||(7783-7815)
[»] scaffold0376 (1 HSPs)
scaffold0376 (160-214)||(4-56)
[»] scaffold0247 (1 HSPs)
scaffold0247 (160-214)||(23255-23307)
[»] scaffold1164 (1 HSPs)
scaffold1164 (21-67)||(1815-1861)
[»] scaffold0213 (1 HSPs)
scaffold0213 (161-214)||(29746-29797)
[»] scaffold0876 (1 HSPs)
scaffold0876 (21-66)||(208-253)
[»] scaffold0892 (1 HSPs)
scaffold0892 (182-214)||(3982-4014)
[»] scaffold0686 (1 HSPs)
scaffold0686 (21-69)||(5646-5694)
[»] scaffold0507 (1 HSPs)
scaffold0507 (157-209)||(1162-1214)
[»] scaffold0234 (1 HSPs)
scaffold0234 (21-69)||(17177-17225)
[»] scaffold0218 (1 HSPs)
scaffold0218 (21-69)||(4954-5002)
[»] scaffold0162 (1 HSPs)
scaffold0162 (21-69)||(26213-26261)
[»] scaffold0106 (1 HSPs)
scaffold0106 (21-69)||(42148-42196)
[»] scaffold0039 (1 HSPs)
scaffold0039 (21-69)||(12286-12334)
[»] scaffold0034 (1 HSPs)
scaffold0034 (21-65)||(80302-80346)
[»] scaffold0020 (1 HSPs)
scaffold0020 (157-205)||(108582-108630)
[»] scaffold0018 (1 HSPs)
scaffold0018 (21-69)||(50978-51026)
[»] scaffold0017 (2 HSPs)
scaffold0017 (182-214)||(44135-44167)
scaffold0017 (182-214)||(54438-54470)


Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 16523229 - 16523443
Alignment:
Q  1 tcttcaagttt-ccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16523229 tcttcaagttttccccctttgctaacccttgttcttcctttcactcactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaatt 16523328  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16523329 tctctccaagtttaggtttaggtatgctacaactcaattgggctcaattctagaccctagtgggcttaacccattctaacacaattctaaaaagtttcta 16523428  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  16523429 tacactcaacggtaa 16523443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 19020876 - 19021089
Alignment:
Q  1 tcttcaagtttcccccttt-gctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  19020876 tcttcaagtttcccccttttgctaacccttgttcttcctttcactcactttctctctctacctctctctaactt-gtgaaatgaaatgaatgaatgaatt 19020974  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19020975 tctctccaagtttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttcta 19021074  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  19021075 tacactcaacggtaa 19021089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 14500061 - 14499843
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaat 98  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||||||| | |||||||||||    
T  14500061 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctatcaaactttgtgaaatgaaaaggaatgaatgaat 14499962  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    |||||||||||||| |||||| | |||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14499961 ttctctccaagttttaggtttggatatgctccaactcaattgggctcaattctagaccctagtaggcttaacccattctaacataattctaaaaagtttc 14499862  T
Q  198 tatacactcaacagtaaat 216  Q
    |||||||||||| ||||||    
T  14499861 tatacactcaacggtaaat 14499843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 32460552 - 32460334
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaat-gaatgaatgaat 98  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  32460552 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaaaagaatgaatgaat 32460453  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    |||||||||||||| |||||||| |||||| ||||||| ||||| ||| ||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  32460452 ttctctccaagttttaggtttagatatgctccaactcatttgggttcaattctagaccctagtggatttaacccattctaacataactctaaaaagtttc 32460353  T
Q  198 tatacactcaacagtaaat 216  Q
    |||||||||||| ||||||    
T  32460352 tatacactcaacggtaaat 32460334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 9795616 - 9795830
Alignment:
Q  1 tcttcaagttt-ccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  9795616 tcttcaagttttccccctttgctaacccttgttcttcctttcactcactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaatt 9795715  T
Q  100 tctctcc-aagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttct 198  Q
     |||||| || ||||||||||||| || | | ||||||||||| ||| |||||||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  9795716 cctctccaaattttaggtttaggtgtgttcccactcaattgggatcaattctagaccctaatgggcttaacccattctaacacaattct-aaaagtttct 9795814  T
Q  199 atacactcaacagtaa 214  Q
    | ||||||||| ||||    
T  9795815 aaacactcaacggtaa 9795830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 19697227 - 19697015
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||  | |||||||||| |||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  19697227 tcttcaagtttctccctttctcaaacccttgttattcctttctccctctttctctctctacctctctctaactt-gtgaaatgaaatgaatgaatgaatt 19697129  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||||| | || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  19697128 tctctccaagtttaggtttag-tgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattttaaaaagtttcta 19697030  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  19697029 tacactcaacggtaa 19697015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 19707812 - 19707600
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||  | |||||||||| |||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  19707812 tcttcaagtttctccctttctcaaacccttgttattcctttctccctctttctctctctacctctctctaactt-gtgaaatgaaatgaatgaatgaatt 19707714  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||||| | || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  19707713 tctctccaagtttaggtttag-tgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattttaaaaagtttcta 19707615  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  19707614 tacactcaacggtaa 19707600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 8045355 - 8045483
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatg-aaatgaatg-aatgaa 97  Q
    |||||||||||| ||||||  ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||||| ||||||    
T  8045355 tcttcaagtttctccctttctctaacccttgttcttcctttctccctctttctctctctacctctctctaactttgtgaaatgaaaatgaatgaaatgaa 8045454  T
Q  98 tttctctccaagtttaggtttaggtatgct 127  Q
    |||||||||||| |||||||||||| ||||    
T  8045455 tttctctccaag-ttaggtttaggtgtgct 8045483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 46 - 174
Target Start/End: Original strand, 9295962 - 9296090
Alignment:
Q  46 actttctctctctacatctctctaactttgtgaaatgaaatgaatgaa-tgaatttctctccaagtttaggtttaggtatgctacaactcaattgggctc 144  Q
    ||||||| ||||||| |||||||||||| |||||||||||||||| || |||||| ||| || |  |||||||||||| ||||  |  ||||||||||||    
T  9295962 actttctttctctacctctctctaactt-gtgaaatgaaatgaataaaatgaattactcccccaagttaggtttaggtgtgctctatttcaattgggctc 9296060  T
Q  145 agttctagaccctagtgggcttaacccatt 174  Q
    | ||||| || |||||||||||||||||||    
T  9296061 aattctaaactctagtgggcttaacccatt 9296090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 18169522 - 18169576
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18169522 tgggcctaacccattctaacataattctaaaaagtttctatacactcaacggtaa 18169576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 14996688 - 14996732
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacac 204  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  14996688 tgggcctaacccattctaacataattctaaaaagtttctatacac 14996732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 37477688 - 37477764
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||||    
T  37477688 tgggctcaattctaaattctaatgggcctaactcattctaacataactctaaaaagtttctatacactcaacggtaa 37477764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 7131762 - 7131719
Alignment:
Q  166 taacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  7131762 taacccattctaacataactctaaaaagtttctatacactcaac 7131719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 18248662 - 18248710
Alignment:
Q  53 ctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||||||||    
T  18248662 ctctctacatctctctaacttagtgaaatgaaaaggaatgaatgaattt 18248710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 10644766 - 10644818
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  10644766 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 10644818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 27954594 - 27954646
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  27954594 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 27954646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 8056417 - 8056458
Alignment:
Q  133 tcaattgggctcagttctagaccctagtgggcttaacccatt 174  Q
    ||||||||||||| ||||| || |||||||||||||||||||    
T  8056417 tcaattgggctcaattctaaactctagtgggcttaacccatt 8056458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 122310 - 122358
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| | |||||||||||||||| ||||||||    
T  122310 ctaacccttgttcttctcttctctcactttctctctctacctctctcta 122358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 8378740 - 8378772
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  8378740 aattctaaaaagtttctatacactcaacggtaa 8378772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 18293341 - 18293293
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    |||||||||||| |||  ||| |||||||||||||||||| ||||||||    
T  18293341 ctaacccttgttattctcttctcccactttctctctctacctctctcta 18293293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 186; Significance: 1e-101; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 18823223 - 18823018
Alignment:
Q  9 tttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatttctctccaa 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  18823223 tttccccctttgctaacccttgttcttcctttcactcactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaatttctctccaa 18823124  T
Q  109 gtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaa 208  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18823123 gtttaggtttaggtatgctacaactcaattgggctcaattctagaccctagtgggcttaacccattctaacacaattctaaaaagtttctatacactcaa 18823024  T
Q  209 cagtaa 214  Q
    | ||||    
T  18823023 cggtaa 18823018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 16299835 - 16299620
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  16299835 tcttcaagtttcaccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaatt 16299736  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    |||||||||||||| |||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16299735 tctctccaagtttaagtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttcta 16299636  T
Q  200 tacactcaacagtaaa 215  Q
    |||||||||| |||||    
T  16299635 tacactcaacggtaaa 16299620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 18839078 - 18838881
Alignment:
Q  9 tttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatttctctccaa 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||    
T  18839078 tttccccctttgctaacccttgttcttcctttcactcactttctctctct--------ctaactttgtgaaatgaaatgaatgaatgaatttctctccaa 18838987  T
Q  109 gtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaa 208  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  18838986 gtttaggtttaggtatgctacaactcaattgggctcaattctagaccctagtgggcttaacccattctaacacaattctaaaaagtttttatacactcaa 18838887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15742068 - 15741858
Alignment:
Q  1 tcttcaagtttccccctttgc-taacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||   |||||||||||||||||||| ||| ||||||||||  || ||||| |||||| |||||||||||||||||||||||||    
T  15742068 tcttcaagtttctccctttctataacccttgttcttcctttctccctctttctctct--acctctctataactt-gtgaaatgaaatgaatgaatgaatt 15741972  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||| ||||||||||||| || | | ||||||||||||||| || ||||||||| ||||||||||||||||||||  ||||||||||||||||||    
T  15741971 tctctccaattttaggtttaggtgtgttcccactcaattgggctcaatt-tagaccctaatgggcttaacccattctaacgcaattctaaaaagtttcta 15741873  T
Q  200 tacactcaacagtaa 214  Q
    |||| ||||| ||||    
T  15741872 tacattcaacggtaa 15741858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 62 - 215
Target Start/End: Original strand, 19629782 - 19629934
Alignment:
Q  62 tctctctaactttgtgaaatgaaatgaatgaatgaatttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtg 161  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| || | | ||||||||||||||  |||||||||||| ||    
T  19629782 tctctctaactt-gtgaaatgaaatgaatgaatgaatttctccccaagtttaggtttaggtgtgttcccactcaattgggctccattctagaccctaatg 19629880  T
Q  162 ggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaa 215  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  19629881 ggcttaacccattctaacacaattctaaaaagtttctatacactcaacggtaaa 19629934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 32276608 - 32276437
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaat 98  Q
    |||||||| ||||||||||  |||||||||||||||| ||||  |||||||||||||||||  ||||||||||||||||||||||| | |||||||||||    
T  32276608 tcttcaagcttccccctttctctaacccttgttcttcatttcttccactttctctctctac--ctctctaactttgtgaaatgaaaaggaatgaatgaat 32276511  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaaccc 171  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||    
T  32276510 ttctctccaagttttaggtttaggtatgctccaactcaattgggctcaattctagaccctactgggcttaaccc 32276437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 13620659 - 13620484
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaa-tgaatgaatgaat 98  Q
    ||||||||||| |||||||  |||||||||||| |||||||||| |||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  13620659 tcttcaagttttcccctttctctaacccttgtttttcctttcactcactttctctctctacctc-ctctaactttgtgaaatgaaaatgaatgaatgaat 13620561  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccatt 174  Q
    |||||||||||||| |||| ||||||||||  | |||||||||||||| ||||| ||||||||||||||||||||||    
T  13620560 ttctctccaagttttaggtctaggtatgctctatctcaattgggctcaattctataccctagtgggcttaacccatt 13620484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 18002343 - 18002178
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| || |||  ||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||        ||||||||    
T  18002343 tcttcaagtttctccttttctctaacccttgttcttcctttctcccactttctctctctacctctctctaac-ttgtgaaatga--------aatgaatt 18002253  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccatt 174  Q
    |||| || |  |||||||||||| ||||  |  ||||||||||||| ||||| || |||||||||||||||||||    
T  18002252 tctcccccaagttaggtttaggtgtgctctatttcaattgggctcaattctaaactctagtgggcttaacccatt 18002178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 16240565 - 16240642
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaa 215  Q
    |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||    
T  16240565 tgggctcaattctaaaccctaatgggcttaacccattctaacataattctaaaaagttcttatacactcaacggtaaa 16240642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 1556540 - 1556612
Alignment:
Q  142 ctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1556540 ctcaattctagaccttaatgggcttaacccattctaacataattctaaaaagtttctatatactcaacggtaa 1556612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 1657457 - 1657393
Alignment:
Q  150 tagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  1657457 tagaccctaatgggcttaacccattctaacacaattctaaaaagtttctatacactcaacggtaa 1657393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 10489256 - 10489310
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  10489256 tgggcctaactcattctaacataattctaaaaagtttctatacactcaacggtaa 10489310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 15863035 - 15863089
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  15863035 tgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 15863089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 22225438 - 22225384
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  22225438 tgggcctaactcattctaacataattctaaaaagtttctatacactcaacggtaa 22225384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 22251266 - 22251212
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  22251266 tgggcctaactcattctaacataattctaaaaagtttctatacactcaacggtaa 22251212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 4991630 - 4991674
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacac 204  Q
    ||||| |||||||||||||||||||||||||||||||||||||||    
T  4991630 tgggcctaacccattctaacataattctaaaaagtttctatacac 4991674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 16555834 - 16555780
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||| ||||    
T  16555834 tgggcctaactcattctaacataattccaaaaagttcctatacactcaacggtaa 16555780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 16632390 - 16632336
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||| ||||    
T  16632390 tgggcctaactcattctaacataattccaaaaagttcctatacactcaacggtaa 16632336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 16376093 - 16376041
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  16376093 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 16376041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 16383417 - 16383365
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  16383417 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 16383365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 23123296 - 23123344
Alignment:
Q  47 ctttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaa 97  Q
    ||||||||||||||  |||||||| ||||||||||||||| ||||||||||    
T  23123296 ctttctctctctac--ctctctaagtttgtgaaatgaaataaatgaatgaa 23123344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 25951720 - 25951668
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  25951720 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 25951668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 69
Target Start/End: Complemental strand, 35014972 - 35014926
Alignment:
Q  23 aacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  35014972 aacccttgttcttctcttctcccactttctctctctacctctctcta 35014926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 48588 - 48802
Alignment:
Q  1 tcttcaagtttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaa-tgaaatgaatgaatgaatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  48588 tcttcaagtttccccctttgctaacccttgttcttcctttcactcactttctctctctacctctctctaactttgtgaaaatgaaatgaatgaatgaatt 48687  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||| ||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  48688 tctctccaagtttaggttttggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttcta 48787  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  48788 tacactcaacggtaa 48802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 49701 - 49487
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49701 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaatt 49602  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    |||||| |||||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49601 tctctctaagtttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttcta 49502  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  49501 tacactcaacggtaa 49487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 159; Significance: 8e-85; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 14285372 - 14285590
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaat 98  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  14285372 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaaaggaatgaatgaat 14285471  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    |||||||||||||| |||||||| |||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14285472 ttctctccaagttttaggtttagatatgctccatctcaattgggctcaattctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 14285571  T
Q  198 tatacactcaacagtaaat 216  Q
    |||||||||||| ||||||    
T  14285572 tatacactcaacggtaaat 14285590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 9302990 - 9302776
Alignment:
Q  1 tcttcaagtttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||| ||||||| ||||||||||||||||||||||||||||||||||||||     
T  9302990 tcttcaagtttccccctttgctaacccttgttcttcctttcactccctttctatctctacctctctctaactttgtgaaatgaaatgaatgaatgaattc 9302891  T
Q  101 ctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    | ||||||| ||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  9302890 cactccaagttttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattctaaaaagtttcta 9302791  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  9302790 tacactcaacggtaa 9302776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 11477044 - 11476830
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  11477044 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgcgaaatgaaatgaatgaatgaatt 11476945  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    |||||||||||||||||||| || || | | ||||||||||||||| |||||||||||| ||| |||||| |||||||||||||||||||||||||| ||    
T  11476944 tctctccaagtttaggtttaagtgtgttcccactcaattgggctcaattctagaccctaatggacttaactcattctaacataattctaaaaagtttata 11476845  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  11476844 tacactcaacggtaa 11476830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15936501 - 15936285
Alignment:
Q  1 tcttcaagttt-ccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaa--tgaatgaatgaa 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  15936501 tcttcaagttttccccctttgctaacccttgttcttcctttcactcactttctctctctacttctctctaactttgtgaaatgaaaagtgaatgaatgaa 15936402  T
Q  98 tttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    || |||||||||||||||||||||| || | | |||| |||||||||| | |||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  15936401 ttcctctccaagtttaggtttaggtgtgttcccactctattgggctcaatcctagactctaatgggcttaacccattctaacataattctaaaaagtttc 15936302  T
Q  198 tatacactcaacagtaa 214  Q
    |||||||||||| ||||    
T  15936301 tatacactcaacggtaa 15936285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 15938343 - 15938127
Alignment:
Q  1 tcttcaagttt-ccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaa--tgaatgaatgaa 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||  ||||||||||||    
T  15938343 tcttcaagttttccccctttgctaacccttgttcttcctttcactcactttctctctctacttctctctatctttgtgaaatgaaaagtgaatgaatgaa 15938244  T
Q  98 tttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    || | |||||||||||||||||||| || | | |||| |||||||||| | || ||||||| ||||||||||||||||||||||||||| ||||||||||    
T  15938243 ttcccctccaagtttaggtttaggtgtgttcccactctattgggctcaatcctggaccctaatgggcttaacccattctaacataattccaaaaagtttc 15938144  T
Q  198 tatacactcaacagtaa 214  Q
    |||||||||||| ||||    
T  15938143 tatacactcaacggtaa 15938127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 209
Target Start/End: Complemental strand, 12901947 - 12901750
Alignment:
Q  9 tttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatttctctccaa 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||    |||| |||| ||||||||    
T  12901947 tttccccctttgctaacccttgttcttcctttcactcactttctctctctacctctctctaattttgtgaaatgaaat----gaataaattcctctccaa 12901852  T
Q  109 g-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactca 207  Q
    | ||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  12901851 gttttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattctaaaaagtttctaaacactca 12901752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 19947110 - 19947283
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||  ||||||||||||||||||||| | |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  19947110 tcttcaagtttctccctttctctaacccttgttcttcctttctcacactttctctctctacctctttctaactttgtgaaatgaaatgaatgaatgaatt 19947209  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccatt 174  Q
    |||||||||||||||||||||||||||| |||||||||||||||||   ||||   |||||||||||||||||||    
T  19947210 tctctccaagtttaggtttaggtatgctccaactcaattgggctca-acctaggttctagtgggcttaacccatt 19947283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 14842295 - 14842219
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  14842295 tgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttctatacactcaacggtaa 14842219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 30153381 - 30153465
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatga-atttctct 104  Q
    ||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||||||||| ||||||||    
T  30153381 ctaacccttgttcttcctttctcccactttctctctttacctctctctaactttgtgaaatgaaaagaatgaatgatatttctct 30153465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 15468056 - 15468002
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15468056 tgggcctaacccattctaacataattctaaaaagtttctatacactcaacggtaa 15468002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 25059293 - 25059347
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25059293 tgggcgtaacccattctaacataattctaaaaagtttctatacactcaacggtaa 25059347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 208
Target Start/End: Original strand, 22275739 - 22275809
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaa 208  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  22275739 tgggctcaattctaaattctaatgggcctaacccattctaacataattctaaaaagtttctatatactcaa 22275809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 16821696 - 16821744
Alignment:
Q  166 taacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  16821696 taactcattctaacataattctaaaaagtttctatacactcaacggtaa 16821744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 209
Target Start/End: Original strand, 49232996 - 49233042
Alignment:
Q  163 gcttaacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||    
T  49232996 gcttaactcattctaacataattccaaaaagtttctatacactcaac 49233042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 12264486 - 12264439
Alignment:
Q  166 taacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  12264486 taacccattctaacataattct-aaaagtttctatacactcaacggtaa 12264439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 18911524 - 18911600
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||| |||||||||||||| |||| ||||| ||||    
T  18911524 tgggctcaattctaaattctaatgggcctaacccattctaacataactctaaaaagtttctgtacattcaacggtaa 18911600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 38168354 - 38168402
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||    
T  38168354 ctaacccttgttcttctcttctcccactttctctctctacatctctcta 38168402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 16933818 - 16933716
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacc---cactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatg 95  Q
    ||||||||||| |||||||  ||||||||||||||||||| ||||   ||||| |||||||| | |||||||||||| |||||||| ||| |||||||||    
T  16933818 tcttcaagttttcccctttctctaacccttgttcttcctt-cacctctcactt-ctctctcttcctctctctaacttagtgaaatgaaaaggaatgaatg 16933721  T
Q  96 aattt 100  Q
    |||||    
T  16933720 aattt 16933716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 7854420 - 7854468
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  7854420 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 7854468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 17955794 - 17955746
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  17955794 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 17955746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 28558611 - 28558659
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  28558611 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 28558659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 33342315 - 33342363
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  33342315 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 33342363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 44229425 - 44229477
Alignment:
Q  49 ttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  44229425 ttctctctctacctctctctaacttagtgaaatgaaaaggaatgaatgaattt 44229477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 55513308 - 55513356
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  55513308 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 55513356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Original strand, 3992989 - 3993036
Alignment:
Q  22 taacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  3992989 taacccttgttcttctcttctcccactttctctctctacctctctcta 3993036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 11881893 - 11881834
Alignment:
Q  157 tagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaat 216  Q
    |||||| ||||||||| || ||| ||||||||||| ||||||| ||||||||| ||||||    
T  11881893 tagtggacttaacccactccaacttaattctaaaatgtttctacacactcaacggtaaat 11881834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 69
Target Start/End: Complemental strand, 17912313 - 17912266
Alignment:
Q  22 taacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    |||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  17912313 taacccttgttcttctcttctcccactttctctctctacctctctcta 17912266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 68
Target Start/End: Complemental strand, 54037938 - 54037891
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctct 68  Q
    ||||||||||||||||  ||| |||||||||||||||||| |||||||    
T  54037938 ctaacccttgttcttctcttctcccactttctctctctacctctctct 54037891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 1467438 - 1467384
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| ||| |||||||||||| ||||||||||||| |||||||| ||||    
T  1467438 tgggcctaactcatcctaacataattccaaaaagtttctatccactcaacggtaa 1467384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 2050231 - 2050279
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| ||||||||||||||| || ||||||||    
T  2050231 ctaacccttgttcttctcttctcccactttctctctccacctctctcta 2050279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 209
Target Start/End: Complemental strand, 14527747 - 14527703
Alignment:
Q  165 ttaacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    ||||||||||| ||| ||||||||||| ||||||| |||||||||    
T  14527747 ttaacccattccaacttaattctaaaatgtttctacacactcaac 14527703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 44229559 - 44229591
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  44229559 aattctaaaaagtttctatacactcaacggtaa 44229591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 45582071 - 45582119
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    |||||| |||||||||  ||| |||||||||||||||||| ||||||||    
T  45582071 ctaaccattgttcttctcttctcccactttctctctctacctctctcta 45582119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 8e-82; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 28031083 - 28030864
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaa-tgaaatgaatgaatgaat 98  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  28031083 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactt-ctctctctacctctctctaactttgtgaaaatgaaatgaatgaatgaat 28030985  T
Q  99 ttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttct 198  Q
    ||||||||||||||||||| || |||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28030984 ttctctccaagtttaggtt-agatatgctccatctcaattgggctcaattctagaccctagtgggcttaacccattctaacataattctaaaaagtttct 28030886  T
Q  199 atacactcaacagtaaatcact 220  Q
    ||||||| ||| ||||||||||    
T  28030885 atacactgaacggtaaatcact 28030864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 7507706 - 7507490
Alignment:
Q  1 tcttcaag-tttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaa--tgaatgaatgaa 97  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||  ||||||||||||    
T  7507706 tcttcaagctttccccctttgctaacccttgttcttcctttcactcactttctctctctacccctctctaactttgtgaaatgaaaaatgaatgaatgaa 7507607  T
Q  98 tttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    ||||||||||||||||| ||||||| || | | ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7507606 tttctctccaagtttagatttaggtgtgttcccactcaatcgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttc 7507507  T
Q  198 tatacactcaacagtaa 214  Q
    |||||||||||| ||||    
T  7507506 tatacactcaacggtaa 7507490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 23777902 - 23777696
Alignment:
Q  9 tttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatttctctccaa 108  Q
    |||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  23777902 tttccccctttgctaacccttgttgttcctttcactcactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaattcctctccaa 23777803  T
Q  109 g-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactca 207  Q
    | ||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||    
T  23777802 gttttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattctaaaaagtttctaaacactca 23777703  T
Q  208 acagtaa 214  Q
    || ||||    
T  23777702 acggtaa 23777696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 17204743 - 17204958
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||    
T  17204743 tcttcaagtttcgccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttataaaatgaaatgaatgaatgaatt 17204842  T
Q  100 tctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttct 198  Q
    |||||||||| |||| |||||||| || | | ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||    
T  17204843 tctctccaagttttaagtttaggtgtgttcccactcaattgggctcaattctagacgctaatgggcttaacccattgtaacataattctaaaaagtttct 17204942  T
Q  199 atacactcaacagtaa 214  Q
    ||||||||||| ||||    
T  17204943 atacactcaacggtaa 17204958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 22284396 - 22284586
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaatttctctccaagttt-aggttt 118  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||    
T  22284396 ctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaaaggaatgaatgaatttctctccaagttttaggttt 22284495  T
Q  119 aggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    || ||||||  |  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22284496 agatatgctctatttcaattgggctcaattctagaccctagtgggcttaacccattctaacataattctaaaaagtttccatacactcaac 22284586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 21 - 216
Target Start/End: Original strand, 22275163 - 22275360
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaatttctctccaagttt-aggttt 118  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | ||| ||||||||||||| ||||||| ||||||    
T  22275163 ctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaaaggaataaatgaatttctcttcaagttttaggttt 22275262  T
Q  119 aggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaat 216  Q
    || |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||  ||||||||||| ||||||    
T  22275263 agatatgctccaactcaattgggctcaattctagaccctagtaggcttaacccattctaacctaattctaaaaagttttcatacactcaacggtaaat 22275360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 15633622 - 15633797
Alignment:
Q  1 tcttcaagtttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaatt 99  Q
    ||||||||||||||| ||  ||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||    
T  15633622 tcttcaagtttcccctttctctaacccttgttcttcctttctcccactttctctctctacctctctataactttgtgaaatgaaaaggaatgaatgaatt 15633721  T
Q  100 tctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccatt 174  Q
    |||||||||| |||| |||| |||||||| || |||||||||||| | ||||||||||||||||||||||||||||    
T  15633722 tctctccaagttttaagttttggtatgctccatctcaattgggcttaattctagaccctagtgggcttaacccatt 15633797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 216
Target Start/End: Original strand, 22256331 - 22256485
Alignment:
Q  64 tctctaactttgtgaaatgaaatg-aatgaatgaatttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtg 161  Q
    |||||||||||||||||||||| | ||||||||||||||| ||||||||| ||| |||| |||| | || |||||||||||||| |||||||||||||||    
T  22256331 tctctaactttgtgaaatgaaaaggaatgaatgaatttctgtccaagttttaggcttagatatgttccatctcaattgggctcaattctagaccctagtg 22256430  T
Q  162 ggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaat 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22256431 ggcttaacccattctaacataattctaaaaagtttctatacactcaacggtaaat 22256485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 33128456 - 33128635
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaa----tgaatgaa-t 94  Q
    |||||||||||| ||||||  ||||||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||||||||    |||||||| |    
T  33128456 tcttcaagtttctccctttctctaacccttgttcttcctttctcccactctctctctctacctctctctaactt-gtgaaatgaaaaaaatgaatgaaat 33128554  T
Q  95 gaatttctctcc-aagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccatt 174  Q
    ||||||||| || |||||||||||||| | ||||  |  ||||||||||||| ||||| || |||||||||||||||||||    
T  33128555 gaatttctcccccaagtttaggtttagatgtgctctatttcaattgggctcaattctaaactctagtgggcttaacccatt 33128635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 16936137 - 16936201
Alignment:
Q  151 agaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaa 215  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  16936137 agaccctaatgggcttaacccattctaacacaattctaaaaagtttctatacactcaacggtaaa 16936201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 17006797 - 17006861
Alignment:
Q  151 agaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaa 215  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  17006797 agaccctaatgggcttaacccattctaacacaattctaaaaagtttctatacactcaacggtaaa 17006861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 42177671 - 42177617
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  42177671 tgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 42177617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 11231037 - 11230983
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  11231037 tgggcctaactcattctaacataattccaaaaagtttctatacactcaacggtaa 11230983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 22512884 - 22512830
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  22512884 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 22512830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 24685481 - 24685427
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| |||||||| ||||||||||||| ||||    
T  24685481 tgggcctaactcattctaacataattccaaaaagttcctatacactcaacggtaa 24685427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 21142335 - 21142387
Alignment:
Q  49 ttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  21142335 ttctctctctacctctctctaacttagtgaaatgaaaaggaatgaatgaattt 21142387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 43642796 - 43642748
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||| ||||||  ||| |||||||||||||||||||||||||||    
T  43642796 ctaacccttcttcttctcttctcccactttctctctctacatctctcta 43642748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 28775506 - 28775454
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| ||||||||||||||||  ||||||||||||||||||||| ||||    
T  28775506 tgggcctaactcattctaacataattc--aaaagtttctatacactcaacggtaa 28775454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 5888322 - 5888290
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  5888322 aattctaaaaagtttctatacactcaacggtaa 5888290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 151; Significance: 5e-80; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 13216 - 13002
Alignment:
Q  1 tcttcaagtttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaattt 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  13216 tcttcaagttttcccctttgctaacccttgttcttcctttcactcactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaattc 13117  T
Q  101 ctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||| ||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  13116 ctctccaagttttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaaaacaattctaaaaagtttcta 13017  T
Q  200 tacactcaacagtaa 214  Q
     ||||||||| ||||    
T  13016 aacactcaacggtaa 13002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 107883 - 107812
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  107883 tgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttttatacactcaac 107812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 151; Significance: 5e-80; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 16038735 - 16038521
Alignment:
Q  1 tcttcaagtttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  16038735 tcttcaagtttccccctttgctaacccttgttcttcctttcactcactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaattc 16038636  T
Q  101 ctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||| ||||||||||||| || | | ||||||||||||| | ||||||| |||| ||||||||||||||||||| | ||||||||||||||||||    
T  16038635 ctctccaagttttaggtttaggtgtgttcccactcaattgggcttaattctagatcctaatgggcttaacccattctaatacaattctaaaaagtttcta 16038536  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  16038535 tacactcaacggtaa 16038521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 21494305 - 21494087
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaat 98  Q
    ||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| | |||||||| ||    
T  21494305 tcttcaagtttacccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaaaggaatgaatggat 21494206  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  21494205 ttctctccaagttttaggtttagatatgctccaactcaattgggctcaattctagaccctagtgggcttaaccaattctaacataactctaaaaagtttc 21494106  T
Q  198 tatacactcaacagtaaat 216  Q
    |||||||||||| ||||||    
T  21494105 tatacactcaacggtaaat 21494087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 2545348 - 2545561
Alignment:
Q  1 tcttcaagttt-ccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||  || ||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  2545348 tcttcaagttttccccctttgctaacccttgttcttcctttcattcaatttctctctctacctctctctaactt-gtgaaatgaaatgaatgaatgaatt 2545446  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||    
T  2545447 tctctccaagtttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattctaaaaagttttta 2545546  T
Q  200 tacactcaacagtaa 214  Q
     ||||||||| ||||    
T  2545547 aacactcaacggtaa 2545561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 22147839 - 22148052
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||  ||||||||| ||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  22147839 tcttcaagtttctccctttctctaacccttattcttcctttctccctctttctctctctacctctctctaactt-gtgaaatgaaatgaatgaatgaatt 22147937  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||| ||||||||||||| || | | |||||||||||||||  ||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  22147938 tctctccaattttaggtttaggtgtgttcccactcaattgggctcaactctagaccctaatgggcttaacccattctaacacaattctaaaaagtttcta 22148037  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  22148038 tacactcaacggtaa 22148052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 18612807 - 18613010
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    ||||||||| || ||||||  ||||||||||||||||||||||| |||||||||||||||          |||| |||||||||||||||||||||||||    
T  18612807 tcttcaagtatctccctttctctaacccttgttcttcctttcactcactttctctctcta----------actt-gtgaaatgaaatgaatgaatgaatt 18612895  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  18612896 tctctccaagtttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattctaaaaagtttcta 18612995  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  18612996 tacactcaacggtaa 18613010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 13661975 - 13661911
Alignment:
Q  150 tagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  13661975 tagaccctaatgggcttaacccattctaacacaattctaaaaagtttctatacactcaacggtaa 13661911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 13720638 - 13720574
Alignment:
Q  150 tagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  13720638 tagaccctaatgggcttaacccattctaacacaattctaaaaagtttctatacactcaacggtaa 13720574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 22005982 - 22005906
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22005982 tgggctcaattctaaattctaatgggcctaacccattctaacataattctaaaaagtttctatacactcaacggtaa 22005906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 16195784 - 16195838
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  16195784 tgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 16195838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 3431124 - 3431022
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacc---cactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatg 95  Q
    |||||||||||| ||||||  ||||||||||||||||||| ||||   ||||| |||||||||| |||||||||||| |||||||| ||| |||||||||    
T  3431124 tcttcaagtttctccctttctctaacccttgttcttcctt-cacctctcactt-ctctctctacctctctctaacttagtgaaatgaaaaggaatgaatg 3431027  T
Q  96 aattt 100  Q
    |||||    
T  3431026 aattt 3431022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 17142731 - 17142678
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17142731 tgggcctaacccattctaacataattct-aaaagtttctatacactcaacggtaa 17142678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 22088493 - 22088439
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||| ||||    
T  22088493 tgggcttaactcattctaacataattccaaaaagtttatatacactcaacggtaa 22088439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 17346110 - 17346187
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaa 215  Q
    |||||||| ||||| |  ||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| |||||    
T  17346110 tgggctcaattctaaattctaatgggcctaactcattctaacataactctaaaaagtttatatacactcaacggtaaa 17346187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 271059 - 271005
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  271059 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 271005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 644861 - 644915
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  644861 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 644915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 830596 - 830650
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  830596 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 830650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 15318858 - 15318804
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  15318858 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 15318804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 15499227 - 15499173
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  15499227 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 15499173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 30121268 - 30121316
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    ||||| ||||||||||||||| ||||| ||||||||||||||||||||||    
T  30121268 tgggcctaacccattctaacacaattc-aaaaagtttctatacactcaac 30121316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 274881 - 274929
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  274881 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 274929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 640968 - 640920
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  640968 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 640920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 826774 - 826726
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  826774 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 826726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 24549527 - 24549579
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  24549527 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 24549579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 19331002 - 19330944
Alignment:
Q  157 tagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaa 215  Q
    ||||||||||||||||  | | ||||||||||||||||||||| ||||| ||| |||||    
T  19331002 tagtgggcttaacccacccaatcataattctaaaaagtttctacacacttaacggtaaa 19330944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 16404817 - 16404772
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctct 66  Q
    |||||||||||||| |  |||||||||||||||||||||| |||||    
T  16404817 ctaacccttgttctgctcttcacccactttctctctctacctctct 16404772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 24716679 - 24716631
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| | |||||||||||||||| ||||||||    
T  24716679 ctaacccttgttcttctcttctcacactttctctctctacctctctcta 24716631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 7529311 - 7529529
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaat 98  Q
    |||||||||||||||||||  ||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  7529311 tcttcaagtttccccctttctctaacccttgttcttcctttctcgcactttctctctctacctctctctaactttgtgaaatgaaaaggaatgaatgaat 7529410  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    |||||||||||||| |||||| | |||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  7529411 ttctctccaagttttaggtttcgatatgctccaactcaattgggctcaattctagaccctagtgggcttaacccattctaacataactataaaaagtttc 7529510  T
Q  198 tatacactcaacagtaaat 216  Q
    |||||||||||||||||||    
T  7529511 tatacactcaacagtaaat 7529529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 17909906 - 17910119
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||    
T  17909906 tcttcaagtttccccctttctctaacccttgttcttcctttctccctctttctctctctacctctctctaactt-gtgaaatgaaatgaataaatgaatt 17910004  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||||||| || | | ||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  17910005 tctctccaagtttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaacgggcttaacccattctaacataattctaaaaagtttcta 17910104  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  17910105 tacactcaacggtaa 17910119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 34939678 - 34939891
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  34939678 tcttcaagtttctccctttctctaacccttgttcttcctttctccctctttctctctctacctctctctaactt-gtgaaatgaaatgaatgaatgaatt 34939776  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| ||    
T  34939777 tctctccaagtttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattctaaaaagtttata 34939876  T
Q  200 tacactcaacagtaa 214  Q
     ||||||||| ||||    
T  34939877 aacactcaacggtaa 34939891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 23515092 - 23515168
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||| ||||    
T  23515092 tgggctcaattctagaccctaatgggcttaaccatttctaacataattctaaaaagtttcgatacactcaacggtaa 23515168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 10777671 - 10777617
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10777671 tgggcctaacccattctaacataattctaaaaagtttctatacactcaacggtaa 10777617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 16106194 - 16106270
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  16106194 tgggctcaattctaaattctaatgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 16106270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 17471312 - 17471236
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  17471312 tgggctcaattctaaattctaatgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 17471236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9730226 - 9730125
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacc---cactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatg 95  Q
    |||||||||||| ||||||  ||||||||||||||||||| ||||   ||||| |||||||||| |||||||||||| |||||||| ||| |||||||||    
T  9730226 tcttcaagtttctccctttctctaacccttgttcttcctt-cacctctcactt-ctctctctacctctctctaacttagtgaaatgaaaaggaatgaatg 9730129  T
Q  96 aatt 99  Q
    ||||    
T  9730128 aatt 9730125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 21932101 - 21932047
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  21932101 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 21932047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 21938271 - 21938217
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  21938271 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 21938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 23542849 - 23542902
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||| |||||||| |||||||||||| ||||    
T  23542849 tgggcctaacccattctaacataattct-aaaagtttatatacactcaacggtaa 23542902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 35582593 - 35582647
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  35582593 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 35582647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 22882783 - 22882731
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| ||||||||||||||||  ||||||||||||||||||||| ||||    
T  22882783 tgggcctaactcattctaacataattc--aaaagtttctatacactcaacggtaa 22882731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 29187990 - 29187938
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  29187990 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 29187938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 36989469 - 36989415
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| ||| |||||||||||| ||||||||||||| |||||||| ||||    
T  36989469 tgggcctaactcatcctaacataattccaaaaagtttctatccactcaacggtaa 36989415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 19500444 - 19500497
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaa 215  Q
    ||||| || |||||||||||| |||||  ||||||||||||||||||||| |||||    
T  19500444 tgggcctagcccattctaacacaattc--aaaagtttctatacactcaacggtaaa 19500497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 21651129 - 21651177
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||| ||| ||||||||    
T  21651129 ctaacccttgttcttctcttctcccactttctctctatacctctctcta 21651177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 7044 - 6831
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||| ||||||  ||||||||||||||||||||| ||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  7044 tcttcaagtttctccctttctctaacccttgttcttcctttctccctctttctctctctacctctctctaactt-gtgaaatgaaatgaatgaatgaatt 6946  T
Q  100 tctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttcta 199  Q
    ||||||||||||||||||||||| || | | ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6945 tctctccaagtttaggtttaggtgtgttcccactcaatcgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttcta 6846  T
Q  200 tacactcaacagtaa 214  Q
    |||||||||| ||||    
T  6845 tacactcaacggtaa 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 9 - 214
Target Start/End: Complemental strand, 18253699 - 18253496
Alignment:
Q  9 tttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaa-tgaatgaatttctctcca 107  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||   |||||| ||||||||||||||||||    
T  18253699 tttccccctttgctaacccttgttcttcctttcactcactttctctctctacctctctctaactttgtgaaa---aatgaaatgaatgaatttctctcca 18253603  T
Q  108 agtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactca 207  Q
    |||||||||||||||||| | | | ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |    
T  18253602 agtttaggtttaggtatgttcccattcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttctatacactta 18253503  T
Q  208 acagtaa 214  Q
    || ||||    
T  18253502 acggtaa 18253496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 47480893 - 47480675
Alignment:
Q  1 tcttcaagtttccccctttg-ctaaccctt-gttcttcctttcacccacttt---ctctctctacatctctctaactttgtgaaatgaaatgaatgaatg 95  Q
    |||||||||||||||||||  ||||||||| |||||||||||| |||| |||   |||||||||| |||||||||||||||||||||||| |||||||||    
T  47480893 tcttcaagtttccccctttctctaaccctttgttcttcctttctcccaattttctctctctctacctctctctaactttgtgaaatgaaaagaatgaatg 47480794  T
Q  96 aatttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtt 195  Q
    ||||||||||||||||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47480793 aatttctctccaagtttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtt 47480694  T
Q  196 tctatacactcaacagtaa 214  Q
    |||||||| ||||| ||||    
T  47480693 tctatacattcaacggtaa 47480675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 15759835 - 15759763
Alignment:
Q  142 ctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||    
T  15759835 ctcaattctagaccttaatgggcttaacccattctaacataattctaaaaagtttctatatactcaacggtaa 15759763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 15950494 - 15950440
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15950494 tgggcctaacccattctaacataattctaaaaagtttctatacactcaacggtaa 15950440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 15862457 - 15862521
Alignment:
Q  150 tagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||||||  ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  15862457 tagaccctgatgggcttaacccattctaacacaattctaaaaagtttatatacactcaacggtaa 15862521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 14250623 - 14250547
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||| ||| ||||||||||||||||||||||||| ||||    
T  14250623 tgggctcaattctaaattctaatgggcctaacccattctaacttaactctaaaaagtttctatacactcaacggtaa 14250547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 2438014 - 2438068
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  2438014 tgggcctaactcattctaacataattctaaaaagtttctatacgctcaacggtaa 2438068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 15516549 - 15516496
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  15516549 tgggcctaacccattctaacataattct-aaaagtttctatacactcaacggtaa 15516496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15862309 - 15862376
Alignment:
Q  1 tcttcaagttt-ccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctct 68  Q
    ||||||||||| |||||||||||||||||||||||||  |||| || |||||||||||||| |||||||    
T  15862309 tcttcaagttttccccctttgctaacccttgttcttctcttca-cctctttctctctctacctctctct 15862376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 100
Target Start/End: Original strand, 371503 - 371603
Alignment:
Q  3 ttcaagtttccccctttg-ctaacccttgttcttccttt--cacccactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaat 98  Q
    |||||||||| ||||||  |||||||||||||||||||   | | ||||| |||||||||| |||||||||||| |||||||| ||| ||||||||||||    
T  371503 ttcaagtttctccctttctctaacccttgttcttccttaacctctcactt-ctctctctacctctctctaacttagtgaaatgaaaaggaatgaatgaat 371601  T
Q  99 tt 100  Q
    ||    
T  371602 tt 371603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 206
Target Start/End: Complemental strand, 26009844 - 26009799
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactc 206  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||    
T  26009844 tgggcctaacccattctaacataattc-aaaaagtttctatacactc 26009799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 27101336 - 27101282
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  27101336 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 27101282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 27108684 - 27108630
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  27108684 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 27108630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 38783428 - 38783374
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  38783428 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 38783374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 16212187 - 16212235
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  16212187 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 16212235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 16418937 - 16418989
Alignment:
Q  49 ttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  16418937 ttctctctctacctctctctaacttagtgaaatgaaaaggaatgaatgaattt 16418989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 32493860 - 32493812
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  32493860 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 32493812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 7823264 - 7823316
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  7823264 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 7823316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 7830575 - 7830627
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  7830575 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 7830627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 10989960 - 10990012
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  10989960 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 10990012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 12899849 - 12899901
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  12899849 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 12899901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 27176969 - 27177021
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  27176969 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 27177021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 111086 - 111038
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||| ||||||||| ||||||||    
T  111086 ctaacccttgttcttctcttctcccactttatctctctacctctctcta 111038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 126853 - 126901
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| || ||||||||||||||| ||||||||    
T  126853 ctaacccttgttcttctcttctccaactttctctctctacctctctcta 126901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 2029355 - 2029403
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    |||||||||| |||||  ||| |||||||||||||||||| ||||||||    
T  2029355 ctaacccttgctcttctcttctcccactttctctctctacctctctcta 2029403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 3050022 - 3050070
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||  ||||||||    
T  3050022 ctaacccttgttcttctcttctcccactttctctctctatctctctcta 3050070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 3060386 - 3060434
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| || |||||    
T  3060386 ctaacccttgttcttctcttctcccactttctctctctacctccctcta 3060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 7283873 - 7283825
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| | |||||||||||||||| ||||||||    
T  7283873 ctaacccttgttcttctcttctctcactttctctctctacctctctcta 7283825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 10000186 - 10000134
Alignment:
Q  49 ttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    |||||||||||| ||| |||||||| |||||||| ||| ||||||||||||||    
T  10000186 ttctctctctacctctttctaacttagtgaaatgaaaaggaatgaatgaattt 10000134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 16419071 - 16419103
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  16419071 aattctaaaaagtttctatacactcaacggtaa 16419103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 17817276 - 17817228
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||  ||||||||    
T  17817276 ctaacccttgttcttctcttctcccactttctctctctatctctctcta 17817228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 19049725 - 19049773
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||  ||||||||    
T  19049725 ctaacccttgttcttctcttctcccactttctctctctatctctctcta 19049773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 25124566 - 25124614
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    |||| |||||||||||  ||| |||||||||||||||||| ||||||||    
T  25124566 ctaatccttgttcttctcttctcccactttctctctctacctctctcta 25124614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 48622358 - 48622326
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  48622358 aattctaaaaagtttctatacactcaacggtaa 48622326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 144; Significance: 7e-76; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 18109 - 18319
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaat 98  Q
    |||||| ||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  18109 tcttcatgtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaaaggaatgaatgaat 18208  T
Q  99 ttctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    ||||||||||| ||||||||||| |||||| || |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18209 ttctctccaagttttaggtttagatatgctccatctcaattgggctcaattctagaccctagtgggcttaacccatt-taacataattctaaaaagtttc 18307  T
Q  198 tatacactcaac 209  Q
    ||||||||||||    
T  18308 tatacactcaac 18319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 11245 - 11304
Alignment:
Q  157 tagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaat 216  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  11245 tagtgggcttaacccattctaaaataattctaaaaagtttctatacactcaacggtaaat 11304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 34322 - 34107
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaa-tgaaatgaatgaatgaat 98  Q
    |||||||||||| ||||||  ||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||||||||||| ||     
T  34322 tcttcaagtttctccctttctctaacccttgttcttcctttctccctctttctctctctacctctctctaactttgtgaaaatgaaatgaatgaataaaa 34223  T
Q  99 ttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttct 198  Q
    ||||||||||||||||||| |||| || | | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34222 ttctctccaagtttaggttaaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttct 34123  T
Q  199 atacactcaacagtaa 214  Q
    ||||||||||| ||||    
T  34122 atacactcaacggtaa 34107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 6058 - 5849
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    ||||||||||| |||||||  |||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6058 tcttcaagttttcccctttctctaacccttgctcttcctttcactcactttctctctctacctctctctaactttgtgaaatgaaatgaatgaatgaatt 5959  T
Q  100 tctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttct 198  Q
     ||||| ||| ||||||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  5958 cctctctaagttttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaa-tttct 5860  T
Q  199 atacactcaac 209  Q
    |||||||||||    
T  5859 atacactcaac 5849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 131; Significance: 4e-68; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 95382 - 95598
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaa-tgaaat--gaatgaatga 96  Q
    |||||||||||| ||||||  ||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||| |||||   ||||||||||    
T  95382 tcttcaagtttctccctttctctaacccttgttcttcctttctctcactttctctctctacctctctctaactttgtgaaaatgaaaaaggaatgaatga 95481  T
Q  97 atttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagttt 196  Q
    ||||||||||||||| |||||||||| || | | ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  95482 atttctctccaagtt-aggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagttt 95580  T
Q  197 ctatacactcaacagtaa 214  Q
    ||||||||||||| ||||    
T  95581 ctatacactcaacggtaa 95598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 131; Significance: 4e-68; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 61071 - 60854
Alignment:
Q  1 tcttcaagttt-ccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaa--tgaatgaa 97  Q
    ||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||  ||  ||||||||    
T  61071 tcttcaagttttccccctttgctaacccttgttcttcctttcactcgctttctctctctacctctctctaactttgtgaaatgaaaaaaaaatgaatgaa 60972  T
Q  98 tttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagttt 196  Q
    || |||||||||||| |||||||||| || | | ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  60971 ttcctctccaagttttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattctaaaaagttt 60872  T
Q  197 ctatacactcaacagtaa 214  Q
    | ||||||||||| ||||    
T  60871 caatacactcaacggtaa 60854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 503 - 449
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||| ||||    
T  503 tgggcttaactcattctaacataattccaaaaagtttctatacactcaacggtaa 449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 153709 - 153655
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  153709 tgggcctaacctattctaacataattctaaaaagtttctatacactcaacggtaa 153655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 36639 - 36692
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  36639 tgggcctaacccattctaacacaattc-aaaaagtttctatacactcaacggtaa 36692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 169611 - 169564
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaa 208  Q
    ||||| |||||||||||||||||||||| ||||||||||| ||||||||    
T  169611 tgggcctaacccattctaacataattct-aaaagtttctacacactcaa 169564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 9360 - 9143
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaa-tgaaatgaatgaatgaat 98  Q
    |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  9360 tcttcaagtttccccctttctctaacccttgttcttcctttcactcactttctctctctacgtctctctaactttgtgaaaatggaatgaatgaatgaat 9261  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattcta-aaaagttt 196  Q
    | |||||||||||| |||||||||| |  | | ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  9260 tcctctccaagttttaggtttaggtgtattcccactcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaaagttt 9161  T
Q  197 ctatacactcaacagtaa 214  Q
    |||||||| |||| ||||    
T  9160 ctatacacgcaacggtaa 9143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 5632 - 5832
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||||||||||||    
T  5632 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctcta----------actttgtgaaatgaaatgaatgaatgaatt 5721  T
Q  100 tctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttct 198  Q
    ||||||||||||| |||| ||||||||||  | ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5722 tctctccaagttttaggtctaggtatgctctatctcaattgggctcaaatctagaccctaatgggcttaacccattctaacataattctaaaaagtttct 5821  T
Q  199 atacactcaac 209  Q
    |||||||||||    
T  5822 atacactcaac 5832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 62 - 214
Target Start/End: Complemental strand, 164780 - 164629
Alignment:
Q  62 tctctctaactttgtgaaatgaaatgaatgaatgaatttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtg 161  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| || | | ||||||||||||||| |||||||||||| ||    
T  164780 tctctctaactt-gtgaaatgaaatgaatgaaggaatttctctccaagtttaggtttaggtgtgttcccactcaattgggctcaattctagaccctaatg 164682  T
Q  162 ggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  164681 ggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 164629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 45422 - 45640
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaat 98  Q
    |||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||| || | |||||| |||||||||||| | |||||||||||    
T  45422 tcttcaagtttccccctttctctaacccttgttcttcctttcttccactttctctctctacctcgcactaactctgtgaaatgaaaaggaatgaatgaat 45521  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    |||||||||||||| ||| |||  |||||| || |||||||||||||| ||||| |||||||||| ||||||||||||||||| |||||||||| |||||    
T  45522 ttctctccaagttttaggcttatatatgctccatctcaattgggctcaattctaaaccctagtggacttaacccattctaacacaattctaaaatgtttc 45621  T
Q  198 tatacactcaacagtaaat 216  Q
    |||||||| ||| ||||||    
T  45622 tatacacttaacggtaaat 45640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 54808 - 55026
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatg-aatgaatgaat 98  Q
    |||||||||||||| ||||  |||||||||||||||||||||  ||||||||||||||||| ||||||||||||||| |||||||| | |||| ||||||    
T  54808 tcttcaagtttcccactttctctaacccttgttcttcctttcttccactttctctctctacctctctctaactttgtaaaatgaaaaggaatggatgaat 54907  T
Q  99 ttctctccaagttt-aggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttc 197  Q
    ||||||| |||||| |||||||  |||||| || |||||||||||||| ||||| |||||||||| |||||||||||||||||||| ||||||| |||||    
T  54908 ttctctctaagttttaggtttatatatgctccatctcaattgggctcaattctaaaccctagtggacttaacccattctaacataactctaaaatgtttc 55007  T
Q  198 tatacactcaacagtaaat 216  Q
    |||||||| ||| ||||||    
T  55008 tatacacttaacggtaaat 55026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 3586 - 3762
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaat 98  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  3586 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaaaggaatgaatgaat 3685  T
Q  99 ttctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccatt 174  Q
    ||||||||||| ||||||||| | ||| |||   |||||||||||||| ||||||||||||||||| ||||||||||    
T  3686 ttctctccaagttttaggtttggatatactatctctcaattgggctcaattctagaccctagtgggtttaacccatt 3762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 42048 - 42170
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaatgaatgaatgaatt 99  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  42048 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtaaaatgaaatgaatgaatgaatt 42147  T
Q  100 tctctccaagtttaggtttaggt 122  Q
    |||||||||||||||||||||||    
T  42148 tctctccaagtttaggtttaggt 42170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 43464 - 43542
Alignment:
Q  131 actcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43464 actcaattgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttccatacactcaac 43542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 5426 - 5250
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaat 98  Q
    |||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||| ||| ||||||||||||    
T  5426 tcttcaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctccaactttgtgaaatgaaaaggaatgaatgaat 5327  T
Q  99 ttctctccaag-tttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccatt 174  Q
    ||||||||||| ||||||||| | ||| |||   |||||||||||||| ||||||||| ||||||| ||||||||||    
T  5326 ttctctccaagttttaggtttggatatactatctctcaattgggctcaattctagaccttagtgggtttaacccatt 5250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 34257 - 34128
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaat 98  Q
    |||| ||||||||||||||  ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  34257 tctttaagtttccccctttctctaacccttgttcttcctttctcccactttctctctctacctctctctaactttgtgaaatgaaaaggaatgaatgaat 34158  T
Q  99 ttctctccaag-tttaggtttaggtatgct 127  Q
    ||||||||||| ||||||||||| ||||||    
T  34157 ttctctccaagttttaggtttagatatgct 34128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 34123 - 34083
Alignment:
Q  176 taacataattctaaaaagtttctatacactcaacagtaaat 216  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  34123 taacataattctaaaaaatttctatacactcaacggtaaat 34083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 4294 - 4090
Alignment:
Q  1 tcttcaagtttccccctttg-ctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaa-tgaaat--gaatgaatga 96  Q
    ||||||||||| |||||||  ||||||||||||||||||||| | |||||||||||||||| |||||||||||||| |||| |||||   ||||||||||    
T  4294 tcttcaagtttacccctttctctaacccttgttcttcctttctctcactttctctctctacctctctctaactttgggaaaatgaaaaaggaatgaatga 4195  T
Q  97 atttctctccaagtttaggtttaggtatgctacaactcaattgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagttt 196  Q
    |||||||||  | |||             || | | ||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  4194 atttctctc--actttct-----------ctcccaatcaattgggctcaattctagaccctaatgggcttaacccattctaacacaattctaaaaagttt 4108  T
Q  197 ctatacactcaacagtaa 214  Q
    ||||||||||||| ||||    
T  4107 ctatacactcaacggtaa 4090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 20254714 - 20254813
Alignment:
Q  1 tcttcaagtttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaatt 99  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  20254714 tcttcaagtttccccctttgctaacccttgttcttcctttcactcac-ttctctctctacatctctctaacttagtgaaatgaaaaggaatgaatgaatt 20254812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 22228340 - 22228416
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||  ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22228340 tgggctcaattctagattctaatgggcctaacccatcctaacataattctaaaaagtttctatacactcaacggtaa 22228416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 22233037 - 22233113
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||  ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  22233037 tgggctcaattctagattctaatgggcctaacccatcctaacataattctaaaaagtttctatacactcaacggtaa 22233113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 214
Target Start/End: Complemental strand, 15861102 - 15861054
Alignment:
Q  166 taacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  15861102 taacccattctaacataattctaaaaagtttttatacactcaacggtaa 15861054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 17005195 - 17005249
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  17005195 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 17005249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 21860449 - 21860497
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  21860449 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 21860497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 38054811 - 38054759
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  38054811 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 38054759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 20254895 - 20254927
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  20254895 aattctaaaaagtttctatacactcaacggtaa 20254927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 44034788 - 44034740
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||| ||||||| ||||||||    
T  44034788 ctaacccttgttcttctcttctcccactttctttctctacctctctcta 44034740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 1299 - 1223
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||    
T  1299 tgggctcaattctagaccctaatgggcttaacccattctaacataattctaaaaagtttatattcactcaacggtaa 1223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 22764 - 22840
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  22764 tgggctcaattctagatcctaatgggcttaacccattctaacataattctaaaaagattctatacactcaacggtaa 22840  T

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Target: scaffold0026 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 108145 - 108221
Alignment:
Q  9 tttccccctttgctaacccttgttcttcctttcacccactttctctctctacatctctctaactttgtgaaatgaaa 85  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||| ||| |||||||||||||||| |||||||    
T  108145 tttccccctttgctaacccttgttcttcctttcactcacttactctctttacttctctctaactttgtggaatgaaa 108221  T

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Target: scaffold0026; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 108271 - 108347
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||    
T  108271 tgggctcaattctagaccctaatgggcttaacccattctaacataattataaaaagtttctctacacttaactgtaa 108347  T

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Target: scaffold0022 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 4936 - 4860
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  4936 tgggctcaattctagattctaatgggcctaacccattctaacataattctaaaaagtttctatacactcaacagtaa 4860  T

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Target: scaffold0369 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 4254 - 4330
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||  ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  4254 tgggctcaattctagattctaatgggcctaacccattctaacataattctaaaaagtttctatacactcaacggtaa 4330  T

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Target: scaffold0175 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 688 - 612
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||||| ||||    
T  688 tgggctcaattctagaccctaatgggcttaacccattttaacataattctagaaagtctctatacactcaactgtaa 612  T

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Target: scaffold0175; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 209
Target Start/End: Original strand, 17584 - 17633
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  17584 tgggcttaactcattctaacataattccaaaaagtttctatacactcaac 17633  T

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Target: scaffold0175; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 15308 - 15356
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    |||||| |||||||||  ||| |||||||||||||||||| ||||||||    
T  15308 ctaacctttgttcttctcttctcccactttctctctctacctctctcta 15356  T

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Target: scaffold0682 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 8251 - 8192
Alignment:
Q  157 tagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaaat 216  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  8251 tagtgggcttaacccattctaaaataattctaaaaagtttctatacactcaacggtaaat 8192  T

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Target: scaffold0139 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 13761 - 13707
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  13761 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacggtaa 13707  T

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Target: scaffold0139; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 20816 - 20762
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  20816 tgggcctaacctcttctaacataattctaaaaagtttctatacactcaacggtaa 20762  T

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Target: scaffold1615 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 43 - 119
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  43 tgggctcaattctaaattctaatgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 119  T

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Target: scaffold0529 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 3492 - 3568
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  3492 tgggctcaattctaaattctaatgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 3568  T

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Target: scaffold0092 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 10473 - 10397
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  10473 tgggctcaattctaaattctaatgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 10397  T

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Target: scaffold1500 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 1216 - 1162
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  1216 tgggcctaacccattctaacataactctaaaaagtttctatacactcaacggtaa 1162  T

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Target: scaffold0191 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 7158 - 7105
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7158 tgggcctaacccattctaacataattct-aaaagtttctatacactcaacggtaa 7105  T

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Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 131129 - 131182
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  131129 tgggcctaacccattctaacataattct-aaaagtttctatacactcaacggtaa 131182  T

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Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 31378 - 31325
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  31378 tgggcctaacccattctaacataattct-aaaagtttctatacactcaacggtaa 31325  T

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Target: scaffold0367 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 16986 - 16938
Alignment:
Q  166 taacccattctaacataattctaaaaagtttctatacactcaacagtaaa 215  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  16986 taacccattctaacataattct-aaaagtttctatacactcaacggtaaa 16938  T

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Target: scaffold0447 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 59 - 135
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||||| |||||||||| ||||| |||||| ||||    
T  59 tgggctcaattctaaattctaatgggcctaacccattctaacataattataaaaagtttatatacgctcaacggtaa 135  T

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Target: scaffold0383 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 2923 - 2999
Alignment:
Q  138 tgggctcagttctagaccctagtgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||| ||||| |  ||| ||||| |||||||||||||||||||| |||||||||| ||||| |||||| ||||    
T  2923 tgggctcaattctaaattctaatgggcctaacccattctaacataattataaaaagtttatatacgctcaacggtaa 2999  T

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Target: scaffold0107 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 31866 - 31920
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  31866 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 31920  T

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Target: scaffold0076 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 39660 - 39714
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| |||| |||||||||||||||| ||||||||||||| |||||||| ||||    
T  39660 tgggcctaactcattctaacataattccaaaaagtttctatccactcaacggtaa 39714  T

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Target: scaffold0706 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 6359 - 6311
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||| |||||||||| |||| |||||||||||||||||| ||||||||    
T  6359 ctaactcttgttcttcttttctcccactttctctctctacctctctcta 6311  T

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Target: scaffold0597 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 799 - 751
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  799 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 751  T

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Target: scaffold0516 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 11943 - 11891
Alignment:
Q  49 ttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  11943 ttctctctctacctctctctaacttagtgaaatgaaaaggaatgaatgaattt 11891  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 9803 - 9755
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  9803 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 9755  T

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Target: scaffold0310 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 6221 - 6173
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  6221 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 6173  T

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Target: scaffold0215 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 9164 - 9112
Alignment:
Q  49 ttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  9164 ttctctctctacttctctctaacttagtgaaatgaaaaggaatgaatgaattt 9112  T

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Target: scaffold0215; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Complemental strand, 16062 - 16010
Alignment:
Q  49 ttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  16062 ttctctctctacttctctctaacttagtgaaatgaaaaggaatgaatgaattt 16010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 42789 - 42837
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  42789 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 42837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 15284 - 15236
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  15284 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 15236  T

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Target: scaffold0025 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 147022 - 147070
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  147022 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 147070  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 193313 - 193265
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||||    
T  193313 ctaacccttgttcttctcttctcccactttctctctctacctctctcta 193265  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 7649 - 7701
Alignment:
Q  49 ttctctctctacatctctctaactttgtgaaatg-aaatgaatgaatgaattt 100  Q
    |||||||||||| |||||||||||| |||||||| ||| ||||||||||||||    
T  7649 ttctctctctacctctctctaacttagtgaaatgaaaaggaatgaatgaattt 7701  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 7783 - 7815
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  7783 aattctaaaaagtttctatacactcaacggtaa 7815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 4 - 56
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  4 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 56  T

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Target: scaffold0247 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 23307 - 23255
Alignment:
Q  160 tgggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    ||||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  23307 tgggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 23255  T

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Target: scaffold1164 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1164
Description:

Target: scaffold1164; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Original strand, 1815 - 1861
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctc 67  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||||    
T  1815 ctaacccttgttcttctcttctcccactttctctctctacctctctc 1861  T

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Target: scaffold0213 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 214
Target Start/End: Original strand, 29746 - 29797
Alignment:
Q  161 gggcttaacccattctaacataattctaaaaagtttctatacactcaacagtaa 214  Q
    |||| ||||||||||||||| |||||  ||||||||||||||||||||| ||||    
T  29746 gggcctaacccattctaacacaattc--aaaagtttctatacactcaacggtaa 29797  T

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Target: scaffold0876 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 208 - 253
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctct 66  Q
    ||||||||||||||||  ||| |||||||||||||||||| |||||    
T  208 ctaacccttgttcttctcttctcccactttctctctctacctctct 253  T

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Target: scaffold0892 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 3982 - 4014
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  3982 aattctaaaaagtttctatacactcaacggtaa 4014  T

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Target: scaffold0686 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 5694 - 5646
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||| ||||||||||||| ||||||||    
T  5694 ctaacccttgttcttctcttctcccattttctctctctacctctctcta 5646  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 1214 - 1162
Alignment:
Q  157 tagtgggcttaacccattctaacataattctaaaaagtttctatacactcaac 209  Q
    |||||| |||||||||||| |||  |||||||||| ||||||| |||||||||    
T  1214 tagtggacttaacccattccaactcaattctaaaatgtttctacacactcaac 1162  T

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Target: scaffold0234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 17225 - 17177
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| ||||||||| |||||||| ||||||||    
T  17225 ctaacccttgttcttctcttctcccactttcgctctctacctctctcta 17177  T

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Target: scaffold0218 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 5002 - 4954
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||| ||||||  ||| |||||||||||||||||| ||||||||    
T  5002 ctaaccctttttcttctcttctcccactttctctctctacctctctcta 4954  T

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Target: scaffold0162 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 26261 - 26213
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||| ||||||  ||| |||||||||||||||||| ||||||||    
T  26261 ctaaccctttttcttctcttctcccactttctctctctacctctctcta 26213  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 42148 - 42196
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||| ||||| ||||||||    
T  42148 ctaacccttgttcttctcttctcccactttctctttctacctctctcta 42196  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 12334 - 12286
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||| ||||||| ||||||||    
T  12334 ctaacccttgttcttctcttctcccactttctttctctacttctctcta 12286  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 65
Target Start/End: Original strand, 80302 - 80346
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctc 65  Q
    ||||||||||||||||  ||| |||||||||||||||||| ||||    
T  80302 ctaacccttgttcttctcttctcccactttctctctctacctctc 80346  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 108582 - 108630
Alignment:
Q  157 tagtgggcttaacccattctaacataattctaaaaagtttctatacact 205  Q
    |||||||||||||||| || | || |||||||||||||||||| |||||    
T  108582 tagtgggcttaacccactcaatcacaattctaaaaagtttctacacact 108630  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 51026 - 50978
Alignment:
Q  21 ctaacccttgttcttcctttcacccactttctctctctacatctctcta 69  Q
    ||||||||||||||||  ||| |||||||||||||||||| | ||||||    
T  51026 ctaacccttgttcttctcttctcccactttctctctctacctttctcta 50978  T

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Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 44135 - 44167
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  44135 aattctaaaaagtttctatacactcaacggtaa 44167  T

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Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 54438 - 54470
Alignment:
Q  182 aattctaaaaagtttctatacactcaacagtaa 214  Q
    |||||||||||||||||||||||||||| ||||    
T  54438 aattctaaaaagtttctatacactcaacggtaa 54470  T

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