View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15900_low_7 (Length: 325)
Name: NF15900_low_7
Description: NF15900
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15900_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 13 - 300
Target Start/End: Original strand, 4569120 - 4569406
Alignment:
| Q |
13 |
aagaaaattgggtgatgtggcgttaaggcttgacattagcaaaatgtacgacaaaattgatcgaaattacctttaaaggattatgttcaaaataactttt |
112 |
Q |
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| T |
4569120 |
aagaaaattgggtgatgtggcgttaaggcttgacattagcaaaacgtacgacaaaattgatcgaaattacctttaaaggattatgttcaaaataactttc |
4569219 |
T |
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| Q |
113 |
tcctattgatgcgtcaaattgatcataatgtgtgttgatattattgatttttctgttctttttaatggtaatattgttgatcctatcattccaagttgag |
212 |
Q |
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|||||||||||| |||||| |||||| | |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
4569220 |
tcctattgatgcatcaaatggatcatgacgtgtgttgatattattgattactctgttctttttaatggtaatattgttggtcctatcattccaagttgag |
4569319 |
T |
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| Q |
213 |
gcttgggacaaggcgagattctattcctccttatttgtttatcatttgtgcataagac-ttatccgctcgtacataaaaagtagaggct |
300 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||| || || |||||||||||| |
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| T |
4569320 |
gcttgggacaag--gagattctattcctccttatttgtttatcatttgtgcataaggctttatccgctcttatatggaaagtagaggct |
4569406 |
T |
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