View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15901_low_2 (Length: 310)
Name: NF15901_low_2
Description: NF15901
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15901_low_2 |
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Alignment Details
Target: chr5 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 17975732 - 17976028
Alignment:
| Q |
1 |
tcttttgaatcaagatcctacataatatttttacaacaggaattgcttaaaagtttcttaaccatttcttaggaaatatcactattggagcaagttgata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17975732 |
tcttttgaatcaagatcctacataatatttttacaacaggaattgcttaaaagtttcttaaccatttcttaggaaatatcactattggagcaagttgata |
17975831 |
T |
|
| Q |
101 |
ggcacatataaaaatcattgtcatataaacaacttattctaaactttaaaatcaatctgcttatataaagtatactgtacaaactgagacaacttatcgg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17975832 |
ggcacatataaaaatcattgtcatataaacaacttattctaaactttaaaatcaatctgcttatataaagtatactgtacaaactgagacaacttatcgg |
17975931 |
T |
|
| Q |
201 |
acctatttcaccttcttaaataactgcatcataagtataatgtttctaaagtcattgaagctaatttaattgcacaataatgatgattaagaataat |
297 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
17975932 |
acctatttcaccttcttaaataactgcatcataagtataatgtttctaaagtcattgaagctaatttaattgcacaataatgatgattaagaataat |
17976028 |
T |
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