View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15902_low_5 (Length: 234)

Name: NF15902_low_5
Description: NF15902
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15902_low_5
NF15902_low_5
[»] chr3 (58 HSPs)
chr3 (1-229)||(46860282-46860510)
chr3 (5-221)||(6095735-6095948)
chr3 (5-217)||(34491036-34491244)
chr3 (5-225)||(36018666-36018884)
chr3 (5-221)||(41819659-41819871)
chr3 (5-225)||(54593520-54593736)
chr3 (5-221)||(4569770-4569984)
chr3 (7-221)||(49199608-49199820)
chr3 (5-217)||(30235948-30236157)
chr3 (7-221)||(47304071-47304281)
chr3 (30-221)||(40913158-40913350)
chr3 (5-219)||(5434013-5434224)
chr3 (5-221)||(43401938-43402139)
chr3 (37-217)||(55302133-55302310)
chr3 (5-217)||(43403881-43404078)
chr3 (8-127)||(31340340-31340457)
chr3 (85-217)||(1683311-1683440)
chr3 (1-182)||(26323206-26323385)
chr3 (5-95)||(29196523-29196612)
chr3 (5-95)||(44700614-44700703)
chr3 (5-95)||(5236592-5236680)
chr3 (5-95)||(40734442-40734530)
chr3 (5-84)||(40735337-40735415)
chr3 (6-96)||(9666604-9666693)
chr3 (1-95)||(22835134-22835226)
chr3 (5-95)||(31314389-31314477)
chr3 (5-95)||(44331489-44331577)
chr3 (1-192)||(35138838-35139026)
chr3 (1-84)||(53921635-53921717)
chr3 (5-95)||(19684025-19684113)
chr3 (1-95)||(29682303-29682395)
chr3 (1-95)||(39153493-39153585)
chr3 (4-95)||(760791-760880)
chr3 (2-93)||(32891049-32891138)
chr3 (1-81)||(26386613-26386692)
chr3 (5-84)||(51398768-51398846)
chr3 (1-95)||(9581227-9581318)
chr3 (1-95)||(23392041-23392133)
chr3 (87-196)||(34795713-34795819)
chr3 (5-95)||(37408403-37408490)
chr3 (5-95)||(45095109-45095195)
chr3 (33-94)||(46173311-46173370)
chr3 (81-196)||(20937501-20937613)
chr3 (5-95)||(5258280-5258368)
chr3 (5-84)||(7762220-7762297)
chr3 (5-84)||(16498984-16499062)
chr3 (57-166)||(39127421-39127528)
chr3 (2-84)||(23410462-23410543)
chr3 (6-95)||(29810812-29810899)
chr3 (5-95)||(5260459-5260547)
chr3 (6-95)||(23198076-23198161)
chr3 (6-95)||(23200275-23200360)
chr3 (5-84)||(9636262-9636340)
chr3 (5-84)||(29813017-29813095)
chr3 (6-95)||(2075194-2075281)
chr3 (168-225)||(28074431-28074488)
chr3 (5-84)||(7764422-7764496)
chr3 (145-220)||(36796231-36796307)
[»] chr4 (71 HSPs)
chr4 (1-222)||(379197-379416)
chr4 (5-221)||(50673982-50674195)
chr4 (5-221)||(54882839-54883052)
chr4 (5-221)||(41964234-41964447)
chr4 (5-217)||(35662265-35662473)
chr4 (5-225)||(46703316-46703532)
chr4 (1-217)||(12073215-12073428)
chr4 (5-221)||(8665226-8665440)
chr4 (7-221)||(55085503-55085714)
chr4 (7-221)||(6655775-6655986)
chr4 (5-221)||(8647957-8648171)
chr4 (7-218)||(12119361-12119568)
chr4 (5-177)||(2209576-2209745)
chr4 (7-221)||(50262839-50263047)
chr4 (37-221)||(33989681-33989862)
chr4 (82-221)||(26364084-26364222)
chr4 (6-129)||(40632355-40632476)
chr4 (5-184)||(27417101-27417273)
chr4 (5-120)||(41639345-41639458)
chr4 (145-221)||(40630803-40630879)
chr4 (81-187)||(41961264-41961368)
chr4 (5-84)||(48893778-48893856)
chr4 (1-95)||(5871764-5871856)
chr4 (1-95)||(13009563-13009655)
chr4 (5-101)||(21688186-21688281)
chr4 (5-95)||(52095498-52095586)
chr4 (1-95)||(52467486-52467579)
chr4 (4-93)||(31474096-31474183)
chr4 (5-97)||(36463525-36463615)
chr4 (85-217)||(33089722-33089841)
chr4 (5-95)||(5429623-5429711)
chr4 (5-95)||(26175772-26175860)
chr4 (5-95)||(37229859-37229947)
chr4 (5-95)||(54200042-54200130)
chr4 (7-84)||(36994478-36994554)
chr4 (22-213)||(26699598-26699786)
chr4 (1-95)||(24969055-24969148)
chr4 (5-95)||(47038546-47038633)
chr4 (5-95)||(52082793-52082881)
chr4 (93-205)||(3785926-3786034)
chr4 (5-94)||(12745572-12745659)
chr4 (7-84)||(51337018-51337094)
chr4 (5-95)||(41639207-41639295)
chr4 (5-95)||(9927594-9927681)
chr4 (5-95)||(12739686-12739774)
chr4 (5-95)||(12747892-12747980)
chr4 (1-195)||(32091324-32091514)
chr4 (5-95)||(34570550-34570638)
chr4 (5-95)||(56178773-56178860)
chr4 (82-229)||(22882964-22883109)
chr4 (82-229)||(22934628-22934773)
chr4 (6-95)||(29254438-29254525)
chr4 (2-95)||(45687316-45687407)
chr4 (111-217)||(34112435-34112539)
chr4 (20-95)||(48142986-48143059)
chr4 (6-78)||(3913408-3913479)
chr4 (7-95)||(4587902-4587988)
chr4 (20-95)||(6542332-6542405)
chr4 (35-196)||(35369607-35369763)
chr4 (5-55)||(26364218-26364268)
chr4 (5-95)||(37740570-37740657)
chr4 (5-94)||(5207979-5208066)
chr4 (5-84)||(29999943-30000019)
chr4 (147-221)||(46569821-46569895)
chr4 (85-205)||(35370553-35370669)
chr4 (17-95)||(29056301-29056378)
chr4 (26-93)||(5370244-5370308)
chr4 (5-48)||(46147527-46147570)
chr4 (82-123)||(25723433-25723474)
chr4 (5-97)||(48142515-48142605)
chr4 (57-105)||(52065530-52065578)
[»] chr6 (31 HSPs)
chr6 (5-217)||(21593489-21593696)
chr6 (5-221)||(17762808-17763022)
chr6 (1-221)||(5043446-5043663)
chr6 (1-221)||(2973071-2973288)
chr6 (5-221)||(3808845-3809057)
chr6 (26-221)||(603237-603429)
chr6 (6-221)||(26830260-26830473)
chr6 (5-218)||(22424963-22425171)
chr6 (5-95)||(9183167-9183255)
chr6 (128-221)||(17757903-17757997)
chr6 (5-95)||(28137544-28137632)
chr6 (6-151)||(25073457-25073599)
chr6 (59-202)||(5740978-5741120)
chr6 (5-95)||(3039039-3039127)
chr6 (5-97)||(4045364-4045454)
chr6 (5-95)||(2171667-2171754)
chr6 (5-95)||(5406336-5406422)
chr6 (5-95)||(5410661-5410747)
chr6 (5-53)||(21588915-21588963)
chr6 (7-95)||(33211323-33211409)
chr6 (5-67)||(17757994-17758055)
chr6 (5-84)||(16452465-16452543)
chr6 (20-95)||(33160504-33160577)
chr6 (5-95)||(5413530-5413616)
chr6 (71-196)||(11660452-11660574)
chr6 (5-84)||(30834672-30834750)
chr6 (5-84)||(31404811-31404887)
chr6 (179-225)||(26800585-26800631)
chr6 (21-95)||(26954437-26954509)
chr6 (2-33)||(16569037-16569068)
chr6 (148-229)||(25072996-25073076)
[»] chr5 (41 HSPs)
chr5 (5-221)||(40147080-40147293)
chr5 (5-221)||(213288-213497)
chr5 (5-217)||(5057870-5058079)
chr5 (5-221)||(38746824-38747037)
chr5 (5-221)||(27015351-27015563)
chr5 (5-219)||(27637749-27637963)
chr5 (7-221)||(28278135-28278346)
chr5 (20-201)||(16641091-16641269)
chr5 (59-229)||(4160445-4160611)
chr5 (5-94)||(42426371-42426458)
chr5 (81-222)||(14689622-14689759)
chr5 (1-84)||(8566078-8566160)
chr5 (5-95)||(533713-533801)
chr5 (5-95)||(28750791-28750879)
chr5 (3-95)||(19806328-19806417)
chr5 (7-84)||(42428568-42428644)
chr5 (5-84)||(13488157-13488235)
chr5 (1-95)||(5887548-5887640)
chr5 (5-95)||(39468685-39468773)
chr5 (81-221)||(316585-316720)
chr5 (7-84)||(32636778-32636854)
chr5 (1-188)||(35616023-35616205)
chr5 (91-229)||(21205873-21206009)
chr5 (1-84)||(33831634-33831716)
chr5 (1-95)||(3075790-3075882)
chr5 (5-95)||(31182917-31183004)
chr5 (131-193)||(33906288-33906350)
chr5 (7-94)||(537970-538055)
chr5 (5-95)||(25412706-25412792)
chr5 (5-95)||(13343005-13343093)
chr5 (5-84)||(30683057-30683134)
chr5 (5-95)||(13239696-13239783)
chr5 (5-95)||(30182533-30182620)
chr5 (26-94)||(42926838-42926904)
chr5 (68-164)||(8019464-8019557)
chr5 (1-84)||(16452035-16452116)
chr5 (20-95)||(36074196-36074268)
chr5 (9-84)||(42310075-42310149)
chr5 (18-94)||(9049490-9049565)
chr5 (26-95)||(37439078-37439144)
chr5 (5-89)||(13695828-13695910)
[»] chr1 (63 HSPs)
chr1 (5-217)||(11348521-11348730)
chr1 (5-221)||(37033209-37033422)
chr1 (5-217)||(34603399-34603608)
chr1 (5-221)||(7482367-7482579)
chr1 (5-221)||(193430-193643)
chr1 (5-221)||(37879047-37879260)
chr1 (5-217)||(13547225-13547434)
chr1 (5-217)||(13549136-13549345)
chr1 (5-221)||(37168116-37168329)
chr1 (5-221)||(42298111-42298324)
chr1 (5-221)||(47114990-47115203)
chr1 (5-219)||(29136068-29136279)
chr1 (5-221)||(47255476-47255688)
chr1 (5-221)||(19752504-19752718)
chr1 (5-221)||(19754310-19754527)
chr1 (5-221)||(31925843-31926055)
chr1 (41-221)||(28242207-28242385)
chr1 (88-217)||(34602557-34602684)
chr1 (37-217)||(6808270-6808446)
chr1 (39-221)||(41135640-41135818)
chr1 (1-84)||(4552769-4552851)
chr1 (5-94)||(1833467-1833554)
chr1 (5-95)||(197044-197132)
chr1 (5-95)||(3847257-3847345)
chr1 (81-221)||(22079142-22079278)
chr1 (5-95)||(44455104-44455192)
chr1 (5-79)||(49918309-49918382)
chr1 (7-95)||(10925167-10925253)
chr1 (1-84)||(8550919-8551001)
chr1 (5-84)||(31659192-31659270)
chr1 (5-84)||(37503690-37503768)
chr1 (1-95)||(41360859-41360950)
chr1 (71-203)||(25651922-25652053)
chr1 (5-95)||(28265690-28265778)
chr1 (5-95)||(50167311-50167399)
chr1 (5-95)||(50169346-50169434)
chr1 (4-93)||(13138110-13138196)
chr1 (7-95)||(28223559-28223645)
chr1 (5-84)||(3156820-3156897)
chr1 (1-84)||(46064872-46064954)
chr1 (5-95)||(834303-834391)
chr1 (2-84)||(45644488-45644569)
chr1 (1-97)||(15820249-15820343)
chr1 (5-84)||(28220362-28220440)
chr1 (5-95)||(928113-928202)
chr1 (5-95)||(23555401-23555489)
chr1 (6-84)||(37560006-37560083)
chr1 (20-96)||(44650314-44650389)
chr1 (5-84)||(13659472-13659550)
chr1 (5-95)||(20762616-20762704)
chr1 (5-95)||(3189275-3189362)
chr1 (5-95)||(3198092-3198179)
chr1 (5-95)||(3206931-3207018)
chr1 (1-94)||(40122330-40122421)
chr1 (85-166)||(3331428-3331505)
chr1 (6-75)||(16455585-16455653)
chr1 (109-192)||(12318720-12318801)
chr1 (5-95)||(30476582-30476672)
chr1 (82-155)||(10157501-10157571)
chr1 (131-204)||(9109660-9109733)
chr1 (20-96)||(44646935-44647010)
chr1 (128-162)||(6068471-6068505)
chr1 (181-217)||(4535783-4535819)
[»] chr7 (58 HSPs)
chr7 (5-225)||(34310852-34311069)
chr7 (5-225)||(3258811-3259027)
chr7 (5-221)||(2361108-2361320)
chr7 (5-221)||(29608555-29608769)
chr7 (7-219)||(4512528-4512737)
chr7 (5-221)||(4508842-4509055)
chr7 (5-217)||(6431794-6432003)
chr7 (5-217)||(2390105-2390314)
chr7 (5-225)||(22269788-22270005)
chr7 (7-221)||(4510686-4510897)
chr7 (5-213)||(48599470-48599675)
chr7 (30-217)||(6360073-6360257)
chr7 (5-221)||(8359453-8359667)
chr7 (40-229)||(22328568-22328755)
chr7 (5-95)||(47676272-47676360)
chr7 (6-95)||(36146545-36146633)
chr7 (5-84)||(47674079-47674157)
chr7 (5-83)||(30024868-30024945)
chr7 (5-95)||(31733105-31733193)
chr7 (2-95)||(24526030-24526121)
chr7 (5-95)||(4538676-4538764)
chr7 (5-95)||(4586105-4586193)
chr7 (5-95)||(27347761-27347849)
chr7 (5-95)||(48491523-48491611)
chr7 (5-84)||(14069969-14070047)
chr7 (5-84)||(14379997-14380075)
chr7 (5-95)||(1113601-1113689)
chr7 (5-95)||(8153286-8153374)
chr7 (5-95)||(12097995-12098083)
chr7 (6-84)||(31105530-31105607)
chr7 (5-95)||(38671358-38671446)
chr7 (5-95)||(43864188-43864276)
chr7 (5-95)||(48489375-48489463)
chr7 (5-94)||(26417261-26417348)
chr7 (1-81)||(31518752-31518831)
chr7 (5-95)||(35853859-35853946)
chr7 (5-95)||(41317570-41317658)
chr7 (1-95)||(41649142-41649234)
chr7 (6-95)||(2761439-2761526)
chr7 (7-95)||(48408747-48408832)
chr7 (2-196)||(1360286-1360478)
chr7 (5-95)||(4178719-4178806)
chr7 (5-95)||(18126588-18126676)
chr7 (5-95)||(29990999-29991085)
chr7 (5-94)||(496119-496206)
chr7 (20-97)||(23554982-23555056)
chr7 (20-95)||(24514912-24514984)
chr7 (5-95)||(4253666-4253754)
chr7 (136-200)||(5116475-5116539)
chr7 (2-95)||(5514143-5514234)
chr7 (141-218)||(43363683-43363759)
chr7 (7-79)||(23343934-23344004)
chr7 (20-95)||(19502122-19502194)
chr7 (4-89)||(23565197-23565280)
chr7 (5-94)||(25767097-25767180)
chr7 (2-90)||(3904751-3904837)
chr7 (26-95)||(36574672-36574740)
chr7 (1-33)||(25615857-25615889)
[»] chr2 (40 HSPs)
chr2 (5-221)||(1631868-1632081)
chr2 (6-219)||(45726750-45726960)
chr2 (5-221)||(35447020-35447233)
chr2 (7-221)||(42288248-42288459)
chr2 (5-225)||(17450405-17450623)
chr2 (26-217)||(24397881-24398066)
chr2 (1-95)||(11690445-11690537)
chr2 (5-95)||(29867813-29867901)
chr2 (5-95)||(34139907-34139995)
chr2 (1-95)||(42362296-42362388)
chr2 (5-84)||(17057505-17057583)
chr2 (5-84)||(17085488-17085566)
chr2 (5-84)||(36318145-36318223)
chr2 (1-95)||(723876-723968)
chr2 (1-95)||(11151723-11151815)
chr2 (5-95)||(14633962-14634050)
chr2 (17-217)||(33647993-33648191)
chr2 (5-95)||(36773506-36773594)
chr2 (5-95)||(38312184-38312272)
chr2 (5-95)||(39284829-39284917)
chr2 (9-95)||(2334558-2334641)
chr2 (5-95)||(5723392-5723478)
chr2 (5-95)||(13121712-13121800)
chr2 (1-95)||(24885605-24885697)
chr2 (6-95)||(11067249-11067336)
chr2 (5-97)||(33162586-33162676)
chr2 (85-196)||(30218250-30218358)
chr2 (5-95)||(45099699-45099787)
chr2 (5-95)||(36205800-36205887)
chr2 (1-95)||(14202537-14202631)
chr2 (170-217)||(7451123-7451170)
chr2 (20-95)||(7815424-7815498)
chr2 (17-95)||(11049493-11049570)
chr2 (5-95)||(36988212-36988299)
chr2 (91-196)||(43730992-43731093)
chr2 (18-95)||(5700271-5700347)
chr2 (20-95)||(4503284-4503356)
chr2 (6-95)||(12123722-12123809)
chr2 (68-111)||(16676152-16676196)
chr2 (85-125)||(42261694-42261734)
[»] chr8 (51 HSPs)
chr8 (5-221)||(4283343-4283556)
chr8 (1-225)||(40328594-40328815)
chr8 (5-221)||(40221564-40221777)
chr8 (5-221)||(42435127-42435340)
chr8 (5-221)||(11383805-11384017)
chr8 (5-217)||(44353615-44353825)
chr8 (7-195)||(18655246-18655430)
chr8 (2-95)||(30291549-30291641)
chr8 (3-95)||(18141764-18141855)
chr8 (5-95)||(4731602-4731690)
chr8 (5-95)||(43036367-43036455)
chr8 (5-84)||(27811232-27811310)
chr8 (5-95)||(15212730-15212818)
chr8 (93-205)||(40585561-40585669)
chr8 (5-96)||(10930335-10930424)
chr8 (1-95)||(19491831-19491922)
chr8 (1-95)||(1292595-1292687)
chr8 (5-95)||(33352094-33352182)
chr8 (5-93)||(8965828-8965914)
chr8 (5-97)||(40321022-40321112)
chr8 (1-95)||(3303802-3303894)
chr8 (1-95)||(4743336-4743427)
chr8 (1-95)||(6598916-6599008)
chr8 (1-95)||(6674369-6674461)
chr8 (5-95)||(9765693-9765777)
chr8 (1-94)||(41366746-41366837)
chr8 (5-97)||(1345507-1345597)
chr8 (7-97)||(5689213-5689301)
chr8 (1-95)||(41364979-41365071)
chr8 (1-52)||(3772177-3772228)
chr8 (5-95)||(17982597-17982685)
chr8 (5-84)||(34254467-34254543)
chr8 (37-196)||(33655472-33655628)
chr8 (5-95)||(8153705-8153795)
chr8 (10-95)||(18106219-18106302)
chr8 (20-95)||(1746370-1746442)
chr8 (1-84)||(10929753-10929835)
chr8 (5-95)||(30143286-30143372)
chr8 (20-95)||(31218201-31218273)
chr8 (20-95)||(44303798-44303870)
chr8 (7-84)||(19945498-19945574)
chr8 (1-84)||(4162454-4162533)
chr8 (85-166)||(10020321-10020398)
chr8 (20-95)||(12702790-12702862)
chr8 (5-84)||(34256643-34256719)
chr8 (20-83)||(42498149-42498210)
chr8 (151-217)||(9633816-9633882)
chr8 (180-225)||(2999828-2999873)
chr8 (136-221)||(3846083-3846167)
chr8 (69-196)||(10101351-10101475)
chr8 (81-126)||(10240070-10240113)
[»] scaffold0466 (1 HSPs)
scaffold0466 (7-217)||(7151-7357)
[»] scaffold0014 (1 HSPs)
scaffold0014 (5-221)||(80419-80632)
[»] scaffold0176 (1 HSPs)
scaffold0176 (5-217)||(18139-18346)
[»] scaffold0286 (1 HSPs)
scaffold0286 (5-221)||(11377-11589)
[»] scaffold0197 (1 HSPs)
scaffold0197 (65-204)||(1591-1737)
[»] scaffold0016 (1 HSPs)
scaffold0016 (7-95)||(114547-114632)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-84)||(20547-20629)
[»] scaffold0006 (1 HSPs)
scaffold0006 (5-84)||(149233-149311)
[»] scaffold1519 (1 HSPs)
scaffold1519 (5-95)||(861-948)
[»] scaffold0053 (1 HSPs)
scaffold0053 (59-110)||(24981-25032)
[»] scaffold0002 (2 HSPs)
scaffold0002 (5-66)||(434504-434565)
scaffold0002 (85-125)||(490529-490569)
[»] scaffold0491 (1 HSPs)
scaffold0491 (5-95)||(11298-11385)


Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 46860510 - 46860282
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctag 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46860510 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttctcaactctag 46860411  T
Q  101 aatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  46860410 aatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgac 46860311  T
Q  201 tctccactcatgtgtttcccatccctatg 229  Q
    |||||||||||||||||||||||||||||    
T  46860310 tctccactcatgtgtttcccatccctatg 46860282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 6095735 - 6095948
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6095735 cctaatttctactcattttcccaatctcaccaatgaataagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 6095832  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||||||||| |  |||  ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6095833 taacccccaaaagagaaccaacctt--tagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 6095930  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  6095931 ccactcatgtgtttccca 6095948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 34491244 - 34491036
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||  |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  34491244 cctaatttctacccattttcccaatctcaccaatgaataacacactca--gaattt-cactctcccaaggtgtttacaattgtttcccaactctagaatc 34491148  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  34491147 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 34491050  T
Q  204 ccactcatgtgttt 217  Q
    ||||||||||||||    
T  34491049 ccactcatgtgttt 34491036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 36018884 - 36018666
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||| |||||||||| |||| ||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36018884 cctaatttcaacccattttcccaatttcaccaatgaacaagtcactcgtt-aattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 36018786  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||| ||||||||||||||||| ||   ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36018785 taaaccccaaaagagaaccaatcca--tagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 36018688  T
Q  204 ccactcatgtgtttcccatccc 225  Q
    ||| ||||||||||||||||||    
T  36018687 ccattcatgtgtttcccatccc 36018666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 41819659 - 41819871
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41819659 cctaatttctacccattttcccaatctcaccaatgaacaagacactcat-gaattttcactctcccaaggtgtttacaattatttcccaactctagaatc 41819757  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    ||||| | |||||||||||||||  ||||| |||||||||| ||| |||||||||||||||||||| |||||| || |||||||||||||||||| ||||    
T  41819758 taaccgctaaaagagaaccaacc--cttag-ctttgatttcataaagatcttctcttttggtttcataagactcactcaagttgctcacaaatgagtctc 41819854  T
Q  205 cactcatgtgtttccca 221  Q
    |||||||||||||||||    
T  41819855 cactcatgtgtttccca 41819871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 54593736 - 54593520
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54593736 cctaatttctgcacattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 54593639  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||| |||||  ||||| |||||||||| ||||||||||||| |||||||||||||||||| || ||||||||||||||| ||||||    
T  54593638 taacccccaaaagagaa-caacc--cttagcctttgatttcactaaggatcttctattttggtttcacaagactcactcaagttgctcacaaaagactct 54593542  T
Q  204 ccactcatgtgtttcccatccc 225  Q
    |||||||||||||| |||||||    
T  54593541 ccactcatgtgttttccatccc 54593520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 4569984 - 4569770
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||||||||| |||||| ||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  4569984 cctaatttctacccattttcccaatctcaccaaagaacaaaacactcaatga-ttttcactcacccaaggtgtttacaattgttttccaactctagaatc 4569886  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||| |||||||||||||||||  ||||| |||||||||| |||| |||| |||||||||||||||||||||| |||||||||||||||||| ||||||    
T  4569885 taaccaccaaaagagaaccaacc--cttagcctttgatttcactaaagatcatctcttttggtttcacaagactcacccaagttgctcacaaaagactct 4569788  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  4569787 ccactcatgtgtttccca 4569770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 49199608 - 49199820
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  49199608 taatttctacccattttcccaatctcaccaacgaacaagacactcatg--attttcactctcccaaagtgtttacaattgtttcccaactctagaatcta 49199705  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagact-tacccaagttgctcacaaatgactctc 204  Q
    |||||||||||||||||||||   |||| |||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||    
T  49199706 acccccaaaagagaaccaacc--attagcctttgatttcactaaggatcttctcttttggtttcacaagactcaacccaagttgctcacaaaagactctc 49199803  T
Q  205 cactcatgtgtttccca 221  Q
    ||||||| |||||||||    
T  49199804 cactcatatgtttccca 49199820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 30236157 - 30235948
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  30236157 cctaatttctacccattttcccaatctcatcaatgaacaagacactcatg--attttcactatcccaaggtgtttacaattgtttcccaactctagaatc 30236060  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||||||| |   |||| ||| |||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  30236059 taacccccaaaagagaaccaatc--attagccttcgatttcactaaggatcttctcttttggtttcacaagactcacccaacttgctcacaaatgactct 30235962  T
Q  204 ccactcatgtgttt 217  Q
    |||||| |||||||    
T  30235961 ccactcttgtgttt 30235948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 47304281 - 47304071
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||   ||||||||||||||| |||||||| |||||||| ||||||||||||||||    
T  47304281 taatttctacccattttctcaatctcacaaatgaacaagacactcatg--attttcactctcccagggtgtttaaaattgttttccaactctagaatcta 47304184  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    |||||||||||||||||||||  |||||| ||||||||| |||||||| |||||||||||||| |||||||| ||| ||||||||||||||  |||||||    
T  47304183 acccccaaaagagaaccaacc--cttagtttttgatttcactaaggatattctcttttggttttacaagactcacctaagttgctcacaaa-aactctcc 47304087  T
Q  206 actcatgtgtttccca 221  Q
    ||||||||||||||||    
T  47304086 actcatgtgtttccca 47304071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 30 - 221
Target Start/End: Complemental strand, 40913350 - 40913158
Alignment:
Q  30 ctcaccaatgaacaagacactcattgaattttcac----tctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaa 125  Q
    ||||||||||||||||||||||||  |||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40913350 ctcaccaatgaacaagacactcat--aattttcacgtactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaa 40913253  T
Q  126 ccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    ||  ||||  |||| ||||| ||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  40913252 cc--cttaacctttaatttcactaaggatcttctcttttgctttcacaagactcacccaatttgctcacaaatgactctccactcatgtgtttccca 40913158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 5434013 - 5434224
Alignment:
Q  5 cctaatttctacccattttctc--aatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaa 102  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||||||||||| ||    
T  5434013 cctaatttctacc-attttctcccaatctcaccaatgaacaagacactcaatga-ttttcactcacc-aaggtgtttacaattgtttcccaactctataa 5434109  T
Q  103 tctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactc 202  Q
    ||||||||||||||||||| ||| | |  |||||||||||| | ||||||||||||||||||||||| ||||||| |||||| ||||||||||| |||||    
T  5434110 tctaacccccaaaagagaatcaatctt--tagtctttgattacataaggatcttctcttttggtttcccaagactcacccaacttgctcacaaaagactc 5434207  T
Q  203 tccactcatgtgtttcc 219  Q
    |||||||||||||||||    
T  5434208 tccactcatgtgtttcc 5434224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 43401938 - 43402139
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||| |||||||||||||||        
T  43401938 cctaatttctacccattttcccaatctcaccaatgaacaagacactcat--gattttcactctcccaaggtgtttacaatcgtttcccaactctag---- 43402031  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
            |||||||||||||||  | ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  43402032 --------aaaagagaaccaacc--catagcctttgatttcactaaggatcttctcttttggtttcacaagacttacccaagttgttcacaaatgattct 43402121  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  43402122 ccactcatgtgtttccca 43402139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 37 - 217
Target Start/End: Original strand, 55302133 - 55302310
Alignment:
Q  37 atgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtc 136  Q
    |||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||||  | ||| |    
T  55302133 atgaacaagacactcatg--attttcactctcccaaggtatttacaattgtttcccaactctataatctaacctacaaaagagaaccaacc--cctagcc 55302228  T
Q  137 tttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgttt 217  Q
    ||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| || |||||||||||||||||    
T  55302229 tttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaagaatctccactcatgtgttt 55302310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 43403881 - 43404078
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||| ||||||||||||||||||||||| |||        
T  43403881 cctaatttctacccattttcccaatctcaccaatgaacaagacactcat--gattttcactctcccaaagtgtttacaattgtttcccaactttag---- 43403974  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
            |||||||||||||||  | ||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||    
T  43403975 --------aaaagagaaccaacc--catagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcccaaatgactct 43404064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 127
Target Start/End: Original strand, 31340340 - 31340457
Alignment:
Q  8 aatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaa 107  Q
    |||||||||| |||||| ||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31340340 aatttctaccaattttcccaatctcaccaatgaacaaaacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatctaa 31340437  T
Q  108 cccccaaaagagaaccaacc 127  Q
    |||| ||||| | |||||||    
T  31340438 cccctaaaagggcaccaacc 31340457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 1683440 - 1683311
Alignment:
Q  85 tgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaa 184  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||||  ||| ||||||||| ||||||||||||||||||||| |||||||||| ||| ||    
T  1683440 tgtttcccaactctagattctaacccc-aaaagataaccaaccct--tagcctttgattttctaaggatcttctcttttggtctcacaagactcaccaaa 1683344  T
Q  185 gttgctcacaaatgactctccactcatgtgttt 217  Q
    |||||||| |||||| | |||||||||||||||    
T  1683343 gttgctcataaatgattatccactcatgtgttt 1683311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 26323206 - 26323385
Alignment:
Q  1 caaacctaatttctacccattttctcaatctca-ccaatgaacaagacactcattgaattttcactctcccaaggtgtttac-aattgtttcccaactct 98  Q
    |||||||||||| ||||| |||||||||||||| || |||||||||||||| | ||| | ||||||| | |||||||||| | |||||||||||||||||    
T  26323206 caaacctaatttttaccc-ttttctcaatctcatcccatgaacaagacacttaatga-tgttcactcactcaaggtgtttcccaattgtttcccaactct 26323303  T
Q  99 agaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttaccc 182  Q
    | |||||||||| ||||||||||||||||  |||||  ||||||||||||||||| |||| ||||||| || ||||||| ||||    
T  26323304 aaaatctaaccctcaaaagagaaccaacc--cttagcttttgatttcctaaggatattcttttttggtctcccaagactcaccc 26323385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 29196523 - 29196612
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  29196523 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaaatgtttcccaac 29196612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 44700614 - 44700703
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  44700614 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaaatgtttcccaac 44700703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 5236592 - 5236680
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  5236592 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 5236680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 40734530 - 40734442
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  40734530 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 40734442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 40735415 - 40735337
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| | ||||||||||||||||    
T  40735415 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcacttttccaaggtgtttacaat 40735337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 96
Target Start/End: Original strand, 9666604 - 9666693
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaact 96  Q
    ||||||||||||||||||  ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||||    
T  9666604 ctaatttctacccatttttccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaaatgtttcccaact 9666693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 22835134 - 22835226
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| ||||||||| |||||| |||||||||||    
T  22835134 caaacctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgattacaa-tgtttcccaac 22835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 31314477 - 31314389
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||| ||||| |||||||||| |||||||||||    
T  31314477 cctaatttctacccattttctcaatctcacctatgaacaagacactcaatg-attttcactcacccaaagtgtttacaa-tgtttcccaac 31314389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 44331577 - 44331489
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  44331577 cctaatttctacccattttcctaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 44331489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 35138838 - 35139026
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcac-caatgaacaagacactcattgaattttcactctcccaaggtgttt-acaattgtttcccaactct 98  Q
    ||||| |||||||||||||||| |||||||||   | |||||||||||||||| ||| |||||||||||||||||||||| |||||||||||| |||| |    
T  35138838 caaacataatttctacccattt-ctcaatctctttccatgaacaagacactcaatga-ttttcactctcccaaggtgtttcacaattgtttcc-aacttt 35138934  T
Q  99 agaatctaacccccaaaagagaaccaaccctcttag-tctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctca 192  Q
    | ||| ||||||| |||||||||  ||||||  ||| | ||| |||||||||||||||||| ||||||| || ||||||| |  |||||||||||    
T  35138935 aaaatttaacccc-aaaagagaattaaccct--tagcttttttatttcctaaggatcttctattttggtctcccaagactcattcaagttgctca 35139026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 53921635 - 53921717
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||    
T  53921635 caaacctaatttctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtttttacaat 53921717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 19684025 - 19684113
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||| ||||||||||||| ||| || |||||||||| |||||||||||||||| |||||||||||    
T  19684025 cctaatttctacccattttcccaatctcacaaatgaacaagacattcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 19684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 29682395 - 29682303
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| |||||||||||||||||| ||||||||| ||| ||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  29682395 caaacataatttctacccattttcccaatctcacaaataaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 29682303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 39153493 - 39153585
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||| |||||||||  |||||||||||||||| || ||||||| || |||||||||||||||| |||||||||||    
T  39153493 caaacctaatttctacccattttcccaatctcacacatgaacaagacactcaatg-attttcattcacccaaggtgtttacaa-tgtttcccaac 39153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 760880 - 760791
Alignment:
Q  4 acctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||||||||||  |||||||||||| || |||||||||||    
T  760880 acctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcatccaaggtgtttataa-tgtttcccaac 760791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 32891138 - 32891049
Alignment:
Q  2 aaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttccca 93  Q
    |||| ||||||||||||||||||||||||||||| | |||||||||||||| || ||||| |||| |||||||||||||||| |||||||||    
T  32891138 aaacttaatttctacccattttctcaatctcaccgaagaacaagacactcaatg-atttttactcacccaaggtgtttacaa-tgtttccca 32891049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 26386613 - 26386692
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttac 81  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| ||||| || |||||    
T  26386613 caaacctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaagtatttac 26386692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 51398846 - 51398768
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  51398846 cctaatttctacccatttttccaatctcatcaatgaacaagacactcaatg-attttcactcatccaaggtgtttacaat 51398768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9581318 - 9581227
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||| |  |||| ||| ||||||||||||||||| ||| ||||||||| |||||||||||||||| |||||||||||    
T  9581318 caaacctaatttctacccatttccg-aatcccacaaatgaacaagacactcaatga-ttttcactcacccaaggtgtttacaa-tgtttcccaac 9581227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 23392041 - 23392133
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| |||||||||| ||||||| ||| |||||||||||| |||||||| | || |||||||||| |||||||||||||||| |||||||||||    
T  23392041 caaacttaatttctactcattttcccaaactcaccaatgaaaaagacactaaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 23392133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 34795819 - 34795713
Alignment:
Q  87 tttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagt 186  Q
    |||||||||| |||||| ||||| | |||||||||||| ||||  ||| ||||||||| ||||||||||||||||||||| || ||||||| ||||||||    
T  34795819 tttcccaactttagaatttaaccac-aaaagagaaccatccct--tagcctttgattttctaaggatcttctcttttggtctcccaagactcacccaagt 34795723  T
Q  187 tgctcacaaa 196  Q
    | || |||||    
T  34795722 ttcttacaaa 34795713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 37408490 - 37408403
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| | |||||||||||  | ||||||||||||| |||||||||||    
T  37408490 cctaatttctaccctttttcccaatctcaccaatgaacaagacactcaat-aattttcactc-actaaggtgtttacaa-tgtttcccaac 37408403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 45095195 - 45095109
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  45095195 cctaatttctacc-attttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 45095109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 46173370 - 46173311
Alignment:
Q  33 accaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||    
T  46173370 accaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaa 46173311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 196
Target Start/End: Complemental strand, 20937613 - 20937501
Alignment:
Q  81 caattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttac 180  Q
    ||||| |||| ||||||||||||||| | |||||||||||||||||| |  ||  ||||||||||||||| ||||||||||||||| || ||||| | ||    
T  20937613 caattatttctcaactctagaatcta-ctcccaaaagagaaccaacctt--tatcctttgatttcctaagaatcttctcttttggtctcccaagaatcac 20937517  T
Q  181 ccaagttgctcacaaa 196  Q
    |||||||  |||||||    
T  20937516 ccaagtttgtcacaaa 20937501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 5258280 - 5258368
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  5258280 cctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 5258368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 7762297 - 7762220
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||| || ||||||||||  |||||||||| |||||    
T  7762297 cctaatttctaccctttttctcaatctcaccaatgaataagacactcaatg-attttcactc-accaaggtgttcacaat 7762220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 16499062 - 16498984
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||||||| || |||||||||  |||||||||||||||||    
T  16499062 cctaatttctatccgttttcccaatctcacaaatgaacaagacactcaatg-attttcactaccccaaggtgtttacaat 16498984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 57 - 166
Target Start/End: Complemental strand, 39127528 - 39127421
Alignment:
Q  57 attttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatct 155  Q
    ||||||||||| ||||||| ||| | |||||||||| ||||||||||| ||||| | |||||||||| ||||||  ||| |||||||||||||||| | |    
T  39127528 attttcactcttccaaggtattttccaattgtttccaaactctagaatttaaccac-aaaagagaactaaccct--tagcctttgatttcctaagggtat 39127432  T
Q  156 tctcttttggt 166  Q
    |||||||||||    
T  39127431 tctcttttggt 39127421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 23410462 - 23410543
Alignment:
Q  2 aaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||| ||||||||||||||||||  ||| |||| ||||||||||||||||| || |||||||||| | |||||||||||||||    
T  23410462 aaacataatttctacccattttccaaatttcactaatgaacaagacactcaatg-attttcactcactcaaggtgtttacaat 23410543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 29810899 - 29810812
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||  ||||||  ||||||||||||||| |||||| ||| ||| ||||||||| |||||||||||||||| |||||||||||    
T  29810899 ctaatttctacatattttcctaatctcaccaatgaataagacattcaatga-ttttcactcacccaaggtgtttacaa-tgtttcccaac 29810812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 5260459 - 5260547
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| |||| | ||||||||||||||| ||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  5260459 cctaatttctacccttttttcccaatctcaccaatgaccaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 5260547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 23198076 - 23198161
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||  ||||| |||||||||||| |||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  23198076 ctaatttctaccatttttcccaatctcaccaa-gaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 23198161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 23200275 - 23200360
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||  ||||| |||||||||||| |||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  23200275 ctaatttctaccatttttcccaatctcaccaa-gaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 23200360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 9636262 - 9636340
Alignment:
Q  5 cctaatttctacccattt-tctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| ||| || ||||||||||||||| ||||||||||| || ||||||||||  ||||||||||||||||    
T  9636262 cctaatttctacccttttctcccaatctcaccaatgaccaagacactcaatg-attttcactc-accaaggtgtttacaat 9636340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 29813095 - 29813017
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||||||| |||||  ||||||||||||| |||||| | |||| || |||||||||| ||||| |||||||||||    
T  29813095 cctaatttctacctatttttccaatctcaccaattaacaagcccctcaatg-attttcactcacccaatgtgtttacaat 29813017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 2075194 - 2075281
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||| |||||  ||||| |||| |||||||||||||||||||||| || ||||||||||   ||||||||||| || |||||||||||    
T  2075194 ctaattactaccatttttcccaatatcaccaatgaacaagacactcaatg-attttcactc-agcaaggtgtttataaatgtttcccaac 2075281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 28074488 - 28074431
Alignment:
Q  168 tcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttcccatccc 225  Q
    |||||||||| ||| ||||| ||| |||  ||||||||||||||||||||||||||||    
T  28074488 tcacaagactcacctaagtttctctcaatagactctccactcatgtgtttcccatccc 28074431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 7764496 - 7764422
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| ||||| |  |||||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  7764496 cctaatttctaccc-ttttccc--tctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaat 7764422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 36796307 - 36796231
Alignment:
Q  145 cctaaggatcttctcttttggtttcac-aagacttacccaagttgctcacaaatgactctccactcatgtgtttccc 220  Q
    ||||||||||| | |||||||||||   |||| | |||||||||||| || ||||||||||||||| ||||| ||||    
T  36796307 cctaaggatctacacttttggtttccttaagattcacccaagttgctaaccaatgactctccactcttgtgtctccc 36796231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 379416 - 379197
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctag 100  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  379416 caaacctaatttctacccattttctcaatctcacaaatgaacaagatactaattgaattttcactctcccaaggtgtttacaattgtttcccaactctag 379317  T
Q  101 aatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgac 200  Q
    |||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||    
T  379316 aatctaacccacaaaagagaaccaacc--cttagcctttgatttcctaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaatgac 379219  T
Q  201 tctccactcatgtgtttcccat 222  Q
    ||||||||||||||||||||||    
T  379218 tctccactcatgtgtttcccat 379197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 50673982 - 50674195
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||| ||||||||||||||||| |||||||| |||||||||   ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  50673982 cctaatttctactcattttctcaatctcacaaatgaacacgacactcatg--attttcactctcccaaggtgtttacaattgttttccaactctagaatc 50674079  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  50674080 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 50674177  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  50674178 ccactcatgtgtttccca 50674195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 54883052 - 54882839
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  54883052 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 54882955  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||| ||||||    
T  54882954 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacgagactcacccaagtttctcacaaaagactct 54882857  T
Q  204 ccactcatgtgtttccca 221  Q
     |||||||||||||||||    
T  54882856 acactcatgtgtttccca 54882839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 41964447 - 41964234
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41964447 cctaatttctacccattttcccaatttcaccaacgaacaagacactcat-gaattttcactttcccaaggtgtttacaattgtttcccaactctagaatc 41964349  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||| |||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  41964348 taacccc-aaaagagaaccaaccct--tagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 41964252  T
Q  204 ccactcatgtgtttccca 221  Q
    | ||||||||||||||||    
T  41964251 ctactcatgtgtttccca 41964234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 35662473 - 35662265
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||||||||||||    
T  35662473 cctaatttctacccattttttcaatctcaccaatgaacaagacactcat-gatttttcacactctcaaggtgtttacaattgtttcccaactctagaatc 35662375  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    |||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  35662374 taacacccaaaagagaaccaaccct--tag-ctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaagaactctc 35662278  T
Q  205 cactcatgtgttt 217  Q
    || ||||||||||    
T  35662277 cattcatgtgttt 35662265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 46703532 - 46703316
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  46703532 cctaatttctactcattttcccaatctcaccaatgaacaagacactcat-gaattttcactctcccaaggtgtttacaattgtttcccaacactataatc 46703434  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    |||||||||||||||||||||  || |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||| |||||||    
T  46703433 taacccccaaaagagaaccaa--cttttagcctttgatttcctaaggattttctcttttggtttcacaagactcacccaagttgctgacaaaagactctc 46703336  T
Q  205 cactcatgtgtttcccatccc 225  Q
    || |||||| |||||||||||    
T  46703335 cattcatgt-tttcccatccc 46703316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 12073428 - 12073215
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctag 100  Q
    |||||||||||||||||||||||| ||||||||||||| | ||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||    
T  12073428 caaacctaatttctacccattttcccaatctcaccaataagcaagacactcatg--attttcacactcccaaggtgtttacaattgtttcccaactctag 12073331  T
Q  101 aatctaacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatga 199  Q
    |||||||||||||||||||||||||||  |||||  ||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| ||    
T  12073330 aatctaacccccaaaagagaaccaacc--cttagcatttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaaga 12073233  T
Q  200 ctctccactcatgtgttt 217  Q
    |||| |||||||||||||    
T  12073232 ctcttcactcatgtgttt 12073215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 8665440 - 8665226
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  8665440 cctaatttctacccattttcccattctcaccaatgaacaagacactcat-gaattttcactcttccaaggtgtttacaattgtttcccaactccagaatc 8665342  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||| ||||||  | | ||  |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  8665341 taacccccaaaagaaaaccaa--cacataacctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 8665244  T
Q  204 ccactcatgtgtttccca 221  Q
    |||||| |||||||||||    
T  8665243 ccactcctgtgtttccca 8665226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 55085503 - 55085714
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    ||||||||||| |||||| ||||||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  55085503 taatttctacctattttc-caatctcaccaatgaacaagacagtcaatga-ttttcactcacccaaggtgtttacaattgtttccgaactctagaatcta 55085600  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    ||||||||| ||||| |||||||  ||| |||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  55085601 acccccaaaggagaatcaaccct--tagcctttgatttcactaaggatcttctcttttggtttcacaagactcacacaagttgctcacaaatgactctcc 55085698  T
Q  206 actcatgtgtttccca 221  Q
    ||||||||||||||||    
T  55085699 actcatgtgtttccca 55085714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 6655986 - 6655775
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6655986 taatttctacccattttttcaatctcacaagtgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 6655889  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    ||||| ||||||||| ||||| |  ||| |||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  6655888 accccaaaaagagaaacaacctt--tagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatgactctcc 6655791  T
Q  206 actcatgtgtttccca 221  Q
    ||||||||||||||||    
T  6655790 actcatgtgtttccca 6655775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 8648171 - 8647957
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||| |||||||| || ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||| ||||| ||||||    
T  8648171 cctaatttctatccattttcccattctcaccaatgaacaagacactcat-gaattttcactcttccaaggtgtttacagttgtttcctaactccagaatc 8648073  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||  | | ||   ||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  8648072 taacccccaaaagagaaccaa--cacataacatttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaagactct 8647975  T
Q  204 ccactcatgtgtttccca 221  Q
    |||||| |||||||||||    
T  8647974 ccactcctgtgtttccca 8647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 12119568 - 12119361
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    |||||||||| | ||||  |||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  12119568 taatttctactcttttttccaatctcacctatgaacaagacactcattga-ttttcactctcccaaggtatttacaattgtttcccaactctataatcta 12119470  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcca 206  Q
    |||||||||||||||||||||||  ||  ||| |||||| ||||||||||||||||||||||||||||||  |||||| |||||||||||||| || |||    
T  12119469 acccccaaaagagaaccaaccct--taa-cttcgatttcttaaggatcttctcttttggtttcacaagacacacccaaattgctcacaaatgattcacca 12119373  T
Q  207 ctcatgtgtttc 218  Q
    || |||||||||    
T  12119372 ctaatgtgtttc 12119361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 2209745 - 2209576
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2209745 cctaatttctacccattttcccaatctcaacaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattatttcccaactctagaatc 2209648  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagact 177  Q
    |||||||||||||||||||||||  | ||| |||||||||| ||||||||||||||||||||||||||||||||    
T  2209647 taacccccaaaagagaaccaacc--catagcctttgatttcactaaggatcttctcttttggtttcacaagact 2209576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 50262839 - 50263047
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    ||||||| | |||||||| ||||||||   || ||||||||||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50262839 taatttcgatccattttcccaatctca---ataaacaagacactcatg--attttcactctcccaaggtatttacaattgtttcccaactctagaatcta 50262933  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    |||||||||||||||||||||   |||| |||||||||| |||||| ||||||||||||||||||||||| | ||| | |||||||||||| ||||||||    
T  50262934 acccccaaaagagaaccaacc--attagcctttgatttcactaagggtcttctcttttggtttcacaagagtcaccgaggttgctcacaaaagactctcc 50263031  T
Q  206 actcatgtgtttccca 221  Q
    ||||||||||||||||    
T  50263032 actcatgtgtttccca 50263047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 37 - 221
Target Start/End: Complemental strand, 33989862 - 33989681
Alignment:
Q  37 atgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtc 136  Q
    |||||||| ||||||| | |||||| ||||  |||||||||||||| |||||||||||||||||||||||||| |||||||||||| || |||  ||| |    
T  33989862 atgaacaaaacactcaat-aatttttactcaaccaaggtgtttacagttgtttcccaactctagaatctaacctccaaaagagaacaaatcct--tagcc 33989766  T
Q  137 tttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    ||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  33989765 tttgattacctaaggatcttctcttttggtttcaaaagactcacccaagttgctcacaaatgactctccactcatgtgtttccca 33989681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 82 - 221
Target Start/End: Complemental strand, 26364222 - 26364084
Alignment:
Q  82 aattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttac 180  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||  |||  ||||||||| |||||||||||||||||||||||||||||||| ||    
T  26364222 aattgtttcccaactctaaaatctaaccaccaaaagagaaccaaccct--tagcatttgatttcactaaggatcttctcttttggtttcacaagactcac 26364125  T
Q  181 ccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  26364124 ccaagttgctcacaaatgactctccactcatgtgtttccca 26364084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 40632476 - 40632355
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatct 105  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  40632476 ctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttctcaactctagaatct 40632379  T
Q  106 aacccccaaaagagaaccaaccct 129  Q
    ||||||||||||||||||||||||    
T  40632378 aacccccaaaagagaaccaaccct 40632355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 27417101 - 27417273
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||||||   ||||||||||||||    ||||||||||||||||  ||||| ||||||    
T  27417101 cctaatttctacacattttaccaatctcaccaatgaacaagacactcatg--attttcactctccc----tgtttacaattgtttcaaaactcaagaatc 27417194  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaa 184  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||||| ||||||||| |||||||| ||||||    
T  27417195 taacccccaaaagagaaccaacc--cttagtctttgatttcactaaggatcttcttttttggttttacaagactcacccaa 27417273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 41639458 - 41639345
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||| |   ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  41639458 cctaatttctacccattttcccaatcttaccaataaacaagacactcgtg--attttcactctcctaaggtgtttacaattgtttcccaactctagaatc 41639361  T
Q  105 taacccccaaaagaga 120  Q
    ||||||||||||||||    
T  41639360 taacccccaaaagaga 41639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 145 - 221
Target Start/End: Complemental strand, 40630879 - 40630803
Alignment:
Q  145 cctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  40630879 cctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttccca 40630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 187
Target Start/End: Complemental strand, 41961368 - 41961264
Alignment:
Q  81 caattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttac 180  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||  |||||  ||||||||||||||||| |||| ||||||| || ||||||| ||    
T  41961368 caattgtttcccaactctagaatctaaccctcaaaagagaaccaacc--cttagcttttgatttcctaaggatattcttttttggtctcccaagactcac 41961271  T
Q  181 ccaagtt 187  Q
    |||||||    
T  41961270 ccaagtt 41961264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 48893778 - 48893856
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  48893778 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 48893856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5871856 - 5871764
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  5871856 caaacctaatttctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 5871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13009563 - 13009655
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  13009563 caaacctaatttctacccattttcacaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 13009655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 21688281 - 21688186
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctaga 101  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||   |||||||||| ||||||||||||| ||||||||||||||||||||    
T  21688281 cctaatttctacccatttttctcaatctcaccgatgaacaagacactcatg--attttcactcccccaaggtgtttagaattgtttcccaactctaga 21688186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 52095498 - 52095586
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  52095498 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 52095586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 52467486 - 52467579
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||| ||| ||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  52467486 caaacctaatttctacccattttcccaacctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaaatgtttcccaac 52467579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 4 - 93
Target Start/End: Complemental strand, 31474183 - 31474096
Alignment:
Q  4 acctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttccca 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||| |||||||||| |||||||||    
T  31474183 acctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcactcacccaaagtgtttacaa-tgtttccca 31474096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 36463525 - 36463615
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| |||| |||||||| |||||||||||||||| |||||||||||||    
T  36463525 cctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgaa-tttcactcacccaaggtgtttacaa-tgtttcccaactc 36463615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 217
Target Start/End: Complemental strand, 33089841 - 33089722
Alignment:
Q  85 tgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaa 184  Q
    ||||||||||||||| ||||||||| |||||||||||||||||   |||| ||||||||| ||||||||||||||||||||| |           |||||    
T  33089841 tgtttcccaactctataatctaacctccaaaagagaaccaacc--tttagcctttgattttctaaggatcttctcttttggtct-----------cccaa 33089755  T
Q  185 gttgctcacaaatgactctccactcatgtgttt 217  Q
    |||||||||||||||||||||||||||||||||    
T  33089754 gttgctcacaaatgactctccactcatgtgttt 33089722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 5429711 - 5429623
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  5429711 cctaatttctactcattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 5429623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 26175772 - 26175860
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  26175772 cctaatttctccccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 26175860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 37229859 - 37229947
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||||    
T  37229859 cctaatttctacc-attttcccaatctcaccaatgaacaagacactcattg-attttcactcacccaaggtgtttacaaatgttttccaac 37229947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 54200042 - 54200130
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| ||||| |||||||||| |||||||||||    
T  54200042 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaatgtgtttacaa-tgtttcccaac 54200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 36994554 - 36994478
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  36994554 taatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 36994478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 26699598 - 26699786
Alignment:
Q  22 ttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaa 121  Q
    |||| |||||| | ||| ||||||||| ||| ||| ||||||||| ||||| ||||||||||||||||||||||| || ||||||||||| |||||||||    
T  26699598 ttctgaatctctctaataaacaagacattcaatga-ttttcactcacccaaagtgtttacaattgtttcccaactttataatctaacccctaaaagagaa 26699696  T
Q  122 ccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgt 213  Q
    ||||||   |||  |||||||| | ||| |||| |||||||| ||||   |||||| | |  ||||| |||| ||||| |||||||||||||    
T  26699697 ccaacc--tttaacctttgattacataaagatcatctcttttagttttctaagactcatctgagttgttcactaatgaatctccactcatgt 26699786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24969148 - 24969055
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||||| |||| || |||||||||| |||||||||||||||| |||||||||||    
T  24969148 caaatctaatttctacccatttttccaatctcaccaaagaacaagactctcaatg-attttcactcacccaaggtgtttacaaatgtttcccaac 24969055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 47038546 - 47038633
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| ||||||||||||| || |||||||||||    
T  47038546 cctaatttctacccattttc-caatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttataa-tgtttcccaac 47038633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 52082793 - 52082881
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||| ||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||| |||||||||||    
T  52082793 cctagtttctacccattttcccaatctcaccaatgaacaagacagtcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 52082881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 3786034 - 3785926
Alignment:
Q  93 aactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctca 192  Q
    |||||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||| |||||||||||| || |||||||  | ||| |||||||    
T  3786034 aactctagaatcta-cccccaaaagagaaccaac--tcttagcctttgatttcctaaggatattctcttttggtctcccaagactcgcacaatttgctca 3785938  T
Q  193 caaatgactctcc 205  Q
    |||| ||||||||    
T  3785937 caaa-gactctcc 3785926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 12745572 - 12745659
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    ||||||||||||||||||||  |||||| ||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||||    
T  12745572 cctaatttctacccattttcctaatctcgccaatgaacaagacactcaatg-attttcactcacccaaggtgtttac-attgtttcccaa 12745659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 51337094 - 51337018
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||| |||||||||||||||||||||||| |||||||| || |||||||||| |||||||||||||||||    
T  51337094 taatttctaccctttttctcaatctcaccaatgaacaggacactcaatg-attttcactcacccaaggtgtttacaat 51337018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 41639295 - 41639207
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| |||||| |||||| |||||||||||| |   ||||||||||||| |||||||||||||||||| ||||||    
T  41639295 cctaatttctacccattttcccaatcttaccaataaacaagacactcgt--gattttcactctcctaaggtgtttacaattgttacccaac 41639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 9927594 - 9927681
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  9927594 cctaatttctacccattttcccaatctcaccaatgaataagacactcagtg-attttcactc-accaaggtgtttacaa-tgtttcccaac 9927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 12739686 - 12739774
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| || |||| ||||| || ||||||||||||| |||||||||||    
T  12739686 cctaatttctatccattttcccaatctcaccaatgaacaagacactcaatg-atttccactcacctaaggtgtttacaa-tgtttcccaac 12739774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 12747892 - 12747980
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||| || |||| ||||| || ||||||||||||| |||||||||||    
T  12747892 cctaatttctatccattttcccaatctcaccaatgaacaagacactcaatg-atttccactcacctaaggtgtttacaa-tgtttcccaac 12747980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 32091514 - 32091324
Alignment:
Q  1 caaacctaatttctacccattttctcaatct-caccaatgaacaagacactcattgaattttcactctcccaaggtgttta-caattgtttcccaactct 98  Q
    ||||||||||||||| | |||||| |||||| | || |||||||||| ||||| |||  |||| ||| ||||| ||||||  ||||||||||| |||| |    
T  32091514 caaacctaatttctagc-attttcccaatcttctcccatgaacaagagactcaatga--tttcgctcacccaatgtgtttctcaattgtttccaaacttt 32091418  T
Q  99 agaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaa 195  Q
    ||||||| ||||| |||| ||||||||| || |  | |||||||||||||||||||||||| | |||| || ||| |||||||||||||| ||||||    
T  32091417 agaatcttaccccaaaaa-agaaccaacacttt--gcctttgatttcctaaggatcttctcctctggtctcccaaaacttacccaagttgttcacaa 32091324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 34570550 - 34570638
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| || |||||||||| |||||| ||||| ||| |||||||||||    
T  34570550 cctaatttctacctattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaagatgttttcaa-tgtttcccaac 34570638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 56178773 - 56178860
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  56178773 cctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 56178860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 22882964 - 22883109
Alignment:
Q  82 aattgtttcccaactctagaatctaaccccc-aaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttac 180  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||||| |  ||  ||||||||| ||||||||||||||||||||| ||  ||||||  |    
T  22882964 aattgttttccaattctagaatctaaccccccaaaagagaaccaaccat--tatcctttgattttctaaggatcttctcttttggtctcctaagactcgc 22883061  T
Q  181 ccaagttgctcacaaatgactctccactcatgtgtttcccatccctatg 229  Q
    |||| ||||||||||| |||||||   | |||||||||| | |||||||    
T  22883062 ccaaattgctcacaaa-gactctcatttgatgtgtttcctaaccctatg 22883109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 82 - 229
Target Start/End: Original strand, 22934628 - 22934773
Alignment:
Q  82 aattgtttcccaactctagaatctaaccccc-aaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttac 180  Q
    |||||||| |||| ||||||||||||||||| ||||||||||||||| |  ||  ||||||||| ||||||||||||||||||||| ||  ||||||  |    
T  22934628 aattgttttccaattctagaatctaaccccccaaaagagaaccaaccat--tatcctttgattttctaaggatcttctcttttggtctcctaagactcgc 22934725  T
Q  181 ccaagttgctcacaaatgactctccactcatgtgtttcccatccctatg 229  Q
    |||| ||||||||||| |||||||   | |||||||||| | |||||||    
T  22934726 ccaaattgctcacaaa-gactctcatttgatgtgtttcctaaccctatg 22934773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 29254525 - 29254438
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||| || ||||||| || ||||| |||||||||| |||||||||||    
T  29254525 ctaatttctacccaatttcccaatctcaccaatgaacaagacactcaatg-attttcattcacccaatgtgtttacaa-tgtttcccaac 29254438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 45687316 - 45687407
Alignment:
Q  2 aaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||| |||   || |||||||| |||||||||||||||| |||||||||||    
T  45687316 aaacctaatttcttcccattttcccaatctcaccaatgaacaagacaatca-aaaaatttcactcacccaaggtgtttacaa-tgtttcccaac 45687407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 217
Target Start/End: Complemental strand, 34112539 - 34112435
Alignment:
Q  111 ccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactca 210  Q
    ||||||||||||||| | |  ||| ||||||||||||||||||||||  ||||| |||  ||||| | | |||||||||||||| |||||||||||||||    
T  34112539 ccaaaagagaaccaaactt--tagcctttgatttcctaaggatcttcagttttgtttttccaagattcatccaagttgctcacagatgactctccactca 34112442  T
Q  211 tgtgttt 217  Q
    |||||||    
T  34112441 tgtgttt 34112435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 48143059 - 48142986
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  48143059 ttttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 48142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 3913479 - 3913408
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtt 78  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||||| || |||||||||| |||||||||||    
T  3913479 ctaatttctactcattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtt 3913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 4587988 - 4587902
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||  ||||| |||| ||||||||||||| |||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  4587988 taatttctaccttttttcccaatttcaccaatgaacatgacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 4587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 6542332 - 6542405
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||| ||||||||||||||||||| | ||||||||||| |||||||||||||||| |||||||||||    
T  6542332 ttttcccaatctccccaatgaacaagacactcaat-aattttcactcacccaaggtgtttacaa-tgtttcccaac 6542405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 196
Target Start/End: Original strand, 35369607 - 35369763
Alignment:
Q  35 caatgaacaagacactcattgaattttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaaccctctta 133  Q
    |||||||||||||||||| ||| |||||||||| | ||||||||| | ||||||||||||| |||| |||| |||||| |||||||||||||||  ||||    
T  35369607 caatgaacaagacactcaatga-ttttcactctac-aaggtgtttcccaattgtttcccaattctataatccaacccc-aaaagagaaccaacc--ctta 35369701  T
Q  134 gtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaa 196  Q
    | |||||| |||| || |||||||| ||||| | ||   ||||| |||||||||||| |||||    
T  35369702 gcctttga-ttcccaaagatcttctattttgctatccatagactcacccaagttgcttacaaa 35369763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 26364268 - 26364218
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattg 55  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  26364268 cctaatttctacccattttcccaatctcaccaatgaacaagacactaattg 26364218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 37740657 - 37740570
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  37740657 cctaatttataccctttttccaaatctcaccaatgaacaagacactcagtg-attttcactc-accaaggtgtttacaa-tgtttcccaac 37740570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 5207979 - 5208066
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||||| ||||| ||||| | |||||||||||| |||| | ||| ||||||||| |||||||||||||||| ||||||||||    
T  5207979 cctaatttctaccctttttc-caatcactccaatgaacaagtcactaaatga-ttttcactcacccaaggtgtttacaaatgtttcccaa 5208066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 29999943 - 30000019
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||  | ||||||||||  ||||||||||||||||    
T  29999943 cctaatttctaccc-ttttcccaatctcaccaatgaacaagacactcaacg-attttcactc-accaaggtgtttacaat 30000019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 147 - 221
Target Start/End: Original strand, 46569821 - 46569895
Alignment:
Q  147 taaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    |||||| ||||||||||||||||| |||| | ||| |||||| ||||||| |||| ||||||||| |||||||||    
T  46569821 taaggaccttctcttttggtttcataagattcacctaagttgttcacaaaagactttccactcatttgtttccca 46569895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 85 - 205
Target Start/End: Original strand, 35370553 - 35370669
Alignment:
Q  85 tgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaa 184  Q
    |||||||||| |||| |||||||| || ||||||||||||||| |  ||| ||||||||||| || |||||||| ||||||| ||   ||||| ||||||    
T  35370553 tgtttcccaattctataatctaactcc-aaaagagaaccaaccat--tagcctttgatttcccaaagatcttctattttggtatccatagactcacccaa 35370649  T
Q  185 gttgctcacaaatgactctcc 205  Q
    |||||| ||||| ||||||||    
T  35370650 gttgcttacaaa-gactctcc 35370669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 29056378 - 29056301
Alignment:
Q  17 ccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||| ||||||| | ||||||||| ||||||| ||| |||| |||| |||||||||||| ||| |||||||||||    
T  29056378 ccattttcccaatctctctaatgaacaaaacactcaatgattttt-actcacccaaggtgtttccaaatgtttcccaac 29056301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 93
Target Start/End: Original strand, 5370244 - 5370308
Alignment:
Q  26 caatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttccca 93  Q
    ||||||||||||||||||||||||||| || ||||||||||  |||| |||||||||| |||||||||    
T  5370244 caatctcaccaatgaacaagacactcaatg-attttcactc-accaaagtgtttacaa-tgtttccca 5370308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 46147527 - 46147570
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagaca 48  Q
    |||||||||||||||||||  |||||||||| ||||||||||||    
T  46147527 cctaatttctacccatttttccaatctcaccgatgaacaagaca 46147570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 123
Target Start/End: Original strand, 25723433 - 25723474
Alignment:
Q  82 aattgtttcccaactctagaatctaacccccaaaagagaacc 123  Q
    |||||||| ||| |||||||||||||| ||||||||||||||    
T  25723433 aattgttttccatctctagaatctaacacccaaaagagaacc 25723474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 48142515 - 48142605
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    ||||||||||| | || ||| |||||||| |||||  ||||||||||| ||| ||||||||| ||| | ||||||| || |||||||||||||    
T  48142515 cctaatttctatc-atgttcccaatctcatcaatgggcaagacactcaatga-ttttcactcacccgaagtgtttaaaaatgtttcccaactc 48142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 105
Target Start/End: Complemental strand, 52065578 - 52065530
Alignment:
Q  57 attttcactctcccaaggtgtttacaattgtttcccaactctagaatct 105  Q
    |||||||||| ||||||| ||| |||||||||||||||| | |||||||    
T  52065578 attttcactcacccaaggggttcacaattgtttcccaacccaagaatct 52065530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 167; Significance: 1e-89; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 21593696 - 21593489
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21593696 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 21593599  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  21593598 taacccccaaaagagaaccaaccct--tag-ctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcaaaaatgactctc 21593502  T
Q  205 cactcatgtgttt 217  Q
    |||||||||||||    
T  21593501 cactcatgtgttt 21593489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 17763022 - 17762808
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  17763022 cctaatttctacccattttctcaatctcaccaatgaacaagacactcat-gaattttcactctctcaaagtgtttacaattgtttcccaactctagaatc 17762924  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||| |||| ||||||    
T  17762923 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctctttttgtttcacaagactcacccaagttgctcccaaaagactct 17762826  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  17762825 ccactcatgtgtttccca 17762808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 5043663 - 5043446
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctag 100  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||    
T  5043663 caaacctaatttctactcattttctcaatctcacgaatgaacaagacactcatg--attttcactctcacaaggtgtttacaattgtttcccaactctag 5043566  T
Q  101 aatctaacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatga 199  Q
    |||||||||||||||||||||||||  ||||||| |||||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||| ||    
T  5043565 aatctaacccccaaaagagaaccaa--ctcttagcctttgattccactaaggatcttctcttttggtttcacaagactcacccaaattgctcacaaaaga 5043468  T
Q  200 ctctccactcatgtgtttccca 221  Q
    ||||||||||||||||||||||    
T  5043467 ctctccactcatgtgtttccca 5043446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 2973071 - 2973288
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctag 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||||    
T  2973071 caaacctaatttctacccattttcccaatctcaccaatgaacacgacacttatg--attttcactctcccaaggtgtttacaattgtttcccaactctag 2973168  T
Q  101 aatctaacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatga 199  Q
    ||||||| ||| |||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  2973169 aatctaatccctaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgttcacaaatga 2973266  T
Q  200 ctctccactcatgtgtttccca 221  Q
    |||| || ||||||||||||||    
T  2973267 ctctgcattcatgtgtttccca 2973288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 3808845 - 3809057
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||  |   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3808845 cctaatttctacctattttcccaatctcaccaatgaacaagacacttgtg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 3808942  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||| ||||||||||||  ||| |||||||||| |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||    
T  3808943 taacccccaaaa-agaaccaaccct--tagcctttgatttcactaaggattttctcttttggttttacaagactcacccaagttgctcacaaatgactct 3809039  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  3809040 ccactcatgtgtttccca 3809057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 26 - 221
Target Start/End: Original strand, 603237 - 603429
Alignment:
Q  26 caatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaa 125  Q
    ||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  603237 caatctcaccaatgaacaagacactcatg--attttcactatcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaa 603334  T
Q  126 ccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    ||   |||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||    
T  603335 cc--attagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaggacactccactcatgtgtttccca 603429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 6 - 221
Target Start/End: Original strand, 26830260 - 26830473
Alignment:
Q  6 ctaatttctacccattttctcaatctcacc-aatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26830260 ctaatttctacccatttttccaatctcacccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgttttccaactctagaatc 26830357  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  26830358 taacccccaaaagagaaccaacc--cttagcctttgatttcactaagaatcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactct 26830455  T
Q  204 ccactcatgtgtttccca 221  Q
     | ||||| |||||||||    
T  26830456 gcgctcatctgtttccca 26830473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 5 - 218
Target Start/End: Original strand, 22424963 - 22425171
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||  |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  22424963 cctaatttctacccatttttccaatctcaccaacgaacaagacactcat-gaattttcactctcccaaagtgtttacaattgtttcccaactctataatc 22425061  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    ||||||| |||||||||||||||||  ||| |||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||  ||||||||||     
T  22425062 taacccc-aaaagagaaccaaccct--tag-ctttgatttcctaaggatattctcttttggtttcacaagactaaccgaagttgctcttaaatgactctt 22425157  T
Q  205 cactcatgtgtttc 218  Q
    ||| ||||||||||    
T  22425158 cacccatgtgtttc 22425171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 9183167 - 9183255
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  9183167 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 9183255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 17757997 - 17757903
Alignment:
Q  128 ctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    ||||||| |||||||||| || | ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||    
T  17757997 ctcttagcctttgatttcactgatgatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactctccactcatgtgtttccca 17757903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 28137544 - 28137632
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| || |||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  28137544 cctaatttctacccattttcccattctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 28137632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 25073599 - 25073457
Alignment:
Q  6 ctaatttctacccattttctcaatctca-ccaatgaacaagacactcattgaattttcactctcccaaggtgtttac-aattgtttcccaactctagaat 103  Q
    |||||||||||| ||||| ||||||||  || |||||||||| ||||| |||  |||||||| |||||| ||||| | ||||||||||||||||||||||    
T  25073599 ctaatttctacc-attttttcaatctcctcccatgaacaagatactcaatga--tttcactcacccaagatgtttcccaattgtttcccaactctagaat 25073503  T
Q  104 ctaacccccaaaagagaaccaaccctcttagtctttgatttcctaagg 151  Q
    |||||||||||||||||| |||||  ||||| |||| |||||||||||    
T  25073502 ctaacccccaaaagagaatcaacc--cttagcctttaatttcctaagg 25073457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 59 - 202
Target Start/End: Original strand, 5740978 - 5741120
Alignment:
Q  59 tttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttc 157  Q
    |||||||| || ||||||||| | |||||||| |||||| ||||||||||||||| |||   ||||||||||  ||| ||||||||| ||||||||||||    
T  5740978 tttcactcaccgaaggtgttttccaattgttttccaactttagaatctaaccccccaaaagtaaccaaccct--tagcctttgatttactaaggatcttc 5741075  T
Q  158 tcttttggtttcacaagacttacccaagttgctcacaaatgactc 202  Q
     ||||| ||||| ||||| | |||||| ||||||||||| |||||    
T  5741076 actttttgtttctcaagattcacccaaattgctcacaaaagactc 5741120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 3039039 - 3039127
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| ||| || |||||||||| | |||||||||||||| |||||||||||    
T  3039039 cctaatttctaccaattttcccaatctcaccaatgaacaagacattcaatg-attttcactcactcaaggtgtttacaa-tgtttcccaac 3039127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 4045454 - 4045364
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    ||||||||||||| |||||| ||||||| ||||| ||||||||||||| ||| ||||||||| ||| |||||||||||| |||||||||||||    
T  4045454 cctaatttctacc-attttcccaatctctccaataaacaagacactcaatga-ttttcactcaccctaggtgtttacaaatgtttcccaactc 4045364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 2171667 - 2171754
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  2171667 cctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 2171754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 5406336 - 5406422
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  5406336 cctaatttctacc-attttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 5406422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 5410661 - 5410747
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  5410661 cctaatttctacc-attttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 5410747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 21588963 - 21588915
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcat 53  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21588963 cctaatttctacccattttcccaatctcaccaatgaacaagacactcat 21588915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 33211323 - 33211409
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||| |||||| ||||||||||||||||||| ||||||| || ||||||| |  |||||||||||||||| |||||||||||    
T  33211323 taatttctaccaattttcccaatctcaccaatgaacaaaacactcaatg-attttcagtgacccaaggtgtttacaa-tgtttcccaac 33211409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 17758055 - 17757994
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactct 67  Q
    |||||||||||||||||||| ||||||||| |||||| |||||||||| ||||||||||||||    
T  17758055 cctaatttctacccattttcccaatctcacaaatgaagaagacactca-tgaattttcactct 17757994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 16452465 - 16452543
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  16452465 cctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaat 16452543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 33160504 - 33160577
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| |||||||||||||||| |||||||||| ||| |||||||||  ||||||||||||||| |||||||||||    
T  33160504 ttttcccaatctcaccaatgaataagacactcaatgatttttcactc-accaaggtgtttacaa-tgtttcccaac 33160577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 5413530 - 5413616
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||| || ||||||||||  |||| |||||||||| |||||||||||    
T  5413530 cctaatttctacct-ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaatgtgtttacaa-tgtttcccaac 5413616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 196
Target Start/End: Complemental strand, 11660574 - 11660452
Alignment:
Q  71 aaggtgtttacaa-ttgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttc 169  Q
    ||||||||||||| |||||||| |||||||||||||||||||  |||  |||||||||  ||||| |||||| |||||| || | | |||||||||| ||    
T  11660574 aaggtgtttacaaattgtttccgaactctagaatctaacccc--aaaatgaaccaacc--cttagcctttgaattcctatggttatcctcttttggtctc 11660479  T
Q  170 acaagacttacccaagttgctcacaaa 196  Q
     ||||| | | |||| |||||||||||    
T  11660478 ccaagattcatccaaattgctcacaaa 11660452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 30834672 - 30834750
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| || ||||||||||  || |||||||||||||    
T  30834672 cctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accgaggtgtttacaat 30834750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 31404811 - 31404887
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||||||| |||||| |||||||||  |||||||||||||||| || ||||||||||  ||||||||||||||||    
T  31404811 cctaatttctacc-attttcccaatctcactgatgaacaagacactcaatg-attttcactc-accaaggtgtttacaat 31404887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 179 - 225
Target Start/End: Complemental strand, 26800631 - 26800585
Alignment:
Q  179 acccaagttgctcacaaatgactctccactcatgtgtttcccatccc 225  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||    
T  26800631 acccaagttgctctcaatagactctccactcatgtgtttcccatccc 26800585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 26954437 - 26954509
Alignment:
Q  21 tttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||| |||||||||  |||||||||||||||| || |||||||||| || ||||||||||||| |||||||||||    
T  26954437 tttcccaatctcacatatgaacaagacactcaatg-attttcactccccaaaggtgtttacaa-tgtttcccaac 26954509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 33
Target Start/End: Complemental strand, 16569068 - 16569037
Alignment:
Q  2 aaacctaatttctacccattttctcaatctca 33  Q
    ||||||||||||||||||||||||||||||||    
T  16569068 aaacctaatttctacccattttctcaatctca 16569037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 25073076 - 25072996
Alignment:
Q  148 aaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttcccatccctatg 229  Q
    |||||||||||||||||||||| |||||| || ||||||| | || ||| ||||||||  | |||||||||| | |||||||    
T  25073076 aaggatcttctcttttggtttcccaagacctatccaagtttcacataaa-gactctcctttgatgtgtttccaaaccctatg 25072996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 164; Significance: 9e-88; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 40147293 - 40147080
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   |||| |||||||||||||||||||||||||||||||||||||||||||    
T  40147293 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--atttccactctcccaaggtgtttacaattgtttcccaactctagaatc 40147196  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  40147195 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 40147098  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  40147097 ccactcatgtgtttccca 40147080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 213497 - 213288
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  213497 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 213400  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||      ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  213399 taacccccaaaagagaacc------cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 213306  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  213305 ccactcatgtgtttccca 213288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 5058079 - 5057870
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  5058079 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactcttccaaggtgtttacaattgttttccaactctagaatc 5057982  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttga-tttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||| ||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  5057981 taacccccaaaagagaaccaacc--cttagcctttgattttactaaggatcttctcttttggtttcacaagactcgcccaagttgctcacaaatgactct 5057884  T
Q  204 ccactcatgtgttt 217  Q
    ||||||||||||||    
T  5057883 ccactcatgtgttt 5057870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 38747037 - 38746824
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||  ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  38747037 cctaatttctacccattttcccaatctcattaatgaacaagatactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 38746940  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| ||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  38746939 taacccccaaaagagaaccaacc--cttagcctttgatttcaataaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactct 38746842  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||| ||||||||||    
T  38746841 ccactcacgtgtttccca 38746824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 27015563 - 27015351
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||| |||||| ||||||||||||||| ||| ||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27015563 cctaatttctacctattttcccaatctcaccaatgaccaa-acactcatg--attttcactctcccaagatgtttacaattgtttcccaactctagaatc 27015467  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  27015466 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggttttacaagactcacccaagttgctcacaaaagactct 27015369  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  27015368 ccactcatgtgtttccca 27015351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 219
Target Start/End: Original strand, 27637749 - 27637963
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||| |||    
T  27637749 cctaatttctacccattttctcaatctcaccaatgaacaagacactcat-gaattttcactcttccaaggtgttcacaattgtttcccaactctagcatc 27637847  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatct--tctcttttggtttcacaagacttacccaagttgctcacaaatgact 201  Q
    |||||||||||||||||| ||  || ||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||||||||||| ||| ||||    
T  27637848 taacccccaaaagagaacaaa--cttttagtctttgatttcactaaggatcttctctcttttggtttcacaagactcacccaagttgctcataaaagact 27637945  T
Q  202 ctccactcatgtgtttcc 219  Q
    || |||||||||||||||    
T  27637946 cttcactcatgtgtttcc 27637963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 221
Target Start/End: Complemental strand, 28278346 - 28278135
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28278346 taatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaatgtgtttacaattgtttcccaactctagaatcta 28278249  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    ||||| |||||||| ||||||  |||||  ||||||||| ||||  ||||||||||||| |||||||||||| |||||||||||||||||  | ||||||    
T  28278248 acccctaaaagagagccaacc--cttagcatttgatttcactaacaatcttctcttttgatttcacaagactcacccaagttgctcacaatagtctctcc 28278151  T
Q  206 actcatgtgtttccca 221  Q
    ||||||||||||||||    
T  28278150 actcatgtgtttccca 28278135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 201
Target Start/End: Original strand, 16641091 - 16641269
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagag 119  Q
    ||||||||||||| ||||||||||||||||| | ||||||| ||||| | |||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  16641091 ttttctcaatctcgccaatgaacaagacacttaatgaattt-cactcactcaaggtgtttacaaatgttccccaactctagaatctaatccccaaaagag 16641189  T
Q  120 aaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgact 201  Q
    ||||||||   |||| |||||||||  |||| |||||||||||||||||||||||||| ||| |||||| |||||| |||||    
T  16641190 aaccaacc--tttagcctttgattttttaagtatcttctcttttggtttcacaagactcaccaaagttgttcacaattgact 16641269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 59 - 229
Target Start/End: Complemental strand, 4160611 - 4160445
Alignment:
Q  59 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttct 158  Q
    ||||||||  |||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||  ||| |||| ||| ||||||||||||||    
T  4160611 tttcactcaaccaatgtgtttacaattgtttctcaactct-gaatctaacccccaaaagagaaccaaccct--tagcctttaattacctaaggatcttct 4160515  T
Q  159 cttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttcccatccctatg 229  Q
    ||||||||||| ||||| | |||| ||||||||||||||||||||||||| | ||| |||||| |||||||    
T  4160514 cttttggtttcccaagattcaccctagttgctcacaaatgactctccacttacgtg-ttcccaaccctatg 4160445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 42426371 - 42426458
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||||||    
T  42426371 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaat-aattttcactcacccaaggtgtttacaa-tgtttcccaa 42426458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 14689622 - 14689759
Alignment:
Q  81 caattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttac 180  Q
    |||||||||| ||||||||||||||| |||| ||||||||||||||||   ||| ||||||||| ||||||||||| ||||||||| || |||||||||     
T  14689622 caattgtttcacaactctagaatctatcccc-aaaagagaaccaacccc--tagcctttgattttctaaggatcttttcttttggtgtcccaagacttat 14689718  T
Q  181 ccaagttgctcacaaatgactctccactcatgtgtttcccat 222  Q
    | ||||||||||||||| |||||||  | |||||||||||||    
T  14689719 ctaagttgctcacaaat-actctccttttatgtgtttcccat 14689759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8566078 - 8566160
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||    
T  8566078 caaacctaagttctacccattttctcaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 8566160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 533801 - 533713
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || || |||||||||| |||||||||||||||| |||||||||||    
T  533801 cctaatttctacccattttcccaatctcaccaatgaacaagacacgcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 533713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 28750791 - 28750879
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||| ||| |||||||||||    
T  28750791 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgttttcaa-tgtttcccaac 28750879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 19806417 - 19806328
Alignment:
Q  3 aacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||| |||||||||||    
T  19806417 aacctaatttctacccatttttccaatctcaccaatgaacaagacactcaatga--tttcactcacccaaggtgtttacaa-tgtttcccaac 19806328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 42428568 - 42428644
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  42428568 taatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 42428644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 13488235 - 13488157
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| | ||||||||||| |||||||||||||||||    
T  13488235 cctaatttctacccattttcccaatcttaccaatgaacaagacactcaat-aattttcactcacccaaggtgtttacaat 13488157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 5887548 - 5887640
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||||| ||| || |||||||||| |||||||||||||||| |||||||||||    
T  5887548 caaatctaatttctatccattttctcaatctcacaaatgaacaagacattcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 5887640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 39468685 - 39468773
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| | |||||||||||||| |||||||||||    
T  39468685 cctaatttctacccattttcccaatctcactaatgaacaagacactcaatg-attttcactcactcaaggtgtttacaa-tgtttcccaac 39468773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 316720 - 316585
Alignment:
Q  81 caattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttac 180  Q
    ||||||||| |||||| || |||||||||||||||||||||||||||  ||||| |||||||||||| ||||| |||||||||||| || ||||| ||      
T  316720 caattgttttccaactttaaaatctaacccccaaaagagaaccaacc--cttagcctttgatttcct-aggattttctcttttggtctcccaaga-ttca 316625  T
Q  181 ccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    |||||||||||||||| |||||||   | ||||||||||||    
T  316624 ccaagttgctcacaaa-gactctcttttgatgtgtttccca 316585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Complemental strand, 32636854 - 32636778
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||| |||||||||||||||| |||||||||| || |||||||||| |||||||||||||||||    
T  32636854 taatttctacccattttcccaatctcaccaatgaataagacactcaatg-attttcactcacccaaggtgtttacaat 32636778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 35616205 - 35616023
Alignment:
Q  1 caaacctaatttctacccattttctcaatctca-ccaatgaacaagacactcattgaattttcactctcccaaggtgtttac-aattgtttcccaactct 98  Q
    |||||||||||||||| ||||| |||||||||  ||  ||||||||| ||||| |||  |||||||| |||||||||||| | |||||||||| ||||||    
T  35616205 caaacctaatttctactcattt-ctcaatctcttcccgtgaacaagagactcaatga--tttcactcacccaaggtgtttcctaattgtttccaaactct 35616109  T
Q  99 agaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttg 188  Q
    ||||||||||| | ||||||||| |||| ||   || |||||||||| | | ||||||| ||||||||||| ||||||| ||| ||||||    
T  35616108 agaatctaaccac-aaaagagaatcaactct---agcctttgatttcttgatgatcttcgcttttggtttcccaagactcaccaaagttg 35616023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 229
Target Start/End: Original strand, 21205873 - 21206009
Alignment:
Q  91 ccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgct 190  Q
    ||||||| | |||||||||| |||||||||||||| |||  |||||||||||||| ||||| ||||| ||||| |||||  || | | |||||| || ||    
T  21205873 ccaactccataatctaaccctcaaaagagaaccaatcct--tagtctttgatttcataaggttcttcacttttagtttcctaaaattcacccaaatttct 21205970  T
Q  191 cacaaatgactctccactcatgtgtttcccatccctatg 229  Q
     |||||||||||  ||||||||||||||||| |||||||    
T  21205971 gacaaatgactcctcactcatgtgtttcccaaccctatg 21206009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 33831716 - 33831634
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||||||  ||||||||| |||||| |||||||||| || |||||||||| |||||||||||||||||    
T  33831716 caaacctaatttctacccatttttccaatctcacaaatgaataagacactcaatg-attttcactcacccaaggtgtttacaat 33831634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3075790 - 3075882
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||| |||||||||||||||| ||||||| ||||||||| || ||||||||||  | ||||||||||||| |||||||||||    
T  3075790 caaacctaatttctacctattttctcaatctcacaaatgaacgagacactcaatg-attttcactcatcaaaggtgtttacaa-tgtttcccaac 3075882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 31183004 - 31182917
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| || ||||||||||||| |||||||||||    
T  31183004 cctaatttctacccattttc-caatctcacaaatgaacaagacactcaatg-attttcactcacctaaggtgtttacaa-tgtttcccaac 31182917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 33906288 - 33906350
Alignment:
Q  131 ttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcac 193  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  33906288 ttagcctttgatttcctaaggatcttctcttttggtttcccaagactcacccaagttgctcac 33906350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 538055 - 537970
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||||||||| ||||||||| |||||||||||||| || || |||||||||| |||||||||||||| | ||||||||||    
T  538055 taatttctacccattttcccaatctcactaatgaacaagacacgcaatg-attttcactcacccaaggtgtttacga-tgtttcccaa 537970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 25412792 - 25412706
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  25412792 cctaatttctaccc-ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 25412706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 13343093 - 13343005
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  13343093 cctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 13343005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 30683057 - 30683134
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  30683057 cctaatttctaccctttttcccaatctcacaaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaat 30683134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 13239783 - 13239696
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||  ||||  ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  13239783 cctaatttctaccattttttccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 13239696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 30182620 - 30182533
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||| ||| |||||||||||    
T  30182620 cctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttgcaa-tgtttcccaac 30182533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 42926904 - 42926838
Alignment:
Q  26 caatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||| |||||||||||||| ||| ||||||||| |||||||||||||||| ||||||||||    
T  42926904 caatctcaccaaagaacaagacactcaatga-ttttcactcacccaaggtgtttacaa-tgtttcccaa 42926838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 164
Target Start/End: Complemental strand, 8019557 - 8019464
Alignment:
Q  68 cccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttg 164  Q
    |||||||||||| | |||| |||||||||| ||||||||||||||||||| | |||||||   ||||| ||||||||| |||||||||||| ||||||    
T  8019557 cccaaggtgtttcctaattatttcccaactatagaatctaacccccaaaa-ataaccaac---cttagcctttgattttctaaggatcttcacttttg 8019464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 16452116 - 16452035
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||| |||||||||||||||||  |||||||| |||||||||||||||||| || ||| ||||| | ||||||||||||||||    
T  16452116 caaacttaatttctacccatttttccaatctcatcaatgaacaagacactcaatg-attgtcact-taccaaggtgtttacaat 16452035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 36074196 - 36074268
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  36074196 ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 36074268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 84
Target Start/End: Original strand, 42310075 - 42310149
Alignment:
Q  9 atttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| || |||||||||  |||||  ||||||||||    
T  42310075 atttctacccaatttctcaatctcaccaatgagcaagacactcaatg-attttcacttacccaaaatgtttacaat 42310149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 9049490 - 9049565
Alignment:
Q  18 cattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    ||||||| ||| ||||| ||| ||||||||||||| || ||||| |||| ||||| |||||||||| ||||||||||    
T  9049490 cattttcccaaactcactaatcaacaagacactcagtg-atttttactcacccaaagtgtttacaaatgtttcccaa 9049565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Complemental strand, 37439144 - 37439078
Alignment:
Q  26 caatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||| |||||||||| || ||||||||||  |||| |||||||||| |||||||||||    
T  37439144 caatctcaccaatgaataagacactcaatg-attttcactc-accaaagtgtttacaa-tgtttcccaac 37439078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 13695828 - 13695910
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgttt 89  Q
    |||||||| ||||| ||||| ||||||| |||| ||| |||| ||||| ||| ||||||||| | |||||||||||||| |||||    
T  13695828 cctaatttgtaccc-ttttcccaatctctccaaagaaaaagatactcaatga-ttttcactcacacaaggtgtttacaaatgttt 13695910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 164; Significance: 9e-88; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 11348730 - 11348521
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11348730 cctaatttctaccaattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 11348633  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  11348632 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 11348535  T
Q  204 ccactcatgtgttt 217  Q
    ||||||||||||||    
T  11348534 ccactcatgtgttt 11348521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 37033209 - 37033422
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37033209 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 37033306  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||| ||||||||||||||||   ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37033307 taaccccaaaaagagaaccaaccca--tagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactct 37033404  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  37033405 ccactcatgtgtttccca 37033422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 34603608 - 34603399
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34603608 cctaatttctacccattttttcaatctcaccaatgaacaagacactcat-gaattttcactttcccaaggtgtttacaattgtttcccaactctagaatc 34603510  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    ||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |     
T  34603509 taacctccaaaagagaaccaaccct--tagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactttt 34603412  T
Q  205 cactcatgtgttt 217  Q
    |||||||||||||    
T  34603411 cactcatgtgttt 34603399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 7482367 - 7482579
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||| | ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  7482367 cctaatttctacccatttacccaatctcaccaatgaacaatacactcat-gaattttcactttcccaaggtgtttacaattgcttcccaactctagaatc 7482465  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    |||||||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||    
T  7482466 taacccccaaaagagaaccaaccct--tag-ctttgatttcctaaggatcttctctttttgtttcacaagactcacccaagttgctcacaaaagactctc 7482562  T
Q  205 cactcatgtgtttccca 221  Q
    |||||||||||||||||    
T  7482563 cactcatgtgtttccca 7482579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 193643 - 193430
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||| |||||||||||||||||||||||||||||||||||||||    
T  193643 cctaatttctacccattttctcaatctcaccaatgaacaagacactcatg--attttcaccctcccaaggtgtttacaattgtttcccaactctagaatc 193546  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||    
T  193545 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcatccaagttgctcacaaaagactct 193448  T
Q  204 ccactcatgtgtttccca 221  Q
     ||| |||||||||||||    
T  193447 tcacacatgtgtttccca 193430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 37879047 - 37879260
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37879047 cctaatttctacctattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 37879144  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||||||| |  ||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||    
T  37879145 taacccccaaaagagaaccaatc--cttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaaagactct 37879242  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  37879243 ccactcatgtgtttccca 37879260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 13547225 - 13547434
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||    
T  13547225 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaaatctagaatc 13547322  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  13547323 taacccccaaaagagaaccaacc--cttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaagactct 13547420  T
Q  204 ccactcatgtgttt 217  Q
    ||||||||||||||    
T  13547421 ccactcatgtgttt 13547434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 13549136 - 13549345
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||||||    
T  13549136 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaaatctagaatc 13549233  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  13549234 taacccccaaaagagaaccaacc--cttagcctttgatttcactaagtatcttctcttttggtttcacaagattcacccaagttgctcacaaaagactct 13549331  T
Q  204 ccactcatgtgttt 217  Q
    ||||||||||||||    
T  13549332 ccactcatgtgttt 13549345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 37168329 - 37168116
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||    
T  37168329 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctctcaaggtgtttacaattgtttcccaactctagaatc 37168232  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||| ||||| |  ||| |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||    
T  37168231 taacccccaaaagagaatcaacctt--tagcctttgatttcactaaggatcttctcttttagtttcacaagactcacccaagttgctcacaaaagactct 37168134  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  37168133 ccactcatgtgtttccca 37168116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 42298111 - 42298324
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||   ||||| |||||||||||||||||||||||||||| |||||||||||||    
T  42298111 cctaatttctaccaattttcccaatctcaccaatgaacaagacactcatg--atttttactctcccaaggtgtttacaattgtttcacaactctagaatc 42298208  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||||||||  |||||| |||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  42298209 taacccccaaaagagaaccaac--tcttagcctttgatttcacttaggatcttctcttttggtttcacaagactcacccaagttgctcgcaaatgactct 42298306  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  42298307 ccactcatgtgtttccca 42298324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 47115203 - 47114990
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47115203 cctaatttctaccaattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaagatgtttacaattgtttcccaactctagaatc 47115106  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| ||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  47115105 taacccccaaaagagaaccaacc--cttagcctttgatttcattaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 47115008  T
Q  204 ccactcatgtgtttccca 221  Q
    ||| ||||||||||||||    
T  47115007 ccattcatgtgtttccca 47114990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 5 - 219
Target Start/End: Complemental strand, 29136279 - 29136068
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||| |||||||||||||    
T  29136279 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcacaactctagaatc 29136182  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||| ||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||    
T  29136181 taacccccaaaagagaactaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaaaactct 29136084  T
Q  204 ccactcatgtgtttcc 219  Q
    |||||||||| |||||    
T  29136083 ccactcatgtttttcc 29136068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 47255476 - 47255688
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||   ||||||||||||||||||  ||||||||| ||||||||||||||||||    
T  47255476 cctaatttctacccatttttccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggcatttacaattatttcccaactctagaatc 47255573  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||| | | |||||||||||||| ||||||    
T  47255574 taacccccaaaagagaaccaacc--cttagtctttgatttcactaaggatcttctcttttggtttcacaagactca-ctaagttgctcacaaaagactct 47255670  T
Q  204 ccactcatgtgtttccca 221  Q
    ||| ||||||||||||||    
T  47255671 ccaatcatgtgtttccca 47255688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 19752718 - 19752504
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaat 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||| |||||||||||| ||| |||||||||||||||||    
T  19752718 cctaatttctacccattttactcaatctcaccaatgaacaagacactcatg--attttcactctctcaaggtgtttacgattatttcccaactctagaat 19752621  T
Q  104 ctaacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactc 202  Q
    |||||||||||||||||||||| |   |||| |||||||||| |||||||||||||||||||||||||||||||| | | ||||||||||||||  ||||    
T  19752620 ctaacccccaaaagagaaccaatc--attagcctttgatttcactaaggatcttctcttttggtttcacaagactcatctaagttgctcacaaaatactc 19752523  T
Q  203 tccactcatgtgtttccca 221  Q
    |||||||||||||||||||    
T  19752522 tccactcatgtgtttccca 19752504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 19754527 - 19754310
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaat 103  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||| |||||||||||| | |||||||||||||||||||    
T  19754527 cctaatttctacccatttttctcaatctcaccaatgaacaagacactcatg--attttcactctctcaaggtgtttacgaatgtttcccaactctagaat 19754430  T
Q  104 ctaacccccaaaagagaaccaaccctcttagtctttgatttc----ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatga 199  Q
    ||||||||||||||||||||||||   |||  ||||||||||     ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||    
T  19754429 ctaacccccaaaagagaaccaacc--attatcctttgatttcacttataaggattttctcttttggtttcacaagactcacccaagttgctcacaaaaga 19754332  T
Q  200 ctctccactcatgtgtttccca 221  Q
    ||||||||||||||||||||||    
T  19754331 ctctccactcatgtgtttccca 19754310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 31925843 - 31926055
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||  || |||||||||||||||||||||||||   ||||||||||||||||||||||||||| || |||| ||||||||||||    
T  31925843 cctaatttctacccatttttccactctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaactgcttcc-aactctagaatc 31925939  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| || |||    
T  31925940 taacccccaaaagagaaccaaccat--tagcctttgatttcactaaggatcttctcttttggtttcacaagtctcacccaagttgctcacaaaagattct 31926037  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||| ||||||||||    
T  31926038 ccactcacgtgtttccca 31926055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 41 - 221
Target Start/End: Complemental strand, 28242385 - 28242207
Alignment:
Q  41 acaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttg 140  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||   ||| |||||    
T  28242385 acaagacactcaa-gaattttcactctcccaaggtgtttacaattgttttccaactctagaatctaacccctaaaagagaaccaaccca--tagcctttg 28242289  T
Q  141 atttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28242288 atttcactaaggatattctcttttggtttcacaagactcacccaagttgctcacaaatgactctccactcatgtgtttccca 28242207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 88 - 217
Target Start/End: Original strand, 34602557 - 34602684
Alignment:
Q  88 ttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagtt 187  Q
    |||||||||||||||||||||| |||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34602557 ttcccaactctagaatctaacctccaaaagagaaccaaccct--tagcctttgatttcctaaggatcttctcttttggtttcacaagactcacccaagtt 34602654  T
Q  188 gctcacaaatgactctccactcatgtgttt 217  Q
    ||||||||| |||| | |||||||||||||    
T  34602655 gctcacaaaagacttttcactcatgtgttt 34602684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 217
Target Start/End: Complemental strand, 6808446 - 6808270
Alignment:
Q  37 atgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtc 136  Q
    |||||||||||||||| | ||||||||||||||||| |||||| | | |||||| |||||||||||||||||| | ||| ||||||||||| ||   |||    
T  6808446 atgaacaagacactcaat-aattttcactctcccaaagtgtttcccaatgtttctcaactctagaatctaacctcgaaa-gagaaccaaccttcc--gtc 6808351  T
Q  137 tttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgttt 217  Q
    ||||||| | ||| ||||||||||||||||||  ||  ||| |||| |||||||||||||||||||| || ||||||||||    
T  6808350 tttgattacataatgatcttctcttttggttttccattactcaccctagttgctcacaaatgactcttcattcatgtgttt 6808270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 221
Target Start/End: Complemental strand, 41135818 - 41135640
Alignment:
Q  39 gaacaagacactcattgaattttcactctcccaaggtgttta-caattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtct 137  Q
    |||||||| ||||| |||  |||| ||| ||||||||||||  ||| |||||| |||||||||||||||||||||||||||||||||| |  ||||| ||    
T  41135818 gaacaagagactcaatga--tttccctcacccaaggtgtttttcaaatgtttctcaactctagaatctaacccccaaaagagaaccaatc--cttagcct 41135723  T
Q  138 ttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    || |||||| || |||||||||||||||||||  |||||| ||||||||| |||||||| ||||||||  | ||||||||||||    
T  41135722 ttaatttccaaatgatcttctcttttggtttcctaagactcacccaagtttctcacaaa-gactctcctttgatgtgtttccca 41135640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4552769 - 4552851
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||||    
T  4552769 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttccctcacccaaggtgtttacaat 4552851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 1833554 - 1833467
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||    
T  1833554 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaa 1833467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 197044 - 197132
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  197044 cctaatttctaccaattttctcaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 197132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 3847257 - 3847345
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  3847257 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 3847345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 221
Target Start/End: Complemental strand, 22079278 - 22079142
Alignment:
Q  81 caattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttac 180  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |   ||||| |||||||||| |||| ||||| | |||||||||  ||||||| ||    
T  22079278 caattgtttctcaactctagaatctaacccccaaaagagaacaatc---cttagcctttgatttcataagcatcttatattttggtttgccaagactcac 22079182  T
Q  181 ccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    | |||||||||||||| ||||||||  | ||||||||||||    
T  22079181 ctaagttgctcacaaa-gactctcccttgatgtgtttccca 22079142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 44455192 - 44455104
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||| |||||||||||    
T  44455192 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-gttttcactcacccaaggtgtttacaa-tgtttcccaac 44455104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 79
Target Start/End: Complemental strand, 49918382 - 49918309
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgttt 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  49918382 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgttt 49918309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 10925253 - 10925167
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  10925253 taatttctatccattttttcaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 10925167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 8550919 - 8551001
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| ||||| |||||||||||    
T  8550919 caaacctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaatgtgtttacaat 8551001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 31659270 - 31659192
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  31659270 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 31659192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 37503690 - 37503768
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  37503690 cctaatttttacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 37503768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41360950 - 41360859
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||| |||||| ||||||| | |||||||||||    
T  41360950 caaacctaatttctacccattttcccaatctcaccaatgaacaagacactcaat--attttcactcacccaagatgtttacga-tgtttcccaac 41360859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 203
Target Start/End: Complemental strand, 25652053 - 25651922
Alignment:
Q  71 aaggtgtttacaattgtttcccaactctagaatctaaccccc-aaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttc 169  Q
    |||||||||||||||||||||||||||||||||||| |  |  |||||||||||||   ||||| | |||||||| |||||||||||| |||||| ||||    
T  25652053 aaggtgtttacaattgtttcccaactctagaatctaccttcataaaagagaaccaat--tcttaatatttgattttctaaggatcttcacttttgctttc 25651956  T
Q  170 acaagacttacccaagttgctcacaaatgactct 203  Q
     ||||| | |||||||||||||||| || |||||    
T  25651955 ccaagattcacccaagttgctcacatataactct 25651922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 28265690 - 28265778
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| ||||||| ||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  28265690 cctaatttctacctattttcccaatctcgccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 28265778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 50167311 - 50167399
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||  |||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  50167311 cctaatttctactaattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 50167399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 50169346 - 50169434
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||| ||||||| |||||||||||    
T  50169346 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtatttacaa-tgtttcccaac 50169434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 4 - 93
Target Start/End: Original strand, 13138110 - 13138196
Alignment:
Q  4 acctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttccca 93  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||    
T  13138110 acctaatttctatccatttt-tcaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttccca 13138196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 28223559 - 28223645
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||| | ||| |||||||||||    
T  28223559 taatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtcttcaa-tgtttcccaac 28223645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 3156897 - 3156820
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||  ||| ||||||||||||    
T  3156897 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcactc-accagggtgtttacaat 3156820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 46064954 - 46064872
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||| || |||||||| ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||    
T  46064954 caaacctaatttttatccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 46064872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 834303 - 834391
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||| || |||||||| | |||||||||||||||| |||||||||||    
T  834303 cctaatttctatccattttcccaatctcacaaatgaacaagacactcaatg-attttcacgcacccaaggtgtttacaa-tgtttcccaac 834391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 2 - 84
Target Start/End: Original strand, 45644488 - 45644569
Alignment:
Q  2 aaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||| | || |||||||||| |||||| ||||||||||    
T  45644488 aaacttaatttctatccattttctcaatctcaccaatgaacaagacacttaatg-attttcactcacccaagatgtttacaat 45644569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 15820343 - 15820249
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    |||||||||||| ||||||| ||  |||| ||||||| |||||||||||||| || |||||||||| |||||||||||||||| |||||||||||||    
T  15820343 caaacctaatttttacccatctttccaatatcaccaaagaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaactc 15820249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 28220362 - 28220440
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||| || |||||||||| |||||||||||| ||||    
T  28220362 cctaatttctacccattttccgaatctcaccaatgaataagacactcaatg-attttcactcacccaaggtgttttcaat 28220440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 928113 - 928202
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||| |  ||||  |||| ||||||| |||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||    
T  928113 cctaatttctatcattttttccaatatcaccaaagaacaagacactcattga-ttttcactcacccaaggtgtttacaaatgtttcccaac 928202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 23555401 - 23555489
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||  |||||||||||| ||| |||||||||| | |||||||| || |||||||||||||||| |||||||||||    
T  23555401 cctaatttctacccatttttccaatctcaccaaagaataagacactcaat-aattttcattcacccaaggtgtttacaa-tgtttcccaac 23555489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 37560006 - 37560083
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| || |||||||||| || || |||||||||||    
T  37560006 ctaatttctacccattttcctaatctcaccaatgaacaagacactcaatg-attttcactcacctaatgtgtttacaat 37560083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 44650314 - 44650389
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaact 96  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||| ||||| |||||||||| ||||| ||||||    
T  44650314 ttttctcaatctctccaatgaacaagacactcaat-aattttcactcacccaaagtgtttacaaatgttttccaact 44650389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 13659472 - 13659550
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||||||| || |||||||||  |||||||||||||||||    
T  13659472 cctaatttctatccgttttcccaatctcacaaatgaacaagacactcaatg-attttcactaccccaaggtgtttacaat 13659550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 20762704 - 20762616
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| |||| ||||||||||||||||||||||| ||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  20762704 cctaatttctacccttttttctcaatctcaccaatgaacaagatactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 20762616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 3189362 - 3189275
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  3189362 cctaatttataccctttttccaaatctcaccaatgaacaagacactcagtg-attttcactc-accaaggtgtttacaa-tgtttcccaac 3189275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 3198179 - 3198092
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  3198179 cctaatttataccctttttccaaatctcaccaatgaacaagacactcagtg-attttcactc-accaaggtgtttacaa-tgtttcccaac 3198092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 3207018 - 3206931
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  3207018 cctaatttataccctttttccaaatctcaccaatgaacaagacactcagtg-attttcactc-accaaggtgtttacaa-tgtttcccaac 3206931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 40122330 - 40122421
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||| |||||||| |||||||||  ||||||||| ||||||||||||| ||| || ||||| |||| |||||||||||||||| ||||||||||    
T  40122330 caaatctaatttcgacccatttttccaatctcacaaatgaacaagacattcaatg-atttttactcacccaaggtgtttacaa-tgtttcccaa 40122421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 3331505 - 3331428
Alignment:
Q  85 tgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggt 166  Q
    |||||||||||||||||||| |||||| |||||| ||| ||||||  ||| |||||||||||||||||||| ||||||||||    
T  3331505 tgtttcccaactctagaatccaacccc-aaaaga-aacaaaccct--tagcctttgatttcctaaggatctcctcttttggt 3331428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 16455653 - 16455585
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggt 75  Q
    |||||||||  |||||||  ||||||||||||||||||||||||||| || |||||||||| ||||||||    
T  16455653 ctaatttctcaccattttaccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggt 16455585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 12318720 - 12318801
Alignment:
Q  109 ccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctca 192  Q
    |||| ||||||||||||||||  ||| ||||||||||| || ||| |||| ||||||| || ||||||| ||||||||||||||    
T  12318720 cccccaaagagaaccaaccct--tagcctttgatttccaaaagattttctattttggtctcccaagactcacccaagttgctca 12318801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 30476582 - 30476672
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaa---tgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| ||||||||||||   ||||||||| ||||| || |||||||| | |||||||||||||||| |||||||||||    
T  30476582 cctaatttctacctattttcccaatctcaccaatattgaacaaga-actcaatg-attttcacccacccaaggtgtttacaa-tgtttcccaac 30476672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 155
Target Start/End: Complemental strand, 10157571 - 10157501
Alignment:
Q  82 aattgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatct 155  Q
    ||||||||  ||||| ||||||||||||||| |||  |||||||||||  ||||||||||||||||||||||||    
T  10157571 aattgtttttcaactttagaatctaaccccctaaat-gaaccaaccct--tagtctttgatttcctaaggatct 10157501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 9109660 - 9109733
Alignment:
Q  131 ttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    ||||||||||||| ||| | |||||||| ||||| |||| ||||||| | |||| ||||||||||| |||||||    
T  9109660 ttagtctttgattacctcatgatcttctattttgatttcccaagactcatccaaattgctcacaaaagactctc 9109733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 44646935 - 44647010
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaact 96  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||||  |||| || ||||||| | ||| ||||||    
T  44646935 ttttctcaatctctccaatgaacaagacactcaat-aattttcactcatccaaagtatttacaaatattttccaact 44647010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 6068505 - 6068471
Alignment:
Q  128 ctcttagtctttgatttcctaaggatcttctcttt 162  Q
    ||||||| |||||||||||||||||||||||||||    
T  6068505 ctcttagcctttgatttcctaaggatcttctcttt 6068471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 217
Target Start/End: Original strand, 4535783 - 4535819
Alignment:
Q  181 ccaagttgctcacaaatgactctccactcatgtgttt 217  Q
    |||||||||||||||| |||| |||||||||||||||    
T  4535783 ccaagttgctcacaaacgactatccactcatgtgttt 4535819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 34310852 - 34311069
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34310852 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattatttcccaactctagaatc 34310949  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||||||||| |  ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  34310950 taacccccaaaagagaaccaacctt--tagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 34311047  T
Q  204 ccactcatgtgtttcccatccc 225  Q
    |||||||||||||| |||||||    
T  34311048 ccactcatgtgttttccatccc 34311069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 3259027 - 3258811
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3259027 cctagtttctacccattttcccaatctcaccaatgaacaagacactcat-gaattttcactttcccaaggtgtttacaattgtttcccaactctagaatc 3258929  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    ||||||||||| |||||||||||||  |||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| |||||||    
T  3258928 taacccccaaatgagaaccaaccct--tagg-tttgatttcctaaggatcttctcttttggtttcacaagactcacccaagttgctaataaaagactctc 3258832  T
Q  205 cactcatgtgtttcccatccc 225  Q
    ||||||| |||||||||||||    
T  3258831 cactcatatgtttcccatccc 3258811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 2361108 - 2361320
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2361108 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 2361205  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||| | |||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||    
T  2361206 taacctc-aaaagagaaccaaccct--tagcctttgatttcactaaggatcttctcttttggtttcataagactcacccaagttgctcacaaaagactct 2361302  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  2361303 ccactcatgtgtttccca 2361320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 29608769 - 29608555
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||    
T  29608769 cctaatttctacccattttcccaatctcaccaaagaacaagacactcat-gaagtttcgctctctcaaggtgtttacaattgtttcccaactctagaatc 29608671  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||||||| ||||||    
T  29608670 taacccccaaaagagaaccaacc--cttagcctttgatttcactaagaatcttctattttggtttcacaagactcacccaagttgctcacaaaagactct 29608573  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  29608572 ccactcatgtgtttccca 29608555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 7 - 219
Target Start/End: Original strand, 4512528 - 4512737
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    ||||||||||||||||||  |||||||||||| |||||| |||||||   ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  4512528 taatttctacccattttccaaatctcaccaatcaacaaggcactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatata 4512625  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    |||||||||||||||| ||||||  ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4512626 acccccaaaagagaactaaccct--tagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaatgactctcc 4512723  T
Q  206 actcatgtgtttcc 219  Q
    ||||||||||||||    
T  4512724 actcatgtgtttcc 4512737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 4508842 - 4509055
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4508842 cctaatttctactcattttcccaatctcaccaatcaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 4508939  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||  ||||||||||||| |||  ||| |||||||||| ||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||    
T  4508940 taacccataaaagagaaccaatcct--tagcctttgatttcactaaggatcttatcttttggtttcacaagactcaccaaagttgctcacaaatgactct 4509037  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  4509038 ccactcatgtgtttccca 4509055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 6432003 - 6431794
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||||||    
T  6432003 cctaatttctacccattttcccaatctaaccaatgaacaagacactcatg--attttcactctcccaatgtgtttacaattgtttcccaactctagaatc 6431906  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||| ||||||||||||||||  |||||  ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  6431905 taaccctcaaaagagaaccaacc--cttagcatttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 6431808  T
Q  204 ccactcatgtgttt 217  Q
     |||||||||||||    
T  6431807 acactcatgtgttt 6431794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 2390314 - 2390105
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||   ||| |||||||||||||||||||| ||   |||||| |||||||||||||||||||||||||||||||||||||||||    
T  2390314 cctaatttctacccatttttcgaatttcaccaatgaacaagacacttatg--attttcgctctcccaaggtgtttacaattgtttcccaactctagaatc 2390217  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |    
T  2390216 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactat 2390119  T
Q  204 ccactcatgtgttt 217  Q
    ||||||||||||||    
T  2390118 ccactcatgtgttt 2390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 22270005 - 22269788
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  22270005 cctaatttctacccattttcccaatctcaccaatgaacaagacactcat-gaattttcactctcccaaggtgtttagaattgtttcc-aactctagaatc 22269908  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||||||||||||||||||||   ||| || ||||||| ||||||||||||| |||||||||||||||||| ||||||||| ||| |||  ||||||    
T  22269907 taacccccaaaagagaaccaaccca--tagcctatgatttcactaaggatcttctattttggtttcacaagactcacccaagtttctctcaatagactct 22269810  T
Q  204 ccactcatgtgtttcccatccc 225  Q
    ||||||||||||||||| ||||    
T  22269809 ccactcatgtgtttcccctccc 22269788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 4510686 - 4510897
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    ||||||||||||||||||  |||||||||||| |||||| |||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4510686 taatttctacccattttccaaatctcaccaatcaacaaggcactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 4510783  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    ||||  ||||||||||||| | |  ||| |||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  4510784 acccataaaagagaaccaatcgt--tagcctttgatttcactaaggatcttctcttttggtttcacaagactcaccaaagttgctcacaaatgactctcc 4510881  T
Q  206 actcatgtgtttccca 221  Q
    ||||||||||||||||    
T  4510882 actcatgtgtttccca 4510897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 5 - 213
Target Start/End: Original strand, 48599470 - 48599675
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||||   ||||||||||  |||||||||||||||||||||||||||||||||||     
T  48599470 cctaatttctacccattttcccaatatcaccaatgaacaagacaatcatg--attttcactcctccaaggtgtttacaattgtttcccaactctagaata 48599567  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  48599568 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 48599665  T
Q  204 ccactcatgt 213  Q
    | ||||||||    
T  48599666 ctactcatgt 48599675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 30 - 217
Target Start/End: Original strand, 6360073 - 6360257
Alignment:
Q  30 ctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaaccaaccct 129  Q
    |||||||||||||||| |||||||   ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||      
T  6360073 ctcaccaatgaacaagtcactcatg--attttcattctcccaaggtgtttaaaattgtttcccaactctagaatctaacccccaaaagagaaccaacc-- 6360168  T
Q  130 cttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgttt 217  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6360169 cttagcctttgatttcactaaggatcttctcttttgatttcacaagactcacccaagttgctcacaaatgactctccactcatgtgttt 6360257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 8359453 - 8359667
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||   |||||||||||| |||||||||||||||||||| ||||||| ||||||    
T  8359453 cctaatttctacccattttcccaatctccccaatgaacaagacactcatg--attttcactctctcaaggtgtttacaattgttttccaactcaagaatc 8359550  T
Q  105 taa-cccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactc 202  Q
    ||| ||||||||| | |||||||  |||||| |||||||||| |||||||| ||||||||||||||||||||||| | |||||||||||||||| |||||    
T  8359551 taaacccccaaaaaataaccaac--tcttagcctttgatttcactaaggattttctcttttggtttcacaagactcatccaagttgctcacaaaagactc 8359648  T
Q  203 tccactcatgtgtttccca 221  Q
    |||||||||||||||||||    
T  8359649 tccactcatgtgtttccca 8359667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 40 - 229
Target Start/End: Original strand, 22328568 - 22328755
Alignment:
Q  40 aacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaccccc-aaaagagaaccaaccctcttagtctt 138  Q
    ||||||||||||| ||| |||||| || | ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||||||  |||  ||    
T  22328568 aacaagacactcaatga-ttttcattccctcaaggtgtttacaattgtttcccaactttaggatctaaccccccaaaagagaaccaaccct--tagcttt 22328664  T
Q  139 tgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttcccatccctatg 229  Q
    ||||| | ||||||| ||||||||| ||||| ||||| | |||||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  22328665 tgattacataaggatattctcttttagtttcccaagattcacccaagttgctcacaaatgactctctactcatgtttttcccaaccctatg 22328755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 47676272 - 47676360
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  47676272 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattg-attttcactcacccaaggtgtttacaa-tgtttcccaac 47676360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 36146545 - 36146633
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  36146545 ctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaaatgtttcccaac 36146633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 47674079 - 47674157
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  47674079 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 47674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 83
Target Start/End: Original strand, 30024868 - 30024945
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaa 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||||    
T  30024868 cctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa 30024945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 31733105 - 31733193
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  31733105 cctaatttctacccattttctcagtctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 31733193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 24526030 - 24526121
Alignment:
Q  2 aaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  24526030 aaacctaatttctacccattttcccaatttcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 24526121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 4538676 - 4538764
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||| |||||||||    
T  4538676 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaatt-tttcccaac 4538764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 4586193 - 4586105
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||| ||||| |||||||||||||||| |||||||||||    
T  4586193 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-atttacactcacccaaggtgtttacaa-tgtttcccaac 4586105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 27347849 - 27347761
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| ||||| |||||||||| |||||||||||    
T  27347849 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaatgtgtttacaa-tgtttcccaac 27347761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 48491611 - 48491523
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| ||||| |||||||||| |||||||||||    
T  48491611 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaagtgtttacaa-tgtttcccaac 48491523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 14069969 - 14070047
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  14069969 cctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 14070047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 14379997 - 14380075
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  14379997 cctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 14380075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 1113689 - 1113601
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| || |||||||||| |||||| ||||||||| |||||||||||    
T  1113689 cctaatttctatccattttctcaatctcacaaatgaacaagacactcaatg-attttcactcacccaagttgtttacaa-tgtttcccaac 1113601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 8153374 - 8153286
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||| || |||||||||| ||||| |||||||||| |||||||||||    
T  8153374 cctaatttctactcattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaatgtgtttacaa-tgtttcccaac 8153286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 12097995 - 12098083
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||| || |||||||||| |||||| ||||||||| |||||||||||    
T  12097995 cctaatttctacccattttcccaatctaaccaatgaacaagacactcaatg-attttcactcacccaagatgtttacaa-tgtttcccaac 12098083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 84
Target Start/End: Original strand, 31105530 - 31105607
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||||    
T  31105530 ctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 31105607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 38671358 - 38671446
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||| ||| |||||||||||||||| |||||||||||    
T  38671358 cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcgctcacccaaggtgtttacaa-tgtttcccaac 38671446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 43864276 - 43864188
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  43864276 cctaatttctacccacttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 43864188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 48489463 - 48489375
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||| | | || |||||||||| |||||||||||||||| |||||||||||    
T  48489463 cctaatttctacccattttcccaatctcaccaatgaacaagacatttaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 48489375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 26417348 - 26417261
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| | | |||||||||||||| ||||||||||    
T  26417348 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcacccgctcaaggtgtttacaa-tgtttcccaa 26417261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 31518831 - 31518752
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttac 81  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||  || |||||||||| ||||||||||||||    
T  31518831 caaacctaatttctacctattttcccaatctcaccaatgaacaagacactcgatg-attttcactcacccaaggtgtttac 31518752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 35853946 - 35853859
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  35853946 cctaatttctaccctttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 35853859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 41317570 - 41317658
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| ||||||||||||||||||||| ||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  41317570 cctaatttctaccaattttcccaatctcaccaatgaacaagagactcaatg-attttcactcatccaaggtgtttacaa-tgtttcccaac 41317658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41649142 - 41649234
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||| |||||  ||||||||| ||||||||||||||||| || |||||||||  |||||||||||||||| |||||||||||    
T  41649142 caaacctaatttctaccaatttttccaatctcacaaatgaacaagacactcaatg-attttcacttacccaaggtgtttacaa-tgtttcccaac 41649234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 2761439 - 2761526
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||  || |||||||||| ||||| |||||||||| |||||||||||    
T  2761439 ctaatttctaccaattttcccaatctcaccaatgaacaagacactcgatg-attttcactcacccaatgtgtttacaa-tgtttcccaac 2761526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 48408832 - 48408747
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  48408832 taatttctaccctttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 48408747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 196
Target Start/End: Original strand, 1360286 - 1360478
Alignment:
Q  2 aaacctaatttctacccattttctcaatctcac-caatgaacaagacactcattgaattttcactctcccaaggtgtttac-aattgtttcccaactcta 99  Q
    ||||||||||||||||  ||||| ||||||||  | |||||||||| ||||| |||  |||||||| || ||||||||| | ||||||||  ||||||||    
T  1360286 aaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga--tttcactcaccaaaggtgtttcccaattgtttttcaactcta 1360382  T
Q  100 gaatctaa-cccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaa 196  Q
    |||||||| |||||||||||||||||| |  | ||  ||||||||||| ||  || ||||||||||||||  ||||||| || |||||||||| ||||    
T  1360383 gaatctaaccccccaaaagagaaccaatc--catatcctttgatttcccaaaaatattctcttttggttttccaagactcactcaagttgctcgcaaa 1360478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 4178806 - 4178719
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  4178806 cctaatttctaccttttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 4178719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 18126676 - 18126588
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||| ||||||  ||||||||||||||||||| ||||||| || |||||||||| |||||| ||||||||| |||||||||||    
T  18126676 cctaatttctacacatttttccaatctcaccaatgaacaaaacactcaatg-attttcactcacccaagttgtttacaa-tgtttcccaac 18126588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 29991085 - 29990999
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  29991085 cctaatttctatcc-ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 29990999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 496119 - 496206
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||||||||||| ||||||||| ||| ||||| ||||| | || |||||||||| |||||||| ||||||| ||||||||||    
T  496119 cctaatttctacccattttcccaatctcacaaattaacaaaacactaaatg-attttcactcacccaaggtttttacaa-tgtttcccaa 496206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 23555056 - 23554982
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||||    
T  23555056 ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaactc 23554982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 24514912 - 24514984
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  24514912 ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 24514984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 4253666 - 4253754
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||  |||| |||||||||||||||| ||||| ||| ||||||||| || ||||||||||||| ||||| |||||    
T  4253666 cctaatttctacc-attttaccaatttcaccaatgaacaagaaactcaatga-ttttcactcacctaaggtgtttacaaatgttttccaac 4253754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 5116539 - 5116475
Alignment:
Q  136 ctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgac 200  Q
    |||||||||||| ||||||||||||||||||| | ||||||| ||| |||||  |||||||||||    
T  5116539 ctttgatttcctgaggatcttctcttttggttacccaagactcacctaagtttatcacaaatgac 5116475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 95
Target Start/End: Original strand, 5514143 - 5514234
Alignment:
Q  2 aaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||| |||||||||| | |||| |||||||| | ||||||||||| ||||| ||| |||||||||  | ||||||||||||| |||||||||||    
T  5514143 aaacataatttctactcttttt-tcaatctctcaaatgaacaagaaactcaatga-ttttcactcatcgaaggtgtttacaagtgtttcccaac 5514234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 218
Target Start/End: Original strand, 43363683 - 43363759
Alignment:
Q  141 atttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttc 218  Q
    ||||||||| |||||||||||||||| || ||||| | |||||| |||||||| || |||||||  ||||||||||||    
T  43363683 atttcctaaagatcttctcttttggtctctcaagattcacccaaattgctcac-aaggactctcatctcatgtgtttc 43363759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 23344004 - 23343934
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgttt 79  Q
    |||||||||||| |||||  |||||||||||||||| ||||| ||| ||| ||||||||| ||||||||||||    
T  23344004 taatttctaccc-ttttccaaatctcaccaatgaactagacattcaatga-ttttcactcacccaaggtgttt 23343934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 19502194 - 19502122
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||||||| ||||||||||||||| || ||| ||||||  ||||||||||||||| |||||||||||    
T  19502194 ttttcgcaatctcaccactgaacaagacactcaatg-attctcactc-accaaggtgtttacaa-tgtttcccaac 19502122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 23565197 - 23565280
Alignment:
Q  4 acctaatttctacccattttctc--aatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgttt 89  Q
    |||||||||||||| ||||| ||  |||||||||||||||||||||||    |  || ||||||| |||||||||||||||| |||||    
T  23565197 acctaatttctacctattttttcctaatctcaccaatgaacaagacac----ttcatgttcactcacccaaggtgtttacaaatgttt 23565280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 25767097 - 25767180
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    |||||||||||||| ||||  ||||||||   |||||||||||||||| || ||||||||||  ||||||||||||||| ||||||||||    
T  25767097 cctaatttctacccttttttccaatctca---atgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaa 25767180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 3904751 - 3904837
Alignment:
Q  2 aaacctaatttctacccattttctcaatctca-ccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttc 90  Q
    |||||||||||||||| |||||| |||||||  || | |||||||| ||||| |||  |||||||| |||||||||||||||| ||||||    
T  3904751 aaacctaatttctacc-attttcccaatctcttcctaagaacaagagactcaatga--tttcactcgcccaaggtgtttacaaatgtttc 3904837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 36574672 - 36574740
Alignment:
Q  26 caatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||| ||||| ||||||||||||  | ||||||||||| || ||||||||||||| ||||| |||||    
T  36574672 caatctctccaataaacaagacactcgat-aattttcactcacctaaggtgtttacaaatgttttccaac 36574740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25615889 - 25615857
Alignment:
Q  1 caaacctaatttctacccattttctcaatctca 33  Q
    |||||||||||||||||||||||| ||||||||    
T  25615889 caaacctaatttctacccattttcccaatctca 25615857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 2e-85; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 1631868 - 1632081
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||    
T  1631868 cctaatttctacccatttttccaatctcaccaatgaacaagacactcatg--attttcactctctcaaggtgtttacaattgtttcccaactctagaatc 1631965  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  1631966 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactct 1632063  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  1632064 ccactcatgtgtttccca 1632081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 219
Target Start/End: Complemental strand, 45726960 - 45726750
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatct 105  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||   ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  45726960 ctaatttctacccattttcccaatctcaccaatgaataagacactcatg--attttcactctcccaaggtgtttacaattgtttcctaaccctagaatct 45726863  T
Q  106 aacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    ||||||||||||||||||||||||  ||| |||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  45726862 aacccccaaaagagaaccaaccct--tagcctttgatttcactaaggatcttctcttttggtttcacatgactcacccaagttgctcacaaatgactctc 45726765  T
Q  205 cactcatgtgtttcc 219  Q
    |||||||||||||||    
T  45726764 cactcatgtgtttcc 45726750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 35447020 - 35447233
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35447020 cctaatttctaccaattttaccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 35447117  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||| ||||||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  35447118 taacccccaaaagagaaccaacc--cttagcctttgatttcactaagtatcttctcttttggttttacaagactcacccaagttgctcacaaaagactct 35447215  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  35447216 ccactcatgtgtttccca 35447233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 7 - 221
Target Start/End: Original strand, 42288248 - 42288459
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42288248 taatttctacccattttcccaatctcaccaatgcacaagacactcgtg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 42288345  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    | ||| |||||||||||||||||  ||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  42288346 aacccgaaaagagaaccaaccct--tagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctcc 42288443  T
Q  206 actcatgtgtttccca 221  Q
    ||||||||||||||||    
T  42288444 actcatgtgtttccca 42288459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 225
Target Start/End: Complemental strand, 17450623 - 17450405
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||| ||||||||||||   |||||||||||||||||||||||||| ||| ||||||||| |||||||||||| ||| ||||| ||||||||||||||    
T  17450623 cctaatctctacccatttttcaaatctcaccaatgaacaagacactcaatga-ttttcactcacccaaggtgtttgcaaatgtttgccaactctagaatc 17450525  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgact-ct 203  Q
     ||||||||| |||||| |||||||  ||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||    
T  17450524 caacccccaatagagaatcaaccct--tagcctttgatttcctaatgatcttctcttttggtttcacaagactcacccaagtttctcacaattgactcct 17450427  T
Q  204 ccactcatgtgtttcccatccc 225  Q
     | |||||||||||||||||||    
T  17450426 tcgctcatgtgtttcccatccc 17450405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 26 - 217
Target Start/End: Complemental strand, 24398066 - 24397881
Alignment:
Q  26 caatctcaccaatgaacaagacactcattgaattttcactctcccaa-ggtgtttacaattgtttcccaactctagaatctaacccccaaaagagaacca 124  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||   ||||||    
T  24398066 caatctcaccaatgaacaagacactcattga-ttttcactcttccaaaggtgtttacaattgtttcccaactctataatctaacccccaaa---gaacca 24397971  T
Q  125 accctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgttt 217  Q
    |||||  ||| |||||| || |||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  24397970 accct--tag-ctttgactttctaaggatattctcttttggtttcacaagactaacccaaattggtcacaaatgactctccactcatgtgttt 24397881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11690537 - 11690445
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  11690537 caaacctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 11690445  T

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Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 29867901 - 29867813
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  29867901 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 29867813  T

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Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 34139907 - 34139995
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  34139907 cctaatttctacccattttctcaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 34139995  T

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Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 42362388 - 42362296
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  42362388 caaacctaatttctacccattttcccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 42362296  T

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Target: chr2; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 17057505 - 17057583
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  17057505 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 17057583  T

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Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 17085488 - 17085566
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  17085488 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 17085566  T

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Target: chr2; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 36318145 - 36318223
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  36318145 cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 36318223  T

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Target: chr2; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 723876 - 723968
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||| |||  ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  723876 caaacctaatttctacccagttttccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 723968  T

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Target: chr2; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 11151723 - 11151815
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||| ||||| || |||||||||| |||||||||||||||| |||||||||||    
T  11151723 caaatctaatttctacccattttcccaatttcaccaatgaacaagagactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 11151815  T

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Target: chr2; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 14633962 - 14634050
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||  ||||||||| ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  14633962 cctaatttctacccattttaccaatctcacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 14634050  T

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Target: chr2; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 17 - 217
Target Start/End: Complemental strand, 33648191 - 33647993
Alignment:
Q  17 ccattttctcaatctcacca-atgaacaagacactcattgaattttcactctcccaaggtgttt-acaattgtttcccaactctagaatctaacccccaa 114  Q
    ||||||||||||||||  |  ||| |||||||||||| | | |||||||||||||||| ||||| ||  || | ||||||||||||||||||||||||||    
T  33648191 ccattttctcaatctcctctcatgtacaagacactcaatta-ttttcactctcccaagatgttttacggttatgtcccaactctagaatctaacccccaa 33648093  T
Q  115 aagagaaccaaccctcttagtctttgatttcc-taaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgt 213  Q
    |||| ||  ||||||      ||||||||||| |||||||||||||||||||||| | ||||||  || |||| ||| ||||||||||||| |||||| |    
T  33648092 aagataattaacccttg----ctttgatttccctaaggatcttctcttttggttttataagactcgcctaagtagctaacaaatgactctctactcatat 33647997  T

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Target: chr2; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 36773594 - 36773506
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||| | ||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  36773594 cctaatttattcccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 36773506  T

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Target: chr2; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 38312272 - 38312184
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| | |||||||| ||||| |||||||||||    
T  38312272 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacacaaggtgtatacaa-tgtttcccaac 38312184  T

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Target: chr2; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 39284917 - 39284829
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||  ||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||| |||||||||||    
T  39284917 cctaatttctacccatttttccaatctcaccaatgaacaagatactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 39284829  T

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Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 2334558 - 2334641
Alignment:
Q  9 atttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  2334558 atttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 2334641  T

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Target: chr2; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 5723392 - 5723478
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  5723392 cctaatttctaccc-ttttctcaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 5723478  T

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Target: chr2; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 13121800 - 13121712
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||| || |||||||||||||||||||||||| || |||||||||| ||||| |||||||||| |||||||||||    
T  13121800 cctaatttctacc-attttcccagtctcaccaatgaacaagacactcaatg-attttcactcacccaatgtgtttacaaatgtttcccaac 13121712  T

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Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 24885697 - 24885605
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||| ||||||| |||| | || ||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  24885697 caaacctaatttctactcattttcccaattttacaaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 24885605  T

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Target: chr2; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 11067336 - 11067249
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||  |||| ||||||||||| |||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  11067336 ctaatttctacccatttttccaatttcaccaatgaataagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 11067249  T

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Target: chr2; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 33162586 - 33162676
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||  || ||||||| || |||||||||||||||| |||||||||||||    
T  33162586 cctaatttctacccattttcctaatttcaccaatgaacaagacactcgatg-attttcaatcacccaaggtgtttacaa-tgtttcccaactc 33162676  T

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Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 85 - 196
Target Start/End: Original strand, 30218250 - 30218358
Alignment:
Q  85 tgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaa 184  Q
    |||||||||||||||||  ||||||||||||||||||||||     ||||  ||||||||||||||||||  | ||||||||||| ||||||| || |||    
T  30218250 tgtttcccaactctagagcctaacccccaaaagagaaccaa--tatttagcttttgatttcctaaggatc-ccccttttggtttcgcaagactcactcaa 30218346  T
Q  185 gttgctcacaaa 196  Q
    ||||||||||||    
T  30218347 gttgctcacaaa 30218358  T

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Target: chr2; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 45099787 - 45099699
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  45099787 cctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 45099699  T

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Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 36205800 - 36205887
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||| | |||||||||||    
T  36205800 cctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacca-tgtttcccaac 36205887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 14202537 - 14202631
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaag--acactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| |||||||||||||||||| ||||||||  |||||| |||  ||||||| | ||||||||||| |||||||||||||||| |||||||||||    
T  14202537 caaacataatttctacccattttcccaatctcagaaatgaaaaagacacactcaat-aattttcactcacccaaggtgtttacaa-tgtttcccaac 14202631  T

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Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 7451170 - 7451123
Alignment:
Q  170 acaagacttacccaagttgctcacaaatgactctccactcatgtgttt 217  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||    
T  7451170 acaagtcttactcaagttgctcacaaatgactctccactcatgtgttt 7451123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 7815424 - 7815498
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||||||||| || || |||||||| | || ||||||||||||| |||||| ||||    
T  7815424 ttttctcaatctcaccaatgaacaagacacgcaatg-attttcacccacctaaggtgtttacaaatgtttctcaac 7815498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 11049570 - 11049493
Alignment:
Q  17 ccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||  |||||||||||  ||||||||||||| ||| ||||||||  |||||||||||||||| |||||||||||    
T  11049570 ccattttcctaatctcaccaaaaaacaagacactcaatga-ttttcacttacccaaggtgtttacaaatgtttcccaac 11049493  T

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Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 36988212 - 36988299
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| ||||  ||||| ||||||||||||||||||||| || ||||||||||  ||||||||||||| | |||||||||||    
T  36988212 cctaatttctacccttttttccaatcccaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacta-tgtttcccaac 36988299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 43731093 - 43730992
Alignment:
Q  91 ccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgct 190  Q
    ||||||||||||| ||||||| |||||| |||||||| |  ||| ||||||||||||| |||| |||| |||||||||| ||||| | |||||| |||||    
T  43731093 ccaactctagaatttaacccc-aaaaga-aaccaacctt--tagactttgatttcctacggatattctattttggtttcccaagattcacccaaattgct 43730998  T
Q  191 cacaaa 196  Q
    ||||||    
T  43730997 cacaaa 43730992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5700271 - 5700347
Alignment:
Q  18 cattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||| ||||||||||||||||||| ||  |||||| || ||||| |||||||||| |||||| ||||    
T  5700271 cattttctcaatctctccaatgaacaagacactcaatg-tttttcattcacccaaagtgtttacaaatgtttctcaac 5700347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 4503284 - 4503356
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||| ||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  4503284 ttttcccaatctctccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 4503356  T

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Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 12123722 - 12123809
Alignment:
Q  6 ctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||| ||| ||||||| ||||||| | ||||||||||||||||  ||| |||||||||  |||||||||||| || |||||||||||    
T  12123722 ctaatttatactcattttc-caatctctcaaatgaacaagacactcgatga-ttttcactcatccaaggtgtttataaatgtttcccaac 12123809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 16676196 - 16676152
Alignment:
Q  68 cccaaggtgtttac-aattgtttcccaactctagaatctaacccc 111  Q
    |||||||||||| | |||||||||| |||||||||||||||||||    
T  16676196 cccaaggtgttttccaattgtttccaaactctagaatctaacccc 16676152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 42261694 - 42261734
Alignment:
Q  85 tgtttcccaactctagaatctaacccccaaaagagaaccaa 125  Q
    ||||||||||||||||| ||||||||| ||||| |||||||    
T  42261694 tgtttcccaactctagagtctaacccctaaaagggaaccaa 42261734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 152; Significance: 1e-80; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 4283556 - 4283343
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||   ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4283556 cctaatttctacccattttcccaatctcaccaatgaacaagacactcatg--attttcactctcctaaggtgtttacaattgtttcccaactctagaatc 4283459  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| | ||||||| |||||||| |||| |    
T  4283458 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcaaccaagtttctcacaaaagacttt 4283361  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  4283360 ccactcatgtgtttccca 4283343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 40328815 - 40328594
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctag 100  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||   ||||||||||||||||| ||||||||||||||||||||||||||    
T  40328815 caaacctaatttctacccattttcccaatctcacaaatgaacaagacattcatg--attttcactctcccaagatgtttacaattgtttcccaactctag 40328718  T
Q  101 aatctaacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatga 199  Q
    |||||||||||||||||||||||||  ||| ||| |||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  40328717 aatctaacccccaaaagagaaccaa--ctcatagcctttgatttcactaaagatcttctcttttggtttcacaagactcacccaagttgctcacaaaaga 40328620  T
Q  200 ctctccactcatgtgtttcccatccc 225  Q
    |||| |||||||||||||||||||||    
T  40328619 ctctacactcatgtgtttcccatccc 40328594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 40221777 - 40221564
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||  |||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40221777 cctaatttctacccattttaccaatctcaccaaagaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcccaactctagaatc 40221680  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||   |||| |||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||||| ||||||    
T  40221679 taacccccaaaagagaaccaacc--tttagcctttgatttcactaaggatcttctcttttggttttacaagactcacctaagttgctcacaaaagactct 40221582  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  40221581 ccactcatgtgtttccca 40221564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 42435127 - 42435340
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||   |||||||||||||||| |||||||||||||||| ||||||||||||||    
T  42435127 cctaatttctacccatttttccaatctcaccaatgaacaagacactcatg--attttcactctcccaaagtgtttacaattgtttaccaactctagaatc 42435224  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||| ||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||    
T  42435225 taaccctcaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcactcaagttgctcacaaaagactct 42435322  T
Q  204 ccactcatgtgtttccca 221  Q
    ||| |||| |||||||||    
T  42435323 ccattcatatgtttccca 42435340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 11384017 - 11383805
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||  ||||||||  ||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11384017 cctaatttctacccatttttccaatctcat-aatgaacaagacactcatg--attttcactctcccaaggtgtttacaattatttcccaactctagaatc 11383921  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |    
T  11383920 taacccccaaaagagaaccaacc--cttagcctttgatttcactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagacttt 11383823  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||| |||| |||||||    
T  11383822 ccacttatgtatttccca 11383805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 5 - 217
Target Start/End: Complemental strand, 44353825 - 44353615
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| ||||||||| ||||||||||| ||||| ||| |||| |||| ||||| |||||||||||||||||||||||||||||||    
T  44353825 cctaatttctacccattttcccaatctcacaaatgaacaagatactcaatgattttt-actcacccaatgtgtttacaattgtttcccaactctagaatc 44353727  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||||||||||||||  ||||| |||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||||||  ||||||||    
T  44353726 taacccccaaaagagaaccaacc--cttagcctttgatttcactaagaatcttttcttttggtttcacaagactcacccaagttgctcaccgatgactct 44353629  T
Q  204 ccactcatgtgttt 217  Q
    ||||||||||||||    
T  44353628 ccactcatgtgttt 44353615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 7 - 195
Target Start/End: Complemental strand, 18655430 - 18655246
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||| || |||||||||||    
T  18655430 taatttctacccattttctcaatctcaccaatgaacaaaacactcatg--attttcactctcccaaggtgtttacaattgtttcctaagtctagaatcta 18655333  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaa 195  Q
    | ||||||||||| | |||||  ||||| |||||||||| ||||||||||||||||||| |||||||||||| ||| |||||||||||||    
T  18655332 a-ccccaaaagagtatcaacc--cttagcctttgatttcactaaggatcttctcttttgatttcacaagactcaccgaagttgctcacaa 18655246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 95
Target Start/End: Complemental strand, 30291641 - 30291549
Alignment:
Q  2 aaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||||||||||||||| |||||||||||    
T  30291641 aaacctaatttctacccattttctcaatctcaccaatgaacaagacactcaatg-attttcaatcacccaaggtgtttacaaatgtttcccaac 30291549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 95
Target Start/End: Complemental strand, 18141855 - 18141764
Alignment:
Q  3 aacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  18141855 aacctaatttctacccattttcacaatctcaccaatgaacaagacactcaatg-attttcactcgcccaaggtgtttacaaatgtttcccaac 18141764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 4731690 - 4731602
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  4731690 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 4731602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 43036455 - 43036367
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  43036455 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 43036367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 27811310 - 27811232
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||    
T  27811310 cctaatttctacccattttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaat 27811232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 15212818 - 15212730
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||| |||||||||||||||| |||||||||||    
T  15212818 cctaatttctacccattttcccaatctcaccaatgaacaagacattcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 15212730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 40585669 - 40585561
Alignment:
Q  93 aactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctca 192  Q
    |||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |  ||| ||| |||||| |||||||    
T  40585669 aactttagaatcta-cccccaaaagagaaccaaccct--tagtctttgatttcctaaggatcttctcttttggtctaccaatactcacccaaattgctca 40585573  T
Q  193 caaatgactctcc 205  Q
    |||| ||||||||    
T  40585572 caaa-gactctcc 40585561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 96
Target Start/End: Original strand, 10930335 - 10930424
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaact 96  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||||||   ||||||||||||||||  ||||||||||||||||||||||    
T  10930335 cctaatttctatccattttcccaatctcaccgatgaacaagacactcat--gattttcactctcccaaaatgtttacaattgtttcccaact 10930424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 19491831 - 19491922
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |  |||||||||| |||||| ||||||| | |||||||||||    
T  19491831 caaacctaatttctacccattttcccaatctcaccaatgaacaagacactcaat--attttcactcacccaagatgtttacga-tgtttcccaac 19491922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1292595 - 1292687
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||| ||||||||||| || | |||||||||||    
T  1292595 caaacttaatttctacccattttctcaatctcaccaaagaacaagacactcaat-aattttcactcacccaaggtgttcac-agtgtttcccaac 1292687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 33352182 - 33352094
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||| ||||||||||| ||||||||||||||||||||||||||| || ||||||| || |||||||||||||||| |||||||||||    
T  33352182 cctaatttttacccattttcccaatctcaccaatgaacaagacactcaatg-attttcaatcacccaaggtgtttacaa-tgtttcccaac 33352094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 8965828 - 8965914
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttccca 93  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| |||||||||    
T  8965828 cctaatttctacct-ttttcccaatctcaccaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaaatgtttccca 8965914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 40321112 - 40321022
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||| || ||||||| || | |||||||||||||| |||||||||||||    
T  40321112 cctaatttctacccattttcccaatctcacctatgaacaagacactcaatg-attttcagtcactcaaggtgtttacaa-tgtttcccaactc 40321022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3303802 - 3303894
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| |||||||||||||||||| ||||||||||||| ||||||| ||||| || |||||||||| | |||||||||||||| |||||||||||    
T  3303802 caaacttaatttctacccattttcccaatctcaccaataaacaagatactcaatg-attttcactcactcaaggtgtttacaa-tgtttcccaac 3303894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 4743336 - 4743427
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||| |||||||||||  ||||||||||||||||||||||||||| || |||||| ||| |||||||||||||||| |||||||||||    
T  4743336 caaacctaatt-ctacccatttttccaatctcaccaatgaacaagacactcaatg-attttcgctcacccaaggtgtttacaa-tgtttcccaac 4743427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6599008 - 6598916
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||||| | || |||||||||| | |||||||||||||| |||||||||||    
T  6599008 caaacttaatttctacccattttcccaatctcacaaatgaacaagacacttaatg-attttcactcactcaaggtgtttacaa-tgtttcccaac 6598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 6674461 - 6674369
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| |||||||||||||||||| ||||||||| ||||||||||||||| | || |||||||||| | |||||||||||||| |||||||||||    
T  6674461 caaacttaatttctacccattttcccaatctcacaaatgaacaagacacttaatg-attttcactcactcaaggtgtttacaa-tgtttcccaac 6674369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 9765777 - 9765693
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||     | |||||||| |||||||||||||||| |||||||||||    
T  9765777 cctaatttctacccattttcccaatctcaccaatgaacaagacactc-----aatttcactcacccaaggtgtttacaa-tgtttcccaac 9765693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 41366746 - 41366837
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaa 94  Q
    ||||| |||||||||||||||||||||||||||    ||||||||||||||| || |||||||||| |||||||||||||||| ||||||||||    
T  41366746 caaacataatttctacccattttctcaatctcagtcttgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaa 41366837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 97
Target Start/End: Original strand, 1345507 - 1345597
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||| ||| || |||||||||| |||||||||||||||| | |||||||||||    
T  1345507 cctaatttctacacattttcccaatctcacaaatgaacaagacattcaatg-attttcactcacccaaggtgtttacaa-tatttcccaactc 1345597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 7 - 97
Target Start/End: Complemental strand, 5689301 - 5689213
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactc 97  Q
    |||||||||||||||||  ||||||||  ||||||||||||||||| || |||||||||| |||||||||||||||| ||||||| |||||    
T  5689301 taatttctacccatttttccaatctcattaatgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttccaaactc 5689213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41364979 - 41365071
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||||||| |||||| ||||||||    ||||||||||||||| || |||||||||| |||||||||||||||| |||||||||||    
T  41364979 caaacctaatttctaccaattttcccaatctcagtcttgaacaagacactcaatg-attttcactcacccaaggtgtttacaa-tgtttcccaac 41365071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3772228 - 3772177
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactca 52  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  3772228 caaacctaatttctatcaattttctcaatctcaccaatgaacaagacactca 3772177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 17982685 - 17982597
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  17982685 cctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 17982597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 34254467 - 34254543
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  34254467 cctaatttctaccc-ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaat 34254543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 196
Target Start/End: Original strand, 33655472 - 33655628
Alignment:
Q  37 atgaacaagacactcattgaattttcactctcccaaggtgtttacaa-ttgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagt 135  Q
    |||||||||||||||| |||  ||||||||  ||||| ||||| ||| || ||| ||||||||| ||| ||||||   ||||||||||||||||  ||      
T  33655472 atgaacaagacactcaatga--tttcactcatccaagatgttttcaaattattttccaactctaaaatttaacccttgaaagagaaccaaccct--taac 33655567  T
Q  136 ctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaa 196  Q
    ||||||||| ||||||||||||||||||| | ||  |||| | |||||| |||||||||||    
T  33655568 ctttgattttctaaggatcttctcttttgttctcctaagattcacccaaattgctcacaaa 33655628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 8153795 - 8153705
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaaca--agacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||||||||||| |||||||||||||||||||||||||  | ||||||| || ||||||||||  ||||||||| ||||| |||||||||||    
T  8153795 cctaatttctacc-attttctcaatctcaccaatgaacatgacacactcaatg-attttcactcatccaaggtgtatacaaatgtttcccaac 8153705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 18106219 - 18106302
Alignment:
Q  10 tttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||| |||||||  |||||||||| ||||||||||||||||   ||||||||||| |||||||||||||||| |||||||||||    
T  18106219 tttctatccatttttccaatctcaccgatgaacaagacactca-acaattttcactcacccaaggtgtttacaa-tgtttcccaac 18106302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 1746370 - 1746442
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||| |||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  1746370 ttttttcaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 1746442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 10929835 - 10929753
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||| ||||||||||||||||||   |||||||||| |||||||||||||| || |||||||||   ||||||||||||||||    
T  10929835 caaacataatttctacccattttccatatctcaccaaagaacaagacactcaatg-attttcactaatccaaggtgtttacaat 10929753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 30143372 - 30143286
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||||||||| ||||||  |||||||||||||||  || || |||||||||| ||||| |||||||||| |||||||||||    
T  30143372 cctaatttctacccattttcccaatctggccaatgaacaagaca--caatg-attttcactcacccaatgtgtttacaa-tgtttcccaac 30143286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 31218273 - 31218201
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  31218273 ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 31218201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 44303870 - 44303798
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  44303870 ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 44303798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 19945498 - 19945574
Alignment:
Q  7 taatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||| |||| | ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||||    
T  19945498 taatttctacccttttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaat 19945574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 4162533 - 4162454
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||| ||||||||||||||    |||||| ||||||||||||||||| ||| ||||||||| | |||||||||||||||    
T  4162533 caaacctaacttctacccattttcc---tctcactaatgaacaagacactcaatga-ttttcactcgctcaaggtgtttacaat 4162454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 10020398 - 10020321
Alignment:
Q  85 tgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggt 166  Q
    |||||||||||||||||||| |||||   ||| |||| ||| || ||||| |||||||||||||||||||| ||||||||||    
T  10020398 tgtttcccaactctagaatccaaccc---aaaaagaaacaaacc-cttagcctttgatttcctaaggatctcctcttttggt 10020321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 12702790 - 12702862
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    ||||| ||||||||||||||||||||||||| | || ||||||||||  ||||||||||||||| |||||||||||    
T  12702790 ttttcccaatctcaccaatgaacaagacacttaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 12702862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 34256643 - 34256719
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||| || |||||||| |  ||||||||||||||||    
T  34256643 cctaatttctaccatttttc-caatctcaccaatgaacaagacactcaatg-attttcacac-accaaggtgtttacaat 34256719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 42498210 - 42498149
Alignment:
Q  20 ttttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaa 83  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||  |||||||||||||||    
T  42498210 ttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa 42498149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 9633816 - 9633882
Alignment:
Q  151 gatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgttt 217  Q
    ||||||||| |||||||||  |||| | ||||||||||||||||||||||||||  || ||||||||    
T  9633816 gatcttctcgtttggtttcctaagattcacccaagttgctcacaaatgactctcatcttatgtgttt 9633882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 180 - 225
Target Start/End: Original strand, 2999828 - 2999873
Alignment:
Q  180 cccaagttgctcacaaatgactctccactcatgtgtttcccatccc 225  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||||    
T  2999828 cccaagttgctcacaattgactctctactcatgtgtttctcatccc 2999873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 3846083 - 3846167
Alignment:
Q  136 ctttgatttcctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctccactcatgtgtttccca 221  Q
    ||||||||||| || |||| ||||||||||| ||  |||| |||||||| ||||||||||| || ||| | |||||||||||||||    
T  3846083 ctttgatttccaaaagatcgtctcttttggtatccaaagatttacccaatttgctcacaaa-gaatcttctctcatgtgtttccca 3846167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 196
Target Start/End: Original strand, 10101351 - 10101475
Alignment:
Q  69 ccaaggtgtttacaa-ttgtttcccaactctagaatctaacccccaaaagagaaccaaccctcttagtctttgatttcctaaggatcttctcttttggtt 167  Q
    ||||||||||||||| || ||||| ||| |||||||||||||||  |||  | |||||||  ||||| |||||||||  ||||||||| |||||||| |     
T  10101351 ccaaggtgtttacaaattatttcctaacactagaatctaacccc--aaaacgtaccaacc--cttagactttgatttaataaggatctcctcttttgatc 10101446  T
Q  168 tcacaagacttacccaagttgctcacaaa 196  Q
    ||  |||| | | ||||||||||||||||    
T  10101447 tcctaagattcatccaagttgctcacaaa 10101475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 10240113 - 10240070
Alignment:
Q  81 caattgtttcccaactctagaatctaacccccaaaagagaaccaac 126  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||    
T  10240113 caattgtttcccaaatctagaatctaacccc--aaagagaaccaac 10240070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 217
Target Start/End: Complemental strand, 7357 - 7151
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatcta 106  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  7357 taatttctacccatttttccaatctcaccaatgaacaagacactcatg--attttcactctcccaaggtgtttacaattgtttcc-agctctagaatcta 7261  T
Q  107 acccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactctcc 205  Q
    |||||||||||||||||||||||  ||| |||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  7260 acccccaaaagagaaccaaccct--tagcctttgattttactaaggatcttctcttttggtttcacaagactcacccaagttgctcacaaaagactctcc 7163  T
Q  206 actcatgtgttt 217  Q
    ||||||||||||    
T  7162 actcatgtgttt 7151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 136; Significance: 4e-71; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 5 - 221
Target Start/End: Original strand, 80419 - 80632
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||   |||||||||||||||||||||| |||||||||||| ||||||||||||    
T  80419 cctaatttctacccattttcccaatctcagcaatgaacaagacactcatg--attttcactctcccaaggtgttcacaattgtttcctaactctagaatc 80516  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    |||||||||||| ||||||||||  ||||| |||||||||| |||||||||| ||||||| ||||| ||||||| |||||||||||||||||| ||||||    
T  80517 taacccccaaaatagaaccaacc--cttagcctttgatttcactaaggatctactcttttagtttcccaagactcacccaagttgctcacaaaagactct 80614  T
Q  204 ccactcatgtgtttccca 221  Q
    || |||||||||||||||    
T  80615 ccgctcatgtgtttccca 80632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 18139 - 18346
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    ||||||||||||| |||||| || |||||||||||||||| ||||||||   |||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  18139 cctaatttctaccaattttcccactctcaccaatgaacaaaacactcatg--attttcactctcccaaagtgtttacaattgtttcc-aactctataatc 18235  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||| ||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||| |||||    
T  18236 taacccc-aaaagagaaccaac--tcttagtctttgatttcactaaggatcttctcttttggttttacaagactcactcaagttgctcacaaataactct 18332  T
Q  204 ccactcatgtgttt 217  Q
    ||||||||||||||    
T  18333 ccactcatgtgttt 18346  T

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Target: scaffold0286 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 5 - 221
Target Start/End: Complemental strand, 11589 - 11377
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaactctagaatc 104  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||| ||| ||||||||| || |||||||||||||| |||||||||||||||||||    
T  11589 cctaatttctaccatttttcccaatctcaccaatgaacaagacactcaatga-ttttcactcacc-aaggtgtttacaat-gtttcccaactctagaatc 11493  T
Q  105 taacccccaaaagagaaccaaccctcttagtctttgatttc-ctaaggatcttctcttttggtttcacaagacttacccaagttgctcacaaatgactct 203  Q
    ||||||| ||||||||| ||||| |  ||| |||||||||  |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  11492 taaccccaaaaagagaaacaacctt--tagcctttgattttactaatgatcttctcttttggtttcacaagactcacccaagttgctcagaaatgactct 11395  T
Q  204 ccactcatgtgtttccca 221  Q
    ||||||||||||||||||    
T  11394 ccactcatgtgtttccca 11377  T

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Target: scaffold0197 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 65 - 204
Target Start/End: Original strand, 1591 - 1737
Alignment:
Q  65 tctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaaccc--------tcttagtctttgatttcctaaggatct 155  Q
    ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||| |        | | ||  |||||||||||||||||||    
T  1591 tctcccaaggtgttttctaattgtttcccaactctagaatctaa-ccccaaaagagaaccaacacttataagttataagcttttgatttcctaaggatct 1689  T
Q  156 tctcttttggtttcacaagacttacccaagttgctcacaaatgactctc 204  Q
    ||||||||| | || |||||||  |||||||||||||| ||||||||||    
T  1690 tctcttttgatctcccaagactcgcccaagttgctcac-aatgactctc 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 114632 - 114547
Alignment:
Q  7 taatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| || ||||||||||  ||||||||||||||| |||||||||||    
T  114632 taatttctaccctttttcccaatctcaccaatgaacaagacactcaatg-attttcactc-accaaggtgtttacaa-tgtttcccaac 114547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 20547 - 20629
Alignment:
Q  1 caaacctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    |||||||||||||| | ||||||| |||||||||||||||| || | ||||| || |||||||||| |||||||||||||||||    
T  20547 caaacctaatttctgctcattttcccaatctcaccaatgaataataaactcaatg-attttcactcacccaaggtgtttacaat 20629  T

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Target: scaffold0006 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 149233 - 149311
Alignment:
Q  5 cctaatttctacccattttctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaat 84  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||||||| || |||||||||  |||||||||||||||||    
T  149233 cctaatttctatccgttttcccaatctcacaaatgaacaagacactcaatg-attttcactaccccaaggtgtttacaat 149311  T

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Target: scaffold1519 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 948 - 861
Alignment:
Q  5 cctaatttctacccatttt-ctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| |||| | |||||||||||| |||||||||||||| ||| ||||||||| || ||||||||||||| |||||||||||    
T  948 cctaatttctacccttttttcccaatctcaccaa-gaacaagacactcaatga-ttttcactcacc-aaggtgtttacaa-tgtttcccaac 861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 25032 - 24981
Alignment:
Q  59 tttcactctcccaaggtgtttacaattgtttcccaactctagaatctaaccc 110  Q
    ||||||||||||||||||||||||||||||||| ||| | ||||||| ||||    
T  25032 tttcactctcccaaggtgtttacaattgtttccaaacccaagaatctcaccc 24981  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 66
Target Start/End: Complemental strand, 434565 - 434504
Alignment:
Q  5 cctaatttctacccattttctc-aatctcaccaatgaacaagacactcattgaattttcactc 66  Q
    |||||||||||||| ||||| | |||||||||||||||||||||||||| || ||||||||||    
T  434565 cctaatttctaccctttttccccaatctcaccaatgaacaagacactcaatg-attttcactc 434504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 85 - 125
Target Start/End: Original strand, 490529 - 490569
Alignment:
Q  85 tgtttcccaactctagaatctaacccccaaaagagaaccaa 125  Q
    ||||||||||||||||| ||||||||| ||||| |||||||    
T  490529 tgtttcccaactctagagtctaacccctaaaagggaaccaa 490569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 11298 - 11385
Alignment:
Q  5 cctaatttctacccattt-tctcaatctcaccaatgaacaagacactcattgaattttcactctcccaaggtgtttacaattgtttcccaac 95  Q
    |||||||||||||| ||| || |||||||||||| |||||||||||||| ||| ||| ||||| || ||||||||||||| |||||||||||    
T  11298 cctaatttctacccttttctcccaatctcaccaa-gaacaagacactcaatga-tttacactcacc-aaggtgtttacaa-tgtttcccaac 11385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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