View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15906_low_9 (Length: 532)

Name: NF15906_low_9
Description: NF15906
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15906_low_9
NF15906_low_9
[»] chr1 (21 HSPs)
chr1 (119-490)||(3046146-3046517)
chr1 (20-82)||(3046514-3046576)
chr1 (373-481)||(2643801-2643905)
chr1 (371-480)||(26349966-26350070)
chr1 (425-474)||(3261911-3261960)
chr1 (373-473)||(9768803-9768899)
chr1 (393-473)||(43020636-43020712)
chr1 (373-462)||(5684127-5684211)
chr1 (373-481)||(23758238-23758343)
chr1 (417-480)||(195089-195152)
chr1 (429-480)||(4605830-4605881)
chr1 (442-480)||(4511512-4511550)
chr1 (373-480)||(9769567-9769670)
chr1 (436-474)||(38028601-38028639)
chr1 (393-491)||(7906302-7906396)
chr1 (436-473)||(19866539-19866576)
chr1 (436-473)||(48260183-48260220)
chr1 (417-470)||(50575946-50575999)
chr1 (436-480)||(1576108-1576152)
chr1 (373-417)||(4146339-4146383)
chr1 (436-480)||(50147588-50147632)
[»] chr8 (13 HSPs)
chr8 (423-485)||(39855137-39855199)
chr8 (436-481)||(22438570-22438615)
chr8 (437-485)||(7345493-7345541)
chr8 (428-482)||(14011023-14011077)
chr8 (437-481)||(4604339-4604383)
chr8 (444-474)||(36593266-36593296)
chr8 (436-481)||(220348-220393)
chr8 (436-481)||(689503-689548)
chr8 (436-481)||(733971-734016)
chr8 (436-481)||(857867-857912)
chr8 (441-474)||(26773695-26773728)
chr8 (423-468)||(29090186-29090231)
chr8 (373-462)||(39432333-39432418)
[»] chr4 (9 HSPs)
chr4 (373-482)||(21023337-21023441)
chr4 (443-485)||(27921967-27922009)
chr4 (373-482)||(49039430-49039535)
chr4 (421-480)||(6481571-6481630)
chr4 (443-474)||(39449470-39449501)
chr4 (393-480)||(21752823-21752906)
chr4 (398-485)||(52556657-52556740)
chr4 (444-481)||(16294022-16294059)
chr4 (402-480)||(47416502-47416576)
[»] chr6 (12 HSPs)
chr6 (398-473)||(7233995-7234066)
chr6 (393-481)||(4844168-4844252)
chr6 (381-473)||(22730695-22730784)
chr6 (437-481)||(30668170-30668214)
chr6 (371-481)||(9031769-9031876)
chr6 (443-480)||(3243887-3243924)
chr6 (437-474)||(29204862-29204899)
chr6 (436-485)||(34883802-34883851)
chr6 (436-479)||(3030030-3030074)
chr6 (436-480)||(17305581-17305624)
chr6 (417-473)||(26669653-26669709)
chr6 (442-474)||(32540944-32540976)
[»] chr5 (15 HSPs)
chr5 (418-480)||(20220137-20220199)
chr5 (423-482)||(3535921-3535980)
chr5 (423-482)||(17137852-17137911)
chr5 (423-480)||(31004117-31004174)
chr5 (442-481)||(39684308-39684347)
chr5 (423-474)||(42553134-42553185)
chr5 (416-474)||(4429187-4429245)
chr5 (436-473)||(11736940-11736977)
chr5 (424-481)||(22687867-22687924)
chr5 (436-473)||(27006404-27006441)
chr5 (398-488)||(38128992-38129078)
chr5 (436-473)||(40384315-40384352)
chr5 (398-482)||(9963446-9963524)
chr5 (445-481)||(16452680-16452716)
chr5 (373-482)||(40250162-40250267)
[»] chr2 (13 HSPs)
chr2 (425-491)||(30737034-30737100)
chr2 (425-473)||(16310053-16310101)
chr2 (437-480)||(17896883-17896926)
chr2 (373-473)||(34107279-34107375)
chr2 (393-473)||(37516015-37516091)
chr2 (436-481)||(35352390-35352435)
chr2 (373-470)||(18065259-18065352)
chr2 (443-490)||(18089800-18089847)
chr2 (436-474)||(2057543-2057581)
chr2 (442-480)||(44487754-44487792)
chr2 (420-473)||(22014646-22014699)
chr2 (442-474)||(2971134-2971166)
chr2 (442-474)||(34644478-34644510)
[»] chr3 (16 HSPs)
chr3 (417-492)||(40160780-40160855)
chr3 (423-473)||(16985071-16985121)
chr3 (420-474)||(23025945-23025999)
chr3 (417-477)||(17262264-17262324)
chr3 (373-482)||(19137624-19137729)
chr3 (402-482)||(50724401-50724475)
chr3 (402-482)||(50788373-50788447)
chr3 (373-415)||(43911619-43911661)
chr3 (437-474)||(28951931-28951968)
chr3 (436-481)||(42665911-42665956)
chr3 (437-470)||(43911671-43911704)
chr3 (427-480)||(47497133-47497186)
chr3 (393-474)||(4045627-4045704)
chr3 (444-480)||(5164140-5164176)
chr3 (442-474)||(33533273-33533305)
chr3 (437-473)||(38507711-38507747)
[»] chr7 (12 HSPs)
chr7 (371-474)||(16814700-16814799)
chr7 (374-473)||(32309142-32309237)
chr7 (398-492)||(33236242-33236332)
chr7 (437-490)||(44409265-44409318)
chr7 (373-470)||(7392303-7392396)
chr7 (442-474)||(41000830-41000862)
chr7 (381-473)||(43635601-43635689)
chr7 (436-474)||(28555844-28555882)
chr7 (393-474)||(11808063-11808141)
chr7 (436-473)||(42976594-42976631)
chr7 (442-470)||(11651118-11651146)
chr7 (428-480)||(18660684-18660736)
[»] scaffold0002 (1 HSPs)
scaffold0002 (437-482)||(440464-440509)
[»] scaffold0118 (1 HSPs)
scaffold0118 (436-490)||(37305-37359)
[»] scaffold0009 (1 HSPs)
scaffold0009 (375-473)||(62720-62814)
[»] scaffold0126 (1 HSPs)
scaffold0126 (436-468)||(22849-22881)
[»] scaffold0119 (1 HSPs)
scaffold0119 (417-473)||(1084-1140)


Alignment Details
Target: chr1 (Bit Score: 273; Significance: 1e-152; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 119 - 490
Target Start/End: Complemental strand, 3046517 - 3046146
Alignment:
Q  119 cttaaaataaaaatatatgttttttgtgtttgggttgtgaaaatgtgacttttgtgtttgatggagaaattacgtgaccgacaattttttgaaggtaggg 218  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3046517 cttaaaataaaaatatatgttttttttgtttgggttgtgaaaatgtgacttttgtgtttgatggagaaatttcgtgaccgacaattttttgaaggtaggg 3046418  T
Q  219 ctgcgatcgagagtgaaaatgagagaaaactatcatatgaggacgtcagtaaataaatctataggnnnnnnnnnggagaaaaaatgtgaacaaataccat 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||          |||| ||||||||||||||| ||||    
T  3046417 ctgcgatcgagagtgaaaatgagagaaaactatcatatgaggacgtcagtgaataaatctataggttttttttttgagagaaaatgtgaacaaatgccat 3046318  T
Q  319 cactggaaatcaaaatctataggttattaacaatgatcatgtagttcctttcaacatagcttagttggcagaagcatgtattgttatatgcaggggttgg 418  Q
    |||| | |||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| |||||||||||||||| |||||||||    
T  3046317 cactaggaatcaaaatctataggttattaacaatgatcacgtagttcctctgaacatagcttagttggcagaaacatgtattgttatatgtaggggttgg 3046218  T
Q  419 ctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactaggttatttga 490  Q
    |||||||||||||||||||||| ||||||||||||||||||||| || ||||||| ||||||| ||||||||    
T  3046217 ctgaggtttgaacctctgacaccccacttattcaccttaaaaaaggtaaattctagtcactagattatttga 3046146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 3046576 - 3046514
Alignment:
Q  20 ttctgtctactaatcatatatggtgaacgatctatattaccttttcatcttcaactttgctta 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3046576 ttctgtctactaatcatatatggtgaacgatctatattaccttttcatcttcaactttgctta 3046514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 481
Target Start/End: Complemental strand, 2643905 - 2643801
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattct 472  Q
    ||||||||||||||||||  |||| ||| ||||||||| |||| ||    |||||||||| | ||||| ||||||||||||||||||||||||||| |||    
T  2643905 catagcttagttggcagagacatgcattattatatgcatgggtcgg----ggtttgaaccccagacaccccacttattcaccttaaaaaatgtgaactct 2643810  T
Q  473 aatcactag 481  Q
    || ||||||    
T  2643809 aaccactag 2643801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 480
Target Start/End: Complemental strand, 26350070 - 26349966
Alignment:
Q  371 aacatagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaatt 470  Q
    |||||||||||| |||||||  |||||||| ||||||||||||||||     |||| ||||| |  |||| |||||||||||||||||||||| ||||||    
T  26350070 aacatagcttagatggcagagacatgtattattatatgcaggggttg-----ggttcgaaccccaaacaccccacttattcaccttaaaaaatatgaatt 26349976  T
Q  471 ctaatcacta 480  Q
     || ||||||    
T  26349975 ttagtcacta 26349966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 474
Target Start/End: Original strand, 3261911 - 3261960
Alignment:
Q  425 tttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    |||||||||| |||| |||||||||||||||| |||||||||||||||||    
T  3261911 tttgaacctcagacattccacttattcaccttgaaaaatgtgaattctaa 3261960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 473
Target Start/End: Complemental strand, 9768899 - 9768803
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattct 472  Q
    ||||||| |||||||||   |||| |||||||||||||||||| ||    |||| ||||| | ||||| ||||||||||||||| ||||| |||||||||    
T  9768899 catagctcagttggcagggacatgcattgttatatgcaggggtcgg----ggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattct 9768804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 43020636 - 43020712
Alignment:
Q  393 catgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    |||| ||| |||||||||||||||||    |||| ||||||| ||||| ||||| ||||||||| ||||||||||||||||    
T  43020636 catgcattattatatgcaggggttgg----ggttcgaacctcggacaccccactcattcaccttgaaaaatgtgaattcta 43020712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 373 - 462
Target Start/End: Original strand, 5684127 - 5684211
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaa 462  Q
    ||||||| ||||||||||  |||| ||| |||||||||||||||     ||| ||||||||| ||||| |||||||||||| ||||||||    
T  5684127 catagctcagttggcagagacatgcattattatatgcaggggtt-----aggattgaacctcagacaccccacttattcactttaaaaaa 5684211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 481
Target Start/End: Complemental strand, 23758343 - 23758238
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccac-ttattcaccttaaaaaatgtgaattc 471  Q
    ||||||| ||||||||||| | || ||| ||||||||||||||    ||||||| ||||| |  |||| |||| ||||||| |||||||| |||||||||    
T  23758343 catagctcagttggcagaaacgtgcattattatatgcaggggt----tgaggttcgaaccccgaacaccccactttattcatcttaaaaattgtgaattc 23758248  T
Q  472 taatcactag 481  Q
    ||| ||||||    
T  23758247 taaccactag 23758238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 195089 - 195152
Alignment:
Q  417 ggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||||||||| | ||| | ||||| ||||||||||||||| ||||| ||||||||||| |||||    
T  195089 ggctgaggttcgtaccccagacaccccacttattcaccttgaaaaaggtgaattctaaccacta 195152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 429 - 480
Target Start/End: Complemental strand, 4605881 - 4605830
Alignment:
Q  429 aacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||||| |||||  || ||||||||||||||||| |||||||||||||||||    
T  4605881 aacctcagacacctcatttattcaccttaaaaaaggtgaattctaatcacta 4605830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 480
Target Start/End: Complemental strand, 4511550 - 4511512
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  4511550 ccacttattcaccttaaaaaaggtgaattctaaccacta 4511512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 480
Target Start/End: Complemental strand, 9769670 - 9769567
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattct 472  Q
    ||||||| |||||||||   |||| ||| ||||||| |||| ||||    |||| ||||| | ||||| ||||||||||||||| ||||| |||||||||    
T  9769670 catagctcagttggcagggacatgcattattatatgtagggattgg----ggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattct 9769575  T
Q  473 aatcacta 480  Q
    || |||||    
T  9769574 aaccacta 9769567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 474
Target Start/End: Original strand, 38028601 - 38028639
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  38028601 gacaccccacttattcaccttgaaaaatgtgaattctaa 38028639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 491
Target Start/End: Complemental strand, 7906396 - 7906302
Alignment:
Q  393 catgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactaggttatttgaa 491  Q
    |||| ||||||||||||||||| |||    |||| |||||   ||||| || |||||| ||||||||||||||||||||||  ||||||| || |||||    
T  7906396 catgcattgttatatgcaggggctgg----ggttcgaacccgggacaccccgcttattgaccttaaaaaatgtgaattctagccactagggtacttgaa 7906302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Original strand, 19866539 - 19866576
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  19866539 gacaccccacttattcaccttaaaaaaggtgaattcta 19866576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Complemental strand, 48260220 - 48260183
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  48260220 gacaccccacttattcaccttgaaaaatgtgaattcta 48260183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 470
Target Start/End: Original strand, 50575946 - 50575999
Alignment:
Q  417 ggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaatt 470  Q
    ||||| |||| ||||||| |||||  |||||||||||||||||||| |||||||    
T  50575946 ggctggggttcgaacctcagacacctcacttattcaccttaaaaaaggtgaatt 50575999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 480
Target Start/End: Complemental strand, 1576152 - 1576108
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    ||||| ||||||||| ||||| ||||| |||||||||||||||||    
T  1576152 gacaccccacttatttaccttgaaaaaagtgaattctaatcacta 1576108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 417
Target Start/End: Original strand, 4146339 - 4146383
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttg 417  Q
    ||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  4146339 catagctcagttgacagaaacatgcattgttatatgcaggggttg 4146383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 50147588 - 50147632
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    ||||| ||| ||||||||||||||||| ||||||||||| |||||    
T  50147588 gacaccccatttattcaccttaaaaaaagtgaattctaaccacta 50147632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 423 - 485
Target Start/End: Complemental strand, 39855199 - 39855137
Alignment:
Q  423 ggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactaggtta 485  Q
    |||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  39855199 ggtttgaacctcagacactccacttatttaccttaaaaaagatgaattctaatcactaggtta 39855137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 22438615 - 22438570
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  22438615 gacactccacttattcaccttaaaaaaggtgaattctaatcactag 22438570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 437 - 485
Target Start/End: Original strand, 7345493 - 7345541
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattctaatcactaggtta 485  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||||||    
T  7345493 acaccccacttattcaccttaaaaaaggtgaattctaatcattaggtta 7345541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 482
Target Start/End: Complemental strand, 14011077 - 14011023
Alignment:
Q  428 gaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactagg 482  Q
    ||||||| ||||  ||||||||||| ||||||||||||||||||||| |||||||    
T  14011077 gaacctcggacatcccacttattcatcttaaaaaatgtgaattctaaccactagg 14011023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 481
Target Start/End: Complemental strand, 4604383 - 4604339
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||||||||||||||||||||||||  |||||||||| ||||||    
T  4604383 acactccacttattcaccttaaaaaagatgaattctaaccactag 4604339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 444 - 474
Target Start/End: Original strand, 36593266 - 36593296
Alignment:
Q  444 acttattcaccttaaaaaatgtgaattctaa 474  Q
    |||||||||||||||||||||||||||||||    
T  36593266 acttattcaccttaaaaaatgtgaattctaa 36593296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 220393 - 220348
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  220393 gacaccccacttattcaccttgaaaaaggtgaattctaaccactag 220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 689548 - 689503
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  689548 gacaccccacttattcaccttgaaaaaggtgaattctaaccactag 689503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 734016 - 733971
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  734016 gacaccccacttattcaccttgaaaaaggtgaattctaaccactag 733971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 857912 - 857867
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  857912 gacaccccacttattcaccttgaaaaaggtgaattctaaccactag 857867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 441 - 474
Target Start/End: Complemental strand, 26773728 - 26773695
Alignment:
Q  441 tccacttattcaccttaaaaaatgtgaattctaa 474  Q
    |||||||||||| |||||||||||||||||||||    
T  26773728 tccacttattcatcttaaaaaatgtgaattctaa 26773695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 468
Target Start/End: Original strand, 29090186 - 29090231
Alignment:
Q  423 ggtttgaacctctgacactccacttattcaccttaaaaaatgtgaa 468  Q
    |||| |||||||||||||| |||||||||| ||||||||| |||||    
T  29090186 ggttcgaacctctgacacttcacttattcatcttaaaaaaagtgaa 29090231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 462
Target Start/End: Complemental strand, 39432418 - 39432333
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaa 462  Q
    ||||||| |||||||||   |||| | |||||||||||||||||||    |||| ||||||| ||||| |||||||||||| || |||||    
T  39432418 catagctcagttggcagggacatgcaatgttatatgcaggggttgg----ggttcgaacctcagacaccccacttattcactttgaaaaa 39432333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 21023441 - 21023337
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattct 472  Q
    ||||||| ||||||||||| |||| |||||||||| | ||||||||    |||| ||||| | ||||| ||||||||||||||| ||||| |||||||||    
T  21023441 catagctcagttggcagaaacatgcattgttatatcc-ggggttgg----ggttcgaacccccgacaccccacttattcaccttgaaaaaggtgaattct 21023347  T
Q  473 aatcactagg 482  Q
    || |||||||    
T  21023346 aaccactagg 21023337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 443 - 485
Target Start/End: Original strand, 27921967 - 27922009
Alignment:
Q  443 cacttattcaccttaaaaaatgtgaattctaatcactaggtta 485  Q
    |||||||||| ||||||||||||||||||||| ||||||||||    
T  27921967 cacttattcatcttaaaaaatgtgaattctaaccactaggtta 27922009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 49039535 - 49039430
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattct 472  Q
    ||||||| |||||||||   |||| ||||||||||||||||  |||    |||| ||||| | ||||| ||||||||||||||| ||||| |||||||||    
T  49039535 catagctcagttggcagggacatgcattgttatatgcagggactgg----ggttcgaaccccggacaccccacttattcaccttgaaaaaggtgaattct 49039440  T
Q  473 aatcactagg 482  Q
    |  |||||||    
T  49039439 agccactagg 49039430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 480
Target Start/End: Complemental strand, 6481630 - 6481571
Alignment:
Q  421 gaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||||| ||||||| ||| | ||||||||||||||||||||  |||||||||| ||||||    
T  6481630 gaggttcgaacctcagacgccccacttattcaccttaaaaatggtgaattctagtcacta 6481571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 474
Target Start/End: Original strand, 39449470 - 39449501
Alignment:
Q  443 cacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||||||||||||||||||||||||||||||    
T  39449470 cacttattcaccttaaaaaatgtgaattctaa 39449501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 480
Target Start/End: Original strand, 21752823 - 21752906
Alignment:
Q  393 catgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||||||| ||||||||||||| |||    |||||||||| |  |||||||||||||| |||||||||||  ||| |||||| |||||    
T  21752823 catgtattattatatgcaggggctgg----ggtttgaaccccaaacactccacttatttaccttaaaaaaattgatttctaaccacta 21752906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 485
Target Start/End: Complemental strand, 52556740 - 52556657
Alignment:
Q  398 attgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactaggtta 485  Q
    |||||||||||||||||| ||    |||| |||| ||  ||||||||||||||| |||||||||||| ||||| |||  |||||||||    
T  52556740 attgttatatgcaggggtcgg----ggttcgaacatcgaacactccacttattctccttaaaaaatgagaattataactactaggtta 52556657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 16294022 - 16294059
Alignment:
Q  444 acttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  16294022 acttattcaccttaaaaatggtgaattctaatcactag 16294059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 480
Target Start/End: Original strand, 47416502 - 47416576
Alignment:
Q  402 ttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||||||||||||||||    |||| ||| ||| ||||| |||||||||||| || ||||| ||||||||||| |||||    
T  47416502 ttatatgcaggggttgg----ggttcgaatctcggacaccccacttattcactttgaaaaaggtgaattctaaccacta 47416576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 398 - 473
Target Start/End: Original strand, 7233995 - 7234066
Alignment:
Q  398 attgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||||||||||||||| |||    |||||||||||| ||||| ||||||||||||||| ||||| ||||||||||    
T  7233995 attgttatatgcaggggctgg----ggtttgaacctcggacaccccacttattcaccttgaaaaaggtgaattcta 7234066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 481
Target Start/End: Original strand, 4844168 - 4844252
Alignment:
Q  393 catgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    |||| |||||||||||||||||| ||    ||||| |||||| |||||  |||||||||||||| ||||| ||||||||||| ||||||    
T  4844168 catgcattgttatatgcaggggtcgg----ggtttaaacctcagacacctcacttattcaccttgaaaaaagtgaattctaaccactag 4844252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 473
Target Start/End: Complemental strand, 22730784 - 22730695
Alignment:
Q  381 agttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaa-aatgtgaattcta 473  Q
    ||||||||||  |||| ||||||||||||||||     |||| ||| ||||||| ||||| ||||||||||||||||||| || ||||||||||    
T  22730784 agttggcagagacatgcattgttatatgcaggga----ctgaagttcgaacctcggacaccccacttattcaccttaaaataaggtgaattcta 22730695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 481
Target Start/End: Complemental strand, 30668214 - 30668170
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    |||| ||||||||||||||||||||||||||||| || |||||||    
T  30668214 acaccccacttattcaccttaaaaaatgtgaattatagtcactag 30668170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 371 - 481
Target Start/End: Original strand, 9031769 - 9031876
Alignment:
Q  371 aacatagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcacct-taaaaaatgtgaat 469  Q
    ||||||||| |||||||||   |||| |||||||||||||||| |    ||| ||||||||||| ||||| |||||||||||  |  |||||| ||||||    
T  9031769 aacatagctcagttggcagggacatgcattgttatatgcagggct----tgaagtttgaacctcagacaccccacttattcatttaaaaaaaaggtgaat 9031864  T
Q  470 tctaatcactag 481  Q
    ||||| ||||||    
T  9031865 tctaaccactag 9031876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 480
Target Start/End: Original strand, 3243887 - 3243924
Alignment:
Q  443 cacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  3243887 cacttattcaccttaaaaaaggtgaattctaaccacta 3243924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 474
Target Start/End: Complemental strand, 29204899 - 29204862
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    |||| ||||||||||||||||||||| |||||||||||    
T  29204899 acaccccacttattcaccttaaaaaaagtgaattctaa 29204862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 485
Target Start/End: Original strand, 34883802 - 34883851
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactaggtta 485  Q
    ||||| |||||||||||||||||||||||| || |||||  |||||||||    
T  34883802 gacaccccacttattcaccttaaaaaatgtcaactctaactactaggtta 34883851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 479
Target Start/End: Original strand, 3030030 - 3030074
Alignment:
Q  436 gacactccacttattcacctt-aaaaaatgtgaattctaatcact 479  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||    
T  3030030 gacaccccacttattcaccttaaaaaaatgtgaattctaaccact 3030074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 480
Target Start/End: Original strand, 17305581 - 17305624
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    ||||| ||||||||||||||| ||||| |||||||||||||||||    
T  17305581 gacaccccacttattcaccttgaaaaa-gtgaattctaatcacta 17305624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 473
Target Start/End: Complemental strand, 26669709 - 26669653
Alignment:
Q  417 ggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||| |||| ||||| | ||||| ||||||||||||||| ||||| ||||||||||    
T  26669709 ggctggggttcgaaccccagacaccccacttattcaccttgaaaaaggtgaattcta 26669653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 474
Target Start/End: Complemental strand, 32540976 - 32540944
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||||||||||||||||||| |||||||||||    
T  32540976 ccacttattcaccttaaaaaaagtgaattctaa 32540944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 480
Target Start/End: Original strand, 20220137 - 20220199
Alignment:
Q  418 gctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||| |||| ||||||  ||||| ||||||||| |||||||||||||||||||||||||||||    
T  20220137 gctggggttcgaaccttggacaccccacttatttaccttaaaaaatgtgaattctaatcacta 20220199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 482
Target Start/End: Complemental strand, 3535980 - 3535921
Alignment:
Q  423 ggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactagg 482  Q
    |||| ||||| | ||||| ||||||||||||||||||||| ||||||||||| |||||||    
T  3535980 ggttcgaaccccggacaccccacttattcaccttaaaaaaagtgaattctaaccactagg 3535921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 482
Target Start/End: Complemental strand, 17137911 - 17137852
Alignment:
Q  423 ggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactagg 482  Q
    |||| ||||| | ||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  17137911 ggttcgaacccccgacactccacttattcaccttgaaaaacgtgaattctaaccactagg 17137852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 423 - 480
Target Start/End: Complemental strand, 31004174 - 31004117
Alignment:
Q  423 ggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||||||||| | |||| |||||||||||||||||||||| || ||||||| ||||||    
T  31004174 ggtttgaaccccggacattccacttattcaccttaaaaaaggtaaattctagtcacta 31004117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 442 - 481
Target Start/End: Original strand, 39684308 - 39684347
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  39684308 ccacttattcaccttaaaaaaggtgaattctaaccactag 39684347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 474
Target Start/End: Complemental strand, 42553185 - 42553134
Alignment:
Q  423 ggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    |||| ||||| | |||||| |||||||||||||| |||||||||||||||||    
T  42553185 ggttcgaaccccggacactacacttattcaccttgaaaaatgtgaattctaa 42553134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 474
Target Start/End: Original strand, 4429187 - 4429245
Alignment:
Q  416 tggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||||||||| ||| ||| ||||| ||||||||||| |||||||||  ||||||||||    
T  4429187 tggctgaggttcgaatctcagacaccccacttattcatcttaaaaaagatgaattctaa 4429245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Original strand, 11736940 - 11736977
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  11736940 gacactcaacttattcaccttaaaaaaggtgaattcta 11736977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Complemental strand, 22687924 - 22687867
Alignment:
Q  424 gtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||||||| |  |||| ||||||||||||||| ||||| ||||||||||| ||||||    
T  22687924 gtttgaaccccgaacaccccacttattcaccttgaaaaaggtgaattctaaccactag 22687867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Original strand, 27006404 - 27006441
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  27006404 gacactccacttattcaccttgaaaaaggtgaattcta 27006441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 488
Target Start/End: Complemental strand, 38129078 - 38128992
Alignment:
Q  398 attgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactaggttattt 488  Q
    |||||||||||||||||| ||    |||| |||||   ||||||||||||||||||||| ||||   |||||||||| ||||||| |||||    
T  38129078 attgttatatgcaggggtcgg----ggttcgaaccctggacactccacttattcaccttgaaaatgatgaattctaaccactaggctattt 38128992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Original strand, 40384315 - 40384352
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||| ||||||||||||||||||||| ||||||||||    
T  40384315 gacaccccacttattcaccttaaaaaaggtgaattcta 40384352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 482
Target Start/End: Original strand, 9963446 - 9963524
Alignment:
Q  398 attgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactagg 482  Q
    |||||||||||||||||||||    |||| |||| || ||| | |||||||||||||||| |||  ||||||||||| |||||||    
T  9963446 attgttatatgcaggggttgg----ggttcgaacttcggaccccccacttattcaccttataaa--gtgaattctaaccactagg 9963524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 445 - 481
Target Start/End: Complemental strand, 16452716 - 16452680
Alignment:
Q  445 cttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  16452716 cttatttacctttaaaaatgtgaattctaatcactag 16452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 373 - 482
Target Start/End: Complemental strand, 40250267 - 40250162
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattct 472  Q
    ||||||| ||||||||| | |||| ||||||||||||||| || ||    |||| |||||||  |||| | |||||||| | || ||||| | |||||||    
T  40250267 catagctcagttggcagtaacatgcattgttatatgcaggagtcgg----ggttcgaacctcgaacaccctacttattctcattgaaaaaagagaattct 40250172  T
Q  473 aatcactagg 482  Q
    ||||||||||    
T  40250171 aatcactagg 40250162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 425 - 491
Target Start/End: Original strand, 30737034 - 30737100
Alignment:
Q  425 tttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactaggttatttgaa 491  Q
    ||||||| || ||||  |||||||||||||||||||||||||||||||| |||||||| || |||||    
T  30737034 tttgaacttcggacatcccacttattcaccttaaaaaatgtgaattctagtcactaggctacttgaa 30737100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 473
Target Start/End: Original strand, 16310053 - 16310101
Alignment:
Q  425 tttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||||||||    
T  16310053 tttgaacctctgacactccacttatttaccttgaaaaaggtgaattcta 16310101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 437 - 480
Target Start/End: Original strand, 17896883 - 17896926
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||| ||||||||||||||||||||||||||||||||| |||||    
T  17896883 acaccccacttattcaccttaaaaaatgtgaattctaaccacta 17896926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 473
Target Start/End: Original strand, 34107279 - 34107375
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattct 472  Q
    ||||||| |||||||||   |||||||  ||||||||||||||||    ||||| ||||  | ||||| ||||||||||||||| |||||||||||||||    
T  34107279 catagctcagttggcagggacatgtataattatatgcaggggttg----aggttcgaactccagacaccccacttattcaccttgaaaaatgtgaattct 34107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 473
Target Start/End: Original strand, 37516015 - 37516091
Alignment:
Q  393 catgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    |||||||||||||||| |||||||||    |||| |||||||  |||||| | |||||||||||||||||| |||||||||    
T  37516015 catgtattgttatatgtaggggttgg----ggttcgaacctcgaacactctatttattcaccttaaaaaatatgaattcta 37516091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 35352435 - 35352390
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||| ||||||||||||||| |||||||||||||||| |||||||    
T  35352435 gacaccccacttattcaccttgaaaaatgtgaattctagtcactag 35352390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 470
Target Start/End: Original strand, 18065259 - 18065352
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaatt 470  Q
    ||||||| |||||| ||| ||||| ||||||||||||||||||    ||||||| ||||| |  ||||   ||||||||||||| |||||||||||||    
T  18065259 catagctcagttggtagaggcatgcattgttatatgcaggggt----tgaggttcgaaccccgaacaccttacttattcaccttgaaaaatgtgaatt 18065352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 443 - 490
Target Start/End: Original strand, 18089800 - 18089847
Alignment:
Q  443 cacttattcaccttaaaaaatgtgaattctaatcactaggttatttga 490  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| ||||    
T  18089800 cacttattcaccttgaaaaacgtgaattctagtcactaggttaattga 18089847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 474
Target Start/End: Original strand, 2057543 - 2057581
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  2057543 gacaccccacttattcaccttaaaaaaggtgaattctaa 2057581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 480
Target Start/End: Complemental strand, 44487792 - 44487754
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  44487792 ccacttattcaccttaaaaaaggtgaattctaaccacta 44487754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 473
Target Start/End: Complemental strand, 22014699 - 22014646
Alignment:
Q  420 tgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||||| ||||| | ||||| ||||||||| ||||| ||||||||||||||||    
T  22014699 tgaggttcgaaccccagacaccccacttatttaccttgaaaaatgtgaattcta 22014646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 474
Target Start/End: Complemental strand, 2971166 - 2971134
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||||||||||||||||||| |||||||||||    
T  2971166 ccacttattcaccttaaaaaaggtgaattctaa 2971134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 474
Target Start/End: Complemental strand, 34644510 - 34644478
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaattctaa 474  Q
    |||||||||||||||||||| ||||||||||||    
T  34644510 ccacttattcaccttaaaaattgtgaattctaa 34644478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000005; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 492
Target Start/End: Original strand, 40160780 - 40160855
Alignment:
Q  417 ggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactaggttatttgaag 492  Q
    ||||| |||||||||| | ||||| ||||||||||||||| ||||| ||||||||||  ||||||| || ||||||    
T  40160780 ggctggggtttgaaccccggacaccccacttattcacctttaaaaaggtgaattctagccactaggctacttgaag 40160855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 473
Target Start/End: Original strand, 16985071 - 16985121
Alignment:
Q  423 ggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||||||||||  ||||||||||||||||| |||||||| ||||||||||    
T  16985071 ggtttgaacctcgaacactccacttattcactttaaaaaaagtgaattcta 16985121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 23025945 - 23025999
Alignment:
Q  420 tgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||||||||||| | ||||| |||||||||||| |||||||| |||||||||||    
T  23025945 tgaggtttgaaccccagacaccccacttattcactttaaaaaaggtgaattctaa 23025999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 477
Target Start/End: Original strand, 17262264 - 17262324
Alignment:
Q  417 ggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatca 477  Q
    |||||||||| ||| | | ||||| ||||||||||||||| ||||| ||||||||||||||    
T  17262264 ggctgaggttcgaatcccggacaccccacttattcaccttgaaaaaggtgaattctaatca 17262324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 482
Target Start/End: Original strand, 19137624 - 19137729
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattct 472  Q
    ||||||| ||||||||| | |||| |||||||||||||||    ||| |||||| ||||| | ||||| ||| |||||| |||| ||||| | |||||||    
T  19137624 catagctcagttggcaggaacatgcattgttatatgcagg----ggccgaggttcgaaccccagacaccccatttattctccttgaaaaaagagaattct 19137719  T
Q  473 aatcactagg 482  Q
    | ||||||||    
T  19137720 agtcactagg 19137729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 482
Target Start/End: Original strand, 50724401 - 50724475
Alignment:
Q  402 ttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactagg 482  Q
    |||||||||||||||||    |||| ||||||| ||||| ||||||||||||||||||||  ||||||||||  |||||||    
T  50724401 ttatatgcaggggttgg----ggttcgaacctcggacaccccacttattcaccttaaaaa--gtgaattctagccactagg 50724475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 482
Target Start/End: Complemental strand, 50788447 - 50788373
Alignment:
Q  402 ttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactagg 482  Q
    |||||||||||||||||    |||| ||||||| ||||| ||||||||||||||||||||  ||||||||||  |||||||    
T  50788447 ttatatgcaggggttgg----ggttcgaacctcggacaccccacttattcaccttaaaaa--gtgaattctagccactagg 50788373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 373 - 415
Target Start/End: Original strand, 43911619 - 43911661
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggt 415  Q
    ||||||||||||||||||  ||| |||||||||||||||||||    
T  43911619 catagcttagttggcagagacatatattgttatatgcaggggt 43911661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 474
Target Start/End: Original strand, 28951931 - 28951968
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  28951931 acaccccacttattcaccttgaaaaatgtgaattctaa 28951968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 42665956 - 42665911
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactag 481  Q
    ||||| ||||||||||||||| |||||  |||||||||||||||||    
T  42665956 gacaccccacttattcaccttgaaaaaaatgaattctaatcactag 42665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 437 - 470
Target Start/End: Original strand, 43911671 - 43911704
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaatt 470  Q
    |||||||||||||||||||| |||||||||||||    
T  43911671 acactccacttattcaccttgaaaaatgtgaatt 43911704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 427 - 480
Target Start/End: Original strand, 47497133 - 47497186
Alignment:
Q  427 tgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    |||||| | ||||| ||||||||||||||||||||| ||||||| ||| |||||    
T  47497133 tgaaccccagacaccccacttattcaccttaaaaaaggtgaattttaaccacta 47497186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 393 - 474
Target Start/End: Complemental strand, 4045704 - 4045627
Alignment:
Q  393 catgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    |||| ||||||||||||||||||     |||||| |||| || ||||| ||||||||||| ||| ||||| |||||||||||    
T  4045704 catgcattgttatatgcaggggt----cgaggttcgaacttcggacaccccacttattcatcttgaaaaaggtgaattctaa 4045627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 444 - 480
Target Start/End: Complemental strand, 5164176 - 5164140
Alignment:
Q  444 acttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  5164176 acttattgaccttgaaaaatgtgaattctaatcacta 5164140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 474
Target Start/End: Original strand, 33533273 - 33533305
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||||||||||||||||||| |||||||||||    
T  33533273 ccacttattcaccttaaaaaaagtgaattctaa 33533305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 437 - 473
Target Start/End: Original strand, 38507711 - 38507747
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattcta 473  Q
    |||| |||||||||||||||||||||| |||||||||    
T  38507711 acaccccacttattcaccttaaaaaatctgaattcta 38507747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 474
Target Start/End: Original strand, 16814700 - 16814799
Alignment:
Q  371 aacatagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaatt 470  Q
    ||||||||| ||||||||  | |||| ||| ||||||| |||||| ||    |||| ||||| | |||||||||||||||||| || |||||||||||||    
T  16814700 aacatagctcagttggcaagaacatgcattattatatgtaggggtcgg----ggttcgaaccccagacactccacttattcactttgaaaaatgtgaatt 16814795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 374 - 473
Target Start/End: Complemental strand, 32309237 - 32309142
Alignment:
Q  374 atagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||||| ||||||||   |||| |||||||||||||||||| ||     ||| ||| ||| ||||| ||| ||||||||||||||||||||||||||||    
T  32309237 atagcttggttggcagggacatgcattgttatatgcaggggtcgga----gttcgaatctcagacaccccagttattcaccttaaaaaatgtgaattcta 32309142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 398 - 492
Target Start/End: Complemental strand, 33236332 - 33236242
Alignment:
Q  398 attgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcactaggttatttgaag 492  Q
    |||||||||||||||||||||    |||| ||||  | ||||| | |||||||||| ||||||| |||||||||||| ||||||  |||||||||    
T  33236332 attgttatatgcaggggttgg----ggttcgaacaacagacaccctacttattcactttaaaaattgtgaattctaaccactagactatttgaag 33236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 490
Target Start/End: Original strand, 44409265 - 44409318
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattctaatcactaggttatttga 490  Q
    |||| ||||||||||||||| ||||| ||||||||||| |||||||||| ||||    
T  44409265 acaccccacttattcaccttgaaaaaggtgaattctaaccactaggttacttga 44409318  T

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Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 470
Target Start/End: Complemental strand, 7392396 - 7392303
Alignment:
Q  373 catagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaatt 470  Q
    ||||||| | ||||||| | |||| |||||||||||||| ||||||    |||||||||| |  |||| ||||||||||||||| |||||| ||||||    
T  7392396 catagctcaattggcaggaacatgcattgttatatgcagaggttgg----ggtttgaaccccgaacaccccacttattcaccttgaaaaatatgaatt 7392303  T

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Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 442 - 474
Target Start/End: Original strand, 41000830 - 41000862
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaattctaa 474  Q
    |||||||||||||||||||||||||||||||||    
T  41000830 ccacttattcaccttaaaaaatgtgaattctaa 41000862  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 381 - 473
Target Start/End: Original strand, 43635601 - 43635689
Alignment:
Q  381 agttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||||||||| |||| |||||||||||||| ||| ||    |||| ||||| | ||||| |||||||||||||||| |||  ||||||||||    
T  43635601 agttggcagaaacatgcattgttatatgcagcggtcgg----ggttcgaaccccggacaccccacttattcaccttacaaagggtgaattcta 43635689  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 474
Target Start/End: Complemental strand, 28555882 - 28555844
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaa 474  Q
    ||||||||||||||||||||||||||| || ||||||||    
T  28555882 gacactccacttattcaccttaaaaaaggtaaattctaa 28555844  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 474
Target Start/End: Original strand, 11808063 - 11808141
Alignment:
Q  393 catgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcacctta-aaaaatgtgaattctaa 474  Q
    |||| |||||||||||||||||| ||    |||| ||||| | ||||| |||||||||||||||| ||||| |||||||||||    
T  11808063 catgcattgttatatgcaggggtcgg----ggttcgaaccccggacaccccacttattcaccttagaaaaacgtgaattctaa 11808141  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 473
Target Start/End: Complemental strand, 42976631 - 42976594
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  42976631 gacactccacttattcactttaaaaaaggtgaattcta 42976594  T

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Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 442 - 470
Target Start/End: Original strand, 11651118 - 11651146
Alignment:
Q  442 ccacttattcaccttaaaaaatgtgaatt 470  Q
    |||||||||||||||||||||||||||||    
T  11651118 ccacttattcaccttaaaaaatgtgaatt 11651146  T

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Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 480
Target Start/End: Original strand, 18660684 - 18660736
Alignment:
Q  428 gaacctctgacactccacttattcaccttaaaaaatgtgaattctaatcacta 480  Q
    ||||||| ||| ||||||||||||||||||||||  ||||||| ||| |||||    
T  18660684 gaacctcagaccctccacttattcaccttaaaaatggtgaattttaaccacta 18660736  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 437 - 482
Target Start/End: Original strand, 440464 - 440509
Alignment:
Q  437 acactccacttattcaccttaaaaaatgtgaattctaatcactagg 482  Q
    |||| ||||||||||||||||||||| ||||||||||| |||||||    
T  440464 acaccccacttattcaccttaaaaaaggtgaattctaaccactagg 440509  T

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Target: scaffold0118 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 436 - 490
Target Start/End: Complemental strand, 37359 - 37305
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaattctaatcactaggttatttga 490  Q
    ||||| ||||||||||||||||||||||||||| | ||  ||||||| |||||||    
T  37359 gacaccccacttattcaccttaaaaaatgtgaaatttagccactaggctatttga 37305  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 473
Target Start/End: Original strand, 62720 - 62814
Alignment:
Q  375 tagcttagttggcagaagcatgtattgttatatgcaggggttggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||| |||||||| || |||||||| ||||||  |||||||||    |||| |||| || ||||  ||||||||||| ||||||||| ||||||||||    
T  62720 tagctgagttggcacaaacatgtattattatatataggggttgg----ggttcgaacatcggacaacccacttattcatcttaaaaaaagtgaattcta 62814  T

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Target: scaffold0126 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 436 - 468
Target Start/End: Complemental strand, 22881 - 22849
Alignment:
Q  436 gacactccacttattcaccttaaaaaatgtgaa 468  Q
    ||||| |||||||||||||||||||||||||||    
T  22881 gacaccccacttattcaccttaaaaaatgtgaa 22849  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 473
Target Start/End: Original strand, 1084 - 1140
Alignment:
Q  417 ggctgaggtttgaacctctgacactccacttattcaccttaaaaaatgtgaattcta 473  Q
    ||||| |||| ||||| | ||||| ||||||||||||||| ||||| ||||||||||    
T  1084 ggctggggttcgaaccccagacaccccacttattcaccttgaaaaaggtgaattcta 1140  T

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