View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15907_high_8 (Length: 256)
Name: NF15907_high_8
Description: NF15907
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15907_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 246
Target Start/End: Complemental strand, 52151513 - 52151282
Alignment:
| Q |
18 |
gttagccaaccttaaagcttcggtgtctcgt--tctcaaagccaaatatttggt-aagggatcatttttggatatacctttgggtcacaatccaaattat |
114 |
Q |
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| T |
52151513 |
gttagccaacgttaaagcttcggtttctcgtgttctcaaagccaaatattttgttaagggatcattcttggatatacctttgggtcacaatccaaattat |
52151414 |
T |
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| Q |
115 |
ttatgaaggaacatttgaagttctcaatttcggaagagaattggacatgaaaattgaaaaggtctagttatgaggctcataggtccacttatgtcttgtt |
214 |
Q |
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| T |
52151413 |
ttatgaaggaacatttgaagttctcaatttcggaagagaattggacatgaaaattgaaaaggtctagttatgaggctcataggtccacttatgtcttgtt |
52151314 |
T |
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| Q |
215 |
ttgataatctgagggtacacaacattttcata |
246 |
Q |
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| T |
52151313 |
ttgataatctcagggtacacaacattttcata |
52151282 |
T |
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