View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15908_high_1 (Length: 638)

Name: NF15908_high_1
Description: NF15908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15908_high_1
NF15908_high_1
[»] chr1 (12 HSPs)
chr1 (16-380)||(44146637-44146999)
chr1 (386-540)||(44147102-44147256)
chr1 (149-341)||(44783379-44783570)
chr1 (226-341)||(44793576-44793691)
chr1 (226-341)||(44614878-44614993)
chr1 (19-78)||(44614335-44614394)
chr1 (16-78)||(44784070-44784132)
chr1 (386-493)||(44130378-44130478)
chr1 (226-302)||(44789760-44789836)
chr1 (588-631)||(44147291-44147334)
chr1 (16-70)||(35900767-35900821)
chr1 (551-595)||(37351454-37351498)
[»] chr3 (4 HSPs)
chr3 (19-78)||(26729949-26730008)
chr3 (551-595)||(48977540-48977584)
chr3 (551-595)||(50731238-50731282)
chr3 (551-595)||(50781572-50781616)
[»] chr2 (4 HSPs)
chr2 (16-78)||(29227253-29227315)
chr2 (16-78)||(29340552-29340614)
chr2 (551-595)||(14486977-14487021)
chr2 (551-595)||(28194139-28194183)
[»] scaffold0061 (1 HSPs)
scaffold0061 (19-78)||(27529-27588)
[»] scaffold0017 (2 HSPs)
scaffold0017 (19-78)||(171204-171263)
scaffold0017 (19-81)||(182291-182353)
[»] chr5 (6 HSPs)
chr5 (21-73)||(29505908-29505960)
chr5 (226-268)||(29505176-29505218)
chr5 (551-595)||(10837448-10837492)
chr5 (551-595)||(4603929-4603973)
chr5 (551-595)||(19145413-19145457)
chr5 (551-595)||(32059441-32059485)
[»] scaffold0160 (1 HSPs)
scaffold0160 (551-595)||(29144-29188)
[»] scaffold0049 (1 HSPs)
scaffold0049 (551-595)||(66906-66950)
[»] chr7 (2 HSPs)
chr7 (551-595)||(2344455-2344499)
chr7 (551-595)||(21574103-21574147)
[»] chr4 (1 HSPs)
chr4 (551-591)||(24273378-24273418)


Alignment Details
Target: chr1 (Bit Score: 308; Significance: 1e-173; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 16 - 380
Target Start/End: Original strand, 44146637 - 44146999
Alignment:
Q  16 gacaattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttcattcactaaaattgtactgctgctttgatgttgtttc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44146637 gacaattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttcattcactaaaattgtactgctgctttgatgttgtttc 44146736  T
Q  116 taagcactaaaactaatacttatttttgcaggatgtatgggatgattacatcttttgctgttatagactaatgttgattggtcagcagtgtttgattgtg 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  44146737 taagcactaaaactaatacttatttttgcaggatgtatgggatgattacattgtttgcagttatagactaatgttgattggtcagcagtgtttgattgtg 44146836  T
Q  216 nnnnnnnnctgctttcaatttcaaggttgacagtttttgtatggaaatcttctaccatcgagctaataatgtaatagatggagttttgttaaaattttag 315  Q
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  44146837 -tttttttctgctttcaatttcaaggttgacagtttttgtatggaaatcttctgccatcgagttaataatgtaatagatggagttttgttaaaattttag 44146935  T
Q  316 tgcttgactgtgttttgttatggctttctgttatcgagttaataatatagtgctttgccaacttt 380  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44146936 tgcttgactgtgttttgttatggc-ttctgttatcgagttaataatatagtgctttgccaacttt 44146999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 386 - 540
Target Start/End: Original strand, 44147102 - 44147256
Alignment:
Q  386 atgcagaatagatttatagccactcaaattttctaatattctctattccctattccttatcatcaaatgaatgttcttttatcactcaacgcaaacgtat 485  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44147102 atgcagaatagatttatagccactcaaattttctaatattccctattccctattccttatcatcaaatgaatgttcttttatcactcaacgcaaacgtat 44147201  T
Q  486 tcaaaaggcttccattaaatcttcagttgttcacgctaatgaaattgaaaatctt 540  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44147202 tcaaaaggcttccattaaatcttcagttgttcatgctaatgaaattgaaaatctt 44147256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 149 - 341
Target Start/End: Complemental strand, 44783570 - 44783379
Alignment:
Q  149 tgtatgggatgattacatcttttgctgttatagactaatgttgattggtcagcagtgtttgattgtgnnnnnnnnctgctttcaatttcaaggttgacag 248  Q
    ||||||||| ||||||||   ||||||||||||| |||||| ||||| |  ||||||||||||||||        || |||||||||||||| |||        
T  44783570 tgtatgggaggattacattgcttgctgttatagaataatgtagattgattcgcagtgtttgattgtgttttttt-ctactttcaatttcaagtttggtga 44783472  T
Q  249 tttttgtatggaaatcttctaccatcgagctaataatgtaatagatggagttttgttaaaattttagtgcttgactgtgttttgttatggctt 341  Q
    ||||||||| |||||||||| | |||||| ||||||||||||| ||||| || |||||||| |||||||  |||||  |||||||||||||||    
T  44783471 tttttgtattgaaatcttctgctatcgagttaataatgtaataaatggacttctgttaaaactttagtgtgtgactaggttttgttatggctt 44783379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 226 - 341
Target Start/End: Complemental strand, 44793691 - 44793576
Alignment:
Q  226 gctttcaatttcaaggttgacagtttttgtatggaaatcttctaccatcgagctaataatgtaatagatggagttttgttaaaattttagtgcttgactg 325  Q
    ||||||||||||||  |||| |||||||||||||||||||||| | |||  | || |||||||||| ||||| ||||||||||| |||||||  ||| ||    
T  44793691 gctttcaatttcaattttgagagtttttgtatggaaatcttctgctatcatgttattaatgtaataaatggaattttgttaaaactttagtgtgtgattg 44793592  T
Q  326 tgttttgttatggctt 341  Q
    ||||||||||||||||    
T  44793591 tgttttgttatggctt 44793576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 226 - 341
Target Start/End: Original strand, 44614878 - 44614993
Alignment:
Q  226 gctttcaatttcaaggttgacagtttttgtatggaaatcttctaccatcgagctaataatgtaatagatggagttttgttaaaattttagtgcttgactg 325  Q
    ||||| ||||||||  |||| |||||||||||||||||||||| | |||  | || |||||||||| ||||| ||||||||||| |||||||  ||| ||    
T  44614878 gcttttaatttcaattttgagagtttttgtatggaaatcttctgctatcatgttattaatgtaataaatggaattttgttaaaactttagtgtgtgattg 44614977  T
Q  326 tgttttgttatggctt 341  Q
    ||||||||||||||||    
T  44614978 tgttttgttatggctt 44614993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 44614335 - 44614394
Alignment:
Q  19 aattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttc 78  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||    
T  44614335 aattcaatatttttggaagcattatacatgagcatggggataggattcttcactggtttc 44614394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 44784132 - 44784070
Alignment:
Q  16 gacaattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttc 78  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||||||||||| |||||||||    
T  44784132 gacaattcagtatttttggaagcgttatacatgagcatggggataggattctttactagtttc 44784070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 386 - 493
Target Start/End: Original strand, 44130378 - 44130478
Alignment:
Q  386 atgcagaatagatttatagccactcaaattttctaatattctctattccctattccttatcatcaaatgaatgttcttttatcactcaacgcaaacgtat 485  Q
    |||||||||||| ||||||| |||||||||||||||       ||||||||||| | |  |||||||||| |||||||||| |||||||||||||| |||    
T  44130378 atgcagaatagacttatagcaactcaaattttctaa-------tattccctatttcatcacatcaaatgagtgttcttttaccactcaacgcaaacatat 44130470  T
Q  486 tcaaaagg 493  Q
    || |||||    
T  44130471 tctaaagg 44130478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 226 - 302
Target Start/End: Complemental strand, 44789836 - 44789760
Alignment:
Q  226 gctttcaatttcaaggttgacagtttttgtatggaaatcttctaccatcgagctaataatgtaatagatggagtttt 302  Q
    ||||||||||||||| ||||||||||||||||| ||||||||| | ||||||  | |||||||||| ||||| ||||    
T  44789836 gctttcaatttcaagtttgacagtttttgtatgaaaatcttctgctatcgagtgattaatgtaataaatggattttt 44789760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 588 - 631
Target Start/End: Original strand, 44147291 - 44147334
Alignment:
Q  588 gggaccaacttggacaatttcttttactttcatttttatctgtg 631  Q
    ||||||||||||||||||||||||||||||| ||||||||||||    
T  44147291 gggaccaacttggacaatttcttttactttcgtttttatctgtg 44147334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 70
Target Start/End: Original strand, 35900767 - 35900821
Alignment:
Q  16 gacaattcaatatttttagaagcattctacatgagcatggggataggattcttca 70  Q
    ||||||| ||||||||| |||||||| ||||||||   |||||||||||||||||    
T  35900767 gacaatttaatatttttggaagcattatacatgagtggggggataggattcttca 35900821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 37351454 - 37351498
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||    
T  37351454 aaactcggtatccgatccaaggaccgactaatccgaggggaccaa 37351498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 26729949 - 26730008
Alignment:
Q  19 aattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttc 78  Q
    |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||    
T  26729949 aattcaatatttttggaagctttatacatgagcatggggataggattcttcactagtttc 26730008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 48977584 - 48977540
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||    
T  48977584 aaactcggtatccgatccaaggaccgactaatccgaggggaccaa 48977540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 50731238 - 50731282
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||| | |||||||||| ||||||||    
T  50731238 aaactcggtatccgatccaaggatcgactaatctgaggggaccaa 50731282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 50781616 - 50781572
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||| | |||||||||| ||||||||    
T  50781616 aaactcggtatccgatccaaggatcgactaatctgaggggaccaa 50781572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 2e-17; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 29227315 - 29227253
Alignment:
Q  16 gacaattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttc 78  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||    
T  29227315 gacaattcaatatttctggaagcattctacatgagcatggggctaggattcttcactggtttc 29227253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 29340614 - 29340552
Alignment:
Q  16 gacaattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttc 78  Q
    ||||||||||||||| | |||||||||||||||||||||||| |||||||||||||| |||||    
T  29340614 gacaattcaatatttctggaagcattctacatgagcatggggctaggattcttcactggtttc 29340552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 14487021 - 14486977
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||    
T  14487021 aaactcggtatccgatccaaggaccgactaatccgaggggaccaa 14486977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 28194139 - 28194183
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| |||||||||| | ||||||    
T  28194139 aaactcggtatccgatccaaggaccgactaatctgacgagaccaa 28194183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 27588 - 27529
Alignment:
Q  19 aattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttc 78  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||    
T  27588 aattcaatattttttgaagcattatatatgagcatggggataggattcttcactggtttc 27529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 171204 - 171263
Alignment:
Q  19 aattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttc 78  Q
    |||||||||||||| |||||||| || ||||||||||||||||||||||||||| |||||    
T  171204 aattcaatattttttgaagcattatatatgagcatggggataggattcttcactggtttc 171263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 182291 - 182353
Alignment:
Q  19 aattcaatatttttagaagcattctacatgagcatggggataggattcttcactagtttcatt 81  Q
    |||||| ||||||| |||||||| || ||||||||||||||||||||||||||| ||||||||    
T  182291 aattcagtatttttggaagcattatatatgagcatggggataggattcttcactggtttcatt 182353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 29505960 - 29505908
Alignment:
Q  21 ttcaatatttttagaagcattctacatgagcatggggataggattcttcacta 73  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||||||||||    
T  29505960 ttcaatatttttggaagcattatacatgagcatggggctaggattcttcacta 29505908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 29505218 - 29505176
Alignment:
Q  226 gctttcaatttcaaggttgacagtttttgtatggaaatcttct 268  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  29505218 gctttcaatttcaagtttgacagtttttgtatggaaatcttct 29505176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 10837492 - 10837448
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||    
T  10837492 aaactcggtatccgatctaaggaccaactaatctgaggggaccaa 10837448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 4603973 - 4603929
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||    
T  4603973 aaactcggtatccgatccaaggaccgactaatccgaggggaccaa 4603929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 19145413 - 19145457
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| || ||||||||||| || ||||||||    
T  19145413 aaactcggtatccgatccaagaaccaactaatccgaggggaccaa 19145457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 32059441 - 32059485
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||    
T  32059441 aaactcggtatccgatccaaggaccgactaatccgaggggaccaa 32059485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 29144 - 29188
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||  |||||||||| ||||||||    
T  29144 aaactcggtatccgatccaaggactgactaatctgaggggaccaa 29188  T

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Target: scaffold0049 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 66950 - 66906
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||    
T  66950 aaactcggtatccgatccaaggaccgactaatccgaggggaccaa 66906  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000009; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Complemental strand, 2344499 - 2344455
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||    
T  2344499 aaactcggtatccgatccaaggaccgactaatccgaggggaccaa 2344455  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 595
Target Start/End: Original strand, 21574103 - 21574147
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatgggaccaa 595  Q
    |||||||||||||||||| |||||| ||||||| || ||||||||    
T  21574103 aaactcggtatccgatccaaggaccgactaatccgaggggaccaa 21574147  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 591
Target Start/End: Complemental strand, 24273418 - 24273378
Alignment:
Q  551 aaactcggtatccgatccgaggaccaactaatctgatggga 591  Q
    |||||||||||| ||||| |||||| |||||||||||||||    
T  24273418 aaactcggtatctgatccaaggaccgactaatctgatggga 24273378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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