View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15908_high_35 (Length: 239)
Name: NF15908_high_35
Description: NF15908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15908_high_35 |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 33327679 - 33327459
Alignment:
| Q |
1 |
cctttcaatttgagactacaaaacaacttcattaataggcgacaaaattcatctctaatacatgttaattgagtttgcatctcaaactcgaaaactagtt |
100 |
Q |
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||||||||||||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
33327679 |
cctttcaatttgagactacgaaacaacttcattaatagaccatgaaattcatctctaatacatgttaattgagtttacatctcaaactcgaaaactagtt |
33327580 |
T |
|
| Q |
101 |
caaaggttgaaggagtctaaacacatacatgtcacacatcttagaaatcatgacgatgtaagactccaatacacttcaacaagacctagctcatgcaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33327579 |
caaaggttgaaggagtctaaacacatacatgtcatacatcttagaaattatgacgatgtaagactccaatacacttcaacaagacctagctcatgcaatg |
33327480 |
T |
|
| Q |
201 |
caatctacatgaggagacttc |
221 |
Q |
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||||||||||||||||||||| |
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| T |
33327479 |
caatctacatgaggagacttc |
33327459 |
T |
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