View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15908_low_29 (Length: 279)
Name: NF15908_low_29
Description: NF15908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15908_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 23 - 269
Target Start/End: Original strand, 45283251 - 45283498
Alignment:
| Q |
23 |
aacaagggcacaaacgtcaaaa-ttgaaataaacaaaaaataatataagaagagtatcattgagaggaagagtgtgttagtgttacagccaactccaacc |
121 |
Q |
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| T |
45283251 |
aacaagggcacaaacgtcaaaaatttaaataaacaaaaaataatataagaagagtatcattgagaggaagagtgtgttagtgttacagccaactccaacc |
45283350 |
T |
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| Q |
122 |
atatcacttgaaaattccgaggaagaagaaccgaacgagaatgattcttataagctgtactccatgacaatttcatagcatagtattatccgtaatgcaa |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45283351 |
atatcacttgaaaattccgaggaagaagaaccgaacgagaatgattcttataagctgtactccatgacaatttcatagcatagtattatccgtaatgcaa |
45283450 |
T |
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| Q |
222 |
aactaattaaaacaacttcctaaacaattttcccatgttcatctcact |
269 |
Q |
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| T |
45283451 |
aactaattaaaacaacttcctaaacaattttcccatgttcatttcact |
45283498 |
T |
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