View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15908_low_45 (Length: 226)
Name: NF15908_low_45
Description: NF15908
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15908_low_45 |
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Alignment Details
Target: chr8 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 10330797 - 10330603
Alignment:
| Q |
18 |
aaaataacgggtagtgcttcttaaaagaaagtttggtgtttcccttttcagccttttctttattctttatagttgatttcctttcatgaatcccttcccc |
117 |
Q |
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| T |
10330797 |
aaaataacggatagtgcttcttaaaagaaagtttggtgtttcccttttcagccttttctttattctttatggttgatttcctttcatgaatcccttcccc |
10330698 |
T |
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| Q |
118 |
agctttaacgcattaaaata-annnnnnnncttatgcgtcnnnnnnnngtttgtttctttactattaatttttcttgtttgtcaaactaaagagt |
211 |
Q |
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| T |
10330697 |
agctttaacgcattaaaatattttttttttcttatgcgtctaaaaaaagtttgtttctttactattaatttttcttgtttgtcaaactaaagagt |
10330603 |
T |
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