View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1590_high_12 (Length: 478)
Name: NF1590_high_12
Description: NF1590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1590_high_12 |
 | |
|
| [»] scaffold0028 (1 HSPs) |
| | |
|
| [»] scaffold0012 (2 HSPs) |
| | |
|
| [»] scaffold0086 (2 HSPs) |
| | |
|
Alignment Details
Target: chr4 (Bit Score: 438; Significance: 0; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 22 - 467
Target Start/End: Complemental strand, 17894370 - 17893925
Alignment:
| Q |
22 |
gaattcttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatggga |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17894370 |
gaattcttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatggga |
17894271 |
T |
|
| Q |
122 |
caaaattattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcatta |
221 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17894270 |
caaaattattctagtgctaacataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcatta |
17894171 |
T |
|
| Q |
222 |
cttgtcgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgttt |
321 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17894170 |
cttgtcgttttctagtggcatagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgttt |
17894071 |
T |
|
| Q |
322 |
ctaagtcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttc |
421 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17894070 |
ctaagtcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttc |
17893971 |
T |
|
| Q |
422 |
atcaataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17893970 |
atcaataaaataaatctacttataaatttattctcatttgattcat |
17893925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 6668720 - 6669173
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatatt-atttagtacttctcatattcattaccatacactatagaaatgggacaaa |
125 |
Q |
| |
|
||||| ||||||||||||| |||| |||||||| ||||||||||||||| |||||| ||||||||||| ||| ||||| | |||| || | ||||| |
|
|
| T |
6668720 |
cttatggtaatcattaaaagctttcgaagcttacccatcaattttatatttatttagcacttctcatatctattttcatacgccataggaaagagacaat |
6668819 |
T |
|
| Q |
126 |
attattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttg |
225 |
Q |
| |
|
| |||| ||||||||| | ||||| || ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| | ||||||| |
|
|
| T |
6668820 |
aatattttagtgctaacagaactagcaagtaacttgt-ttttacccattgaaccttcttcatgggatctccaatcacaaaggttgggttcccgttacttg |
6668918 |
T |
|
| Q |
226 |
tcgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaa |
325 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| ||| ||||||||| |||||||||||||| ||| |||||||||| |||||||||||||| ||||| |
|
|
| T |
6668919 |
tcgttttctagtggcaaagtctcattttcctaactttcttcccaaggggttttatatacggatccgcaaaattcacaatcattgactaagacgtctctaa |
6669018 |
T |
|
| Q |
326 |
gt---caat---taacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggc------gttgcctactaagcgaca |
413 |
Q |
| |
|
| |||| | ||||| |||||||||||||||||| ||||||||||||||||||||||||| | ||||| | | |||| |||| |||||||| |
|
|
| T |
6669019 |
attcacaatcaattacctcttatttcatcaagtttataaaaataaactcggattacacaataaatttatacacgtctacttggttggctaccaagcgaca |
6669118 |
T |
|
| Q |
414 |
acatgttcatcaataaaataaatctacttata-aatttattctcatttgattcat |
467 |
Q |
| |
|
|| ||||||||||| | |||||||||| |||| | |||||| ||||| ||||||| |
|
|
| T |
6669119 |
acttgttcatcaatgagataaatctacatatagattttattttcattggattcat |
6669173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 27 - 383
Target Start/End: Complemental strand, 43291254 - 43290902
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| |||||||||||||| || | | |||| |||||||||||||||||||| || |||||| ||||| ||||||||| || || | ||||| | |
|
|
| T |
43291254 |
cttatggtaatcattaaaaatcttaacaacttatccatcaattttatattatttaacacatctcatc--cattatcatacactacaggaaagagacaaca |
43291157 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
||||| ||||||||| | |||||||| ||||||| | |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
43291156 |
ttattttagtgctaacagaactaacaagtaactttt-ttttacccattgaaccttcttcatgggatctccaatcacaaaggttgggttcccattacttgt |
43291058 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||| || || ||| |||||||||||||| | || ||||||||||||||||||||||| | |||||| |
|
|
| T |
43291057 |
cgttttctagtggcatagtctcgtttccctaaatttcttctcatggggttttatatacggatccacttaattcacaaatattgactaagacatctctaag |
43290958 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaa |
383 |
Q |
| |
|
|||||| ||||| ||||||||||||| |||| |||||||| |||||||||| |||| |
|
|
| T |
43290957 |
tcaatt-acctcttatttcatcaagtctataataataaacttggattacacactaaa |
43290902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 133 - 467
Target Start/End: Original strand, 8990001 - 8990331
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| |||||||||| || | |||| ||| ||||||||||||||||||||||||||| ||||| ||| ||||||||| ||| |||||||||||| |
|
|
| T |
8990001 |
tagtgctaacataactaacaagtgatttgttttt--cccattgaacctttttcatgggatctcaaatcataaaggttgggttcccatcacttgtcgtttt |
8990098 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaatt |
332 |
Q |
| |
|
| ||||||| |||| | || ||| |||||| || || |||| | |||| ||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8990099 |
cgagtggcatagtcccttt--ccttcgttttcttcccgtggtttttgtctacgaattcgttaaattcacaaatattgactaagacgtctctaagtcaatt |
8990196 |
T |
|
| Q |
333 |
aacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaataaaat |
432 |
Q |
| |
|
|| ||| |||||||||||||||||| || |||||||||||||||||||||||||||| || || |||||||||||||||||||| ||||| |||||||| |
|
|
| T |
8990197 |
aatctcgtatttcatcaagtttataaaagtaaactcggattacacaataaactaatagcagtcgatgcctactaagcgacaacatattcattaataaaat |
8990296 |
T |
|
| Q |
433 |
aaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||| || |||| ||||||||||||| ||||||| |
|
|
| T |
8990297 |
aaatttagctatagatttattctcattggattcat |
8990331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 133 - 392
Target Start/End: Complemental strand, 6805880 - 6805624
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| |||||||||| || |||||| |||| |||||||||||||||||||||||||||||||| ||| || | |||| ||| |||| | ||||| |
|
|
| T |
6805880 |
tagtgctaacataactaacaagtgacttgtttttt--ccattgaacctttttcatgggatctccaatcataaaggtagtgttcccatcacttattgtttt |
6805783 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaatt |
332 |
Q |
| |
|
| ||||||| |||| ||||| ||| |||||| || || |||| | |||| ||||| ||||||||||||||||||||||| ||| ||| | |||||| |
|
|
| T |
6805782 |
cgagtggcatagtcacattt-ccttctttttcttcccgaggtttttgtctacgaattcgttaaattcacaaatattgactaagccgtctcttaatcaatt |
6805684 |
T |
|
| Q |
333 |
aacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaa |
392 |
Q |
| |
|
|| |||||||||| || ||| |||| |||||||||| | || ||||||||| | |||||| |
|
|
| T |
6805683 |
aatctcatatttcgtcgagtatataaaaataaactcagttttcacaataaatttatacaa |
6805624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 143 - 224
Target Start/End: Original strand, 572646 - 572727
Alignment:
| Q |
143 |
ataactaacatgtaacttgtgttttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggttctcattactt |
224 |
Q |
| |
|
|||||||| | || |||||| |||||||||| |||||||| ||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
572646 |
ataactaataagtgacttgt-ttttacccatatgaaccttattcatgggatctccaatcacatatgttgggttcccatcactt |
572727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 213
Target Start/End: Complemental strand, 6685240 - 6685201
Alignment:
| Q |
174 |
tgaacctttttcatgggatctccaatcacaaatgttgggt |
213 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
6685240 |
tgaaccttattcatgggatctccaatcacaaaggttgggt |
6685201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 6661355 - 6661401
Alignment:
| Q |
166 |
ttacccat-tgaacctttttcatgggatctccaatcacaaatgttgg |
211 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
6661355 |
ttacccatatgaaccttattcatgggatctccaatcacaaaggttgg |
6661401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 6661540 - 6661576
Alignment:
| Q |
306 |
attgactaagacgtttctaagtcaattaacctcatat |
342 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
6661540 |
attgactaagacgtctctaagtcaatcaacctcatat |
6661576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 10938915 - 10939351
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||| || |||||| ||||| ||||||||||| ||| | ||||| | |
|
|
| T |
10938915 |
cttatggtaatcattaaaagcttttaaa-cttacccatcaattttatattatttagcacatctcatc--cattatcatacactataaaaaagagacaaca |
10939011 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
10939012 |
atattttagtgctaacataactaacaagtaacttgt-ttttacccattgaaccttcttcatgggatctccaatcacaaaggttgggttcccattacttgt |
10939110 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||||||||| |||||| |
|
|
| T |
10939111 |
cgttttcgagtggcagagtctcattttcctaaatttcttcccaaggggttttatatacggatccgttaaattcacaaatattgactaagacgtctctaag |
10939210 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaa |
426 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||| |||| ||||||||||||||||| |
|
|
| T |
10939211 |
tcaattaacctcatatttcatcaagtttatgaaaataaactcggattacataataaactaatacaagtcgttgtctattaagagacaacatgttcatcaa |
10939310 |
T |
|
| Q |
427 |
taaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
10939311 |
taagataaatctacttatagatttattctcattggattcat |
10939351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 10944777 - 10945213
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||| || |||||| ||||| ||||||||||| ||| | ||||| | |
|
|
| T |
10944777 |
cttatggtaatcattaaaagcttttaaa-cttacccatcaattttatattatttagcacatctcatc--cattatcatacactataaaaaagagacaaca |
10944873 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
|||| ||||||||| |||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
10944874 |
atattttagtgctaacataactaacaagtaacttgt-ttttacccattgaaccttcttcatgggatctccaatcacaaaggttgggttcccattacttgt |
10944972 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||||| ||||||||| |||||||||||||| || ||||||||||||||||||||||||||| |||||| |
|
|
| T |
10944973 |
cgttttcgagtggcagagtctcattttcctaaatttcttcccaaggggttttatatacggatccgttaaattcacaaatattgactaagacgtctctaag |
10945072 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaa |
426 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||| |||| ||||||||||||||||| |
|
|
| T |
10945073 |
tcaattaacctcatatttcatcaagtttatgaaaataaactcggattacataataaactaatacaagtcgttgtctattaagagacaacatgttcatcaa |
10945172 |
T |
|
| Q |
427 |
taaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||| ||||||||||||||| ||||||||| ||| ||||||| |
|
|
| T |
10945173 |
taagataaatctacttatagatttattcttattggattcat |
10945213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 164 - 467
Target Start/End: Original strand, 73389 - 73695
Alignment:
| Q |
164 |
ttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttttctagtggcaaagtctcatttccctaaatttt |
263 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
73389 |
ttttacccattgaacattcttcatgggatctccaatcacaaaggttaggttctcattacttgtcgttttctagtggcaaagtatcatttccctaaatttc |
73488 |
T |
|
| Q |
264 |
ctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaattaacctcatatttcatcaagtttatataaata |
363 |
Q |
| |
|
| ||||||| ||||||| ||| || ||||||||||||| |||||||||||||||| |||||||||||| ||||| ||||||||||||| |||| |||| |
|
|
| T |
73489 |
tttccaaggggttttatacacgaatccgctaaattcacagatattgactaagacgtctctaagtcaatt-acctcttatttcatcaagtctataataata |
73587 |
T |
|
| Q |
364 |
aactcggattacacaataaactaataca--aggcgt--tgcctactaagcgacaacatgttcatcaataaaataaatctacttataaatttattctcatt |
459 |
Q |
| |
|
|||| |||||||||| |||| | | ||| || | || ||||||| ||||| | | |||||| | || ||||||||||||||| ||||||||||||| |
|
|
| T |
73588 |
aacttggattacacactaaatttacacagcttgcttagtggctactaaacgacatcttattcatccacaagataaatctacttatagatttattctcatt |
73687 |
T |
|
| Q |
460 |
tgattcat |
467 |
Q |
| |
|
||||||| |
|
|
| T |
73688 |
ggattcat |
73695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 26969939 - 26970036
Alignment:
| Q |
134 |
agtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttttc |
233 |
Q |
| |
|
|||||||| | |||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
26969939 |
agtgctaacagaactaacaagtaacttgttttt--cccattgaaccttcttcatgggatctccaatcacaaaggttgggttaccattacttgtcgttttc |
26970036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 18737142 - 18737213
Alignment:
| Q |
396 |
gttgcctactaagcgacaacatgttcatcaataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||| ||||||| ||||||||| ||||||||||| |||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
18737142 |
gttgtctactaaacgacaacatattcatcaataagataaatttacttataaatttattctcattggattcat |
18737213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 14632313 - 14632411
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttt |
231 |
Q |
| |
|
||||||||| |||||||||| || |||||| ||| ||||| |||||||| |||||||||||||||||| ||||||||||||| || ||||||||||| |
|
|
| T |
14632313 |
tagtgctaaaataactaacaagtgacttgttttt--cccatatgaaccttcctcatgggatctccaatcataaatgttgggttccaatcacttgtcgttt |
14632410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 19433058 - 19433006
Alignment:
| Q |
164 |
ttttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19433058 |
ttttacccatatgaaccttattcatgggatctccaatcacaaatgttgggttc |
19433006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 403 - 466
Target Start/End: Complemental strand, 8365594 - 8365531
Alignment:
| Q |
403 |
actaagcgacaacatgttcatcaataaaataaatctacttataaatttattctcatttgattca |
466 |
Q |
| |
|
||||||||| | ||| ||||||||| | ||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
8365594 |
actaagcgaaatcatattcatcaatgagataaatctacttatagatttattctcattggattca |
8365531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 18736843 - 18736913
Alignment:
| Q |
145 |
aactaacatgtaacttgtgttttacc-cattgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
||||||||||| |||||| | ||||| ||||||||||| ||||||||||||||||||||||| |||| |||| |
|
|
| T |
18736843 |
aactaacatgtgacttgt-tcttaccacattgaaccttcttcatgggatctccaatcacaaaggttgagttc |
18736913 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 68912 - 68971
Alignment:
| Q |
33 |
gtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcat |
92 |
Q |
| |
|
||||||||||||| | ||||||||||| | ||||||||||||||||||| || |||||| |
|
|
| T |
68912 |
gtaatcattaaaagcctttaaagcttatccctcaattttatattatttagcacatctcat |
68971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 173
Target Start/End: Original strand, 9810497 - 9810645
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatat---tcattaccatacactatagaaatgggaca |
123 |
Q |
| |
|
||||| ||||||||||||| |||||| | || | |||||||||||||| |||| |||||| |||| | |||| ||||||| ||||||| | |||| |
|
|
| T |
9810497 |
cttatggtaatcattaaaagtctttaaaacatatccttcaattttatattaattagcacttcttatatccattattatcatacaccatagaaaagagaca |
9810596 |
T |
|
| Q |
124 |
aaattattctagtgctaatataactaacatgtaacttgtgttttacccat |
173 |
Q |
| |
|
||| ||| ||||||||| ||||||||| || |||||| |||||||||| |
|
|
| T |
9810597 |
taataattttagtgctaacgtaactaacaagtgacttgt-ttttacccat |
9810645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 52 - 467
Target Start/End: Complemental strand, 1968027 - 1967615
Alignment:
| Q |
52 |
aaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaattattctagtgctaatataactaac |
151 |
Q |
| |
|
||||||||| ||||||||||||||||||||| | |||||| ||||| |||||||||||| || | ||||| |||||| | ||||||| | ||||||| |
|
|
| T |
1968027 |
aaagcttacccatcaattttatattatttagcatatctcatc--cattatcatacactataggaaagagacaacattattttcgtgctaacagaactaac |
1967930 |
T |
|
| Q |
152 |
atgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttttctagtggcaaagtctcatt |
251 |
Q |
| |
|
| |||| |||| |||||||||||||||||| |||||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||| | |||||||| |
|
|
| T |
1967929 |
aagtaatttgt-ttttacccattgaaccttcttcatgggatctccaagcacaaaggttgggttcccattacttgtcgttttcgagtggctatgtctcatt |
1967831 |
T |
|
| Q |
252 |
tccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaattaacctcatatttcatcaag |
351 |
Q |
| |
|
||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
1967830 |
tccctaaatttcttcccaaggggttttatatacggatccgctaaattcacaaatattgactaagacgtctctaagtcaattaacctcatatttcatcaag |
1967731 |
T |
|
| Q |
352 |
tttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaataaaataaatctacttataaattta |
451 |
Q |
| |
|
||||| || |||||| ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
1967730 |
tttatgaaagtaaacttggattacacaataaactaatagaagtcgttgtctactaagcgacaacatgttcattaataaaataaatctacttatagattta |
1967631 |
T |
|
| Q |
452 |
ttctcatttgattcat |
467 |
Q |
| |
|
|||||||| ||||||| |
|
|
| T |
1967630 |
ttctcattggattcat |
1967615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 49388402 - 49388837
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||||| ||||||||||| | ||| |||||| ||||||| || |||||| ||||| ||||||| |||| || | ||||| |
|
|
| T |
49388402 |
cttatggtaatcattaaaaacctttaaagcttatccctcatttttat--tatttagcacatctcatc--cattatcatacacaataggaaagagacaacg |
49388497 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
|||| |||| |||| | |||||||| ||||||||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
49388498 |
ttatattagtactaacagaactaacaagtaacttgt-ttttacctattgaaccttcttcatgggatctccaatcacaaaggttgggttcccattacttgt |
49388596 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||||| ||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
49388597 |
cgttttcgagtggcagagtctcattttcctaaatttcttcccaaggggttttatatatggatccgctagattcacaaatattgactaagacgtttctaag |
49388696 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaa |
426 |
Q |
| |
|
|||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||| |
|
|
| T |
49388697 |
tcaattaacctcatattttatcaagtttatgaaaataaactcggattacataataaactaatacaagtcgttgtctattaagcgacaacatgttcatcaa |
49388796 |
T |
|
| Q |
427 |
taaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
49388797 |
taagataaatctacttatagatttattctcattggattcat |
49388837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 35 - 459
Target Start/End: Complemental strand, 24172317 - 24171888
Alignment:
| Q |
35 |
aatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaattattcta |
134 |
Q |
| |
|
||||||||||| | |||||||||||| | ||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||| ||| | |
|
|
| T |
24172317 |
aatcattaaaagcctttaaagcttacccctcaattttatattatttagcacttctcatattcattatgatacaccatagaaatgggacaaaatcatttaa |
24172218 |
T |
|
| Q |
135 |
gtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttttct |
234 |
Q |
| |
|
||||||| |||||||||| |||| |||| |||||||| || |||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
24172217 |
gtgctaacataactaaca-gtaatttgt-ttttacccgttaaaccttcttcatgggatctccaatcacaaaggttgggtttccattacttgtcgttttct |
24172120 |
T |
|
| Q |
235 |
agtggcaaagtctcatttccctaaattttctcccaag-ggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaatta |
333 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||| |
|
|
| T |
24172119 |
agtggcgtagtctcatttccctaaattttctcccaagaggattttatatacggatccgctaaattcataaatattgactaagacgtctctaagtcaatta |
24172020 |
T |
|
| Q |
334 |
acctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggc------gttgcctactaagcgacaacatgttcatcaat |
427 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||| |||||||| ||||| | ||| ||| | |||| |||||||||||||| | |||||||| |
|
|
| T |
24172019 |
acctcatatttcatcaagtctataaaaataaacttggattacatgataaatttatataagtctgcttagttgtttactaagcgacaacttagtcatcaat |
24171920 |
T |
|
| Q |
428 |
aaaataaatctacttataaatttattctcatt |
459 |
Q |
| |
|
|| |||||||||||| |||||||||||||||| |
|
|
| T |
24171919 |
aagataaatctacttgtaaatttattctcatt |
24171888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 38826317 - 38826754
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| |||||||||||| |||| ||| |||| | ||||||||||||||||||| || |||||| ||||| |||||||||||| || |||| | |
|
|
| T |
38826317 |
cttatggtaatcattaaagtctttaaaa-cttatccctcaattttatattatttagcacatctcatc--cattatcatacactataggaaacatacaaca |
38826413 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
||||| ||||||||||| |||||||| ||||||||| ||||||||||||||| || ||||||||||||||||| ||||| ||||||||| |||||||||| |
|
|
| T |
38826414 |
ttattttagtgctaatagaactaacaagtaacttgt-ttttacccattgaacgttcttcatgggatctccaattacaaaggttgggttcccattacttgt |
38826512 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctccca--agggattttatatacggattcgctaaattcacaaatattgactaagacgtttcta |
324 |
Q |
| |
|
||||||| | |||| ||||||||||||| |||||| ||||| ||| | ||||||||||| | || ||||||||||||||||| ||||||| |||| |
|
|
| T |
38826513 |
cgttttcgaatggcgtagtctcatttccc-aaatttcttcccaataggttgtatatatacggatccacttaattcacaaatattgaccaagacgtctcta |
38826611 |
T |
|
| Q |
325 |
agtcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatc |
424 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | ||| ||||||| ||||| ||||||||| |
|
|
| T |
38826612 |
agtcaattaacctcatatttcatcaagtttataaaaataaactcgaattacacaataaactaatacaagtcattgtctactaaatgacaatatgttcatc |
38826711 |
T |
|
| Q |
425 |
aataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||||| |||||||||| |||| ||||||||||||| ||||||| |
|
|
| T |
38826712 |
aataagataaatctacctatagatttattctcattggattcat |
38826754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 47325090 - 47325010
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
||||||||| |||||||||| || |||||| |||| |||||||||||||||||||||||||||||||| ||| |||||||| |
|
|
| T |
47325090 |
tagtgctaacataactaacaagtgacttgtttttt--ccattgaacctttttcatgggatctccaatcataaagattgggttc |
47325010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 24042443 - 24042880
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||| | ||||||| ||| | ||||||||||||||||||| || |||||| ||||| ||||||| |||| || | ||||| |
|
|
| T |
24042443 |
cttatggtaatcattaaaagcctttaaagtttatccctcaattttatattatttagcacatctcatc--cattatcatacaccataggaaagagacaacg |
24042540 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
|||| ||||||| | | |||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
24042541 |
ttatattagtgctcacagaactaacaagtaacttgt-ttttacccattgaaccttcttcatgggatctccaatcacaaaggttgggtttccattacttgt |
24042639 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||| ||||||| | |||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| |
|
|
| T |
24042640 |
cgttttcgagtggcagaatctcattttcctaaatttcttcccaagggtttttatatacggatccgctaaattcacaaatattgactaagacgtctctaag |
24042739 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaa |
426 |
Q |
| |
|
|||||||||||| ||||||||||||||||| ||||||||| |||||||| |||||||||||||||| ||||| ||| |||||||||||||||||||||| |
|
|
| T |
24042740 |
tcaattaacctcgtatttcatcaagtttatgaaaataaacttggattacataataaactaatacaagtcgttgtctattaagcgacaacatgttcatcaa |
24042839 |
T |
|
| Q |
427 |
taaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
24042840 |
taagataaatctacttatagatttattctcattggattcat |
24042880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 6950614 - 6951051
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||| |||||||| |||||||||||| || |||||| ||||| |||||||||||| || | ||||| | |
|
|
| T |
6950614 |
cttatcataatcattaaaagcttttaaagcttacccatcaattatatattatttagcacatctcatc--cattatcatacactataggaaagagacaata |
6950711 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
||||| | ||||| | | |||||||| |||| |||| |||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
6950712 |
ttattttcgtgcttacagaactaacaagtaatttgt-ttttacccattgaaccttcttcatgggatctccaatcacaacggttgggttcctattacttgt |
6950810 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||| |||||| | ||||||||||||||||||| || |||||| |||||||||||||| | || |||||||||| |||||||||||||| |||||| |
|
|
| T |
6950811 |
cgttttcgagtggctatgtctcatttccctaaatttcttcacaaggggttttatatacggatccacttaattcacaaaaattgactaagacgtctctaag |
6950910 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaa |
426 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||| |||||||||| |||||||||| ||||||||| ||||| || |||||||||||||||||||||| |
|
|
| T |
6950911 |
tcaattaaactcatatttcatcaagtttataaaaacaaactcggatcacacaataaattaatacaagtcgttgtttattaagcgacaacatgttcatcaa |
6951010 |
T |
|
| Q |
427 |
taaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||| ||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
6951011 |
taagataaatctacttatagatttattctcattggattcat |
6951051 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 27 - 467
Target Start/End: Complemental strand, 19975412 - 19974973
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||| || | |||||||| | ||||||||||||||||||| || | || | ||||| ||||| ||||| || | ||||| | |
|
|
| T |
19975412 |
cttatggtaatcattaaaagctct-aaagcttatccctcaattttatattatttagcacatgtcttc--cattatcatac--tataggaaagagacaaca |
19975318 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
||||| ||||||||| | ||||||| ||||||| | ||||||||||| |||||| |||||||||| |||||||||||| ||||||||| |||||||||| |
|
|
| T |
19975317 |
ttattttagtgctaacagcactaacaagtaacttat-ttttacccattaaaccttcttcatgggatatccaatcacaaaggttgggttcccattacttgt |
19975219 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatt-----tccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgttt |
321 |
Q |
| |
|
|||||| ||||||| ||||||||| ||||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||||||| | | |
|
|
| T |
19975218 |
cgtttttgagtggcatagtctcattatatttccctaaatttcttcccaaggggatttatataaagatccactaaattcacaaatattgactaagacatct |
19975119 |
T |
|
| Q |
322 |
ctaagtcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttc |
421 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||| ||||||||||||||||| ||| |
|
|
| T |
19975118 |
ctaagtcaattaaactcatatttcatcaagtttataaaaataaactcagattacataataaactaatacaagtcgttgtctactaagcgacaacatattc |
19975019 |
T |
|
| Q |
422 |
atcaataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
19975018 |
atcaataagataaatctacttatagatttattctcattggattcat |
19974973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 133 - 358
Target Start/End: Complemental strand, 27077375 - 27077153
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| |||||||||| | |||||| |||| ||||| |||||||||||||||||||||| ||| ||| |||||||| ||| |||||||||||| |
|
|
| T |
27077375 |
tagtgctaacataactaacaaatgacttgtttttt--ccattaaacctttttcatgggatctccattcataaaggttgggtttccatcacttgtcgtttt |
27077278 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaatt |
332 |
Q |
| |
|
| |||||| |||||||||| |||| |||||| | | || |||| | ||| ||||| |||||||||||||||||| |||||||| ||| | |||||| |
|
|
| T |
27077277 |
cgtgtggcatagtctcattt-cctactttttcttctcaaggtttttgtcaacgaattcgttaaattcacaaatattgattaagacgtctcttaatcaatt |
27077179 |
T |
|
| Q |
333 |
aacctcatatttcatcaagtttatat |
358 |
Q |
| |
|
|| || ||| ||| |||||| ||||| |
|
|
| T |
27077178 |
aatctaatacttcgtcaagtctatat |
27077153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 15515837 - 15515766
Alignment:
| Q |
396 |
gttgcctactaagcgacaacatgttcatcaataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||| |||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
15515837 |
gttgtctactaagcgacaacatatttatcaataagataaatttacttataaatttattctcattggattcat |
15515766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 34234332 - 34234261
Alignment:
| Q |
396 |
gttgcctactaagcgacaacatgttcatcaataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||| |||||||||||| |||| |||||||| || ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
34234332 |
gttgtctactaagcgacgacatattcatcaacaagataaatctacttataaatttattctcattggattcat |
34234261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 15516136 - 15516066
Alignment:
| Q |
145 |
aactaacatgtaacttgtgttttacc-cattgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
||||||||||| |||||| | ||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
15516136 |
aactaacatgtgacttgt-tcttaccacattgaaccttcttcatgggatctccaatcacaaaggttgggttc |
15516066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 215
Target Start/End: Complemental strand, 34234604 - 34234561
Alignment:
| Q |
172 |
attgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
34234604 |
attgaaccttcttcatgggatctccaatcacaaaggttgggttc |
34234561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 34096878 - 34096928
Alignment:
| Q |
166 |
ttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
34096878 |
ttacccatatgaaccttattcatgggatctccaatcacaaaggttgggttc |
34096928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 34097010 - 34097066
Alignment:
| Q |
284 |
cggattcgctaaattcacaaatattgactaagacgtttctaagtcaattaacctcat |
340 |
Q |
| |
|
||||| || |||||||||||||||||| |||||||||||| | |||| ||| ||||| |
|
|
| T |
34097010 |
cggatccgttaaattcacaaatattgattaagacgtttcttaatcaaataatctcat |
34097066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 222; Significance: 1e-122; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 19931036 - 19931473
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||| ||||||||| ||||||||||| | ||||||||||||||||||| || |||||| ||||| |||||||||||| || | ||||| | |
|
|
| T |
19931036 |
cttatggtattcattaaaagtatttaaagcttatccctcaattttatattatttagcacatctcatc--cattatcatacactataggaaagagacaaca |
19931133 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
| ||| || |||||| | ||||||| ||||||||| |||||||||||||||||| |||||||||| | |||||||||| ||||||||| || ||||||| |
|
|
| T |
19931134 |
taattttattgctaacagaactaactagtaacttgt-ttttacccattgaaccttcttcatgggatttgcaatcacaaaggttgggttcgcaatacttgt |
19931232 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||| ||||| |||||||||||||||||||||| | ||||||| |||||||||||||| |||| |||||||||| |||||||||||||| |||||| |
|
|
| T |
19931233 |
cgttttcgagtggtaaagtctcatttccctaaatttctttccaagggcttttatatacggatccgcttaattcacaaaaattgactaagacgtctctaag |
19931332 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaa |
426 |
Q |
| |
|
|||||||| |||||||||||||||||||||| | ||||||||||| |||||||||| ||||||||| ||||| ||| |||||||||||||||||||||| |
|
|
| T |
19931333 |
tcaattaaactcatatttcatcaagtttataatagtaaactcggatcacacaataaattaatacaagtcgttgtctattaagcgacaacatgttcatcaa |
19931432 |
T |
|
| Q |
427 |
taaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
19931433 |
taagataaatctacttataaatttattctcattggattcat |
19931473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 133 - 467
Target Start/End: Original strand, 42254580 - 42254912
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| | |||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||| |
|
|
| T |
42254580 |
tagtgctaacagaactaacaagtaacttgt-ttttacccattgaaccttcttcatgggatctccaatcacaaaggttgg-ttcccattacttgtcgtttt |
42254677 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaatt |
332 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||| |
|
|
| T |
42254678 |
cgagtggcaaagtctcatttccctaaatttcttcccaaggggttttatatacggatatgcttaattcacaaaaattgactaagacgtctctaagtcaatt |
42254777 |
T |
|
| Q |
333 |
aacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaataaaat |
432 |
Q |
| |
|
|| |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||||| || |
|
|
| T |
42254778 |
aaactcatatttcatcaagtttataaaaataaactcggatcacacaataaattaatacaagtcgttgtctattaagcgacaacatgttcatcaataagat |
42254877 |
T |
|
| Q |
433 |
aaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||| ||||||||| ||||||||||||| ||||||| |
|
|
| T |
42254878 |
aaaactacttatagatttattctcattggattcat |
42254912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 62 - 467
Target Start/End: Complemental strand, 14657257 - 14656851
Alignment:
| Q |
62 |
catcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaattattctagtgctaatataactaacatgtaacttg |
161 |
Q |
| |
|
||||||||||||||||||||| || |||||| ||||| |||||||||||| || | |||| |||||| ||||||||| | |||||||| |||||||| |
|
|
| T |
14657257 |
catcaattttatattatttagcacatctcatc--cattatcatacactataggaaagagacatcattattttagtgctaacaaaactaacaagtaacttg |
14657160 |
T |
|
| Q |
162 |
tgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttttctagtggcaaagtctcatttccctaaatt |
261 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
14657159 |
t-ttttacccattgaaccttcttcatgggatctccaatcacaaaggttgggttcccattacttgtcgttttcgagtggcaaagtctcatttccctaaatt |
14657061 |
T |
|
| Q |
262 |
ttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaattaacctcatatttcatcaagtttatataaa |
361 |
Q |
| |
|
| ||| ||||| |||||||||||||| |||| ||| ||||||||||||||||||| | |||||||||| | ||||| ||||||||||| | |||| || |
|
|
| T |
14657060 |
tcttcctaaggggttttatatacggatccgcttaatccacaaatattgactaagacatctctaagtcaaat-acctcttatttcatcaaatctataataa |
14656962 |
T |
|
| Q |
362 |
taaactcggattacacaataaactaatacaaggcg-----ttgcctactaagcgacaacatgttcatcaataaaataaatctacttataaatttattctc |
456 |
Q |
| |
|
|||||| |||||||||| |||| | | ||||| || || ||||||| ||||| | | ||||||| || |||||||||||||||||||||||||| |
|
|
| T |
14656961 |
taaacttggattacacattaaatttacacaagtcggcttagtggctactaaacgacatcttattcatcagcaagataaatctacttataaatttattctc |
14656862 |
T |
|
| Q |
457 |
atttgattcat |
467 |
Q |
| |
|
||| ||||||| |
|
|
| T |
14656861 |
attggattcat |
14656851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 27 - 233
Target Start/End: Original strand, 53727652 - 53727855
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||| | || |||||||| |||||||||||||| | |||| ||| |||| || || || ||||||| |||| || |||| ||| |
|
|
| T |
53727652 |
cttatggtaatcattaaaagccgtttaagcttacccatcaattttatataaattagcact-ctcacatccaatatcatacaccataggaaagggaagaaa |
53727750 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
|| ||||||||| | |||||||| ||||||||| ||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
53727751 |
aagttttagtgctaacagaactaacaagtaacttgttttt--cccattgaaccttcttcatgggatctccagtcacaaaggttgggttaccattacttgt |
53727848 |
T |
|
| Q |
227 |
cgttttc |
233 |
Q |
| |
|
||||||| |
|
|
| T |
53727849 |
cgttttc |
53727855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 358
Target Start/End: Complemental strand, 32895242 - 32895020
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| |||||||||| | |||||| ||| |||||| ||||| |||||||||||||||| ||| ||| |||||||| ||| |||||||||||| |
|
|
| T |
32895242 |
tagtgctaacataactaacaaatgacttgttttt--cccattaaacctatttcatgggatctccattcataaaggttgggtttccatcacttgtcgtttt |
32895145 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaatt |
332 |
Q |
| |
|
| |||||| |||||||||| |||| |||||| | || |||| | ||| ||||| |||||||||||||||||| |||||||| ||| | |||||| |
|
|
| T |
32895144 |
cgtgtggcatagtctcattt-cctaccttttcttctcgaggtttttgtcaacgaattcgttaaattcacaaatattgattaagacgtctcttaatcaatt |
32895046 |
T |
|
| Q |
333 |
aacctcatatttcatcaagtttatat |
358 |
Q |
| |
|
|| || ||| ||| |||||| ||||| |
|
|
| T |
32895045 |
aatctaatacttcgtcaagtctatat |
32895020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 467
Target Start/End: Original strand, 16364264 - 16364335
Alignment:
| Q |
396 |
gttgcctactaagcgacaacatgttcatcaataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||| ||||||||||||||||| || |||||||| |||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
16364264 |
gttgtctactaagcgacaacatatttatcaataagataaatttacttataaatttattctcattggattcat |
16364335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 11635205 - 11635288
Alignment:
| Q |
145 |
aactaacatgtaacttgtgttttacc-cattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcg |
228 |
Q |
| |
|
||||||||||| |||||| | ||||| ||||||||||| ||||||||||||| ||||||||| ||||||||| || |||||||| |
|
|
| T |
11635205 |
aactaacatgtgacttgt-tcttaccacattgaaccttcttcatgggatctcaaatcacaaaggttgggttcctatcacttgtcg |
11635288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 16363965 - 16364035
Alignment:
| Q |
145 |
aactaacatgtaacttgtgttttacc-cattgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
||||||||||| |||||| | ||||| ||||||||||| |||||||||||||||||||||| |||| |||| |
|
|
| T |
16363965 |
aactaacatgtgacttgt-tcttaccacattgaaccttcctcatgggatctccaatcacaaaggttgagttc |
16364035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 27 - 467
Target Start/End: Complemental strand, 13818361 - 13817925
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||||| || ||||||| | ||| |||||| ||||||| || |||||| ||||| |||||||||||| || | ||||| |
|
|
| T |
13818361 |
cttatggtaatcattaaaaacccttgaagcttaaccctcatttttat--tatttagcacatctcatc--cattatcatacactataggaaagagacaacg |
13818266 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggtt-ctcattacttg |
225 |
Q |
| |
|
|||| ||||||||| | |||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||| | |||| |||| |
|
|
| T |
13818265 |
ttatattagtgctaacagaactaacaagtaacttgt-ttttacccattataccttcttcatgggatctccaatcacaaaggttgggtttcccattgcttg |
13818167 |
T |
|
| Q |
226 |
tcgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaa |
325 |
Q |
| |
|
|||||||| ||||||| |||||||||| ||||||||| ||||||||| |||| || |||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
13818166 |
tcgttttcgagtggcagagtctcattttcctaaatttcttcccaaggggttttctacacggatccgctaaattcacaaatattgactaagacgtctctaa |
13818067 |
T |
|
| Q |
326 |
gtcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatca |
425 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||| |
|
|
| T |
13818066 |
gtcaattaacctcatatttcatcaagtttatgaaaataaactcgaattacataataaactaatacaagtcgttgtctattaagcgacaacatgttcatca |
13817967 |
T |
|
| Q |
426 |
ataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
13817966 |
ataagataaatctacttatagatttattctcattggattcat |
13817925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 27 - 467
Target Start/End: Original strand, 31207510 - 31207944
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||| | ||||||||||| | ||||||||||||||||||| || |||||| ||||| |||||||||||| || | ||||| | |
|
|
| T |
31207510 |
cttatggtaatcattaaaagcctttaaagcttatccctcaattttatattatttagcacatctcatc--cattatcatacactataggaaagagacaaca |
31207607 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
|||| ||||||| | | ||||| || |||||||| |||||||||||||||||| ||||||||||||||||||| || ||||||||| ||||||||| |
|
|
| T |
31207608 |
atattttagtgcttagagaactagcaagtaacttgc-ttttacccattgaaccttcttcatgggatctccaatcaataaggttgggttcccattacttgc |
31207706 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||||||||||| ||||||||||| |||| || ||||||||| |||||| || |||| |||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
31207707 |
cgttttctagtggcatggtctcatttccttaaaattcttcccaaggggttttatgtatggatccgcttaattcacaaatattgactaagacgtctctaag |
31207806 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaa |
426 |
Q |
| |
|
|||||||||||| ||||||||||||| |||| | |||||||||||||||| |||||| |||||||| ||||| ||||||| ||||| ||||||||||| |
|
|
| T |
31207807 |
tcaattaacctcgtatttcatcaagtctataaagataaactcggattacaaaataaattaatacaattcgttgtctactaaacgaca--atgttcatcaa |
31207904 |
T |
|
| Q |
427 |
taaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
||| |||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
31207905 |
taagataaatctacttat-gatttattctcattggattcat |
31207944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 62 - 383
Target Start/End: Original strand, 32353310 - 32353627
Alignment:
| Q |
62 |
catcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaattattctagtgctaatataactaacatgtaacttg |
161 |
Q |
| |
|
||||||||||||||||||||| || |||||| ||||| |||||||||||| || | ||||| |||||| || |||||| | |||||||| |||||||| |
|
|
| T |
32353310 |
catcaattttatattatttagcacatctcatc--cattatcatacactataggaaagagacaacattattttaatgctaacagaactaacaagtaacttg |
32353407 |
T |
|
| Q |
162 |
tgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttttctagtggcaaagtctcatttccctaaatt |
261 |
Q |
| |
|
| |||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
32353408 |
t-ttttacccattgaaccttcttcatgggatctccaatcacataggttgggttcccattacttgtcgttttctagtggcatagtctcatttccctaaatt |
32353506 |
T |
|
| Q |
262 |
ttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaattaacctcatatttcatcaagtttatataaa |
361 |
Q |
| |
|
| ||||| ||| ||||||||| |||| |||| ||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||| |||| || |
|
|
| T |
32353507 |
tcttcccagggggttttatatatggatccgcttaattcacaaatattgactaagacgtctctaagtcaatt-acctcttatttcatcaagtctataataa |
32353605 |
T |
|
| Q |
362 |
taaactcggattacacaataaa |
383 |
Q |
| |
|
|||||| |||||||||| |||| |
|
|
| T |
32353606 |
taaacttggattacacactaaa |
32353627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 27 - 263
Target Start/End: Original strand, 39427096 - 39427329
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||| || | |||| ||||| |||||||||||| || | ||||| | |
|
|
| T |
39427096 |
cttatggtaatcattaaaagcttttaaagcttacccatcaattttatattatttagcacatttcatc--cattatcatacactataggaaagagacaaca |
39427193 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
||||| | ||||||| | |||||||| |||| || | |||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
39427194 |
ttattttcgtgctaacagaactaacaagtaatttat-ttttacccattgaaccttcttcataggatctccaatcacaaaggttgggtttccattacttgt |
39427292 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaatttt |
263 |
Q |
| |
|
||||||| |||||| | ||||||||| |||||||||| |
|
|
| T |
39427293 |
cgttttcgagtggctatgtctcattttcctaaatttt |
39427329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 133 - 319
Target Start/End: Complemental strand, 32354435 - 32354254
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| |||||||||| || |||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||| |||||||||||| |
|
|
| T |
32354435 |
tagtgctaacataactaacaagtgacttgttttt--cccattgaacctttttcatgggatctccaatcataaaggttgggttcccatcacttgtcgtttt |
32354338 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgt |
319 |
Q |
| |
|
| ||||||| ||| |||||||| | ||| |||| ||| |||| | |||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
32354337 |
cgagtggcatagt-tcatttccttcgttttcttccc--gggtttttgtctacgaattcgttaaattcacaaatattgactaagacgt |
32354254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 2433987 - 2433928
Alignment:
| Q |
166 |
ttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggttctcattactt |
224 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||| |||||||| ||| |||| |
|
|
| T |
2433987 |
ttacccatatgaaccttattcatgggatctccaatcacaaagattgggttcccatcactt |
2433928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 62 - 442
Target Start/End: Complemental strand, 126933 - 126550
Alignment:
| Q |
62 |
catcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaattattctagtgctaatataactaacatgtaacttg |
161 |
Q |
| |
|
|||||| ||||||||||||| || |||||| ||||| |||||||||||| || | ||||| |||||| ||||||||| | |||||||| |||||||| |
|
|
| T |
126933 |
catcaaatttatattatttaccacatctcatc--cattatcatacactataggaaagagacaacattattttagtgctaacagaactaacaagtaacttg |
126836 |
T |
|
| Q |
162 |
tgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttttctagtggcaaagtctcatttccctaaatt |
261 |
Q |
| |
|
||||| ||||||| |||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| | |||||| |||||||||||| |
|
|
| T |
126835 |
tgttt-acccatttaaccttcttcatgggatctccaatcacaaaggttgggttcccattacttgtcgttttctagtggtatagtctcgtttccctaaatt |
126737 |
T |
|
| Q |
262 |
ttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaattaacctcatatttcatcaagtttatataaa |
361 |
Q |
| |
|
| ||||||||| |||||||||||||| ||||||||||||| |||||||||||| | | |||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
126736 |
tcttcccaaggggttttatatacggatccgctaaattcacatatattgactaaggcttctctaagtcaattaacctcatatttcatcaagtctataaaaa |
126637 |
T |
|
| Q |
362 |
taaactcggattacacaataaactaatacaaggc------gttgcctactaagcgacaacatgttcatcaataaaataaatctactt |
442 |
Q |
| |
|
||||||||||||| |||||||| |||||||| | |||| ||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
126636 |
taaactcggattaaacaataaataaatacaagtctgcttagttgtctactaagcgacaacatattcatcaataagataaatctactt |
126550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 184; Significance: 2e-99; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 27 - 393
Target Start/End: Original strand, 16086112 - 16086475
Alignment:
| Q |
27 |
cttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaa |
126 |
Q |
| |
|
||||| ||||||||||||| | ||| |||||||| ||||||||||||||||||||| || |||||| ||||| |||||||||||| || | ||||| | |
|
|
| T |
16086112 |
cttatggtaatcattaaaagcattttaagcttacccatcaattttatattatttagcacatctcatc--cattatcatacactataggaaagagacaaca |
16086209 |
T |
|
| Q |
127 |
ttattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgt |
226 |
Q |
| |
|
||| ||||||||| | ||||| || ||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| |
|
|
| T |
16086210 |
atatattagtgctaacagaactagcaagtaacttgt-ttttacccattgaaccttcttcatgggatctccaatcacaaaggttgggttcccattacttgt |
16086308 |
T |
|
| Q |
227 |
cgttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaag |
326 |
Q |
| |
|
||||||||||||||| || ||||| |||||||| || |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
16086309 |
cgttttctagtggcatagactcatatccctaaaattcttcccaatggattttatatacggatctgcttaattcacaaatattgactaagacgtctctaag |
16086408 |
T |
|
| Q |
327 |
tcaattaacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaag |
393 |
Q |
| |
|
||||||| |||||||||||||||| | |||| ||||||||||| ||| ||||||||| ||||||||| |
|
|
| T |
16086409 |
tcaattatcctcatatttcatcaaatctataaaaataaactcgaatttcacaataaattaatacaag |
16086475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 28 - 293
Target Start/End: Complemental strand, 31307900 - 31307636
Alignment:
| Q |
28 |
ttatcgtaatcattaaaaacttttaaagcttactcatcaattttatattatttagtacttctcatattcattaccatacactatagaaatgggacaaaat |
127 |
Q |
| |
|
|||| ||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||| || | |||||||||||| ||| ||||||||| |
|
|
| T |
31307900 |
ttatggtaatcattaaaagtatttaaaacttaaccatcaattttatattatttagtacttctcatatctatcatcatacactataggaataggacaaaat |
31307801 |
T |
|
| Q |
128 |
tattctagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtc |
227 |
Q |
| |
|
||| |||||||| ||| ||||| |||| |||| ||||||| |||||||||| |||||||| |||||||| ||||| |||||| |||||||| |||| |
|
|
| T |
31307800 |
catttcagtgctaacttaattaacaagtaatttgt-ttttacctattgaaccttcttcatgggttctccaataacaaaggttgggctctcattatctgtc |
31307702 |
T |
|
| Q |
228 |
gttttctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgct |
293 |
Q |
| |
|
|||||||||||||| |||||| ||||| ||||||| |||||||| |||||||||||||| |||| |
|
|
| T |
31307701 |
gttttctagtggcatagtctcgtttccttaaatttcttcccaaggagttttatatacggatccgct |
31307636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 26052472 - 26052353
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| |||||||||| | |||||| ||| |||||| |||||||||||||||||||||| ||| ||| |||||||| ||| |||||||||||| |
|
|
| T |
26052472 |
tagtgctaacataactaacaaatgacttgttttt--cccattaaacctttttcatgggatctccattcataaaggttgggtttccatcacttgtcgtttt |
26052375 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttcc |
254 |
Q |
| |
|
| |||||| |||||||||||| |
|
|
| T |
26052374 |
cgtgtggcatagtctcatttcc |
26052353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 25636094 - 25636143
Alignment:
| Q |
166 |
ttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggtt |
214 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||| |||||||| |
|
|
| T |
25636094 |
ttacccatatgaaccttattcatgggatctccaatcacaaaggttgggtt |
25636143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 170; Significance: 5e-91; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 164 - 442
Target Start/End: Original strand, 38641717 - 38642001
Alignment:
| Q |
164 |
ttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgttttctagtggcaaagtctcatttccctaaatttt |
263 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||| |||||| | ||||||||||||||||||| |
|
|
| T |
38641717 |
ttttacccattgaaccttcttcatgggatctccaatcacaaagtatgggttcccattacttgtcgttttcgagtggctatgtctcatttccctaaatttc |
38641816 |
T |
|
| Q |
264 |
ctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaattaacctcatatttcatcaagtttatataaata |
363 |
Q |
| |
|
||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
38641817 |
ttcccaaggggttttatatacggatccgctaaattcacatatattgactaagacgtctctaagtcaattaacctcatatttcatcaagtctataaaaata |
38641916 |
T |
|
| Q |
364 |
aactcggattacacaataaactaatacaaggc------gttgcctactaagcgacaacatgttcatcaataaaataaatctactt |
442 |
Q |
| |
|
||||||||||| |||||||| |||||||| | |||| ||||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
38641917 |
aactcggattaaacaataaataaatacaagtctgcttagttgtctactaagcgacaacatattcatcaataagataaatctactt |
38642001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 133 - 464
Target Start/End: Complemental strand, 43657015 - 43656696
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| |||||||||| || |||||| |||| |||||||||||||||||| ||||||||||||| ||| ||||||||| ||| |||||||||||| |
|
|
| T |
43657015 |
tagtgctaacataactaacaagtgacttgtttttt--ccattgaacctttttcataggatctccaatcataaaggttgggttcccatcacttgtcgtttt |
43656918 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttccctaaattttctcccaagggattttatatacggattcgctaaattcacaaatattgactaagacgtttctaagtcaatt |
332 |
Q |
| |
|
| ||||||| ||||| |||| ||| || ||| || ||| |||| | ||| ||||| |||||||||||||||||||||||| || ||| | |||||| |
|
|
| T |
43656917 |
cgagtggcatagtcttattt-ccttctttctcttcctggggtttttgtcaacgaattcgttaaattcacaaatattgactaagatgtctcttaatcaatt |
43656819 |
T |
|
| Q |
333 |
aacctcatatttcatcaagtttatataaataaactcggattacacaataaactaatacaaggcgttgcctactaagcgacaacatgttcatcaataaaat |
432 |
Q |
| |
|
|| ||||||||||||| || | || ||||||||||||||| ||| ||||| | |||||| | ||||| ||||| ||||| |||||||| || || |
|
|
| T |
43656818 |
aatctcatatttcatcgag--tctaaaaataaactcggatttcactataaatttatacaa------gtctact-agcgaaaacatattcatcaacaagat |
43656728 |
T |
|
| Q |
433 |
aaatctacttataaatttattctcatttgatt |
464 |
Q |
| |
|
||||||||||||| ||||||||||||| |||| |
|
|
| T |
43656727 |
aaatctacttatagatttattctcattggatt |
43656696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 396 - 467
Target Start/End: Complemental strand, 31182633 - 31182562
Alignment:
| Q |
396 |
gttgcctactaagcgacaacatgttcatcaataaaataaatctacttataaatttattctcatttgattcat |
467 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
31182633 |
gttgtctactaagcgacaacatattcatcaataagataaatctacttattgatttattctcattggattcat |
31182562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 21256770 - 21256849
Alignment:
| Q |
145 |
aactaacatgtaacttgtgttttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggttctcattactt |
224 |
Q |
| |
|
|||||| | ||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| |||| |
|
|
| T |
21256770 |
aactaataagtaacttgt-ttttacccatatgaaccttattcatgggatctccaatcacaaatgttgggttcccatcactt |
21256849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 31182932 - 31182862
Alignment:
| Q |
145 |
aactaacatgtaacttgtgttttacc-cattgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
||||||||||| |||||| | ||||| ||||||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
31182932 |
aactaacatgtgacttgt-tcttaccacattgaaccttcttcatgggatctccaatcacaaaggttgggttc |
31182862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 215
Target Start/End: Complemental strand, 38677762 - 38677692
Alignment:
| Q |
145 |
aactaacatgtaacttgtgttttacc-cattgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
|||||||||||||||||| | ||||| || |||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
38677762 |
aactaacatgtaacttgt-tcttaccacaatgaaccttcttcatgggatctccaatcacaaaggttgggttc |
38677692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 38677435 - 38677372
Alignment:
| Q |
396 |
gttgcctactaagcgacaacatgttcatcaataaaataaatctacttataaatttattctcatt |
459 |
Q |
| |
|
|||| |||| |||| ||||||| |||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
38677435 |
gttgtctaccaagcaacaacatactcatcaataagataaatctacttatagatttattctcatt |
38677372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 224
Target Start/End: Complemental strand, 9032534 - 9032484
Alignment:
| Q |
174 |
tgaacctttttcatgggatctccaatcacaaatgttgggttctcattactt |
224 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| ||||||||| ||| |||| |
|
|
| T |
9032534 |
tgaaccttattcatgggatctccaatcacaaaggttgggttcccatcactt |
9032484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 44316014 - 44315964
Alignment:
| Q |
166 |
ttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
44316014 |
ttacccatatgaaccttattcatgggatctccaatcacaaaggttgggttc |
44315964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 367
Target Start/End: Complemental strand, 9032358 - 9032295
Alignment:
| Q |
306 |
attgactaagacgtttctaagtcaattaacctcatat-ttcatc-aagtttatataaataaact |
367 |
Q |
| |
|
|||||||||||||| ||||||||||| |||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
9032358 |
attgactaagacgtctctaagtcaatcaacctcatatattcatcaaagtttataacaataaact |
9032295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 29278193 - 29278152
Alignment:
| Q |
174 |
tgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||| ||||||||| |
|
|
| T |
29278193 |
tgaaccttattcatgggatctcaaatcacaaaggttgggttc |
29278152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 254
Target Start/End: Complemental strand, 201586 - 201467
Alignment:
| Q |
133 |
tagtgctaatataactaacatgtaacttgtgttttacccattgaacctttttcatgggatctccaatcacaaatgttgggttctcattacttgtcgtttt |
232 |
Q |
| |
|
||||||||| |||||||||| | |||||| ||| |||||||||||||||||| |||||||||||||| ||| |||||||| ||| |||||||||||| |
|
|
| T |
201586 |
tagtgctaacataactaacaaatgacttgttttt--cccattgaacctttttcacgggatctccaatcataaaggttgggttaccatcacttgtcgtttt |
201489 |
T |
|
| Q |
233 |
ctagtggcaaagtctcatttcc |
254 |
Q |
| |
|
||||||| |||||||||||| |
|
|
| T |
201488 |
tgagtggcatagtctcatttcc |
201467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 357
Target Start/End: Complemental strand, 201354 - 201290
Alignment:
| Q |
293 |
taaattcacaaatattgactaagacgtttctaagtcaattaacctcatatttcatcaagtttata |
357 |
Q |
| |
|
|||||||||||||||| |||||||||| ||| | |||||||| ||| |||||| ||||||||||| |
|
|
| T |
201354 |
taaattcacaaatattaactaagacgtctcttaatcaattaatctcgtatttcgtcaagtttata |
201290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0086 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0086
Description:
Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 38356 - 38406
Alignment:
| Q |
166 |
ttacccat-tgaacctttttcatgggatctccaatcacaaatgttgggttc |
215 |
Q |
| |
|
|||||||| |||||||| ||||||||||||||||||||||| ||||||||| |
|
|
| T |
38356 |
ttacccatatgaaccttattcatgggatctccaatcacaaaggttgggttc |
38406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0086; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 38488 - 38548
Alignment:
| Q |
284 |
cggattcgctaaattcacaaatattgactaagacgtttctaagtcaattaacctcatattt |
344 |
Q |
| |
|
||||| ||||||||||||||||||||| |||| ||| ||| | |||||||| ||||||||| |
|
|
| T |
38488 |
cggatccgctaaattcacaaatattgagtaaggcgtctcttaatcaattaatctcatattt |
38548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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