View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1590_high_72 (Length: 272)
Name: NF1590_high_72
Description: NF1590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1590_high_72 |
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Alignment Details
Target: chr2 (Bit Score: 252; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 41082109 - 41082364
Alignment:
| Q |
1 |
aaaagttgaataaaaaatagtaaatgtgtgaaaatattaatagctgatattcttgtaacaattgtactaaatgagccagacattggttaataggccagct |
100 |
Q |
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| T |
41082109 |
aaaagttgaataataaatagtaaatgtgtgaaaatattaatagctgatattcttgtaacaattgtactaaatgagccagacattggttaataggccagct |
41082208 |
T |
|
| Q |
101 |
agtttaagctgtaagaaagaaattgttgaagttgaaatagaattttaaagcaaaaaataaagacactatgctccataaataggtagtagcttgccctgta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41082209 |
agtttaagctgtaagaaagaaattgttgaagttgaaatagaattttaaagcaaaaaataaagacactatgctccataaataggtagtagcttgccctgta |
41082308 |
T |
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| Q |
201 |
tggttatttacatttaatagagaattggtacggtagccagggggaacagaagaaaa |
256 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41082309 |
tggttatttacatttaatagagaattggtacggtagccagggggaacagaagaaaa |
41082364 |
T |
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