View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1590_high_78 (Length: 254)
Name: NF1590_high_78
Description: NF1590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1590_high_78 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 41361366 - 41361608
Alignment:
| Q |
1 |
tttattttttatttggtgtttgtgattgctggatatatttttcttctcttgatgctgtttatgtttaaactgctttttcccctgataattgaacaacgga |
100 |
Q |
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| T |
41361366 |
tttattttttatttggtgtttgtgattgctggatatatttttcttctcttgatgctgtttatgtttaaactgctttttcccctgataattgaacaacgga |
41361465 |
T |
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| Q |
101 |
aatggcattgagttgctcatctcatgagttgtaacctcaatattaattccatcaagcacaataatcatacaactcaaaaactttgaatactctgcgaatg |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41361466 |
aatggcatcgagttgctcatctcatgagttgtaacctcaatattaattccatcaagcacaataatcatacaactcaaaaactttgaatactctgcgaatg |
41361565 |
T |
|
| Q |
201 |
ttgttttgcaatttgtcctcgaagttgtggcatattcttctca |
243 |
Q |
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| T |
41361566 |
ttgttttgcaatttgtcctcgaagttgtggcatattcttctca |
41361608 |
T |
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