View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1590_low_115 (Length: 238)
Name: NF1590_low_115
Description: NF1590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1590_low_115 |
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Alignment Details
Target: chr7 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 23078187 - 23078400
Alignment:
| Q |
16 |
caaaacagactcaataaaatcatgaataactcactctaaaacctctaaattgtcttcaaatgcttattattcgatgaggcgtcatcatagatcaattcat |
115 |
Q |
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| T |
23078187 |
caaaacagactcaataaaatcatgaataactcactttaaaacctctaaattgtcttcaaatgcttattattcgatgaggcgtcatcatagatcaattcat |
23078286 |
T |
|
| Q |
116 |
gggaggtatgtttcaggattattcaatacacgtggataatttacctatggcttctgaatcagaattatttctattattgggtcgtaggtaaatcctccaa |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23078287 |
gggaggtatgtttcaggattattcaatacacgtggataatttacctatggcttctgaatcagaattatttctattattgggtcgtaggtaaatcctccaa |
23078386 |
T |
|
| Q |
216 |
cgtaagacatgttt |
229 |
Q |
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|||||||||||||| |
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| T |
23078387 |
cgtaagacatgttt |
23078400 |
T |
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