View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1590_low_139 (Length: 214)
Name: NF1590_low_139
Description: NF1590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1590_low_139 |
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Alignment Details
Target: chr2 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 16560231 - 16560049
Alignment:
| Q |
1 |
tgatttactaggatgttgttgttgaattatgcttttcattagaaaatcttatgaaaaattgaaaattattactaatgaaaatgttatggctcttaatccg |
100 |
Q |
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| T |
16560231 |
tgatttactaggatgttgttgttgaattatccttttcattagaaaatcttatgaaaaattgaaaat----------------gttatggctcttaatccg |
16560148 |
T |
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| Q |
101 |
atctttcttaaaataaaattgaaaaggaattttggctccaacggcgcccaaccatgataattttgtatacacaaatagagacgacatggctatataata |
199 |
Q |
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| T |
16560147 |
atctttcttaaaataaaattgaaaaggaattttggctccaacggcgcccaaccatgataattttgtatacacaaatagagacgacatggctatataata |
16560049 |
T |
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