View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1590_low_90 (Length: 251)

Name: NF1590_low_90
Description: NF1590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1590_low_90
NF1590_low_90
[»] chr3 (30 HSPs)
chr3 (13-202)||(41659359-41659548)
chr3 (13-56)||(14182630-14182673)
chr3 (13-56)||(43429778-43429821)
chr3 (13-58)||(31416456-31416501)
chr3 (21-57)||(11884474-11884510)
chr3 (13-56)||(6230899-6230942)
chr3 (13-56)||(13330743-13330786)
chr3 (13-56)||(17320817-17320860)
chr3 (22-56)||(37919129-37919163)
chr3 (14-56)||(39653731-39653773)
chr3 (25-56)||(293777-293808)
chr3 (13-48)||(4164485-4164520)
chr3 (14-57)||(5230854-5230897)
chr3 (13-56)||(11360546-11360589)
chr3 (13-56)||(11517691-11517734)
chr3 (13-56)||(12019814-12019857)
chr3 (13-56)||(12950459-12950502)
chr3 (13-56)||(22637222-22637265)
chr3 (13-56)||(34557759-34557802)
chr3 (13-56)||(38378409-38378452)
chr3 (13-56)||(38815700-38815743)
chr3 (14-56)||(15548398-15548440)
chr3 (14-56)||(40041802-40041844)
chr3 (14-56)||(55513939-55513981)
chr3 (23-56)||(8687761-8687794)
chr3 (23-56)||(9039630-9039663)
chr3 (13-57)||(15552137-15552181)
chr3 (12-56)||(17761040-17761084)
chr3 (12-56)||(19062360-19062404)
chr3 (13-57)||(24902123-24902167)
[»] scaffold0480 (1 HSPs)
scaffold0480 (13-57)||(11240-11284)
[»] scaffold0133 (1 HSPs)
scaffold0133 (13-57)||(3922-3966)
[»] chr8 (28 HSPs)
chr8 (13-57)||(19334250-19334294)
chr8 (13-57)||(20707677-20707721)
chr8 (13-57)||(22499545-22499589)
chr8 (14-56)||(11541895-11541937)
chr8 (12-57)||(22725674-22725719)
chr8 (13-56)||(5851390-5851433)
chr8 (13-56)||(17499747-17499790)
chr8 (13-56)||(24554816-24554859)
chr8 (13-56)||(27233434-27233477)
chr8 (13-56)||(33170141-33170184)
chr8 (14-56)||(22883680-22883722)
chr8 (14-56)||(26009321-26009363)
chr8 (22-56)||(29295769-29295803)
chr8 (13-54)||(18043392-18043433)
chr8 (13-54)||(23119081-23119122)
chr8 (14-54)||(11599965-11600005)
chr8 (13-57)||(21234268-21234312)
chr8 (13-56)||(15931213-15931256)
chr8 (21-56)||(18120645-18120680)
chr8 (13-56)||(18263644-18263687)
chr8 (13-56)||(24236922-24236965)
chr8 (22-56)||(17264388-17264422)
chr8 (14-56)||(21192969-21193011)
chr8 (14-56)||(23833156-23833198)
chr8 (13-58)||(18770375-18770420)
chr8 (13-58)||(39449059-39449104)
chr8 (14-54)||(17283127-17283167)
chr8 (13-57)||(17731774-17731818)
[»] chr7 (37 HSPs)
chr7 (13-57)||(3194260-3194304)
chr7 (13-56)||(14938598-14938641)
chr7 (13-56)||(15366191-15366234)
chr7 (13-56)||(21677736-21677779)
chr7 (14-56)||(17926734-17926776)
chr7 (13-53)||(20587860-20587900)
chr7 (13-56)||(9058860-9058903)
chr7 (13-56)||(9323298-9323341)
chr7 (13-56)||(14303085-14303128)
chr7 (13-56)||(16381803-16381846)
chr7 (13-56)||(17948266-17948309)
chr7 (13-56)||(28388355-28388398)
chr7 (13-56)||(31499135-31499178)
chr7 (13-56)||(34243380-34243423)
chr7 (14-56)||(15305335-15305377)
chr7 (14-56)||(15980753-15980795)
chr7 (22-56)||(48345478-48345512)
chr7 (16-56)||(9640942-9640982)
chr7 (13-57)||(14279143-14279187)
chr7 (13-56)||(3135056-3135099)
chr7 (13-56)||(4444176-4444219)
chr7 (21-56)||(5617346-5617381)
chr7 (13-56)||(12182130-12182173)
chr7 (13-56)||(16370603-16370646)
chr7 (21-56)||(16487359-16487394)
chr7 (13-56)||(16915539-16915582)
chr7 (13-56)||(18081538-18081581)
chr7 (13-56)||(18366256-18366299)
chr7 (13-56)||(18921294-18921337)
chr7 (13-56)||(19380852-19380895)
chr7 (13-56)||(39294393-39294436)
chr7 (22-56)||(9609134-9609168)
chr7 (22-56)||(9836706-9836740)
chr7 (14-52)||(12245586-12245624)
chr7 (14-56)||(19065155-19065197)
chr7 (13-57)||(25122069-25122113)
chr7 (16-56)||(28717935-28717975)
[»] chr5 (20 HSPs)
chr5 (13-57)||(3421072-3421116)
chr5 (13-56)||(11963147-11963190)
chr5 (13-58)||(6454592-6454637)
chr5 (13-54)||(28887783-28887824)
chr5 (14-57)||(5453571-5453614)
chr5 (13-56)||(16837974-16838017)
chr5 (21-56)||(23236657-23236692)
chr5 (13-56)||(24082005-24082048)
chr5 (22-56)||(11765960-11765994)
chr5 (23-57)||(19871803-19871837)
chr5 (14-56)||(22879787-22879829)
chr5 (22-75)||(33628802-33628855)
chr5 (13-57)||(14345909-14345953)
chr5 (13-56)||(12030115-12030158)
chr5 (13-56)||(22056090-22056133)
chr5 (13-56)||(29911937-29911980)
chr5 (13-56)||(37985731-37985774)
chr5 (14-56)||(13793026-13793068)
chr5 (13-57)||(430686-430730)
chr5 (14-54)||(23411879-23411919)
[»] chr4 (29 HSPs)
chr4 (13-57)||(13449253-13449297)
chr4 (13-57)||(42706674-42706718)
chr4 (13-57)||(50224397-50224441)
chr4 (13-56)||(12370677-12370720)
chr4 (14-56)||(15216401-15216443)
chr4 (13-57)||(12729296-12729340)
chr4 (14-58)||(15853524-15853568)
chr4 (12-56)||(17378429-17378473)
chr4 (13-57)||(19557222-19557266)
chr4 (13-56)||(18241428-18241471)
chr4 (14-56)||(12136525-12136567)
chr4 (13-63)||(14867262-14867312)
chr4 (14-56)||(24236830-24236872)
chr4 (14-52)||(41168157-41168195)
chr4 (13-54)||(41919488-41919529)
chr4 (16-56)||(13596263-13596303)
chr4 (21-56)||(5407062-5407097)
chr4 (14-57)||(7966843-7966886)
chr4 (13-56)||(10239681-10239724)
chr4 (21-56)||(12338912-12338947)
chr4 (21-56)||(18274701-18274736)
chr4 (13-56)||(18496716-18496759)
chr4 (13-56)||(31113600-31113643)
chr4 (13-56)||(47470575-47470618)
chr4 (22-56)||(19624283-19624317)
chr4 (14-56)||(54366290-54366332)
chr4 (15-56)||(41258622-41258663)
chr4 (13-57)||(14503779-14503823)
chr4 (16-56)||(38762670-38762710)
[»] scaffold1068 (1 HSPs)
scaffold1068 (13-56)||(1210-1253)
[»] scaffold0409 (2 HSPs)
scaffold0409 (13-56)||(3058-3101)
scaffold0409 (13-56)||(11313-11356)
[»] scaffold0385 (1 HSPs)
scaffold0385 (13-56)||(12705-12748)
[»] scaffold0148 (1 HSPs)
scaffold0148 (13-56)||(35814-35857)
[»] scaffold0020 (1 HSPs)
scaffold0020 (13-56)||(103876-103919)
[»] scaffold0003 (1 HSPs)
scaffold0003 (13-56)||(99037-99080)
[»] chr6 (28 HSPs)
chr6 (13-56)||(6092419-6092462)
chr6 (13-56)||(15006870-15006913)
chr6 (13-56)||(17085789-17085832)
chr6 (13-56)||(19670426-19670469)
chr6 (13-56)||(34964822-34964865)
chr6 (13-57)||(16890048-16890092)
chr6 (13-57)||(17858608-17858652)
chr6 (13-56)||(12311244-12311287)
chr6 (13-56)||(16373877-16373920)
chr6 (13-56)||(22364475-22364518)
chr6 (13-56)||(22595901-22595944)
chr6 (13-56)||(22846013-22846056)
chr6 (13-56)||(23025077-23025120)
chr6 (13-56)||(31469752-31469795)
chr6 (14-56)||(21929332-21929374)
chr6 (14-56)||(29163157-29163199)
chr6 (13-57)||(941272-941316)
chr6 (21-57)||(22468323-22468359)
chr6 (13-56)||(14150468-14150511)
chr6 (14-57)||(16131146-16131189)
chr6 (13-56)||(17375952-17375995)
chr6 (14-53)||(18017713-18017752)
chr6 (25-56)||(21927493-21927524)
chr6 (13-56)||(25782599-25782642)
chr6 (13-56)||(25917579-25917622)
chr6 (14-56)||(17791403-17791445)
chr6 (13-57)||(15081093-15081137)
chr6 (13-57)||(25369680-25369724)
[»] chr2 (17 HSPs)
chr2 (13-56)||(24271938-24271981)
chr2 (12-54)||(19643763-19643805)
chr2 (13-57)||(19436160-19436204)
chr2 (13-56)||(6092343-6092386)
chr2 (13-56)||(19647975-19648018)
chr2 (13-56)||(24381661-24381704)
chr2 (14-56)||(25303476-25303518)
chr2 (14-56)||(25593128-25593170)
chr2 (14-56)||(32738356-32738398)
chr2 (14-56)||(45620681-45620723)
chr2 (15-56)||(43640240-43640281)
chr2 (13-56)||(9783106-9783149)
chr2 (13-56)||(20021763-20021806)
chr2 (13-56)||(30995221-30995264)
chr2 (13-56)||(32463805-32463848)
chr2 (13-56)||(34875919-34875962)
chr2 (25-57)||(20270819-20270851)
[»] chr1 (16 HSPs)
chr1 (13-56)||(21193051-21193094)
chr1 (13-56)||(40555265-40555308)
chr1 (13-56)||(50002186-50002229)
chr1 (10-57)||(52397549-52397596)
chr1 (14-56)||(17606816-17606858)
chr1 (13-59)||(21041679-21041725)
chr1 (13-56)||(78732-78775)
chr1 (13-56)||(18164101-18164144)
chr1 (13-56)||(20957269-20957312)
chr1 (14-56)||(25090964-25091006)
chr1 (14-56)||(27672677-27672719)
chr1 (13-58)||(46143666-46143711)
chr1 (13-57)||(21223611-21223655)
chr1 (13-57)||(37236198-37236242)
chr1 (22-57)||(20191652-20191687)
chr1 (13-56)||(29217047-29217090)
[»] scaffold0561 (1 HSPs)
scaffold0561 (14-56)||(4983-5025)
[»] scaffold0357 (1 HSPs)
scaffold0357 (13-54)||(5649-5690)
[»] scaffold0032 (3 HSPs)
scaffold0032 (13-58)||(106850-106895)
scaffold0032 (15-56)||(122190-122231)
scaffold0032 (13-57)||(102036-102080)
[»] scaffold0387 (1 HSPs)
scaffold0387 (13-61)||(3266-3314)
[»] scaffold0006 (1 HSPs)
scaffold0006 (16-56)||(199586-199626)
[»] scaffold1949 (1 HSPs)
scaffold1949 (13-56)||(1091-1134)
[»] scaffold0442 (2 HSPs)
scaffold0442 (13-56)||(2211-2254)
scaffold0442 (13-56)||(14348-14391)
[»] scaffold0175 (1 HSPs)
scaffold0175 (21-56)||(7426-7461)
[»] scaffold0107 (1 HSPs)
scaffold0107 (14-57)||(11326-11369)
[»] scaffold0090 (1 HSPs)
scaffold0090 (13-56)||(7381-7424)
[»] scaffold0086 (1 HSPs)
scaffold0086 (13-56)||(34385-34428)
[»] scaffold0031 (1 HSPs)
scaffold0031 (13-56)||(99431-99474)
[»] scaffold0028 (1 HSPs)
scaffold0028 (13-56)||(70540-70583)
[»] scaffold0009 (1 HSPs)
scaffold0009 (13-56)||(99182-99225)
[»] scaffold0004 (1 HSPs)
scaffold0004 (13-56)||(84314-84357)
[»] scaffold0001 (1 HSPs)
scaffold0001 (13-56)||(141494-141537)
[»] scaffold0725 (1 HSPs)
scaffold0725 (14-56)||(6976-7018)
[»] scaffold0503 (1 HSPs)
scaffold0503 (13-59)||(9246-9292)
[»] scaffold0047 (2 HSPs)
scaffold0047 (14-56)||(2359-2401)
scaffold0047 (14-56)||(73525-73567)
[»] scaffold0017 (1 HSPs)
scaffold0017 (14-56)||(10175-10217)
[»] scaffold0601 (1 HSPs)
scaffold0601 (23-56)||(3626-3659)
[»] scaffold0329 (1 HSPs)
scaffold0329 (15-56)||(1012-1053)
[»] scaffold0258 (1 HSPs)
scaffold0258 (13-54)||(8197-8238)
[»] scaffold0174 (2 HSPs)
scaffold0174 (13-58)||(22801-22846)
scaffold0174 (21-56)||(464-499)
[»] scaffold0219 (1 HSPs)
scaffold0219 (21-57)||(26265-26301)
[»] scaffold0013 (1 HSPs)
scaffold0013 (24-56)||(33367-33399)
[»] scaffold0557 (1 HSPs)
scaffold0557 (13-56)||(458-501)
[»] scaffold0456 (1 HSPs)
scaffold0456 (13-56)||(12895-12938)
[»] scaffold0331 (1 HSPs)
scaffold0331 (14-49)||(6175-6210)
[»] scaffold0231 (2 HSPs)
scaffold0231 (13-56)||(16094-16137)
scaffold0231 (14-56)||(15581-15623)
[»] scaffold0193 (1 HSPs)
scaffold0193 (13-56)||(2833-2876)
[»] scaffold0165 (1 HSPs)
scaffold0165 (13-56)||(20036-20079)
[»] scaffold0151 (1 HSPs)
scaffold0151 (13-56)||(31885-31928)
[»] scaffold0112 (1 HSPs)
scaffold0112 (13-56)||(4784-4827)
[»] scaffold0066 (2 HSPs)
scaffold0066 (13-56)||(43796-43839)
scaffold0066 (13-56)||(51966-52009)
[»] scaffold0057 (1 HSPs)
scaffold0057 (23-54)||(3854-3885)
[»] scaffold0216 (1 HSPs)
scaffold0216 (14-48)||(23350-23384)
[»] scaffold0092 (1 HSPs)
scaffold0092 (14-56)||(1227-1269)
[»] scaffold0025 (1 HSPs)
scaffold0025 (14-56)||(2377-2419)
[»] scaffold0010 (1 HSPs)
scaffold0010 (14-56)||(28994-29036)
[»] scaffold0236 (1 HSPs)
scaffold0236 (13-58)||(25609-25654)
[»] scaffold0161 (1 HSPs)
scaffold0161 (22-55)||(25281-25314)
[»] scaffold0095 (1 HSPs)
scaffold0095 (13-58)||(7902-7947)
[»] scaffold0121 (1 HSPs)
scaffold0121 (13-61)||(6867-6915)
[»] scaffold0042 (1 HSPs)
scaffold0042 (13-57)||(75062-75106)


Alignment Details
Target: chr3 (Bit Score: 170; Significance: 2e-91; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 13 - 202
Target Start/End: Complemental strand, 41659548 - 41659359
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacatatatcacctatatttatatgtgattatctttctttacttcatgatcaagtttcct 112  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  41659548 attattctcgtgttttatcactttaatagaaatagggcgttatatatatcacatatatttatatgtggttatctttctttacttcatgatcaagtttcct 41659449  T
Q  113 tgcttcacgagtaaagcatcttcgtgaccgagtgatttcgatgggtaagaaactcccttctctttacttactggcttataagtaaacctc 202  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41659448 tgcttcacgagtaaagtatcttcgtgaccgagtgatttcgatgggtaagaaactcccttctctttacttactggcttataagtaaacctc 41659359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 14182630 - 14182673
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  14182630 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 14182673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 43429778 - 43429821
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  43429778 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 43429821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 31416456 - 31416501
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||    
T  31416456 attattcgcgtgttttatcgctttaatagaaacagggcgttacata 31416501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 11884474 - 11884510
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  11884474 cgtgttttatcgctttaatagaaatagggcgttacat 11884510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 6230899 - 6230942
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  6230899 attattcgcatgttttatcgctttaatagaaatagggcgttaca 6230942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 13330786 - 13330743
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  13330786 attattcgcgtgttttatcgctttaatagaagtagggcgttaca 13330743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17320817 - 17320860
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  17320817 attattcgcgtgttttattgctttaatagaaatagggcgttaca 17320860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 37919129 - 37919163
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||||||||||||||||||||||||||||||    
T  37919129 gtgttttatcgctttaatagaaatagggcgttaca 37919163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 39653773 - 39653731
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  39653773 ttattcgcgagttttatcgctttaatagaaatagggcgttaca 39653731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Complemental strand, 293808 - 293777
Alignment:
Q  25 ttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||||||||    
T  293808 ttttatcgctttaatagaaatagggcgttaca 293777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 4164485 - 4164520
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagg 48  Q
    ||||||| ||||||||||||||||||||||||||||    
T  4164485 attattcgcgtgttttatcgctttaatagaaatagg 4164520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 5230854 - 5230897
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||| ||||||||||| || ||||||||||||||||||||||    
T  5230854 ttattcgcgtgttttatcactgtaatagaaatagggcgttacat 5230897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 11360589 - 11360546
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||    
T  11360589 attattcgcgtgttttatcgctttaatagaagtaggacgttaca 11360546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 11517691 - 11517734
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||| |||||||||||||||||||| |||||||||    
T  11517691 attattcgcgtgtattatcgctttaatagaaatatggcgttaca 11517734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 12019857 - 12019814
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||  |||||||||||||||||||||||||    
T  12019857 attattcgcgtgttttactgctttaatagaaatagggcgttaca 12019814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 12950502 - 12950459
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||| |||||||||||||||| ||||||    
T  12950502 attattcgcgtgttttatcgttttaatagaaatagggtgttaca 12950459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 22637265 - 22637222
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||| ||||||||||||||| |||||||||    
T  22637265 attattcgcgtgttttattgctttaatagaaatatggcgttaca 22637222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34557802 - 34557759
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||| ||||||||||||||| |||||||    
T  34557802 attattcgcgtgttttatcgttttaatagaaataggacgttaca 34557759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 38378409 - 38378452
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||  |||||||||||||||||||||||||||| ||||||    
T  38378409 attattcgtgtgttttatcgctttaatagaaatagggtgttaca 38378452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 38815700 - 38815743
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||  ||||||||||||||||||||||||| |||||||||    
T  38815700 attattcgtgtgttttatcgctttaatagaaataaggcgttaca 38815743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 15548440 - 15548398
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||| |||||||||||| |||||||||    
T  15548440 ttattcgcgtgttttatcgcattaatagaaataaggcgttaca 15548398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 40041802 - 40041844
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||| |||||||| |||||||||||||||    
T  40041802 ttattcgcgtgttttatcactttaatataaatagggcgttaca 40041844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 55513939 - 55513981
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||||||||||||||||||| || ||||||    
T  55513939 ttattcgcgtgttttatcgctttaatagaaataaggtgttaca 55513981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 8687794 - 8687761
Alignment:
Q  23 tgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||| ||||||||||||    
T  8687794 tgttttatcgctttaatagaagtagggcgttaca 8687761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 9039663 - 9039630
Alignment:
Q  23 tgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||| ||||||||||||    
T  9039663 tgttttatcgctttaatagaagtagggcgttaca 9039630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 15552137 - 15552181
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||||  |||||||| |||||||||||| ||||||||||||||    
T  15552137 attattcgtgtgttttaccgctttaatagagatagggcgttacat 15552181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 17761040 - 17761084
Alignment:
Q  12 gattattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||| |||||||||||| ||||||||  |||||||||||||    
T  17761040 gattattcgcgtgttttatcgatttaatagggatagggcgttaca 17761084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 19062360 - 19062404
Alignment:
Q  12 gattattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||| |||||||||||| ||||||||  |||||||||||||    
T  19062360 gattattcgcgtgttttatcgatttaatagggatagggcgttaca 19062404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 24902123 - 24902167
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||  | ||||||||||    
T  24902123 attattcgcgtgttttatcgctttaatagaagcatggcgttacat 24902167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 11240 - 11284
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  11240 attattcgcgtgttttatcgctttaatagaaatagggcgttacat 11284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3922 - 3966
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  3922 attattcgcgtgttttatcgctttaatagaaatagggcgttacat 3966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19334250 - 19334294
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  19334250 attattcgcgtgttttatcgctttaatagaaatagggcgttacat 19334294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 20707721 - 20707677
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  20707721 attattcacgtgttttatcgctttaatagaaatagggcgttacat 20707677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 22499545 - 22499589
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  22499545 attattcacgtgttttatcgctttaatagaaatagggcgttacat 22499589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 11541937 - 11541895
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  11541937 ttattcgcgtgttttatcgctttaatagaaatagggcgttaca 11541895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 22725674 - 22725719
Alignment:
Q  12 gattattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||    
T  22725674 gattattcacgtgttttatcgctttaatagaaataggacgttacat 22725719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 5851433 - 5851390
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  5851433 attattcgcgtgttttatcgctttaatagaaatagggtgttaca 5851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 17499790 - 17499747
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  17499790 attattcgcgtgttttatcgctttaatagaagtagggcgttaca 17499747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 24554816 - 24554859
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  24554816 attattcgcgtgttttatcgctttaatagagatagggcgttaca 24554859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 27233434 - 27233477
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  27233434 attattcgcgtgttttaccgctttaatagaaatagggcgttaca 27233477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 33170184 - 33170141
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  33170184 attattcgcgtgttttatcgctttaataaaaatagggcgttaca 33170141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 22883722 - 22883680
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  22883722 ttattcgcgtgttttatcgctttaatataaatagggcgttaca 22883680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 26009363 - 26009321
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||||||||||||| |||||||||||||||    
T  26009363 ttattcgcgtgttttatcgctttaatataaatagggcgttaca 26009321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 29295803 - 29295769
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||||||||||||||||||||||||||||||    
T  29295803 gtgttttatcgctttaatagaaatagggcgttaca 29295769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 18043392 - 18043433
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  18043392 attattcgcgtgttttatcgctttaatagaaattgggcgtta 18043433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 23119081 - 23119122
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  23119081 attattcgcgtgttttatcgctttaatagaaataggacgtta 23119122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 11600005 - 11599965
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  11600005 ttattcgcgtgttttatcgttttaatagaaatagggcgtta 11599965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 21234268 - 21234312
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||    
T  21234268 attattcgcgtgttttatcactttaatagaaataggacgttacat 21234312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 15931256 - 15931213
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||| ||||||||| |||||||||||||||    
T  15931256 attattcgcgtgttttattgctttaataaaaatagggcgttaca 15931213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 18120645 - 18120680
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||||||||||||||||||||| |||||||||    
T  18120645 cgtgttttatcgctttaatagaaatatggcgttaca 18120680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18263644 - 18263687
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||    
T  18263644 attattcgcgtgttttattgctttgatagaaatagggcgttaca 18263687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 24236965 - 24236922
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | |||||||||||||||||||||||| |||||||||    
T  24236965 attattcgcatgttttatcgctttaatagaaataaggcgttaca 24236922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 17264422 - 17264388
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||||| |||||    
T  17264422 gtgttttatcgctttaatagaaatagggcattaca 17264388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 21192969 - 21193011
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||| ||||||||||||||||||| ||||||    
T  21192969 ttattcgcgtgttttaccgctttaatagaaatagggtgttaca 21193011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 23833198 - 23833156
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| || ||||||| |||||||||||||||||||||||||    
T  23833198 ttattcgcgagttttattgctttaatagaaatagggcgttaca 23833156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 18770375 - 18770420
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| | |||||||| ||||||||||||||||| |||||||||    
T  18770375 attattcgcatgttttattgctttaatagaaataggtcgttacata 18770420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 39449059 - 39449104
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| | |||||||| |||||||||||||||||| ||||||||    
T  39449059 attattcgcatgttttattgctttaatagaaatagggtgttacata 39449104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 17283167 - 17283127
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    |||||| || |||||||||||||||||||||||||| ||||    
T  17283167 ttattcgcgagttttatcgctttaatagaaatagggtgtta 17283127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 17731774 - 17731818
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | |||||||| |||||||||||||||||| |||||||    
T  17731774 attattcacatgttttattgctttaatagaaatagggtgttacat 17731818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3194260 - 3194304
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  3194260 attattcgcgtgttttatcgctttaatagaaatagggcgttacat 3194304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 14938641 - 14938598
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  14938641 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 14938598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 15366234 - 15366191
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  15366234 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 15366191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 21677736 - 21677779
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  21677736 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 21677779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 17926776 - 17926734
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17926776 ttattcgcgtgttttatcgctttaatagaaatagggcgttaca 17926734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 20587860 - 20587900
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgtt 53  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  20587860 attattcgcgtgttttatcgctttaatagaaatagggcgtt 20587900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 9058860 - 9058903
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  9058860 attattcgcgtgtttgatcgctttaatagaaatagggcgttaca 9058903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 9323298 - 9323341
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  9323298 attattcgcgtgttttatcgctttaataaaaatagggcgttaca 9323341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 14303085 - 14303128
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  14303085 attattcgcgtgttttatcgctttaatagaagtagggcgttaca 14303128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16381846 - 16381803
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  16381846 attattcgcgtgttttatcgctttaatagaaatagggtgttaca 16381803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17948266 - 17948309
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||    
T  17948266 attattcgcgtgttttatcgctttaatagaaatagtgcgttaca 17948309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 28388398 - 28388355
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  28388398 attattcgcgtgttttatcgctttaatagaaataggacgttaca 28388355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 31499178 - 31499135
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  31499178 attattcgcgtgttttatcgctttaatagaagtagggcgttaca 31499135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 34243380 - 34243423
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  34243380 attattcgcgtgttttatcgctttaatagaaatagggtgttaca 34243423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 15305377 - 15305335
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  15305377 ttattcgcgtgttttatcgctttaatagaagtagggcgttaca 15305335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 15980753 - 15980795
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||| ||||||||||||||||||||||||||||||    
T  15980753 ttattcgcgtgtattatcgctttaatagaaatagggcgttaca 15980795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 48345512 - 48345478
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||||||||||||||||||||||||||||||    
T  48345512 gtgttttatcgctttaatagaaatagggcgttaca 48345478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 9640982 - 9640942
Alignment:
Q  16 attctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  9640982 attcgcgtgttttatcgctttaaaagaaatagggcgttaca 9640942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 14279143 - 14279187
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||    
T  14279143 attattcgcgtgttttatcactttaatagaaataggacgttacat 14279187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 3135099 - 3135056
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||| || ||||||||||||    
T  3135099 attattcgcgtgttttatcgctttaataaaagtagggcgttaca 3135056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 4444219 - 4444176
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||    
T  4444219 attattcgcgtgtttaatctctttaatagaaatagggcgttaca 4444176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 5617381 - 5617346
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||| ||||||||||||||||||||||||||    
T  5617381 cgtgttttaccgctttaatagaaatagggcgttaca 5617346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 12182173 - 12182130
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||  ||||||||||||||||||||||||||| |||||||    
T  12182173 attattcgtgtgttttatcgctttaatagaaataggacgttaca 12182130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 16370603 - 16370646
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||| ||||||||||||||||| ||||||||||||||    
T  16370603 attattcacgtattttatcgctttaataggaatagggcgttaca 16370646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 16487394 - 16487359
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||| ||||||||||||||||||||||||||||||    
T  16487394 cgtgtattatcgctttaatagaaatagggcgttaca 16487359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16915582 - 16915539
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||    
T  16915582 attattcgcatgttttaccgctttaatagaaatagggcgttaca 16915539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18081538 - 18081581
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||| | |||||||    
T  18081538 attattcgcgtgttttatcgctttaatagaaataagacgttaca 18081581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18366256 - 18366299
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||    
T  18366256 attattcgcgtgttttatcgctttgatagaagtagggcgttaca 18366299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18921294 - 18921337
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||    
T  18921294 attattcgcgtgttttatcgctttaataaaaataggacgttaca 18921337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 19380895 - 19380852
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||    
T  19380895 attattcgcatgttttatcgctttaatagaagtagggcgttaca 19380852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 39294393 - 39294436
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||  |||||||||||||||| ||||||||||||||||||    
T  39294393 attattcgtgtgttttatcgctttattagaaatagggcgttaca 39294436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 9609168 - 9609134
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||| |||||||    
T  9609168 gtgttttatcgctttaatagaaataggtcgttaca 9609134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 9836740 - 9836706
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||| |||||||    
T  9836740 gtgttttatcgctttaatagaaataggtcgttaca 9836706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 12245624 - 12245586
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgt 52  Q
    |||||| |||||||||| |||||||||||||||||||||    
T  12245624 ttattcgcgtgttttattgctttaatagaaatagggcgt 12245586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 19065197 - 19065155
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||||||||||||||||||||  |||||||    
T  19065197 ttattcgcgtgttttatcgctttaatagaaatagtacgttaca 19065155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 25122113 - 25122069
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | |||||||| | ||||||||||||||||||||||||    
T  25122113 attattcacatgttttattgatttaatagaaatagggcgttacat 25122069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 28717975 - 28717935
Alignment:
Q  16 attctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||| |||||||||||||||||||| ||||| |||||||||    
T  28717975 attcgcgtgttttatcgctttaataaaaatatggcgttaca 28717935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 3421072 - 3421116
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  3421072 attattcgcgtgttttatcgctttaatagaaatagggcgttacat 3421116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 11963190 - 11963147
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  11963190 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 11963147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 6454637 - 6454592
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  6454637 attattcgcgtgttttatcgctttaatagaagtagggcgttacata 6454592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 28887824 - 28887783
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  28887824 attattcgcgtgttttatcgctttaatagaaatagggcgtta 28887783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 5453571 - 5453614
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  5453571 ttattctcgtgttttatcgctttaatagaaatatggtgttacat 5453614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 16837974 - 16838017
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  16837974 attattcgcgtgttttatcgctttaatagaaataaggcgttaca 16838017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 23236657 - 23236692
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||||||||||||    
T  23236657 cgtgttttatcgctttaatagaaatagggcgttaca 23236692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 24082048 - 24082005
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||| |||||||||||||||||||||||||||||    
T  24082048 attattcgcgtgttgtatcgctttaatagaaatagggcgttaca 24082005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 11765960 - 11765994
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||||||||||||||||||||||||||||||    
T  11765960 gtgttttatcgctttaatagaaatagggcgttaca 11765994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 57
Target Start/End: Complemental strand, 19871837 - 19871803
Alignment:
Q  23 tgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||||||||||||||||||||||||||||||||    
T  19871837 tgttttatcgctttaatagaaatagggcgttacat 19871803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 22879829 - 22879787
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  22879829 ttattcgcgtgttttatcgctttaatagaaatagggtgttaca 22879787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 75
Target Start/End: Original strand, 33628802 - 33628855
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttacatatatcacctatatttata 75  Q
    ||||||||||||||||||||||||||||||||| | || ||| |||||| ||||    
T  33628802 gtgttttatcgctttaatagaaatagggcgttatagatgtcatctatatctata 33628855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 14345909 - 14345953
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||||  |||||||||| |||||||||||||||||||||||||    
T  14345909 attattcgtgtgttttatctctttaatagaaatagggcgttacat 14345953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 12030115 - 12030158
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | |||||||| |||||||||||||||||||||||||    
T  12030115 attattcgcatgttttattgctttaatagaaatagggcgttaca 12030158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 22056090 - 22056133
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | |||||||| |||||||||||||||||||||||||    
T  22056090 attattcgcatgttttattgctttaatagaaatagggcgttaca 22056133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 29911980 - 29911937
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||  |||||||||||||||||||||||||||| ||||||    
T  29911980 attattcgtgtgttttatcgctttaatagaaatagggtgttaca 29911937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 37985774 - 37985731
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||||    
T  37985774 attattcacgtgtgttatcgctttaatagaaatagggggttaca 37985731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 13793068 - 13793026
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| || ||||||| |||||||||||||||||||||||||    
T  13793068 ttattcgcgagttttatggctttaatagaaatagggcgttaca 13793026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 430730 - 430686
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | |||||||| |||||||||||||||||| |||||||    
T  430730 attattcgcatgttttattgctttaatagaaatagggtgttacat 430686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 23411919 - 23411879
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    |||||| | |||||||||||||||||||||||| |||||||    
T  23411919 ttattcgcatgttttatcgctttaatagaaataaggcgtta 23411879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 13449253 - 13449297
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  13449253 attattcgcgtgttttatcgctttaatagaaatagggcgttacat 13449297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 42706718 - 42706674
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  42706718 attattcgcgtgttttatcgctttaatagaaatagggcgttacat 42706674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 50224397 - 50224441
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  50224397 attattcgcgtgttttatcgctttaatagaaatagggcgttacat 50224441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 12370677 - 12370720
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  12370677 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 12370720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 15216401 - 15216443
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  15216401 ttattcgcgtgttttatcgctttaatagaaatagggcgttaca 15216443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 12729340 - 12729296
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  12729340 attattcgcgtgttttatcgctttaatagaagtagggcgttacat 12729296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 58
Target Start/End: Original strand, 15853524 - 15853568
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    |||||| || |||||||||||||||||||||||||||||||||||    
T  15853524 ttattcgcgagttttatcgctttaatagaaatagggcgttacata 15853568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 17378429 - 17378473
Alignment:
Q  12 gattattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  17378429 gattattcacgtgttttatcgctttaatagaaatagcgcgttaca 17378473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19557266 - 19557222
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||||  ||||||||||||||||||||||||||||||||||||    
T  19557266 attattcatgtgttttatcgctttaatagaaatagggcgttacat 19557222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18241428 - 18241471
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||||||| |||||    
T  18241428 attattcacgtgttttatcgctttaatagaaatagggcattaca 18241471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 12136525 - 12136567
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  12136525 ttattcgcgtgttttatcgctttaatagaaatatggcgttaca 12136567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 14867312 - 14867262
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacatatatca 63  Q
    ||||||| | |||||||| |||||||||||||||||||||||||| |||||    
T  14867312 attattcgcatgttttattgctttaatagaaatagggcgttacatttatca 14867262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 24236872 - 24236830
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  24236872 ttattcgcgtgttttatcgctttaatagaaataaggcgttaca 24236830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 41168157 - 41168195
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgt 52  Q
    |||||| ||||||||||||||||||||||||||||||||    
T  41168157 ttattcacgtgttttatcgctttaatagaaatagggcgt 41168195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Original strand, 41919488 - 41919529
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  41919488 attattcgcgtgttttatcgctttaatagaaatagggtgtta 41919529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 13596263 - 13596303
Alignment:
Q  16 attctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||| |||||||||||||||||| |||||||||||||||||    
T  13596263 attcgcgtgttttatcgctttaaaagaaatagggcgttaca 13596303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 5407097 - 5407062
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||| ||||||||||||||||||||||||    
T  5407097 cgtgttttatcactttaatagaaatagggcgttaca 5407062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 7966843 - 7966886
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||| ||||||||||||||||||||||||||| | |||||||    
T  7966843 ttattcgcgtgttttatcgctttaatagaaatagagtgttacat 7966886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 10239681 - 10239724
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||    
T  10239681 attattcgcgtgttttattgctttaatagaaatagggcgctaca 10239724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 12338912 - 12338947
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||| ||||||||||||    
T  12338912 cgtgttttatcgctttaatagaagtagggcgttaca 12338947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 18274736 - 18274701
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||| ||||||||||||||||||||||||    
T  18274736 cgtgttttatcactttaatagaaatagggcgttaca 18274701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 18496716 - 18496759
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||| |||||||| |||||||||||||||||| ||||||    
T  18496716 attattctcatgttttattgctttaatagaaatagggtgttaca 18496759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 31113643 - 31113600
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | |||||||| |||||||||||||||||||||||||    
T  31113643 attattcgcatgttttattgctttaatagaaatagggcgttaca 31113600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 47470575 - 47470618
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||| |||||||||||||| |||||||||    
T  47470575 attattcgcgtgttttatcactttaatagaaatatggcgttaca 47470618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 19624283 - 19624317
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||| ||||||||||||||||||||||||||||||    
T  19624283 gtgtattatcgctttaatagaaatagggcgttaca 19624317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 54366290 - 54366332
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||| |||||||||||||||| ||||||||    
T  54366290 ttattcgcgtgttttattgctttaatagaaatagagcgttaca 54366332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 41258622 - 41258663
Alignment:
Q  15 tattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||| |||||||||||| ||||||||||||||||| |||||    
T  41258622 tattcgcgtgttttatcgttttaatagaaatagggcattaca 41258663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 14503779 - 14503823
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | ||||| || ||||||||||||||||||||||||||    
T  14503779 attattcgcatgtttaattgctttaatagaaatagggcgttacat 14503823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 38762710 - 38762670
Alignment:
Q  16 attctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||| ||| ||||||| ||||||||||||||||||||||||    
T  38762710 attcgcgtattttatcactttaatagaaatagggcgttaca 38762670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 1253 - 1210
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  1253 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 1210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 3058 - 3101
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  3058 attattcacgtgttttatcgctttaatagaaatagggcgttaca 3101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 11313 - 11356
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  11313 attattcacgtgttttatcgctttaatagaaatagggcgttaca 11356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 12705 - 12748
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  12705 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 12748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 35857 - 35814
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  35857 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 35814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 103919 - 103876
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  103919 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 103876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 99080 - 99037
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  99080 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 99037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 6092462 - 6092419
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  6092462 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 6092419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 15006870 - 15006913
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  15006870 attattcccgtgttttatcgctttaatagaaatagggcgttaca 15006913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17085789 - 17085832
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  17085789 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 17085832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 19670469 - 19670426
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  19670469 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 19670426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34964865 - 34964822
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  34964865 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 34964822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 16890048 - 16890092
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||    
T  16890048 attattcgcgtgttttatcgttttaatagaaatagggcgttacat 16890092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 17858608 - 17858652
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||    
T  17858608 attattcgcgtgttttattgctttaatagaaatagggcgttacat 17858652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 12311244 - 12311287
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  12311244 attattcgcgtgttttatcgctttaatagaaatatggcgttaca 12311287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 16373920 - 16373877
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||| |||||||||    
T  16373920 attattcgcgtgttttatcgctttaatagaaataaggcgttaca 16373877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 22364475 - 22364518
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  22364475 attattcgcgtgttttaccgctttaatagaaatagggcgttaca 22364518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 22595901 - 22595944
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  22595901 attattcgcgtgttttatcgctttaatagaagtagggcgttaca 22595944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 22846056 - 22846013
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  22846056 attattcgcgggttttatcgctttaatagaaatagggcgttaca 22846013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 23025077 - 23025120
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  23025077 attattcgcgtgttttatcgctttaatagaaatagggtgttaca 23025120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31469752 - 31469795
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  31469752 attattcgcgtgttttatcgttttaatagaaatagggcgttaca 31469795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 21929374 - 21929332
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  21929374 ttattcgcgtgttttatcgctttaatagaaatagggtgttaca 21929332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 29163157 - 29163199
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||| ||||||||    
T  29163157 ttattcacgtgttttatcgctttaatagaaatagagcgttaca 29163199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 941272 - 941316
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | ||||||||||||||||||||| |||||||||||||    
T  941272 attattcgcatgttttatcgctttaatagaattagggcgttacat 941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 22468323 - 22468359
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||||||||||||||||||||||||||| ||||||    
T  22468323 cgtgttttatcgctttaatagaaatagggcattacat 22468359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 14150511 - 14150468
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||  ||| |||||||||||||||||||||||||||||||    
T  14150511 attattcgtgtgctttatcgctttaatagaaatagggcgttaca 14150468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 16131189 - 16131146
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||| ||||||||||| ||||||||||||||||| |||||||    
T  16131189 ttattcgcgtgttttatccctttaatagaaatagggtgttacat 16131146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 17375952 - 17375995
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||  ||||||||||||||||||||||||| |||||||||    
T  17375952 attattcgtgtgttttatcgctttaatagaaatatggcgttaca 17375995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 18017752 - 18017713
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgtt 53  Q
    |||||| ||||||||||| |||||||||||||||||||||    
T  18017752 ttattcgcgtgttttatcactttaatagaaatagggcgtt 18017713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 21927493 - 21927524
Alignment:
Q  25 ttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||||||||    
T  21927493 ttttatcgctttaatagaaatagggcgttaca 21927524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 25782599 - 25782642
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||||    
T  25782599 attattcacgtgttttatcactttaatagaagtagggcgttaca 25782642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 25917622 - 25917579
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||||    
T  25917622 attattcgcgtgttttatcactttaatagaattagggcgttaca 25917579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 17791403 - 17791445
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| | |||||||||||||||||||||||||||| |||||    
T  17791403 ttattcgcttgttttatcgctttaatagaaatagggcattaca 17791445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 15081093 - 15081137
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | |||||||| |||||||||||||||||| |||||||    
T  15081093 attattcgcatgttttattgctttaatagaaatagggtgttacat 15081137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 25369680 - 25369724
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | |||||||| |||||||||||||||||| |||||||    
T  25369680 attattcgcatgttttattgctttaatagaaatagggtgttacat 25369724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 24271981 - 24271938
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  24271981 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 24271938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 19643805 - 19643763
Alignment:
Q  12 gattattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  19643805 gattattcgcgtgttttatcgctttaatagaaatagggcgtta 19643763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 19436160 - 19436204
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||    
T  19436160 attattcgcgtgttttatcgctttaatagaaatagggtgttacat 19436204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 6092386 - 6092343
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||| |||||||||||||||    
T  6092386 attattcgcgtgttttatcgctttaataaaaatagggcgttaca 6092343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 19648018 - 19647975
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  19648018 attattcgcttgttttatcgctttaatagaaatagggcgttaca 19647975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 24381704 - 24381661
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  24381704 attattcgcgtgttttatcgctttaatagaagtagggcgttaca 24381661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 25303518 - 25303476
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| || |||||||||||||||||||||||||||||||||    
T  25303518 ttattcgcgagttttatcgctttaatagaaatagggcgttaca 25303476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 25593170 - 25593128
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  25593170 ttattcgcgtgttttatcgctttaatagaaatagggtgttaca 25593128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 32738398 - 32738356
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  32738398 ttattcgcgtgttttaccgctttaatagaaatagggcgttaca 32738356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 45620681 - 45620723
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| | ||||||||||||||||||||||||||||||||||    
T  45620681 ttattcgcatgttttatcgctttaatagaaatagggcgttaca 45620723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 43640281 - 43640240
Alignment:
Q  15 tattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||| |||||||||||||||||||| |||||||||||||||    
T  43640281 tattcgcgtgttttatcgctttaatataaatagggcgttaca 43640240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 9783106 - 9783149
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||    
T  9783106 attattcgcgtgttttatcgctttaatataaatagggtgttaca 9783149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 20021806 - 20021763
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| || |||||||||    
T  20021806 attattcacgtgttttatcgctttaatagaagtatggcgttaca 20021763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 30995221 - 30995264
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||  ||||||||||||||||||| |||||||||||||||    
T  30995221 attattcgtgtgttttatcgctttaataaaaatagggcgttaca 30995264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 32463848 - 32463805
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | |||||||| |||||||||||||||||||||||||    
T  32463848 attattcgcatgttttattgctttaatagaaatagggcgttaca 32463805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34875962 - 34875919
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||    
T  34875962 attattcgcatgttttatcgctttaatagaagtagggcgttaca 34875919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 20270851 - 20270819
Alignment:
Q  25 ttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||||||||||||||||||||| |||||||    
T  20270851 ttttatcgctttaatagaaatagggtgttacat 20270819  T

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Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 21193094 - 21193051
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  21193094 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 21193051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 40555308 - 40555265
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  40555308 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 40555265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 50002186 - 50002229
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  50002186 attattcgcgtgttttatcgctttaatagaaatagggcgttaca 50002229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 57
Target Start/End: Complemental strand, 52397596 - 52397549
Alignment:
Q  10 tagattattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  52397596 tagattattcgcgtgttttatcgctttaatagaaataaggcgttacat 52397549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 17606858 - 17606816
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  17606858 ttattcgcgtgttttatcgctttaatagaaatagggcgttaca 17606816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 21041725 - 21041679
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacatat 59  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  21041725 attattcgcgtgttttatcgctttaatagaagtagggcgttacatat 21041679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 78732 - 78775
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||| |||||||||||||||||    
T  78732 attattcgcgtgttttatcgctttaacagaaatagggcgttaca 78775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 18164144 - 18164101
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  18164144 attattcgcgtgttttattgctttaatagaaatagggcgttaca 18164101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 20957269 - 20957312
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||    
T  20957269 attattcgcgtgtttaatcgctttaatagaaatagggcgttaca 20957312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 25091006 - 25090964
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||| ||||||||||||    
T  25091006 ttattcgcgtgttttatcgctttaatagaagtagggcgttaca 25090964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 27672719 - 27672677
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  27672719 ttattcgcgtgttttaccgctttaatagaaatagggcgttaca 27672677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 46143711 - 46143666
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||||    
T  46143711 attattcgcgtgttttatcgatttaatataaatagggcgttacata 46143666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 21223655 - 21223611
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| ||||||||||||||||||||||| ||| |||||||||    
T  21223655 attattcacgtgttttatcgctttaatagaagtagagcgttacat 21223611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 37236198 - 37236242
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| ||||||||| |||||||||||||| ||||||||||||    
T  37236198 attattcgcgtgttttaccgctttaatagaaacagggcgttacat 37236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 20191687 - 20191652
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||||||||||||||||||||| ||||||||||    
T  20191687 gtgttttatcgctttaatagaaataaggcgttacat 20191652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 29217090 - 29217047
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||| || ||||||    
T  29217090 attattcgcgtgttttatcgctttaatagaaatatggtgttaca 29217047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 4983 - 5025
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  4983 ttattcgcgtgttttatcgctttaatagaaatagggcgttaca 5025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 5690 - 5649
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  5690 attattcgcgtgttttatcgctttaatagaaatagggcgtta 5649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 106850 - 106895
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||    
T  106850 attattcgcttgttttatcgctttaatagaaatagggcgttacata 106895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 122190 - 122231
Alignment:
Q  15 tattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  122190 tattcgcgtgttttatcgctttaatagaaatagggcgttaca 122231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 102036 - 102080
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | ||||||||| |||||||||||||||||||||||||    
T  102036 attattcgcatgttttatccctttaatagaaatagggcgttacat 102080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 3266 - 3314
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacatatat 61  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| ||||    
T  3266 attattcgcgtgttttatcgctttaatggaaatagggcgttacacatat 3314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 199586 - 199626
Alignment:
Q  16 attctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  199586 attcgcgtgttttatcgctttaatagaaatagggcgttaca 199626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1949 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1949
Description:

Target: scaffold1949; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 1134 - 1091
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||    
T  1134 attattcgcgtgttttatcgctttaatggaaatagggcgttaca 1091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 2211 - 2254
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||    
T  2211 attattcacgtgttttatcgctttaatagaaatagggtgttaca 2254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 14348 - 14391
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||    
T  14348 attattcacatgttttatcgctttaatagaattagggcgttaca 14391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 7426 - 7461
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||||||||||||    
T  7426 cgtgttttatcgctttaatagaaatagggcgttaca 7461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 11369 - 11326
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  11369 ttattcgcgtgttttatcgccttaatagaaatagggcgttacat 11326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 7381 - 7424
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||| |||||||||||||||||||||||    
T  7381 attattcgcgtgttttatcgatttaatagaaatagggcgttaca 7424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 34385 - 34428
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  34385 attattcgcgtgtattatcgctttaatagaaatagggcgttaca 34428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 99431 - 99474
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  99431 attattcgcgtgttttatcgctttaatagaaataggacgttaca 99474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 70540 - 70583
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||| |||||||||||||    
T  70540 attattcgcgtgttttatcgctttaatagacatagggcgttaca 70583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 99182 - 99225
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||    
T  99182 attattcacgtgtattatcgctttaatagaaatagggcgttaca 99225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 84357 - 84314
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||    
T  84357 attattcacgtattttatcgctttaatagaaatagggcgttaca 84314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 141494 - 141537
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||||||||||||||||||||||| |||||    
T  141494 attattcacgtgttttatcgctttaatagaaatagggccttaca 141537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 7018 - 6976
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  7018 ttattcgcgtgttttatcgctttaatagaaatagggtgttaca 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 9292 - 9246
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacatat 59  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||    
T  9292 attattcgcgtgttttatcgctttaatagaaatagggtgttatatat 9246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 2359 - 2401
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  2359 ttattcgcgtgttttatcgctttaatagaaatagggtgttaca 2401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 73525 - 73567
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||||||||||||||||||| ||| |||||    
T  73525 ttattcgcgtgttttatcgctttaatagaaatatggcattaca 73567  T

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Target: scaffold0017 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 10217 - 10175
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  10217 ttattcgcgtgttttatcgctttaatagaaatatggcgttaca 10175  T

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Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 3626 - 3659
Alignment:
Q  23 tgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||||||||||    
T  3626 tgttttatcgctttaatagaaatagggcgttaca 3659  T

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Target: scaffold0329 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 56
Target Start/End: Complemental strand, 1053 - 1012
Alignment:
Q  15 tattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  1053 tattcacgtgttttatcgctttaatagaagtagggcgttaca 1012  T

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Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 54
Target Start/End: Complemental strand, 8238 - 8197
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgtta 54  Q
    ||||||| ||||||||||||||||||||||| ||||||||||    
T  8238 attattcgcgtgttttatcgctttaatagaagtagggcgtta 8197  T

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Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 22801 - 22846
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||    
T  22801 attattcgcgtgttttatcactttaatagaaatagggctttacata 22846  T

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Target: scaffold0174; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 499 - 464
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||||||||||||||||||||||| ||||||||    
T  499 cgtgttttatcgctttaatagaaatagtgcgttaca 464  T

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Target: scaffold0219 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 26265 - 26301
Alignment:
Q  21 cgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||||||||||||||||||||||||| |||||||    
T  26265 cgtgttttatcgctttaatagaaatagggtgttacat 26301  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 56
Target Start/End: Complemental strand, 33399 - 33367
Alignment:
Q  24 gttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||||||||||||||||||||||||||||||    
T  33399 gttttatcgctttaatagaaatagggcgttaca 33367  T

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Target: scaffold0557 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 458 - 501
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||    
T  458 attattcacatgttttatcgctttaatagaattagggcgttaca 501  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 12895 - 12938
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||    
T  12895 attattcgcgtgatttatcgctttaatagaaataggacgttaca 12938  T

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Target: scaffold0331 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Complemental strand, 6210 - 6175
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaataggg 49  Q
    |||||| |||||||||||||||||||||||||||||    
T  6210 ttattcacgtgttttatcgctttaatagaaataggg 6175  T

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Target: scaffold0231 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 16094 - 16137
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||    
T  16094 attattcgcgtgttttatcgctttaatagaagtagggtgttaca 16137  T

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Target: scaffold0231; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Original strand, 15581 - 15623
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||||||||||||||||| ||| ||||||||    
T  15581 ttattcacgtgttttatcgctttaatagaagtagagcgttaca 15623  T

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Target: scaffold0193 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 2876 - 2833
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||||||||||||||||| ||||| ||||||||||    
T  2876 attattcgcgtgttttatcgctttaatcgaaatggggcgttaca 2833  T

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Target: scaffold0165 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 20079 - 20036
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||| |||||||||||||||||||||||||| |||||    
T  20079 attattcgcgttttttatcgctttaatagaaatagggcattaca 20036  T

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Target: scaffold0151 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 31885 - 31928
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| |||||||||| |||||||||||| ||||||||||||    
T  31885 attattcgcgtgttttattgctttaatagaattagggcgttaca 31928  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 4827 - 4784
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| ||||| |||||||||||||||||||||||| |||||    
T  4827 attattcgcgtgtattatcgctttaatagaaatagggcattaca 4784  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 43839 - 43796
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | |||||||| |||||||||||||||||||||||||    
T  43839 attattcgcttgttttattgctttaatagaaatagggcgttaca 43796  T

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Target: scaffold0066; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 52009 - 51966
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    ||||||| | |||||||| |||||||||||||||||||||||||    
T  52009 attattcgcatgttttattgctttaatagaaatagggcgttaca 51966  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 54
Target Start/End: Complemental strand, 3885 - 3854
Alignment:
Q  23 tgttttatcgctttaatagaaatagggcgtta 54  Q
    ||||||||||||||||||||||||||||||||    
T  3885 tgttttatcgctttaatagaaatagggcgtta 3854  T

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Target: scaffold0216 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 23350 - 23384
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagg 48  Q
    |||||| ||||||||||||||||||||||||||||    
T  23350 ttattcgcgtgttttatcgctttaatagaaatagg 23384  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 1269 - 1227
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| | ||||||| ||||||||||||||||||||||||||    
T  1269 ttattcgcatgttttaccgctttaatagaaatagggcgttaca 1227  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 2419 - 2377
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||| |||||||||||||||||||||| |||||||    
T  2419 ttattcgcgtgtattatcgctttaatagaaataggacgttaca 2377  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 56
Target Start/End: Complemental strand, 29036 - 28994
Alignment:
Q  14 ttattctcgtgttttatcgctttaatagaaatagggcgttaca 56  Q
    |||||| ||||||||| | ||||||||||||||||||||||||    
T  29036 ttattcgcgtgttttacccctttaatagaaatagggcgttaca 28994  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 25609 - 25654
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| | ||||||| |||||||||||||||| |||||||||||    
T  25609 attattcgcatgttttaccgctttaatagaaataaggcgttacata 25654  T

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Target: scaffold0161 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 25314 - 25281
Alignment:
Q  22 gtgttttatcgctttaatagaaatagggcgttac 55  Q
    |||||||||||||||||||||||||| |||||||    
T  25314 gtgttttatcgctttaatagaaatagagcgttac 25281  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 7902 - 7947
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacata 58  Q
    ||||||| | |||||||| |||||||||||||||||| ||||||||    
T  7902 attattcgcatgttttattgctttaatagaaatagggtgttacata 7947  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 6915 - 6867
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacatatat 61  Q
    ||||||| | |||||||| |||||||||||||||||| |||||| ||||    
T  6915 attattcacatgttttattgctttaatagaaatagggtgttacagatat 6867  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 75106 - 75062
Alignment:
Q  13 attattctcgtgttttatcgctttaatagaaatagggcgttacat 57  Q
    ||||||| | ||||| || ||||||||||||||||||||||||||    
T  75106 attattcgcatgtttaattgctttaatagaaatagggcgttacat 75062  T

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