View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1590_low_93 (Length: 250)
Name: NF1590_low_93
Description: NF1590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1590_low_93 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 19 - 242
Target Start/End: Original strand, 34078201 - 34078424
Alignment:
| Q |
19 |
cttgtggccctgcagatttagaaccaaaatattgttttcctaacaacattctagtgacattgttcattgaaaaagcacccaaaatttctcttaaattaat |
118 |
Q |
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| T |
34078201 |
cttgtggccctgcagatttagaaccaaaatattgttttcctaacaacattctagtgacattgttcattgaaaaagcacccaaaatttctcttaaattaat |
34078300 |
T |
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| Q |
119 |
gggattttcgaaattggcccgtgcaaaaacatctttaacaagatgttgtgcttcttcttgacgatgttttgagaaggattcaagtctctttgtagttagt |
218 |
Q |
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|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34078301 |
gggattttcggatttggcccgtgcaaaaacatctttaacaagatgttgtgcttcttcttgacgatgttttgagaaggattcaagtctctttgtagttagt |
34078400 |
T |
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| Q |
219 |
aagtgttccatgcaaattcttctc |
242 |
Q |
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|||||||||||||||||||||||| |
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| T |
34078401 |
aagtgttccatgcaaattcttctc |
34078424 |
T |
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