View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1590_low_95 (Length: 249)
Name: NF1590_low_95
Description: NF1590
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1590_low_95 |
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Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 33036662 - 33036417
Alignment:
| Q |
1 |
catgttccactgtcttagcacatacatactatcaaatcattaatgggatgctattactaataaagagcttatgtgaattggataggtgcatttgtttatc |
100 |
Q |
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| T |
33036662 |
catgttccactgtcttagcacatacatactatcaaatcattaatgggatgctattactaataaaaagcttatgtgaattagataggtgcatttgtttatc |
33036563 |
T |
|
| Q |
101 |
tcaaaatcaattactataaacaaacattatttatttgtaactaaccgaaccagatggcaagaggaaaaacaagaacaacaaggagtgtatcatttgaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33036562 |
tcaaaatcaattactataaacaaacattatttatttgtaactaaccgaaccagatggcaagaggaaaaacaagaacaacaaggagtgtatcatttgaatg |
33036463 |
T |
|
| Q |
201 |
tatccctataagtacaacttctcccataggtatgttcatctcactc |
246 |
Q |
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|||| ||||||||||||||||||||||||||||||||| ||||||| |
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| T |
33036462 |
tatcactataagtacaacttctcccataggtatgttcacctcactc |
33036417 |
T |
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