View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1591-INSERTION-1 (Length: 254)
Name: NF1591-INSERTION-1
Description: NF1591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1591-INSERTION-1 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 6 - 254
Target Start/End: Original strand, 31815956 - 31816206
Alignment:
| Q |
6 |
caataacaaataacaacataaattaattagacaattaannnnnnn-ctccaaaatgcagatggctactcctatccgtagtagaactgccatagtgta-gc |
103 |
Q |
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| T |
31815956 |
caataacaaataacaacataaattaattagacaattaaggggggggctccaaaatgcagatggctactcctatccgtagtagaactgccatagtgtaagc |
31816055 |
T |
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| Q |
104 |
atacaggaaattaagttaaataatggagaccaagctcatctccaatctaacactatgatgttattcaaaaattgtaatagtcaactaacttaagcctttg |
203 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
31816056 |
atacagaaaattaagttaaataatggagaccaagctcatctccaatctaacactatgatgttattcaaaaaatgtaatagtcaactaacttaagcctttg |
31816155 |
T |
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| Q |
204 |
gactcaaagataatgtaatatcttgaaaaaccttgagcctcctcttgtcaa |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31816156 |
gactcaaagataatgtaatatcttgaaaaaccttgagcctcctcttgtcaa |
31816206 |
T |
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