View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1591-INSERTION-6 (Length: 750)

Name: NF1591-INSERTION-6
Description: NF1591
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1591-INSERTION-6
NF1591-INSERTION-6
[»] chr5 (30 HSPs)
chr5 (108-555)||(22655161-22655607)
chr5 (612-747)||(22654969-22655104)
chr5 (458-555)||(42086334-42086431)
chr5 (458-542)||(9805011-9805095)
chr5 (458-542)||(23383664-23383748)
chr5 (458-549)||(7308373-7308464)
chr5 (460-555)||(40117424-40117519)
chr5 (458-555)||(5731923-5732020)
chr5 (458-555)||(19572731-19572828)
chr5 (476-554)||(3653918-3653996)
chr5 (476-538)||(20255394-20255456)
chr5 (458-555)||(1538438-1538535)
chr5 (458-555)||(8513526-8513623)
chr5 (458-555)||(25417186-25417283)
chr5 (479-555)||(14588620-14588696)
chr5 (477-555)||(14728109-14728187)
chr5 (458-555)||(12705021-12705118)
chr5 (458-535)||(23247374-23247451)
chr5 (458-535)||(35813021-35813098)
chr5 (458-510)||(28857135-28857187)
chr5 (476-547)||(9168264-9168335)
chr5 (472-535)||(15034096-15034159)
chr5 (476-506)||(19839352-19839382)
chr5 (476-538)||(20705588-20705650)
chr5 (472-542)||(42861234-42861304)
chr5 (476-509)||(7336645-7336678)
chr5 (458-555)||(9812879-9812976)
chr5 (458-539)||(20525845-20525926)
chr5 (458-539)||(30995128-30995209)
chr5 (458-555)||(38897722-38897818)
[»] chr4 (37 HSPs)
chr4 (458-535)||(36145238-36145315)
chr4 (458-555)||(40780864-40780961)
chr4 (458-555)||(42722580-42722677)
chr4 (458-542)||(40272347-40272431)
chr4 (458-555)||(16450311-16450408)
chr4 (458-555)||(47078469-47078566)
chr4 (458-555)||(55921045-55921142)
chr4 (458-548)||(5472858-5472948)
chr4 (458-555)||(36262770-36262865)
chr4 (458-555)||(7246649-7246746)
chr4 (458-539)||(29895798-29895879)
chr4 (460-525)||(55005339-55005404)
chr4 (458-542)||(8889033-8889117)
chr4 (458-510)||(38075444-38075496)
chr4 (458-542)||(52950093-52950177)
chr4 (458-555)||(1940780-1940874)
chr4 (476-555)||(2559336-2559415)
chr4 (476-542)||(53354561-53354627)
chr4 (458-531)||(1446837-1446910)
chr4 (458-555)||(20128320-20128417)
chr4 (460-525)||(35359749-35359814)
chr4 (458-555)||(38166038-38166135)
chr4 (458-539)||(53599071-53599152)
chr4 (458-542)||(3159485-3159569)
chr4 (458-538)||(6779222-6779302)
chr4 (458-542)||(26237438-26237522)
chr4 (458-509)||(10541027-10541078)
chr4 (476-555)||(16645147-16645226)
chr4 (476-555)||(17080072-17080151)
chr4 (458-509)||(24166461-24166512)
chr4 (458-509)||(29588747-29588798)
chr4 (456-510)||(20421782-20421836)
chr4 (489-555)||(21429343-21429409)
chr4 (476-542)||(49260681-49260747)
chr4 (458-555)||(4738629-4738726)
chr4 (458-531)||(8064825-8064898)
chr4 (476-541)||(38168286-38168350)
[»] chr7 (29 HSPs)
chr7 (458-553)||(36619259-36619354)
chr7 (458-555)||(38578870-38578967)
chr7 (458-555)||(39474949-39475046)
chr7 (458-555)||(43861975-43862072)
chr7 (476-552)||(45697196-45697272)
chr7 (458-539)||(26423306-26423387)
chr7 (458-542)||(13095867-13095951)
chr7 (458-549)||(22973976-22974067)
chr7 (458-549)||(43925521-43925612)
chr7 (459-542)||(47341886-47341969)
chr7 (458-555)||(10047879-10047976)
chr7 (458-539)||(10317765-10317845)
chr7 (458-555)||(18785678-18785775)
chr7 (458-555)||(27028288-27028385)
chr7 (458-555)||(48804692-48804789)
chr7 (458-542)||(17748398-17748482)
chr7 (463-535)||(45960026-45960098)
chr7 (458-509)||(1797469-1797520)
chr7 (460-555)||(27875091-27875186)
chr7 (479-542)||(41267940-41268003)
chr7 (476-555)||(48224734-48224813)
chr7 (476-555)||(48244359-48244438)
chr7 (458-523)||(365149-365214)
chr7 (458-555)||(34659235-34659332)
chr7 (459-554)||(5039422-5039517)
chr7 (459-554)||(23658189-23658284)
chr7 (458-555)||(8734689-8734786)
chr7 (458-555)||(14650326-14650423)
chr7 (471-555)||(23060701-23060783)
[»] scaffold0291 (1 HSPs)
scaffold0291 (458-555)||(6864-6961)
[»] scaffold0170 (1 HSPs)
scaffold0170 (460-553)||(9856-9949)
[»] chr8 (19 HSPs)
chr8 (458-555)||(45521179-45521275)
chr8 (458-554)||(18374020-18374116)
chr8 (460-555)||(4479299-4479393)
chr8 (458-549)||(6100482-6100573)
chr8 (458-549)||(8141112-8141203)
chr8 (458-555)||(14666074-14666171)
chr8 (458-542)||(10927616-10927700)
chr8 (460-555)||(43032913-43033008)
chr8 (458-542)||(14846586-14846669)
chr8 (476-535)||(583840-583899)
chr8 (476-555)||(3418516-3418595)
chr8 (471-548)||(2209806-2209883)
chr8 (458-546)||(33401811-33401899)
chr8 (460-552)||(34710573-34710665)
chr8 (458-549)||(1012986-1013077)
chr8 (458-509)||(17981451-17981502)
chr8 (458-539)||(9860014-9860095)
chr8 (458-555)||(15884559-15884655)
chr8 (458-499)||(22810090-22810130)
[»] chr6 (20 HSPs)
chr6 (458-555)||(21898658-21898755)
chr6 (459-542)||(11142614-11142697)
chr6 (458-555)||(5253226-5253323)
chr6 (472-550)||(8888906-8888984)
chr6 (458-555)||(8611977-8612074)
chr6 (458-539)||(9179755-9179836)
chr6 (458-555)||(12635824-12635921)
chr6 (458-555)||(29444768-29444865)
chr6 (458-542)||(5029827-5029911)
chr6 (458-526)||(9147311-9147379)
chr6 (476-548)||(10311479-10311551)
chr6 (458-510)||(14107406-14107458)
chr6 (460-555)||(3601096-3601191)
chr6 (476-555)||(9633628-9633707)
chr6 (476-554)||(2271307-2271385)
chr6 (457-555)||(8938720-8938818)
chr6 (458-555)||(6606100-6606197)
chr6 (458-555)||(13036007-13036104)
chr6 (458-555)||(19089508-19089605)
chr6 (458-555)||(34954622-34954719)
[»] chr1 (29 HSPs)
chr1 (458-555)||(41663860-41663957)
chr1 (458-555)||(49078121-49078218)
chr1 (458-542)||(5855529-5855613)
chr1 (458-542)||(15465972-15466056)
chr1 (458-555)||(26325819-26325916)
chr1 (458-555)||(45361886-45361983)
chr1 (458-542)||(5504038-5504122)
chr1 (458-542)||(17642021-17642105)
chr1 (458-510)||(28324629-28324681)
chr1 (458-542)||(34719783-34719867)
chr1 (471-555)||(16956486-16956570)
chr1 (458-541)||(9659197-9659279)
chr1 (458-549)||(10336523-10336614)
chr1 (458-509)||(50503411-50503462)
chr1 (458-555)||(8763998-8764095)
chr1 (458-542)||(11397906-11397989)
chr1 (458-554)||(30927732-30927828)
chr1 (458-510)||(48798119-48798171)
chr1 (458-513)||(16263552-16263607)
chr1 (458-549)||(17358481-17358572)
chr1 (458-541)||(18915874-18915957)
chr1 (458-549)||(21849215-21849305)
chr1 (458-549)||(32150932-32151023)
chr1 (458-509)||(43959871-43959922)
chr1 (476-537)||(10422813-10422874)
chr1 (458-507)||(18649404-18649453)
chr1 (458-555)||(26660145-26660241)
chr1 (460-509)||(33004065-33004114)
chr1 (478-535)||(33498863-33498920)
[»] scaffold0016 (1 HSPs)
scaffold0016 (458-542)||(8717-8801)
[»] chr3 (40 HSPs)
chr3 (458-542)||(50405620-50405704)
chr3 (472-555)||(35998575-35998658)
chr3 (472-542)||(24506665-24506735)
chr3 (458-555)||(30045827-30045924)
chr3 (472-549)||(43330742-43330819)
chr3 (458-555)||(47219150-47219247)
chr3 (458-555)||(54261232-54261329)
chr3 (458-549)||(26043818-26043909)
chr3 (458-555)||(7328850-7328946)
chr3 (478-555)||(23511593-23511670)
chr3 (458-555)||(28572215-28572312)
chr3 (458-555)||(45877460-45877557)
chr3 (458-555)||(51060285-51060382)
chr3 (458-542)||(29127925-29128009)
chr3 (458-542)||(35315962-35316046)
chr3 (476-555)||(3136698-3136777)
chr3 (458-509)||(4638160-4638211)
chr3 (458-541)||(25294966-25295049)
chr3 (471-542)||(34374459-34374530)
chr3 (476-535)||(45450471-45450530)
chr3 (458-549)||(49198357-49198448)
chr3 (459-509)||(15795544-15795593)
chr3 (458-504)||(51683009-51683055)
chr3 (490-535)||(15285757-15285802)
chr3 (460-541)||(29135921-29136002)
chr3 (458-555)||(33251668-33251765)
chr3 (459-543)||(40944890-40944973)
chr3 (476-555)||(3507537-3507616)
chr3 (458-509)||(31072884-31072935)
chr3 (491-542)||(45402368-45402419)
chr3 (488-554)||(40660332-40660398)
chr3 (489-555)||(49021207-49021273)
chr3 (459-509)||(52364850-52364900)
chr3 (474-555)||(2029271-2029352)
chr3 (460-537)||(3755578-3755655)
chr3 (458-555)||(13893932-13894029)
chr3 (462-555)||(29762159-29762252)
chr3 (458-555)||(30767251-30767348)
chr3 (472-521)||(41223076-41223125)
chr3 (458-531)||(42412802-42412875)
[»] scaffold0002 (2 HSPs)
scaffold0002 (458-555)||(579-676)
scaffold0002 (471-540)||(319444-319513)
[»] chr2 (38 HSPs)
chr2 (458-535)||(15234084-15234161)
chr2 (458-555)||(25540407-25540504)
chr2 (458-555)||(41220641-41220738)
chr2 (458-509)||(21286450-21286501)
chr2 (459-542)||(22593142-22593224)
chr2 (460-549)||(6358160-6358249)
chr2 (458-555)||(12455316-12455413)
chr2 (458-534)||(2528365-2528441)
chr2 (476-540)||(3643905-3643969)
chr2 (458-542)||(10026632-10026716)
chr2 (458-542)||(10046493-10046576)
chr2 (458-542)||(10669598-10669682)
chr2 (459-555)||(16325602-16325698)
chr2 (476-548)||(38962787-38962859)
chr2 (458-541)||(331507-331590)
chr2 (458-549)||(3811700-3811791)
chr2 (460-555)||(12864232-12864327)
chr2 (460-542)||(39201524-39201606)
chr2 (458-547)||(3848925-3849014)
chr2 (458-555)||(7747280-7747377)
chr2 (458-555)||(14169612-14169709)
chr2 (458-555)||(18902533-18902630)
chr2 (458-539)||(38005408-38005489)
chr2 (458-555)||(39806888-39806985)
chr2 (458-555)||(41031909-41032006)
chr2 (458-547)||(45263678-45263767)
chr2 (489-541)||(18649043-18649095)
chr2 (458-554)||(24179575-24179670)
chr2 (471-555)||(34346290-34346374)
chr2 (458-509)||(8410137-8410188)
chr2 (458-549)||(37560179-37560270)
chr2 (475-510)||(41187872-41187907)
chr2 (458-549)||(42770660-42770751)
chr2 (458-509)||(44139490-44139541)
chr2 (476-534)||(10106612-10106670)
chr2 (458-555)||(10823066-10823163)
chr2 (460-509)||(29653635-29653684)
chr2 (458-555)||(34356212-34356309)
[»] scaffold0223 (1 HSPs)
scaffold0223 (458-541)||(16888-16971)
[»] scaffold0209 (1 HSPs)
scaffold0209 (476-535)||(12600-12659)
[»] scaffold0006 (1 HSPs)
scaffold0006 (458-555)||(68526-68620)
[»] scaffold0005 (1 HSPs)
scaffold0005 (458-509)||(271123-271174)
[»] scaffold0010 (1 HSPs)
scaffold0010 (460-542)||(155727-155809)
[»] scaffold0316 (1 HSPs)
scaffold0316 (458-555)||(1617-1714)
[»] scaffold0009 (1 HSPs)
scaffold0009 (458-555)||(42835-42932)
[»] scaffold0635 (1 HSPs)
scaffold0635 (476-534)||(2114-2172)


Alignment Details
Target: chr5 (Bit Score: 396; Significance: 0; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 108 - 555
Target Start/End: Complemental strand, 22655607 - 22655161
Alignment:
Q  108 cttgtttaaaagtgtacatataatttcaaaaacaagctaatgtaaaatcataatttagagggaaaatcattactatctggtatatgatggaagcaacggt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22655607 cttgtttaaaagtgtacatataatttcaaaaacaagctaatgtaaaatcataatttagagggaaaatcattactatctggtatatgatggaagcaacggt 22655508  T
Q  208 aatagtcatgaattttccagcaaaagaatcagaaatgaaggcaccaagcaatggtgtcaagcttgaagttcctccaaagttagtgagagtgttagcagct 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22655507 aatagtcatgaattttccagcaaaagaatcagaaatgaaggcaccaagcaatggtgtcaagcttgaagttcctccaaagttagtgagagtgttagcagct 22655408  T
Q  308 tttgttaatggcatgtgaagctgtgttgttaggtagtttatcatgtttgcattgaaacccaccactgctaacttctcagtaacctcgttagctgcaacaa 407  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22655407 tttgttaatggcatgtgaagctgtgttgttaggtagcttatcatgtttgcattgaaacccaccactgctaacttctcagtaacctcattagctgcaacaa 22655308  T
Q  408 cagaaaattaaatcaacattaatatttctatagtttactatctaacccctggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacg 507  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| | |||||||||| |||||||||||||    
T  22655307 cagaaaattaaatcaacattaatatttctttagtttactatctaacccctggttcgattcccaggggaaacaatgtttgatcagtgtgcatgcctctacg 22655208  T
Q  508 cataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||  |||||||||| ||||||| ||||||| ||||||||||||    
T  22655207 cataagtcagattagtcgtccaccttt-gtgggtcgaaaaccagtgcg 22655161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 4e-68
Query Start/End: Original strand, 612 - 747
Target Start/End: Complemental strand, 22655104 - 22654969
Alignment:
Q  612 gagttagggtttcaaagcataccaaagataaaaggcattgttgcaagccctccttttttccttctagtaagaataccattcttctccatcttttcaaaac 711  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22655104 gagttagggtttcaaagcataccaaagataaaaggcattgttgcaagccctccttttttccttctagtaagattaccattcttctccatcttttcaaaac 22655005  T
Q  712 ctgtattcattttgcagtacattaaatgactaatat 747  Q
    ||||||||||||||||||||||||||||||||||||    
T  22655004 ctgtattcattttgcagtacattaaatgactaatat 22654969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 42086334 - 42086431
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||||||||| |||||||||||||||||||||| ||   |||||||||| |||||||||||||||  ||||| |||||    
T  42086334 ggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcg 42086431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 9805011 - 9805095
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||||||||| ||   |||||||||| |||||||||||||||    
T  9805011 ggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtc 9805095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 23383664 - 23383748
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||| |||| |||||||||||  |||||||| ||||||||||||| ||   |||||||||| |||||||||||||||    
T  23383664 ggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtc 23383748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 549
Target Start/End: Complemental strand, 7308464 - 7308373
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||||| |||| |||||||||||  |||||| ||||||||||||||| ||   ||||||||| ||||||||| ||| |||||||||    
T  7308464 ggttcgattcccagggggaacaacgcttgggcagtgcacatgcctctacgcatgagccggattagtcgctcacctttgatggatcaaaaacc 7308373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 555
Target Start/End: Original strand, 40117424 - 40117519
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||| || |||| |||||||||||  |||||||||||||||||||||| ||   ||||| ||||||||||||||||| || |||||| |||||    
T  40117424 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttggtggatcgaaaaccggtgcg 40117519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 5732020 - 5731923
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| || | |||||||||||  ||||||||||||||||||| || ||   |||||||||||||||||| |||||||  ||||| |||||    
T  5732020 ggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgtatgagccagattagtcgttcacctttagtgggtcggaaaccggtgcg 5731923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 19572731 - 19572828
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| ||||||| |||| |||||| ||||  |||||||||||||||||||||| ||   ||||||||||||||| |||||||||   |||||||||||    
T  19572731 ggttagattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtgggttggaaaccagtgcg 19572828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 554
Target Start/End: Complemental strand, 3653996 - 3653918
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgc 554  Q
    |||||||||||| |||||||||||||||||||||  ||   |||||||||| |||||||||||| || |||||| ||||    
T  3653996 aacaacgcttgaccagtgcgcatgcctctacgcacgaggcggattagtcgtccacctttggtggatcgaaaaccggtgc 3653918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 476 - 538
Target Start/End: Original strand, 20255394 - 20255456
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtg 538  Q
    |||||| ||||| |||||||||||||||||||||| |||  |||||||||| |||||||||||    
T  20255394 aacaacacttgaccagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggtg 20255456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 1538438 - 1538535
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||||||||||| ||   ||||| |||| |||| ||||||||||  ||||| |||||    
T  1538438 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtcggaaaccggtgcg 1538535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 8513526 - 8513623
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  |||||||||| |||||  |||||| ||||||||||||||  ||   |||||||||| |||||||||||||||  ||||| |||||    
T  8513526 ggttcgattcctaggggaaacaatgcttggccagtgcacatgcctctacgcacgagccagattagtcgtccacctttggtgggtcggaaaccggtgcg 8513623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 25417283 - 25417186
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||||||||  ||||||||||||||||||| |  ||   |||||||| || ||| ||||||||||| ||||| |||||    
T  25417283 ggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgaacgagccggattagtcatttaccattggtgggtcagaaaccggtgcg 25417186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 555
Target Start/End: Complemental strand, 14588696 - 14588620
Alignment:
Q  479 aacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| |||||||||||||||||||||| ||   |||||||||| ||||||||||| | | |||||| |||||    
T  14588696 aacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgagccgaaaaccggtgcg 14588620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 555
Target Start/End: Original strand, 14728109 - 14728187
Alignment:
Q  477 acaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| ||||||||||||||||||||||| ||   ||||||| | ||||||||| ||||||  ||||| |||||    
T  14728109 acaacgcttggtcagtgcgcatgcctctacgcatgagccggattagttgctcacctttgatgggtcggaaaccggtgcg 14728187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 12705021 - 12705118
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  || | |||||||||||| ||||| |||||| ||||||||| |    |||||||||  |||||||||||||||| ||||| |||||    
T  12705021 ggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcg 12705118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 535
Target Start/End: Complemental strand, 23247451 - 23247374
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||||||| || | |||||||||||||||||  |||||||||||||||  ||   |||||||||| ||||||||    
T  23247451 ggttcgattcccaggaggaacaacgcttgatcagtatgcatgcctctacgcacgagccagattagtcgtccacctttg 23247374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 535
Target Start/End: Complemental strand, 35813098 - 35813021
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||||||  ||||||| || |||||| ||||||||||| |||||| ||| |||  |||||||||| ||||||||    
T  35813098 ggttcgattcctaggggaaataatgcttgaccagtgcgcatgtctctacacatgagtcggattagtcgtccacctttg 35813021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 28857135 - 28857187
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcat 510  Q
    |||||||||||| |||| |||||| ||||  ||||||||||||||||||||||    
T  28857135 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcat 28857187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 9168335 - 9168264
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaa 547  Q
    |||||||||||  |||||||||| ||||||||||| ||   |||||||||| ||||||| ||||||| ||||    
T  9168335 aacaacgcttggccagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaa 9168264  T

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Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 535
Target Start/End: Original strand, 15034096 - 15034159
Alignment:
Q  472 gggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||||| |||| |||||| |||||||||||||||| ||  |||||||| || ||||||||    
T  15034096 gggaaacaacacttggtcagtgtgcatgcctctacgcatgagcctgattagttgtccacctttg 15034159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 476 - 506
Target Start/End: Original strand, 19839352 - 19839382
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctac 506  Q
    |||||||||||||||||||||||||||||||    
T  19839352 aacaacgcttgatcagtgcgcatgcctctac 19839382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 476 - 538
Target Start/End: Original strand, 20705588 - 20705650
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtg 538  Q
    ||||||| ||| ||||||||||||||||||||||||||   ||||| ||||||| | ||||||    
T  20705588 aacaacgtttggtcagtgcgcatgcctctacgcataaggcagattaatcgttcatcattggtg 20705650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 472 - 542
Target Start/End: Complemental strand, 42861304 - 42861234
Alignment:
Q  472 gggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| ||||  |||||||||||||||||||||| ||   ||||| |||| |||| ||||||||||    
T  42861304 gggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgtccaccattggtgggtc 42861234  T

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Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 509
Target Start/End: Original strand, 7336645 - 7336678
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||| |||||||||||||||||||||||    
T  7336645 aacaacgctttatcagtgcgcatgcctctacgca 7336678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 9812879 - 9812976
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  || | |||||||||||  ||||| |||||| ||||||||| |    |||||||||  |||||||||||||||| ||||| |||||    
T  9812879 ggttcgattccgaggaggaacaacgcttggccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcg 9812976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 20525845 - 20525926
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    |||||||||||| || | |||||| |||   |||||||||||||||||||||| ||   |||||||||| |||| |||||||    
T  20525845 ggttcgattcccaggtggaacaacacttcgccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgg 20525926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 30995128 - 30995209
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    |||||||||||| |||| |||||| ||||  ||| |||||||||||||||||  ||   ||||||||| ||| |||||||||    
T  30995128 ggttcgattcccagggggaacaacacttggccagggcgcatgcctctacgcacgagccggattagtcgctcatctttggtgg 30995209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 38897818 - 38897722
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || |||||| |||||||||  |||||||||||||||||||||  ||   ||||||| |  |||||||||||| ||  |||||||||||    
T  38897818 ggttcgatttccaggggaa-caacgcttggccagtgcgcatgcctctacgcacgagccggattagttgcccacctttggtggatcggaaaccagtgcg 38897722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 3e-19; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 458 - 535
Target Start/End: Complemental strand, 36145315 - 36145238
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||   |||||||||| ||||||||    
T  36145315 ggttcgattcccaggggaaacaacgcttgatcagtgcgcatgcctctacacatgagccggattagtcgtccacctttg 36145238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 40780961 - 40780864
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| |  ||| ||||||||||| ||||||||||||||||||||||| ||   |||||||||| |||||||||||||||  ||||| |||||    
T  40780961 ggttcgattctcaaggggaacaacgcttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtcggaaaccggtgcg 40780864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 42722677 - 42722580
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||| |||||| || | |||||||||||  |||||||||||||||||||||| ||   |||||||||||||||||| ||||||| |||||| |||||    
T  42722677 ggttcaattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcgaaaaccggtgcg 42722580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 40272431 - 40272347
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||||| ||  ||| |||||||||||  ||||||||||||||||||||||||||  |||| |||||||||| ||||||||||    
T  40272431 ggttcgatttccatggggaacaacgcttggccagtgcgcatgcctctacgcataagtcggatttgtcgttcaccattggtgggtc 40272347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 16450311 - 16450408
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||||||||  |||||| ||||||||||||||| ||   |||||||||| |||||||||| ||||  ||||| |||||    
T  16450311 ggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcatgagccagattagtcgtccacctttggtaggtcggaaaccggtgcg 16450408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 47078469 - 47078566
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||||||||  |||||| ||||||||||||||  ||   ||||||||| ||||| ||||||||||  |||||||||||    
T  47078469 ggttcgattcccagggggaacaacgcttggccagtgcacatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccagtgcg 47078566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 55921045 - 55921142
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||| |||| |||||||||||||||||||| || ||   ||||| ||| ||||||||||||||||  ||||| |||||    
T  55921045 ggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgtatgagccggattaatcgctcacctttggtgggtcggaaaccggtgcg 55921142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 548
Target Start/End: Complemental strand, 5472948 - 5472858
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaac 548  Q
    |||| ||||| | ||||||||||||||||  |||||||||||||||||||||  ||   |||||||||  ||||||||||||||| |||||    
T  5472948 ggtttgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaac 5472858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 36262865 - 36262770
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||  |||||||||||  |||||| ||||||||||||||  |||  |||||||||  |||||||||||||||| |||||| ||||    
T  36262865 ggttcgattcccaggg--aacaacgcttggccagtgcacatgcctctacgcacgagtcggattagtcgcccacctttggtgggtcagaaaccaatgcg 36262770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 7246746 - 7246649
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  | || |||||||||||  |||||||||||||||||||||| ||   |||||||||  |||||||||||||||  ||||| |||||    
T  7246746 ggttcgattcctagtgggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcg 7246649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 29895798 - 29895879
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||||||||||| ||   |||||||||| |||| |||||||    
T  29895798 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgg 29895879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 460 - 525
Target Start/End: Complemental strand, 55005404 - 55005339
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcg 525  Q
    |||||||| | ||||||||||||||||| || |||||||||||||||||| ||||  |||||||||    
T  55005404 ttcgattcgcaggggaaacaacgcttgaccattgcgcatgcctctacgcacaagtcggattagtcg 55005339  T

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Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 8889033 - 8889117
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||  |||| |||||| ||||  ||||||||||| |||||||||| ||   |||||||||| |||||||||||||||    
T  8889033 ggttcgattcctagggggaacaacacttgggcagtgcgcatggctctacgcatgagccggattagtcgtccacctttggtgggtc 8889117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 38075444 - 38075496
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcat 510  Q
    |||||||||| | ||||||||||||||||  ||||||||||||||||||||||    
T  38075444 ggttcgattctcaggggaaacaacgcttggccagtgcgcatgcctctacgcat 38075496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 52950093 - 52950177
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||| |||| |||||||||||  ||||||||||| |||||| ||| |    |||||||||| |||||||||||||||    
T  52950093 ggttcgattcccagggggaacaacgcttggccagtgcgcatgactctacacatgaaccagattagtcgtccacctttggtgggtc 52950177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 1940874 - 1940780
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||||||||    |||||||||||||||||||  ||   |||||||||  ||||||||||||||| |||||| |||||    
T  1940874 ggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcg 1940780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 555
Target Start/End: Original strand, 2559336 - 2559415
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  ||||||||||||||||||||| |||   ||||| |||| |||||||||||||||  ||||| |||||    
T  2559336 aacaacgcttggccagtgcgcatgcctctacgcacaagccggattactcgtccacctttggtgggtcggaaaccggtgcg 2559415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 476 - 542
Target Start/End: Original strand, 53354561 - 53354627
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||| ||| | |||||||||||||||||||||||| |  ||||||||||||| ||||| ||||||    
T  53354561 aacaacacttaaccagtgcgcatgcctctacgcataaatcggattagtcgttcatctttgatgggtc 53354627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 1446837 - 1446910
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacc 531  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||||||||||| ||   |||||||||| ||||    
T  1446837 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 1446910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 20128320 - 20128417
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| | |||| ||||| |||||  |||||||||||||| ||||||  ||   |||||||||| |||| ||||||||||| ||||| |||||    
T  20128320 ggttcgattctcagggggaacaatgcttggccagtgcgcatgcctttacgcacgagctagattagtcgtccaccattggtgggtcagaaaccggtgcg 20128417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 525
Target Start/End: Original strand, 35359749 - 35359814
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcg 525  Q
    |||||||| | |||| ||||||| |||| ||||||||||||||| ||||||||||  |||||||||    
T  35359749 ttcgattctcagggggaacaacgtttgaccagtgcgcatgcctcaacgcataagttggattagtcg 35359814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 38166038 - 38166135
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| ||||||| |||| |||||||||||  ||||||||||| |||||||||  ||   |||||||||  |||||||||||||||  ||||| |||||    
T  38166038 ggttggattcccagggggaacaacgcttggccagtgcgcatggctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcg 38166135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 53599071 - 53599152
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    |||||||||||| || | ||||||| |||  |||||||||||||||||||||| ||   ||||| |||||||||||| ||||    
T  53599071 ggttcgattcccaggaggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattaatcgttcacctttagtgg 53599152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 3159569 - 3159485
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||| | || |||| |||||||||||  |||||||||||||||||||||  ||   ||||||||| ||||| ||||||||||    
T  3159569 ggttcgacttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccagattagtcgctcaccattggtgggtc 3159485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 538
Target Start/End: Original strand, 6779222 - 6779302
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtg 538  Q
    |||||||||||| |||| |||||| | ||  ||||||||||||||||| |||| ||   |||||||||| |||||||||||    
T  6779222 ggttcgattcccagggggaacaacacctggccagtgcgcatgcctctatgcatgagccggattagtcgtccacctttggtg 6779302  T

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Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 26237522 - 26237438
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| | |||||||||||| |||||||||||| ||| || ||||||| |||  ||||||| || |||| ||| ||||||    
T  26237522 ggttcgattctcaggggaaacaacgtttgatcagtgcgtatgtctttacgcatgagtcggattagtagtccaccattgatgggtc 26237438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 10541027 - 10541078
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    ||||||||| || ||||||||||||||||  ||||| |||||||||||||||    
T  10541027 ggttcgatttccaggggaaacaacgcttggccagtgtgcatgcctctacgca 10541078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 555
Target Start/End: Original strand, 16645147 - 16645226
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  ||||| |||||||||||| ||| ||| ||||||||||  ||||| |||||||||  ||||| |||||    
T  16645147 aacaacgcttggccagtgtgcatgcctctacacatgagtctgattagtcgcccacctgtggtgggtcggaaaccggtgcg 16645226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 555
Target Start/End: Original strand, 17080072 - 17080151
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  |||||||||||||||||||||| ||   |||||||||  |||||||| ||| || |||||| |||||    
T  17080072 aacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcacacctttgatggatcgaaaaccggtgcg 17080151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 24166461 - 24166512
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    ||||||||||||  ||||||||||| |||  |||||||||||||||||||||    
T  24166461 ggttcgattcccaagggaaacaacgtttggccagtgcgcatgcctctacgca 24166512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 29588747 - 29588798
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| |||||||||| |||||   ||||||||||||||||||||    
T  29588747 ggttcgattcccaggggaaacaaagcttggctagtgcgcatgcctctacgca 29588798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 510
Target Start/End: Original strand, 20421782 - 20421836
Alignment:
Q  456 ctggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcat 510  Q
    ||||||||||| || |||| |||||| ||||  ||||||||||||||||||||||    
T  20421782 ctggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcat 20421836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 489 - 555
Target Start/End: Original strand, 21429343 - 21429409
Alignment:
Q  489 cagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||||||||||||  |||  || ||||||| |||||||||||||||  ||||| |||||    
T  21429343 cagtgcgcatgcctctacgcacgagtcagactagtcgtccacctttggtgggtcggaaaccggtgcg 21429409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 476 - 542
Target Start/End: Complemental strand, 49260747 - 49260681
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||  |||||||||||||||||||||  ||   |||||||||  |||||||||||||||    
T  49260747 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgaccacctttggtgggtc 49260681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 4738629 - 4738726
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || || | ||||||||||   ||||||||||| |||||||||| ||    ||||||||| |||||||||||||||  ||||| |||||    
T  4738629 ggttcgatttccaggaggaacaacgctttgccagtgcgcatgtctctacgcatgagctgaattagtcgtccacctttggtgggtcggaaaccggtgcg 4738726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 531
Target Start/End: Complemental strand, 8064898 - 8064825
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacc 531  Q
    ||||||||||||  ||| || ||| ||||| |||||||||||||||||||||| ||   |||||||||| ||||    
T  8064898 ggttcgattcccaaggggaataacacttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccacc 8064825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 541
Target Start/End: Original strand, 38168286 - 38168350
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggt 541  Q
    |||||||||||  |||||| ||||||||||||||| ||   |||||||||||||||||| ||||||    
T  38168286 aacaacgcttggccagtgc-catgcctctacgcatgagccggattagtcgttcacctttagtgggt 38168350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 5e-18; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 458 - 553
Target Start/End: Complemental strand, 36619354 - 36619259
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtg 553  Q
    |||||||||||| |||| |||||| ||||  ||||| |||||||||||||||| ||   |||||||||| |||| |||||||||||||||||||||    
T  36619354 ggttcgattcccagggggaacaacacttgtccagtgtgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcaaaaaccagtg 36619259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 38578967 - 38578870
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||||||||  |||||||||||||||||||||| ||   |||||||||  |||||||||||||||  ||||| |||||    
T  38578967 ggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcg 38578870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 39474949 - 39475046
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||   ||| ||||||||||| ||||||||||| ||||||||||| ||   |||||||||| ||||||| ||||||| ||||||||||||    
T  39474949 ggttcgattcctatggggaacaacgcttggtcagtgcgcatacctctacgcatgagccggattagtcgtccacctttagtgggtcgaaaaccagtgcg 39475046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 43862072 - 43861975
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| ||||||| |||  |||||||||||||||||||||| ||   |||||||| |||||||||||||| || |||||| |||||    
T  43862072 ggttcgattcccagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcattcacctttggtggatcgaaaaccggtgcg 43861975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 476 - 552
Target Start/End: Complemental strand, 45697272 - 45697196
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagt 552  Q
    |||||| |||||||||||||||||||||||||||| |||  | |||||||| |||||||||||||||  ||||||||    
T  45697272 aacaacacttgatcagtgcgcatgcctctacgcatgagttgggttagtcgtccacctttggtgggtcggaaaccagt 45697196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 539
Target Start/End: Complemental strand, 26423387 - 26423306
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    |||||||||||| ||||||||||||||||  |||||| | ||||||||||||  ||   |||||||||||||||||||||||    
T  26423387 ggttcgattcccaggggaaacaacgcttggccagtgcacctgcctctacgcacgagccagattagtcgttcacctttggtgg 26423306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 13095867 - 13095951
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||| |||||| |||| |||||| ||||  |||||||||||||||||||||| ||   ||||||||| ||||||||||||||||    
T  13095867 ggttctattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtc 13095951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 549
Target Start/End: Original strand, 22973976 - 22974067
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||| | |||| |||||||||||  ||||| |||||| ||||||||| ||   |||||||||| |||||||||||||||| |||||    
T  22973976 ggttcgattctcagggggaacaacgcttggccagtgtgcatgcgtctacgcatgagccagattagtcgtccacctttggtgggtcagaaacc 22974067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 549
Target Start/End: Original strand, 43925521 - 43925612
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||||| |||| |||||| |||| ||||||||||||||||||||||| ||   ||||||| ||| ||||||| ||| ||| |||||    
T  43925521 ggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagttgtttacctttgatggatcagaaacc 43925612  T

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Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 542
Target Start/End: Original strand, 47341886 - 47341969
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||||||| |||| |||||| ||||  |||||||||||||||||||||  || | |||| |||||||||| ||||||||||    
T  47341886 gttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagcaggattggtcgttcaccattggtgggtc 47341969  T

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Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 10047976 - 10047879
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||| ||||  ||||||||| |||||||||||| || |  ||||||||| |||| ||||||||||  ||||| |||||    
T  10047976 ggttcgattcccagggggaacaacacttggccagtgcgcaggcctctacgcatgagcagaattagtcgtccaccattggtgggtcggaaaccggtgcg 10047879  T

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Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 539
Target Start/End: Complemental strand, 10317845 - 10317765
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    |||||||||||| |||| || ||| |||| |||||||| ||||||||| ||||||| | ||||||||| |||||||||||||    
T  10317845 ggttcgattcccagggggaataacacttggtcagtgcgtatgcctctatgcataagca-gattagtcgctcacctttggtgg 10317765  T

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Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 18785678 - 18785775
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  |||| |||||| ||||  |||||||||||||||||||||| |    |||||||||||||||| |||||||||  ||||| |||||    
T  18785678 ggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgaactggattagtcgttcacctctggtgggtcggaaaccggtgcg 18785775  T

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Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 27028288 - 27028385
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || |||| |||||| ||||  |||||||||||||||||| ||| ||   ||||||||| ||||||||||||||||  ||||| |||||    
T  27028288 ggttcgatttccagggggaacaacacttggccagtgcgcatgcctctacacatgagctggattagtcgctcacctttggtgggtcggaaaccggtgcg 27028385  T

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Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 48804692 - 48804789
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||||  ||| |||||| ||||  |||||||||||||||||||||| ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  48804692 ggttcgattcccaaggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcg 48804789  T

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Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 17748482 - 17748398
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||| |||| |||||||||||  ||||||||||||||||||| |  ||   |||||||||| |||||||| ||||||    
T  17748482 ggttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacgtacgagccggattagtcgtccacctttgttgggtc 17748398  T

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Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 463 - 535
Target Start/End: Complemental strand, 45960098 - 45960026
Alignment:
Q  463 gattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||  ||| |||||| |||| ||||||||||||||||||||||||||   ||||||||| |||||||||    
T  45960098 gattcccaagggcaacaacacttggtcagtgcgcatgcctctacgcataagccggattagtcgctcacctttg 45960026  T

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Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 1797469 - 1797520
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| ||||||||||||||||  ||||||||||| |||||||||    
T  1797469 ggttcgattcccaggggaaacaacgcttggccagtgcgcatgtctctacgca 1797520  T

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Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 460 - 555
Target Start/End: Complemental strand, 27875186 - 27875091
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| |||| || ||| ||||  |||||| ||||||||||||||| |||   ||||||||| ||||||| ||||||| |||||| |||||    
T  27875186 ttcgattcccagggggaataacacttggccagtgcacatgcctctacgcatgagtcgcattagtcgtccacctttagtgggtcgaaaaccggtgcg 27875091  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 479 - 542
Target Start/End: Complemental strand, 41268003 - 41267940
Alignment:
Q  479 aacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| |||| |||||||||||||||| |||  |||||||||| |||||||| ||||||    
T  41268003 aacgcttgattagtgtgcatgcctctacgcatgagttagattagtcgtccacctttgatgggtc 41267940  T

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Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 555
Target Start/End: Complemental strand, 48224813 - 48224734
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||||||||||||||||  |||||| || |||   ||||||| |||| |||||||||||| ||||||| ||||    
T  48224813 aacaacgcttgatcagtgcgcatgtatctacgtatgagtcaaattagtccttcatctttggtgggtcgaaaaccaatgcg 48224734  T

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Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 555
Target Start/End: Complemental strand, 48244438 - 48244359
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||| ||||||||||||||  ||||||||||||| ||   ||||||||| ||||||||||||| || |||||| |||||    
T  48244438 aacaatgcttgatcagtgcgtttgcctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgcg 48244359  T

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Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 365149 - 365214
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagt 523  Q
    |||||||||| | || | |||||||||| |||||||||||||||||||||||| ||  ||||||||    
T  365149 ggttcgattcacaggaggaacaacgcttaatcagtgcgcatgcctctacgcatgagcctgattagt 365214  T

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Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 34659235 - 34659332
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| |  ||| |||||||||||| |||||||||||||||||||||  ||   |||||||||  |||| |||||| ||| |||||| |||||    
T  34659235 ggttcgattctcaaggggaacaacgcttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccaccattggtgtgtcgaaaaccggtgcg 34659332  T

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Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 554
Target Start/End: Complemental strand, 5039517 - 5039422
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgc 554  Q
    ||||||||||  || | |||||| |||| ||||||| ||| ||||||||||| ||   ||||||||| ||||||||||||| || |||||| ||||    
T  5039517 gttcgattcctaggaggaacaacacttggtcagtgcacatacctctacgcatgagccggattagtcgctcacctttggtggatcgaaaaccggtgc 5039422  T

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Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 459 - 554
Target Start/End: Original strand, 23658189 - 23658284
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgc 554  Q
    |||||||| || |||| |||||||||||  ||||| |||||||||||| ||  ||   |||||||||| || ||||||||||||| ||||| ||||    
T  23658189 gttcgatttccagggggaacaacgcttggccagtgtgcatgcctctacacacgagccggattagtcgtccatctttggtgggtcagaaacctgtgc 23658284  T

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Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 8734786 - 8734689
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| | ||||| ||||| |||||  ||||||||||||||| |||||  ||   |||||||||  |||||||||||||||  ||||| |||||    
T  8734786 ggttcgatttcttgggggaacaatgcttgggcagtgcgcatgcctcaacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcg 8734689  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 14650326 - 14650423
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || || | ||||| |||||| ||||||  |||||||||||||| ||   | ||||||| |||||||||||||||  |||||| |||||    
T  14650326 ggttcgatttccaggaggaacaatgcttgaccagtgcatatgcctctacgcatgagccgggttagtcgctcacctttggtgggttgaaaaccggtgcg 14650423  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 555
Target Start/End: Original strand, 23060701 - 23060783
Alignment:
Q  471 ggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| ||||||| |||| || || ||||||||  |||||| |||  ||||||||||||||||||||||| | ||||||| |||||    
T  23060701 gggggaacaacgtttgaccaatgtgcatgcct--acgcatgagtcggattagtcgttcacctttggtggataaaaaaccggtgcg 23060783  T

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Target: scaffold0291 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 6864 - 6961
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||||||||||| ||   ||||||||| ||||||||||||||||  ||||| |||||    
T  6864 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgggtcggaaaccggtgcg 6961  T

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Target: scaffold0170 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 460 - 553
Target Start/End: Original strand, 9856 - 9949
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtg 553  Q
    ||||||| || |||| |||||||||||  |||||||||||||||||||||  ||   |||||||||| |||||||||||||||| |||||||||    
T  9856 ttcgatttccagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcagaaaccagtg 9949  T

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Target: chr8 (Bit Score: 46; Significance: 8e-17; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 45521179 - 45521275
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||||| |||| |||||||||||||||||||||||||||| ||   ||||||||| ||||||||| ||||||  ||||| |||||    
T  45521179 ggttcgattcccaggggaa-caacacttgatcagtgcgcatgcctctacgcatgagccggattagtcgctcacctttgatgggtcggaaaccggtgcg 45521275  T

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Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 554
Target Start/End: Original strand, 18374020 - 18374116
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgc 554  Q
    |||||||||| | |||  |||||||||||| |||||||||||||||||||||| ||   |||||||||| || |||||||||||| |||||| ||||    
T  18374020 ggttcgattctcagggagaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattagtcgtccaactttggtgggtcgaaaaccggtgc 18374116  T

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Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 555
Target Start/End: Complemental strand, 4479393 - 4479299
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| |||||| |||||||||  |||||||||||||||||||||| ||   |||||||||| |||||||||||||||  ||||| |||||    
T  4479393 ttcgattcccaggggaa-caacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtgggtcggaaaccggtgcg 4479299  T

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Target: chr8; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 549
Target Start/End: Original strand, 6100482 - 6100573
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||||| || | |||||||||||  ||||||||||||| |||||||| ||   |||||||||||||||||| ||||||| ||||||    
T  6100482 ggttcgattcccaggaggaacaacgcttggccagtgcgcatgccactacgcatgagccggattagtcgttcacctttagtgggtcgaaaacc 6100573  T

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Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 549
Target Start/End: Original strand, 8141112 - 8141203
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    ||||||||| || ||||||||||||||||  |||||||||||||||||||||| ||    ||||||||| ||| |||||||||||| |||||    
T  8141112 ggttcgatttccaggggaaacaacgcttggccagtgcgcatgcctctacgcatgagctgaattagtcgtccacatttggtgggtcagaaacc 8141203  T

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Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 14666171 - 14666074
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| ||||||||||| ||||  ||||||||||||||||||||| |||   |||||||||  |||  |||||||||| |||||| |||||    
T  14666171 ggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcacaagccagattagtcgcccacagttggtgggtcgaaaaccggtgcg 14666074  T

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Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 10927616 - 10927700
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||  || | |||||||||||  |||||||||||||||||||||| ||   |||||||||||||||||| |||||||    
T  10927616 ggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtc 10927700  T

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Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 555
Target Start/End: Original strand, 43032913 - 43033008
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| |||| |||||||||||  |||||||||||||||||| ||  ||   |||||||||  |||||||||||||||| ||||| |||||    
T  43032913 ttcgattcccagggggaacaacgcttggccagtgcgcatgcctctacacacgagccggattagtcgcccacctttggtgggtcagaaaccggtgcg 43033008  T

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Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 14846586 - 14846669
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| | |||||| ||| | ||| ||||||||||||||||||||||| |||  ||| |||||| |||||||||||||||    
T  14846586 ggttcgattctcaggggaa-caatgattggtcagtgcgcatgcctctacgcatgagtcagataagtcgtccacctttggtgggtc 14846669  T

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Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 583840 - 583899
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||||||| |||||||||||||||||||||| |||  |||||||||  ||||||||    
T  583840 aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttg 583899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 555
Target Start/End: Complemental strand, 3418595 - 3418516
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||| ||||  |||||||||||| ||||||||| |||  |||||||||| ||||||| |||||||| ||||| |||||    
T  3418595 aacaacacttggccagtgcgcatgcgtctacgcatgagtcagattagtcgtccacctttagtgggtcagaaaccggtgcg 3418516  T

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Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 548
Target Start/End: Original strand, 2209806 - 2209883
Alignment:
Q  471 ggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaac 548  Q
    |||||||||||  ||| |||||||||||| | ||||||||||||  ||||||||| ||||| ||||| ||||| ||||    
T  2209806 ggggaaacaacatttggtcagtgcgcatgtccctacgcataagttggattagtcgctcaccattggtaggtcagaaac 2209883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 546
Target Start/End: Complemental strand, 33401899 - 33401811
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaa 546  Q
    |||||||||  | |||| |||||| ||||| ||||| |||||||||||||||| |||  |||||||||  ||||||| |||| ||||||    
T  33401899 ggttcgattttcagggggaacaacacttgaccagtgtgcatgcctctacgcatgagtcggattagtcgcccacctttagtggatcaaaa 33401811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 460 - 552
Target Start/End: Complemental strand, 34710665 - 34710573
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagt 552  Q
    |||||||||| ||||||||||| ||||   ||||||||||||| ||| || ||||  || ||||||| || | |||||||||| |||||||||    
T  34710665 ttcgattcccaggggaaacaacacttggctagtgcgcatgcctttacacacaagtcggactagtcgtccatcattggtgggtcgaaaaccagt 34710573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 549
Target Start/End: Complemental strand, 1013077 - 1012986
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||||| |||| |||||||||||  |||| | ||||||||||||||| ||    |||| |||||||||||| |||| || ||||||    
T  1013077 ggttcgattcccagggggaacaacgcttggccagtacacatgcctctacgcatgagccgaattaatcgttcacctttagtggatcgaaaacc 1012986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 17981451 - 17981502
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| |||| |||||| ||||| ||||| |||||||||||||||    
T  17981451 ggttcgattcccagggggaacaactcttgaccagtgtgcatgcctctacgca 17981502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 539
Target Start/End: Complemental strand, 9860095 - 9860014
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    |||||||||||| |||| |||||| ||||  ||||| |||||||||||| ||| ||   |||||||||| |||| |||||||    
T  9860095 ggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacacatgagccagattagtcgtccaccattggtgg 9860014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 15884655 - 15884559
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||||| |||| ||||   ||||||||||||||||||||  ||   |||||||||  |||||||||||||||  ||||| |||||    
T  15884655 ggttcgattcccaggggaa-caacacttggcaagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcg 15884559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 499
Target Start/End: Original strand, 22810090 - 22810130
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatg 499  Q
    ||||||||||||||||||| ||||||||| ||||||||||||    
T  22810090 ggttcgattccctggggaa-caacgcttggtcagtgcgcatg 22810130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 8e-17; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 21898658 - 21898755
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| || | |||||||||||  |||||||||||||||||||||| ||   |||||||||||||||||| |||||||  ||||| |||||    
T  21898658 ggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcg 21898755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 542
Target Start/End: Original strand, 11142614 - 11142697
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||||| | | |||||||||| |||| |||||||||||||||||||||| |||  ||||||| || || ||||||||||||    
T  11142614 gttcgattcgcagtggaaacaacgtttgaccagtgcgcatgcctctacgcatgagtcagattagttgtccaactttggtgggtc 11142697  T

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Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 5253323 - 5253226
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||||||||||| ||   ||||| |||  |||||||||||||||  ||||| |||||    
T  5253323 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattaatcgcccacctttggtgggtcggaaaccggtgcg 5253226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 550
Target Start/End: Original strand, 8888906 - 8888984
Alignment:
Q  472 gggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacca 550  Q
    ||||||||||| |||  |||||||||| ||||||||||| |||  |||||||||| |||||||| ||| || |||||||    
T  8888906 gggaaacaacgtttggccagtgcgcatacctctacgcatgagtcggattagtcgtccacctttgatggatcgaaaacca 8888984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 8612074 - 8611977
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  || | |||||||||||| ||||| |||||| ||||||||| |    |||||||||  |||||||||||||||| ||||| |||||    
T  8612074 ggttcgattccgaggaggaacaacgcttgaccagtgtgcatgcttctacgcatgaaccggattagtcgcccacctttggtgggtcagaaaccggtgcg 8611977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 539
Target Start/End: Complemental strand, 9179836 - 9179755
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    |||||||||||| |||| |||||| ||||| ||||  |||| ||||||||||| ||   |||||||||| ||||||||||||    
T  9179836 ggttcgattcccagggggaacaacacttgaccagtatgcatacctctacgcatgagctggattagtcgtccacctttggtgg 9179755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 12635824 - 12635921
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| ||||||| ||||||||||||||||   |||||||||||||||||||| |||   |||||||||  |||  ||||||||||  ||||| |||||    
T  12635824 ggtttgattcccaggggaaacaacgcttggctagtgcgcatgcctctacgcacaagccggattagtcgcccactattggtgggtcggaaaccggtgcg 12635921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 29444865 - 29444768
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| |  |||| |||||||||||  |||||||||||||||||||||| ||   ||||||| || || ||||||||||||  |||| ||||||    
T  29444865 ggttcgatttctagggggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagttgtccatctttggtgggtcggaaactagtgcg 29444768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 5029827 - 5029911
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| | |||  ||||||| ||| ||||||||||||||||||||||| |||  |||||||||  || ||||| ||||||    
T  5029827 ggttcgattctcagggagaacaacgtttggtcagtgcgcatgcctctacgcatgagttggattagtcgcccatctttgatgggtc 5029911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 9147311 - 9147379
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgt 526  Q
    |||||||||||| |||| ||| || ||||| |||||| ||||||||||||||||||   ||||||||||    
T  9147311 ggttcgattcccagggggaacgacacttgaccagtgcacatgcctctacgcataagccggattagtcgt 9147379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 476 - 548
Target Start/End: Complemental strand, 10311551 - 10311479
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaac 548  Q
    |||||||||||  ||||||||||| |||||||||  |||  ||||||||| ||||| |||||||||| |||||    
T  10311551 aacaacgcttggccagtgcgcatgtctctacgcacgagttagattagtcgctcaccattggtgggtcgaaaac 10311479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 510
Target Start/End: Complemental strand, 14107458 - 14107406
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcat 510  Q
    |||||||||||| || | |||||||||||| |||||| |||||||||||||||    
T  14107458 ggttcgattcccaggaggaacaacgcttgaccagtgcacatgcctctacgcat 14107406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 555
Target Start/End: Original strand, 3601096 - 3601191
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||| | |||| |||||||||||  |||||||||||||| ||| ||  ||   |||||||||| |||||||||||||||  ||||| |||||    
T  3601096 ttcgattctcagggggaacaacgcttggccagtgcgcatgcctatacacacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcg 3601191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 555
Target Start/End: Complemental strand, 9633707 - 9633628
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  |||||||||||||||||||||  ||   |||||||||  |||||||||||||||  ||||| |||||    
T  9633707 aacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcg 9633628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 476 - 554
Target Start/End: Complemental strand, 2271385 - 2271307
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgc 554  Q
    ||||||||||   ||||||||||| |||||||||  ||   |||||||||| |||||||| ||||||| ||||||||||    
T  2271385 aacaacgcttagccagtgcgcatgtctctacgcacgagccggattagtcgtccacctttgatgggtcagaaaccagtgc 2271307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 457 - 555
Target Start/End: Original strand, 8938720 - 8938818
Alignment:
Q  457 tggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||||| || | |||||| ||||| ||||||||| || ||||||||| ||    ||||||||| |||||||| ||||||  ||||| |||||    
T  8938720 tggttcgattcccaggaggaacaacacttgaccagtgcgcaagcatctacgcatgagccgaattagtcgtccacctttgatgggtcggaaaccggtgcg 8938818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 6606197 - 6606100
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| | |||| |||||| ||||  |||||  ||||||||||||||| ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  6606197 ggttcgattctcagggggaacaacacttggccagtgtacatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcg 6606100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 13036104 - 13036007
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||  | |||| |||||| ||||  |||||||||||||||||||||| ||   |||||||||| |||  ||||||||||  ||||| |||||    
T  13036104 ggttcgattttcagggggaacaacacttggccagtgcgcatgcctctacgcatgagccagattagtcgtccactattggtgggtcggaaaccggtgcg 13036007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 19089508 - 19089605
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| ||||||| |||| |||||| ||||  ||||| |||||||||||||||  ||   ||||||||||  ||||||||||||||  ||||| |||||    
T  19089508 ggtttgattcccagggggaacaacacttggccagtgagcatgcctctacgcacgagccggattagtcgtctacctttggtgggtcggaaaccggtgcg 19089605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 34954719 - 34954622
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| | |||| ||||||| |||  |||||| ||| ||||||||||| ||   |||||||||| |||||||| ||||||  |||||| ||||    
T  34954719 ggttcgattctcagggggaacaacgtttggccagtgcacatacctctacgcatgagccagattagtcgtccacctttgatgggtcggaaaccaatgcg 34954622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 8e-17; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 41663957 - 41663860
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||| |||| ||||||||||||||||||||||| ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  41663957 ggttcgattcccagggggaacaacacttggtcagtgcgcatgcctctacgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcg 41663860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 49078121 - 49078218
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| ||||||||||| ||||  |||||||||||||||||||||| ||   ||||||||||||||| ||||| ||||  ||||| |||||    
T  49078121 ggttcgattcccaggggaaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgttcaccattggtaggtcggaaaccggtgcg 49078218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 5855529 - 5855613
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||| || | |||||||||||  |||||||||||||||||||||| ||   |||||||||||||||||| |||||||    
T  5855529 ggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgaggcggattagtcgttcacctttagtgggtc 5855613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 15465972 - 15466056
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||||| || |||| ||||||||||| ||||||| ||||||||||||||  ||| ||||| |||| ||||||||||||||||    
T  15465972 ggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgcacgagtctgattggtcgctcacctttggtgggtc 15466056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 26325819 - 26325916
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| | || |||||| |||| ||||||||||||||||||||||| ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  26325819 ggttcgattcccagcgggaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcg 26325916  T

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Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 45361983 - 45361886
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| | || | |||||||||||  ||||||||||||| |||||||||||   |||||||||||||||||| |||||||  ||||| |||||    
T  45361983 ggttcgattctcaggaggaacaacgcttggccagtgcgcatgccactacgcataagccggattagtcgttcacctttagtgggtcggaaaccggtgcg 45361886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 5504038 - 5504122
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| | ||| |||||||||||||| ||||| ||||||||||||||| ||   |||||||||| |||||||| ||||||    
T  5504038 ggttcgattctcagggaaaacaacgcttgattagtgcacatgcctctacgcatgagccggattagtcgtccacctttgatgggtc 5504122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 17642105 - 17642021
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||||||||||  ||   |||||||||| |||||||||||||||    
T  17642105 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtc 17642021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 510
Target Start/End: Complemental strand, 28324681 - 28324629
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcat 510  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||||||    
T  28324681 ggttcgattccccggggaaacaacacttggtcagtgcgcatgcctctacgcat 28324629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 34719783 - 34719867
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||||||||   || || ||||||||| |||||||||||||||||||||  |||  ||||||||| ||||||||||||||||    
T  34719783 ggttcgattcccactgggaataacgcttgaccagtgcgcatgcctctacgcacgagtcagattagtcgctcacctttggtgggtc 34719867  T

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Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 471 - 555
Target Start/End: Original strand, 16956486 - 16956570
Alignment:
Q  471 ggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| ||||||| |||| |||||||||||||||||||||  ||   ||||||||  ||||||||||||||||  |||||||||||    
T  16956486 ggggtaacaacgtttgaccagtgcgcatgcctctacgcacgagccggattagtcactcacctttggtgggtcggaaaccagtgcg 16956570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 9659279 - 9659197
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggt 541  Q
    |||||||||||| |||||| ||||| ||||  ||||||||||||| ||||||| ||   |||||||||| ||||||||||||||    
T  9659279 ggttcgattcccaggggaa-caacgtttgactagtgcgcatgcctttacgcatgagccggattagtcgtccacctttggtgggt 9659197  T

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Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 549
Target Start/End: Original strand, 10336523 - 10336614
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||  | |||| |||||||||||| |||||||||||||||||||||| ||   ||||| |||| |||||||| ||| || ||||||    
T  10336523 ggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacgcatgagccggattaatcgtccacctttgatggatcgaaaacc 10336614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 509
Target Start/End: Complemental strand, 50503462 - 50503411
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| |||| |||||| ||||| |||||||||||||||||||||    
T  50503462 ggttcgattcccagggggaacaacacttgaccagtgcgcatgcctctacgca 50503411  T

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Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 8763998 - 8764095
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||| ||||| |||| |||||| ||||  |||||||||||||||||||||  ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  8763998 ggttcgtttcccagggggaacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgtccaccgttggtgggtcggaaaccggtgcg 8764095  T

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Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 11397989 - 11397906
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||  |||||| ||||| |||  || |||| |||||||||||||| |||  |||||||||| |||||||||||||||    
T  11397989 ggttcgattccgaggggaa-caacgtttggccaatgcgtatgcctctacgcatgagtcggattagtcgtccacctttggtgggtc 11397906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 554
Target Start/End: Complemental strand, 30927828 - 30927732
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgc 554  Q
    ||||||||| || | || |||||||||||  || || |||||||||||||||| ||   |||||||||| ||| |||||||||||| ||||| ||||    
T  30927828 ggttcgatttccagagggaacaacgcttggccaatgtgcatgcctctacgcatgagccggattagtcgtccacttttggtgggtcagaaaccggtgc 30927732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 510
Target Start/End: Complemental strand, 48798171 - 48798119
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcat 510  Q
    ||||||||| || |||| ||||||||||||  |||||||||||||||||||||    
T  48798171 ggttcgatttccagggggaacaacgcttgactagtgcgcatgcctctacgcat 48798119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 513
Target Start/End: Original strand, 16263552 - 16263607
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataag 513  Q
    ||||||||| || || | |||||||||||  |||||||||||||||||||||||||    
T  16263552 ggttcgatttccaggaggaacaacgcttggccagtgcgcatgcctctacgcataag 16263607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 549
Target Start/End: Complemental strand, 17358572 - 17358481
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||| | |||  |||||||||||| || ||||||||||| ||||||| ||   ||||||| ||||| |||| |||||||| |||||    
T  17358572 ggttcgattctcagggagaacaacgcttgaccaatgcgcatgcctttacgcatgagcccgattagttgttcatctttagtgggtcagaaacc 17358481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 18915874 - 18915957
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggt 541  Q
    |||||||||||| |||| |||||| ||||  ||||| |||||||||||||||  ||   ||||||||| ||||| |||||||||    
T  18915874 ggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgctcaccattggtgggt 18915957  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 549
Target Start/End: Complemental strand, 21849305 - 21849215
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||||| |||||| |||||||||   ||||||||||||||||||||  ||   ||||||||| ||||  |||||||||| ||||||    
T  21849305 ggttcgattcccaggggaa-caacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgctcactattggtgggtcgaaaacc 21849215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 549
Target Start/End: Complemental strand, 32151023 - 32150932
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    ||||||||| || |||| ||||||  ||| ||||||||||||||| ||||||| ||    |||||||| ||||||||| |||||| ||||||    
T  32151023 ggttcgatttccagggggaacaacatttggtcagtgcgcatgcctttacgcatgagccgaattagtcgctcacctttgatgggtcgaaaacc 32150932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Complemental strand, 43959922 - 43959871
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    ||||| |||||| |||| |||||||||||  |||||||||||||||||||||    
T  43959922 ggttcaattcccagggggaacaacgcttggccagtgcgcatgcctctacgca 43959871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 537
Target Start/End: Original strand, 10422813 - 10422874
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggt 537  Q
    |||||| ||||  |||||||||||||||||||||| ||   |||||||||| ||||||||||    
T  10422813 aacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggt 10422874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 507
Target Start/End: Complemental strand, 18649453 - 18649404
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacg 507  Q
    |||||||||  | |||| |||||||||||| |||||||||||||||||||    
T  18649453 ggttcgattttcagggggaacaacgcttgaccagtgcgcatgcctctacg 18649404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 26660145 - 26660241
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| ||  ||| ||||||  ||||||||| ||||||||||||||||| ||   |||||||||  |||||||||||||||  ||||| |||||    
T  26660145 ggttcgatttccacggggaacaacatttgatcagtacgcatgcctctacgcatgagccggattagtcg-ccacctttggtgggtcggaaaccggtgcg 26660241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 509
Target Start/End: Complemental strand, 33004114 - 33004065
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    ||||||| || |||||||||| |||||  |||||||||||||||||||||    
T  33004114 ttcgatttccaggggaaacaatgcttggccagtgcgcatgcctctacgca 33004065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 478 - 535
Target Start/End: Complemental strand, 33498920 - 33498863
Alignment:
Q  478 caacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||||  |||||||||||||||||||||| ||   |||||||||| ||||||||    
T  33498920 caacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttg 33498863  T

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Target: scaffold0016 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 8801 - 8717
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||| |||| |||||||||||  |||||||| ||||||||||||| ||   |||||||||| |||||||||||||||    
T  8801 ggttcgattcccagggggaacaacgcttggccagtgcgcttgcctctacgcatgagctggattagtcgtccacctttggtgggtc 8717  T

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Target: chr3 (Bit Score: 45; Significance: 3e-16; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 50405704 - 50405620
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||  ||||||||||||||||| |||||||||||||||||||||  |||  |||||||||  |||| ||||||||||    
T  50405704 ggttcgattccgaggggaaacaacgcttgaccagtgcgcatgcctctacgcacgagtcggattagtcgcccaccattggtgggtc 50405620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 472 - 555
Target Start/End: Complemental strand, 35998658 - 35998575
Alignment:
Q  472 gggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||||||||||||||| ||||||||||||||  |||  ||||| |||| ||||||| |||||||| ||||| |||||    
T  35998658 gggaaacaacgcttgatcagtgcacatgcctctacgcacgagttggattaatcgtccacctttagtgggtcagaaaccggtgcg 35998575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 472 - 542
Target Start/End: Complemental strand, 24506735 - 24506665
Alignment:
Q  472 gggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||||||| |||||| ||||||||||||||| |||  ||||||||| ||||| ||||||||||    
T  24506735 gggaaacaacgcttgaccagtgcacatgcctctacgcatgagtcagattagtcgctcaccattggtgggtc 24506665  T

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Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 30045827 - 30045924
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  |||| |||||||||||  ||||||||||| |||||||||  ||| ||||||||||| |||||||| ||||||  |||| ||||||    
T  30045827 ggttcgattcctagggggaacaacgcttggccagtgcgcatgtctctacgcacgagtctgattagtcgtccacctttgatgggtcgtaaactagtgcg 30045924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 472 - 549
Target Start/End: Complemental strand, 43330819 - 43330742
Alignment:
Q  472 gggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||| ||||| |||||||||||||||||||||  ||   |||||||||  ||||||||||||||||||||||    
T  43330819 gggaaacaacacttgaccagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcaaaaacc 43330742  T

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Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 47219150 - 47219247
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||||  |||||||||||||||   ||||||||||||||||||||| ||   |||||||||| |||||||| ||||||  ||||| |||||    
T  47219150 ggttcgattcccaagggaaacaacgcttggctagtgcgcatgcctctacgcatgagccggattagtcgtccacctttgatgggtcggaaaccggtgcg 47219247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 54261232 - 54261329
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  || | |||||||||||  |||||||||||||||||||||| ||   |||||||||||||||||| |||||||  ||||| |||||    
T  54261232 ggttcgattcctaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcg 54261329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 549
Target Start/End: Original strand, 26043818 - 26043909
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||||| |||  |||||| ||||  |||||||||||||||||||||| ||   ||||||||| |||||||||||| |||| |||||    
T  26043818 ggttcgattcccagggagaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgctcacctttggtgagtcagaaacc 26043909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 7328850 - 7328946
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||| ||||||| ||   |||||||||  ||||||||||||||| |||||| |||||    
T  7328850 ggttcgattcccagggggaacaacacttggccagtgcgcatgcct-tacgcatgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcg 7328946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 478 - 555
Target Start/End: Original strand, 23511593 - 23511670
Alignment:
Q  478 caacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||| |||| |||||||||||||||||||||| |||  ||||| |||| |||||||| |||||| |||||| |||||    
T  23511593 caacgtttgaccagtgcgcatgcctctacgcatgagtcggattaatcgtccacctttgatgggtcgaaaaccggtgcg 23511670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 28572312 - 28572215
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| ||||||||||||||||  ||||  |||||||||||||||  ||   |||||||||  |||||||||||||||  ||||| |||||    
T  28572312 ggttcgattcccaggggaaacaacgcttggccagtatgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaaccggtgcg 28572215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 45877460 - 45877557
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || ||||||||||| ||||  |||||| ||||||||||||||| ||   ||||||||||||||| ||| ||||||  ||||| |||||    
T  45877460 ggttcgatttccaggggaaacaacacttggccagtgcacatgcctctacgcatgagccggattagtcgttcaccattgatgggtcggaaaccggtgcg 45877557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 51060382 - 51060285
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| | |||| |||||| |||| ||||||||||||||||||||||| |    |||||||||| |||| ||||||||||  ||||| |||||    
T  51060382 ggttcgattctcagggggaacaacacttggtcagtgcgcatgcctctacgcatgaactggattagtcgtccaccattggtgggtcggaaaccggtgcg 51060285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 29127925 - 29128009
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||||| || |||  |||||| |||| ||||||||||||||||||||||| ||   |||||||||  |||||||||||||||    
T  29127925 ggttcgatttccagggagaacaacacttggtcagtgcgcatgcctctacgcatgagccggattagtcgcccacctttggtgggtc 29128009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 35315962 - 35316046
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||||||||||| ||   |||||||||  ||| |||||||||||    
T  35315962 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagctggattagtcgcccacttttggtgggtc 35316046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 555
Target Start/End: Complemental strand, 3136777 - 3136698
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||| ||||  |||||||||||||||||||||| |||  |||||||||| |||||||||| ||||  ||||| |||||    
T  3136777 aacaacacttgggcagtgcgcatgcctctacgcatgagtcggattagtcgtccacctttggttggtcggaaaccggtgcg 3136698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 4638160 - 4638211
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| || |||||||||||||| |||||||||| ||||||||||    
T  4638160 ggttcgattcccaggagaaacaacgcttgaccagtgcgcatacctctacgca 4638211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 25294966 - 25295049
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggt 541  Q
    |||| ||||| ||||||||||||| ||||  ||||||||||||||||| |||| ||   |||||||||| |||| |||||||||    
T  25294966 ggtttgattctctggggaaacaacacttggccagtgcgcatgcctctatgcatgagccggattagtcgtccaccattggtgggt 25295049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 471 - 542
Target Start/End: Complemental strand, 34374530 - 34374459
Alignment:
Q  471 ggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||||||| |||| |||||||||||||||| ||||||||||  |||||||||  |  ||||||||||||    
T  34374530 ggggaaacaacacttggtcagtgcgcatgcctcaacgcataagtcggattagtcgcccttctttggtgggtc 34374459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 535
Target Start/End: Complemental strand, 45450530 - 45450471
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    ||||| |||||| |||||||||||||||||||||||||   |||||||||| ||||||||    
T  45450530 aacaatgcttgaccagtgcgcatgcctctacgcataagctagattagtcgtccacctttg 45450471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 549
Target Start/End: Original strand, 49198357 - 49198448
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||||  |||| |||||| ||||  |||||||||||||||||||||| ||   |||||||||| |||| ||||||| ||| |||||    
T  49198357 ggttcgattcctagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtggatcagaaacc 49198448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 459 - 509
Target Start/End: Complemental strand, 15795593 - 15795544
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||||||||    
T  15795593 gttcgattcccaggggaa-caacgcttggtcagtgcgcatgcctctacgca 15795544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 458 - 504
Target Start/End: Complemental strand, 51683055 - 51683009
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctct 504  Q
    |||||||||||| |||| |||||||||||| ||||||||||||||||    
T  51683055 ggttcgattcccagggggaacaacgcttgaccagtgcgcatgcctct 51683009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 490 - 535
Target Start/End: Complemental strand, 15285802 - 15285757
Alignment:
Q  490 agtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    ||||||||||||||||| |||||||  |||||||||||||||||||    
T  15285802 agtgcgcatgcctctacacataagttggattagtcgttcacctttg 15285757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 541
Target Start/End: Original strand, 29135921 - 29136002
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggt 541  Q
    |||||||||| |||| |||||| ||||  |||||||||||||||||||||| ||   |||||||| | |||| |||||||||    
T  29135921 ttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcttccaccattggtgggt 29136002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 33251668 - 33251765
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| | || ||||||| |||  ||||| |||||||||||||||| ||   |||||||||| ||| |||| |||||| ||||| ||||||    
T  33251668 ggttcgattcccggtgggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgtccacatttgatgggtcgaaaacgagtgcg 33251765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 40944890 - 40944973
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtca 543  Q
    ||||||||||| |||| |||||| ||| | ||||  |||||||||||||||| ||   ||||||||| |||||||||||||||||    
T  40944890 gttcgattcccagggggaacaacacttaaccagtatgcatgcctctacgcatgag-cggattagtcgctcacctttggtgggtca 40944973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 476 - 555
Target Start/End: Complemental strand, 3507616 - 3507537
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||| ||||  |||||||||||||||||||||  ||   ||||||||| ||||||||||||||||  ||||| |||||    
T  3507616 aacaacacttggccagtgcgcatgcctctacgcacgagccggattagtcgctcacctttggtgggtcggaaaccggtgcg 3507537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 31072884 - 31072935
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    ||||||||| || |||| ||||||||||| ||||||| ||||||||||||||    
T  31072884 ggttcgatttccagggggaacaacgcttggtcagtgcacatgcctctacgca 31072935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 491 - 542
Target Start/End: Complemental strand, 45402419 - 45402368
Alignment:
Q  491 gtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||||||||||||| ||   |||||||||||||||||| |||||||    
T  45402419 gtgcgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtc 45402368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 488 - 554
Target Start/End: Complemental strand, 40660398 - 40660332
Alignment:
Q  488 tcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgc 554  Q
    ||||||||||||||||||||||| |    ||||| || ||||||||||||||||| |||||| ||||    
T  40660398 tcagtgcgcatgcctctacgcatgaaccggattaatcattcacctttggtgggtcgaaaaccggtgc 40660332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 489 - 555
Target Start/End: Complemental strand, 49021273 - 49021207
Alignment:
Q  489 cagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||||||||||||| ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  49021273 cagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcggaaaccggtgcg 49021207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 459 - 509
Target Start/End: Complemental strand, 52364900 - 52364850
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    ||||||||||| |  | |||||||||||| |||||||||||||||||||||    
T  52364900 gttcgattcccagaaggaacaacgcttgaccagtgcgcatgcctctacgca 52364850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 474 - 555
Target Start/End: Complemental strand, 2029352 - 2029271
Alignment:
Q  474 gaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||||| | ||| ||||||||||||||||| ||   |||||||||  |||| ||| ||||||  |||||||||||    
T  2029352 gaaacaacgcttggttagtacgcatgcctctacgcatgagctggattagtcgcccaccattgatgggtcgcaaaccagtgcg 2029271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 537
Target Start/End: Original strand, 3755578 - 3755655
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggt 537  Q
    |||||||||| || | ||||||| |||| ||||||||||| |||||||||| ||   ||||||||||  |||||||||    
T  3755578 ttcgattcccaggaggaacaacgtttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctacctttggt 3755655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 13893932 - 13894029
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| |||| || |||| ||||||||||| ||| ||||||||||||||| ||  ||   |||||||||  |||||||||||| || |||||| |||||    
T  13893932 ggttggatttccagggggaacaacgcttggtcaatgcgcatgcctctacacacgagccggattagtcgcccacctttggtggatcgaaaaccggtgcg 13894029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 555
Target Start/End: Complemental strand, 29762252 - 29762159
Alignment:
Q  462 cgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||| | |||| |||||| ||||  ||||||||||||||||| |||| ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  29762252 cgattctcaggggcaacaacacttggccagtgcgcatgcctctatgcatgagctggattagtcgtccaccattggtgggtcggaaaccggtgcg 29762159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 30767348 - 30767251
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || |||| |||||| ||||  ||||| |||||||||||||||  ||   |||||||||  |||||||||||||||  |||| ||||||    
T  30767348 ggttcgatttccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcggaaactagtgcg 30767251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 521
Target Start/End: Complemental strand, 41223125 - 41223076
Alignment:
Q  472 gggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgatta 521  Q
    ||||||||||| |||  || ||||||||||||||||||||||| ||||||    
T  41223125 gggaaacaacgtttggccaatgcgcatgcctctacgcataagtctgatta 41223076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 531
Target Start/End: Complemental strand, 42412875 - 42412802
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacc 531  Q
    |||||||||||| |||| |||||||||||   ||||| ||||||||||||||| ||   ||||||||| |||||    
T  42412875 ggttcgattcccggggggaacaacgcttggcaagtgcccatgcctctacgcatgagccggattagtcgctcacc 42412802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 579 - 676
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| | |||| |||||| ||||||||||| ||||||||||||| || ||   ||||||||| ||||||||||||||||  ||||| |||||    
T  579 ggttcgattcgcagggggaacaacacttgatcagtgtgcatgcctctacgtatgagccagattagtcgctcacctttggtgggtcggaaaccggtgcg 676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 540
Target Start/End: Original strand, 319444 - 319513
Alignment:
Q  471 ggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtggg 540  Q
    |||| |||||||||||  |||||||||| |||||| |||| ||   |||||||||| |||||||||||||    
T  319444 gggggaacaacgcttggccagtgcgcatccctctatgcatgagctggattagtcgtccacctttggtggg 319513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 535
Target Start/End: Complemental strand, 15234161 - 15234084
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||||| | |||| |||||| ||||| ||||||||||||||||||||| ||||  ||||||||||||| |||||    
T  15234161 ggttcgattctcagggggaacaacacttgaccagtgcgcatgcctctacgcacaagttagattagtcgttcatctttg 15234084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 25540504 - 25540407
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  |||| |||||||||||  |||||||||||||||||||||  ||   |||||||||| |||||||||||||||  ||||| |||||    
T  25540504 ggttcgattcctagggggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgtccacctttggtgggtcggaaaccggtgcg 25540407  T

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Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 41220641 - 41220738
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| || | |||||||||||  |||||||||||||||||||||| ||    ||||||||||||||||| |||||||  ||||| |||||    
T  41220641 ggttcgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcatgagccgaattagtcgttcacctttagtgggtcggaaaccggtgcg 41220738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 21286450 - 21286501
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  21286450 ggttcgattcccaggcgaaacaacgcttgaccagtgcgcatgcctctacgca 21286501  T

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Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 459 - 542
Target Start/End: Original strand, 22593142 - 22593224
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    ||||||||||| |||| ||||||| |||  |||||||||||||||||||||| ||   |||||||||| |||||||||||||||    
T  22593142 gttcgattcccagggggaacaacg-ttggccagtgcgcatgcctctacgcatgagccggattagtcgtccacctttggtgggtc 22593224  T

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Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 460 - 549
Target Start/End: Complemental strand, 6358249 - 6358160
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    ||||||| || |||| |||||| ||||  |||||||||||||||||||||| ||   |||||||||| |||| |||||||||| ||||||    
T  6358249 ttcgatttccagggggaacaacacttggccagtgcgcatgcctctacgcatgagccggattagtcgtccaccattggtgggtcgaaaacc 6358160  T

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Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 12455316 - 12455413
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || |||||||||||||||   |||||||||||||||||||||  ||   ||||||||| ||||| ||||||||||  ||||| |||||    
T  12455316 ggttcgatttccaggggaaacaacgcttagccagtgcgcatgcctctacgcacgagccggattagtcgctcaccattggtgggtcggaaaccggtgcg 12455413  T

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Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 534
Target Start/End: Complemental strand, 2528441 - 2528365
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcaccttt 534  Q
    |||||||||||| |||| ||||||||||| |||||| |||||||||||| ||||||   ||||||||| ||| ||||    
T  2528441 ggttcgattcccagggggaacaacgcttggtcagtgtgcatgcctctacacataagccggattagtcgctcatcttt 2528365  T

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Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 540
Target Start/End: Complemental strand, 3643969 - 3643905
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtggg 540  Q
    |||||||||||  |||||||||||||||||||||| ||   |||||||||| |||||||||||||    
T  3643969 aacaacgcttggccagtgcgcatgcctctacgcatgagctggattagtcgtccacctttggtggg 3643905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 10026716 - 10026632
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| | |||| ||||||| |||  |||||||||||||||||||||| ||   |||||||||  |||||||||||||||    
T  10026716 ggttcgattctcagggggaacaacgtttggccagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtc 10026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Complemental strand, 10046576 - 10046493
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| |  ||||||||||| |||| |||||||||||||||||||||| ||   |||||||||  |||||||||||||||    
T  10046576 ggttcgattctcaagggaaacaacgtttga-cagtgcgcatgcctctacgcatgagccggattagtcgaccacctttggtgggtc 10046493  T

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Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 542
Target Start/End: Original strand, 10669598 - 10669682
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||| ||||||| |||  |||||||||||  ||||||||||| |||||||||  |||  ||||| ||||||||||||||||||||    
T  10669598 ggtttgattcccagggagaacaacgcttggccagtgcgcatgtctctacgcacgagtcggattaatcgttcacctttggtgggtc 10669682  T

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Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 459 - 555
Target Start/End: Original strand, 16325602 - 16325698
Alignment:
Q  459 gttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||| |||| |||||| ||||  ||||| |||||||||||||||| ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  16325602 gttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcg 16325698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 476 - 548
Target Start/End: Original strand, 38962787 - 38962859
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaac 548  Q
    |||||||||||  |||||||||||||||||||||| |    |||||||||| |||||||||||||||| ||||    
T  38962787 aacaacgcttggccagtgcgcatgcctctacgcatgaaccggattagtcgtccacctttggtgggtcagaaac 38962859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 331507 - 331590
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggt 541  Q
    |||||||||||| |||| |||||| ||||  |||||||||||| ||||||||| ||   |||||||||  ||||||||||||||    
T  331507 ggttcgattcccagggggaacaacacttggccagtgcgcatgcttctacgcatgagccggattagtcgcccacctttggtgggt 331590  T

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Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 549
Target Start/End: Complemental strand, 3811791 - 3811700
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||||| | || |||||| |||| ||| ||||||||||||||||||| ||   ||||| |||  |||||||||||||||| |||||    
T  3811791 ggttcgattcccagagggaacaacacttggtcaatgcgcatgcctctacgcatgagccggattactcgcccacctttggtgggtcagaaacc 3811700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 460 - 555
Target Start/End: Original strand, 12864232 - 12864327
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||| || |||| |||||| |||| ||||||||||||||||| ||||| ||   |||||||||| |||| ||||||||||  ||||| |||||    
T  12864232 ttcgatttccagggggaacaacacttggtcagtgcgcatgcctctgcgcatgagccagattagtcgtccaccattggtgggtcggaaaccggtgcg 12864327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 39201606 - 39201524
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||| | |||| ||||| | |||  ||||| |||||||||||||||| ||   ||||||||||||||||||||||||||    
T  39201606 ttcgattctcagggggaacaatgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttggtgggtc 39201524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 547
Target Start/End: Complemental strand, 3849014 - 3848925
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaa 547  Q
    |||||||||  | |||||||||||| |||  ||| ||||||| |||||||||  |||  ||||||||||||||||||| |||||| ||||    
T  3849014 ggttcgattatcaggggaaacaacgtttggccagggcgcatgtctctacgcacgagtcggattagtcgttcacctttgatgggtcgaaaa 3848925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 7747280 - 7747377
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  || | ||||||| |||  ||||| |||||||||||||||| ||   |||||||||||||||||| |||||||  ||||| |||||    
T  7747280 ggttcgattcctaggaggaacaacgtttggccagtgtgcatgcctctacgcatgagccggattagtcgttcacctttagtgggtcggaaaccggtgcg 7747377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 14169709 - 14169612
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||| | |||| |||||| ||||| ||||||||||| |||||||||| ||   ||||||||||  ||| ||||||||||  ||||| |||||    
T  14169709 ggttcgattctccgggggaacaacacttgaccagtgcgcatgtctctacgcatgagccggattagtcgtctaccattggtgggtcggaaaccggtgcg 14169612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 18902630 - 18902533
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||||  ||| |||||||||||| |||||||| || |||||||||  ||   |||||||||  |||||||||||||||  ||||| |||||    
T  18902630 ggttcgattcccacggggaacaacgcttgaccagtgcgcgtgtctctacgcacgagccagattagtcgcccacctttggtgggtcggaaaccggtgcg 18902533  T

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Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 539
Target Start/End: Original strand, 38005408 - 38005489
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgg 539  Q
    ||||||||||||  ||| |||||||||||  |||||||||||||||||| ||| ||   |||||||||  ||||||||||||    
T  38005408 ggttcgattcccaaggggaacaacgcttggccagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgg 38005489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 39806985 - 39806888
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||||||  | ||||||||| |||  |||||||||||||||||| ||  |||  |||||||| | |||||||||||| ||| ||||| |||||    
T  39806985 ggttcgattcccaagagaaacaacgtttggccagtgcgcatgcctctacacacgagtcggattagtcatccacctttggtggttcataaaccggtgcg 39806888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 41032006 - 41031909
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||| ||||  ||||| |||||||||||||||  ||   ||||||||   |||||||||||||||  |||||||||||    
T  41032006 ggttcgattcccagggggaacaacacttggccagtgtgcatgcctctacgcacgagccggattagtcacccacctttggtgggtcggaaaccagtgcg 41031909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 547
Target Start/End: Complemental strand, 45263767 - 45263678
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaa 547  Q
    |||||||||||| | || |||||||||||  |||||||||||||||||||||  ||   ||||| ||| ||| |||||||||||| ||||    
T  45263767 ggttcgattcccagagggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattaatcgctcatctttggtgggtcgaaaa 45263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 489 - 541
Target Start/End: Complemental strand, 18649095 - 18649043
Alignment:
Q  489 cagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggt 541  Q
    |||||||||||||||||||||| |||  ||||||||| |||| ||||||||||    
T  18649095 cagtgcgcatgcctctacgcatgagtcggattagtcgctcacttttggtgggt 18649043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 554
Target Start/End: Original strand, 24179575 - 24179670
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgc 554  Q
    |||||||||| | |||||| ||||| |||  |||||| ||||||||||||||| ||   |||||||||| || ||||||||||| ||||||| ||||    
T  24179575 ggttcgattctcaggggaa-caacgtttggccagtgcacatgcctctacgcatgagccggattagtcgtccatctttggtgggttaaaaaccggtgc 24179670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 471 - 555
Target Start/End: Complemental strand, 34346374 - 34346290
Alignment:
Q  471 ggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| |||||| ||||  ||||| |||||||||||||||| |||  ||||| ||| ||||||||||||||||  ||||| |||||    
T  34346374 gggggaacaacacttggccagtgtgcatgcctctacgcatgagtcagattaatcgctcacctttggtgggtcggaaaccggtgcg 34346290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 8410137 - 8410188
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| |||| |||||| ||||  |||||||||||||||||||||    
T  8410137 ggttcgattcccagggggaacaacacttggccagtgcgcatgcctctacgca 8410188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 549
Target Start/End: Original strand, 37560179 - 37560270
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    |||||||||| |  ||| ||||||| ||| ||||||||||||||||||||||  ||   ||||| |||| |||||||| |||||| ||||||    
T  37560179 ggttcgattctcaaggggaacaacgtttggtcagtgcgcatgcctctacgcacgagccggattaatcgtccacctttgatgggtcgaaaacc 37560270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 510
Target Start/End: Original strand, 41187872 - 41187907
Alignment:
Q  475 aaacaacgcttgatcagtgcgcatgcctctacgcat 510  Q
    ||||||||||||| ||||||||||||||||||||||    
T  41187872 aaacaacgcttgaccagtgcgcatgcctctacgcat 41187907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 549
Target Start/End: Complemental strand, 42770751 - 42770660
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaacc 549  Q
    ||||| |||| | |||| |||||||||||  |||||||||||||||| ||||  ||   ||||| |||| ||||||||||||||| ||||||    
T  42770751 ggttcaattctcagggggaacaacgcttggccagtgcgcatgcctcttcgcacgagccggattaatcgtccacctttggtgggtcgaaaacc 42770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 509
Target Start/End: Original strand, 44139490 - 44139541
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| |||| |||||||||||  |||||||| ||||||||||||    
T  44139490 ggttcgattcccagggggaacaacgcttggccagtgcgcgtgcctctacgca 44139541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 476 - 534
Target Start/End: Original strand, 10106612 - 10106670
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcaccttt 534  Q
    ||||||||||||| || |||||||| |||| ||||||||  |||||||||| |||||||    
T  10106612 aacaacgcttgattagcgcgcatgcttctatgcataagtcggattagtcgtccaccttt 10106670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 10823066 - 10823163
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||| ||||||| || | |||||||||||  |||||||||||||||||||||  ||   |||||||||  ||||||| |||||||  ||||| |||||    
T  10823066 ggtttgattcccaggaggaacaacgcttggccagtgcgcatgcctctacgcacgagccggattagtcgcccaccttttgtgggtcggaaaccggtgcg 10823163  T

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Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 509
Target Start/End: Original strand, 29653635 - 29653684
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    ||||||| || ||| ||||||||||||  |||||||||||||||||||||    
T  29653635 ttcgatttccagggaaaacaacgcttgggcagtgcgcatgcctctacgca 29653684  T

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Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 34356212 - 34356309
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || |||| |||||| |||| |||||||||||||||||| |||| ||   ||||| |||| |||| ||| ||||||  |||| ||||||    
T  34356212 ggttcgatttccagggggaacaacacttggtcagtgcgcatgcctctatgcatgagccggattaatcgtgcaccattgatgggtcggaaacgagtgcg 34356309  T

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Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 541
Target Start/End: Original strand, 16888 - 16971
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggt 541  Q
    ||||| |||| | |||||||||||||||| |||||||| ||| |||||||||  ||   ||||||||| |||||||||||||||    
T  16888 ggttcaattctcaggggaaacaacgcttggtcagtgcgtatgtctctacgcacgagccagattagtcgctcacctttggtgggt 16971  T

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Target: scaffold0209 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 476 - 535
Target Start/End: Original strand, 12600 - 12659
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttg 535  Q
    |||||||||||| |||||||||||||||||||||| |||  |||||||||  ||||||||    
T  12600 aacaacgcttgaccagtgcgcatgcctctacgcatgagtcggattagtcgcccacctttg 12659  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 555
Target Start/End: Original strand, 68526 - 68620
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||| |||| |||||||||||    |||||||||||||||||||  ||   |||||||||  ||||||||||||||| |||||| |||||    
T  68526 ggttcgattcccagggggaacaacgcttgg---gtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtcgaaaaccggtgcg 68620  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 509
Target Start/End: Complemental strand, 271174 - 271123
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgca 509  Q
    |||||||||||| |||| ||||||||||| |||||||||||| |||||||||    
T  271174 ggttcgattcccagggggaacaacgcttggtcagtgcgcatgtctctacgca 271123  T

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Target: scaffold0010 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 155809 - 155727
Alignment:
Q  460 ttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtc 542  Q
    |||||||||| |||| |||||||||||   ||||||||||||||||||||  ||   |||||||||  |||||||||||||||    
T  155809 ttcgattcccagggggaacaacgcttggctagtgcgcatgcctctacgcacgagccggattagtcgcccacctttggtgggtc 155727  T

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Target: scaffold0316 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 1714 - 1617
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    ||||||||| || |||| ||||||| ||   |||||||||||||||||||||| ||    ||||||||  ||||||||||||||| |||||| |||||    
T  1714 ggttcgatttccagggggaacaacgattagccagtgcgcatgcctctacgcatgagccaaattagtcgcccacctttggtgggtcgaaaaccggtgcg 1617  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 555
Target Start/End: Complemental strand, 42932 - 42835
Alignment:
Q  458 ggttcgattccctggggaaacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcacctttggtgggtcaaaaaccagtgcg 555  Q
    |||||||||||  |||  ||||| ||||| ||||||||||||||||||| ||| ||   |||||||||  |||||||||||||||  ||||| |||||    
T  42932 ggttcgattcctagggagaacaatgcttggtcagtgcgcatgcctctacacatgagccggattagtcgcccacctttggtgggtcggaaaccggtgcg 42835  T

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Target: scaffold0635 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 476 - 534
Target Start/End: Complemental strand, 2172 - 2114
Alignment:
Q  476 aacaacgcttgatcagtgcgcatgcctctacgcataagtatgattagtcgttcaccttt 534  Q
    ||||||||||||| || |||||||| |||| ||||||||  |||||||||| |||||||    
T  2172 aacaacgcttgattagcgcgcatgcttctatgcataagtcggattagtcgtccaccttt 2114  T

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