View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15910_high_2 (Length: 291)
Name: NF15910_high_2
Description: NF15910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15910_high_2 |
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Alignment Details
Target: chr1 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 275
Target Start/End: Original strand, 46875993 - 46876257
Alignment:
| Q |
11 |
caaaggcataaagtacatgtgctgttggggaatcactaataatgcactagctagctttaggtgctgttgtatttgtatagataggtttgtgacttgtgag |
110 |
Q |
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| T |
46875993 |
caaaggcataaagtacatgtgctgttggggaatcactaataatgcactagctagctttaggtactgttgtatttgtatagataggtttgtgacttgtgag |
46876092 |
T |
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| Q |
111 |
tagggttttctaatgattctgttacttatctaaacatctggtagggtaaaccaagctggtgaatagacagagtttcttgttcttttctatagaaaattaa |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46876093 |
tagggttttctaatgattctgttacttatctaaacatctggtagggtaaaccaagctggtgaatagacagagtttcttgttcttttctatagaaaattaa |
46876192 |
T |
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| Q |
211 |
gatcaatgaaaagcgagattaagattgcaatttgctgggttgcttagtataggaacacacaaatg |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46876193 |
gatcaatgaaaagcgagattaagattgcaatttgctgggttgcttagtataggaacacacaaatg |
46876257 |
T |
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