View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15910_low_1 (Length: 307)

Name: NF15910_low_1
Description: NF15910
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15910_low_1
NF15910_low_1
[»] chr7 (57 HSPs)
chr7 (16-227)||(38505332-38505543)
chr7 (20-231)||(4058138-4058352)
chr7 (20-213)||(43741593-43741784)
chr7 (56-233)||(15748987-15749164)
chr7 (42-231)||(16805591-16805780)
chr7 (16-125)||(33872108-33872218)
chr7 (20-182)||(45940402-45940564)
chr7 (16-227)||(43348227-43348437)
chr7 (19-232)||(2826238-2826460)
chr7 (16-182)||(6746567-6746730)
chr7 (42-230)||(42253829-42254015)
chr7 (16-227)||(30080844-30081065)
chr7 (16-116)||(24924578-24924677)
chr7 (16-116)||(38137924-38138024)
chr7 (16-130)||(30183817-30183929)
chr7 (59-223)||(19791563-19791730)
chr7 (16-116)||(31891269-31891369)
chr7 (19-231)||(34670064-34670276)
chr7 (61-182)||(4125867-4125985)
chr7 (42-124)||(32650415-32650497)
chr7 (41-182)||(42112982-42113121)
chr7 (17-74)||(45510377-45510434)
chr7 (16-60)||(14676279-14676323)
chr7 (16-125)||(17818280-17818379)
chr7 (16-130)||(41471418-41471531)
chr7 (16-93)||(5968041-5968118)
chr7 (69-229)||(46442579-46442738)
chr7 (16-116)||(23551641-23551739)
chr7 (20-116)||(30081361-30081457)
chr7 (16-124)||(43741322-43741430)
chr7 (20-116)||(1277921-1278027)
chr7 (88-182)||(3892710-3892805)
chr7 (17-92)||(46745587-46745661)
chr7 (20-116)||(13697265-13697371)
chr7 (49-115)||(31055359-31055424)
chr7 (20-96)||(32429933-32430008)
chr7 (13-57)||(38235846-38235890)
chr7 (13-53)||(42220093-42220133)
chr7 (16-110)||(19644290-19644385)
chr7 (50-125)||(23550762-23550837)
chr7 (56-181)||(35264910-35265033)
chr7 (10-81)||(42010170-42010241)
chr7 (33-84)||(44720104-44720155)
chr7 (20-54)||(17884187-17884221)
chr7 (20-70)||(42593113-42593163)
chr7 (13-51)||(42620337-42620375)
chr7 (43-93)||(47276027-47276077)
chr7 (16-45)||(10591892-10591921)
chr7 (42-137)||(20513274-20513366)
chr7 (16-49)||(25335367-25335400)
chr7 (57-118)||(44487356-44487417)
chr7 (13-49)||(12624359-12624395)
chr7 (20-48)||(13044208-13044236)
chr7 (20-52)||(19791724-19791756)
chr7 (13-49)||(33187832-33187868)
chr7 (16-48)||(42266995-42267027)
chr7 (14-74)||(48935005-48935065)
[»] chr8 (53 HSPs)
chr8 (16-227)||(41866115-41866325)
chr8 (16-228)||(79611-79824)
chr8 (42-229)||(21173882-21174068)
chr8 (20-227)||(26772644-26772850)
chr8 (10-227)||(14581740-14581956)
chr8 (42-227)||(23932582-23932766)
chr8 (16-190)||(34335950-34336123)
chr8 (13-130)||(12506181-12506308)
chr8 (16-152)||(44251556-44251691)
chr8 (20-170)||(32091-32242)
chr8 (16-215)||(43239554-43239762)
chr8 (16-182)||(39193848-39194024)
chr8 (20-116)||(28416163-28416258)
chr8 (20-116)||(31305777-31305872)
chr8 (61-227)||(8228406-8228571)
chr8 (16-130)||(31149882-31149995)
chr8 (20-106)||(39778809-39778893)
chr8 (41-116)||(1839843-1839918)
chr8 (20-79)||(6943458-6943517)
chr8 (20-82)||(16424164-16424227)
chr8 (20-82)||(36837490-36837552)
chr8 (16-132)||(43007685-43007791)
chr8 (58-130)||(4873299-4873371)
chr8 (16-125)||(13258473-13258579)
chr8 (16-52)||(12595370-12595406)
chr8 (21-56)||(8228596-8228631)
chr8 (10-122)||(13369894-13370016)
chr8 (107-214)||(36837563-36837669)
chr8 (27-85)||(45308297-45308355)
chr8 (16-53)||(1111123-1111160)
chr8 (16-49)||(1840199-1840232)
chr8 (20-57)||(35616612-35616649)
chr8 (14-116)||(40985060-40985172)
chr8 (139-223)||(6943554-6943638)
chr8 (42-126)||(10589777-10589861)
chr8 (16-198)||(29584095-29584267)
chr8 (16-83)||(34148567-34148632)
chr8 (56-116)||(41455240-41455299)
chr8 (20-50)||(27085407-27085437)
chr8 (13-91)||(35856515-35856592)
chr8 (20-49)||(1839812-1839841)
chr8 (20-53)||(23963031-23963064)
chr8 (10-51)||(31297330-31297371)
chr8 (20-100)||(32158773-32158854)
chr8 (10-74)||(39405095-39405159)
chr8 (16-48)||(13865080-13865112)
chr8 (20-52)||(13949743-13949775)
chr8 (11-43)||(14641463-14641495)
chr8 (13-73)||(20992690-20992750)
chr8 (16-44)||(23702468-23702496)
chr8 (43-87)||(31297373-31297417)
chr8 (21-57)||(44879598-44879634)
chr8 (21-57)||(44880287-44880323)
[»] chr5 (44 HSPs)
chr5 (16-227)||(10437858-10438069)
chr5 (16-190)||(38568365-38568544)
chr5 (20-229)||(5772722-5772930)
chr5 (17-190)||(14570039-14570212)
chr5 (20-229)||(35683465-35683684)
chr5 (20-190)||(10842954-10843123)
chr5 (42-227)||(39649442-39649628)
chr5 (10-227)||(18675705-18675921)
chr5 (16-113)||(19389816-19389912)
chr5 (17-125)||(9096293-9096401)
chr5 (50-225)||(10955722-10955900)
chr5 (20-231)||(35708754-35708966)
chr5 (49-151)||(13569312-13569413)
chr5 (16-89)||(3676503-3676576)
chr5 (13-140)||(37908960-37909087)
chr5 (17-116)||(9684780-9684879)
chr5 (20-116)||(3938123-3938228)
chr5 (16-182)||(15974257-15974433)
chr5 (20-207)||(43496873-43497045)
chr5 (51-179)||(8943967-8944094)
chr5 (16-60)||(17668122-17668166)
chr5 (60-227)||(18670905-18671071)
chr5 (24-80)||(32125269-32125325)
chr5 (33-136)||(29709486-29709589)
chr5 (16-95)||(41923172-41923251)
chr5 (16-82)||(12150599-12150665)
chr5 (16-121)||(3925779-3925883)
chr5 (18-74)||(13293974-13294030)
chr5 (21-125)||(6491158-6491272)
chr5 (20-67)||(13450511-13450558)
chr5 (17-130)||(21916295-21916405)
chr5 (10-116)||(29799630-29799736)
chr5 (49-187)||(39027653-39027790)
chr5 (13-46)||(9621926-9621959)
chr5 (17-49)||(33682432-33682464)
chr5 (16-123)||(2561080-2561186)
chr5 (17-116)||(31535302-31535399)
chr5 (20-54)||(1935099-1935133)
chr5 (18-96)||(32750644-32750722)
chr5 (17-51)||(38120177-38120211)
chr5 (10-51)||(1658235-1658276)
chr5 (16-61)||(5696568-5696613)
chr5 (58-114)||(6373123-6373178)
chr5 (10-54)||(12096958-12097002)
[»] chr4 (58 HSPs)
chr4 (20-227)||(29114235-29114443)
chr4 (16-225)||(49668102-49668310)
chr4 (50-225)||(38136866-38137041)
chr4 (42-229)||(12708858-12709045)
chr4 (20-227)||(45823427-45823634)
chr4 (49-230)||(33500389-33500569)
chr4 (56-225)||(16318491-16318660)
chr4 (50-226)||(30198803-30198979)
chr4 (51-187)||(45971474-45971608)
chr4 (16-231)||(46176925-46177140)
chr4 (50-223)||(28175496-28175669)
chr4 (49-232)||(41709150-41709331)
chr4 (16-223)||(55509764-55509970)
chr4 (22-137)||(35959158-35959273)
chr4 (20-169)||(368001-368146)
chr4 (20-133)||(47063659-47063771)
chr4 (16-137)||(49936477-49936595)
chr4 (18-137)||(8828200-8828316)
chr4 (20-116)||(13984966-13985062)
chr4 (24-89)||(48417606-48417671)
chr4 (86-182)||(52636678-52636774)
chr4 (14-73)||(34236511-34236570)
chr4 (49-116)||(42650619-42650686)
chr4 (16-123)||(51974304-51974410)
chr4 (17-88)||(9020955-9021026)
chr4 (10-116)||(21443006-21443121)
chr4 (16-89)||(23708156-23708229)
chr4 (84-223)||(16422795-16422933)
chr4 (20-80)||(28880020-28880080)
chr4 (16-100)||(31428810-31428894)
chr4 (20-141)||(50494646-50494770)
chr4 (17-100)||(24682985-24683068)
chr4 (20-84)||(48620312-48620378)
chr4 (13-131)||(27143145-27143274)
chr4 (16-110)||(37756711-37756805)
chr4 (58-116)||(52430595-52430653)
chr4 (17-54)||(15451325-15451362)
chr4 (16-60)||(9836760-9836804)
chr4 (16-51)||(16535749-16535784)
chr4 (16-51)||(24279972-24280007)
chr4 (59-118)||(30307354-30307413)
chr4 (16-54)||(8827808-8827846)
chr4 (16-54)||(16422968-16423006)
chr4 (94-148)||(22165699-22165752)
chr4 (16-50)||(40423061-40423095)
chr4 (64-134)||(46669991-46670060)
chr4 (10-116)||(51258721-51258827)
chr4 (43-125)||(54205813-54205895)
chr4 (51-116)||(4442012-4442077)
chr4 (17-54)||(15498783-15498820)
chr4 (42-87)||(45899406-45899451)
chr4 (14-54)||(22891273-22891313)
chr4 (14-54)||(22942937-22942977)
chr4 (42-126)||(25843817-25843901)
chr4 (17-57)||(42759640-42759680)
chr4 (14-74)||(42777286-42777345)
chr4 (18-54)||(43793452-43793488)
chr4 (16-60)||(47669859-47669903)
[»] chr1 (58 HSPs)
chr1 (16-231)||(27255077-27255292)
chr1 (16-229)||(17760473-17760687)
chr1 (16-227)||(36886742-36886962)
chr1 (20-225)||(52068139-52068347)
chr1 (20-232)||(34154330-34154542)
chr1 (16-227)||(36269615-36269836)
chr1 (19-182)||(33324551-33324713)
chr1 (16-190)||(50225949-50226123)
chr1 (49-182)||(5584422-5584555)
chr1 (42-227)||(29091959-29092143)
chr1 (51-229)||(37649649-37649827)
chr1 (20-230)||(17556537-17556750)
chr1 (42-182)||(46001484-46001623)
chr1 (16-130)||(43036311-43036424)
chr1 (49-213)||(41817330-41817493)
chr1 (17-116)||(28848788-28848887)
chr1 (16-182)||(39886912-39887090)
chr1 (15-122)||(42333622-42333728)
chr1 (18-137)||(69696-69824)
chr1 (14-115)||(30543349-30543450)
chr1 (17-229)||(52073447-52073659)
chr1 (13-125)||(5970426-5970538)
chr1 (16-227)||(50586920-50587127)
chr1 (19-140)||(7915472-7915603)
chr1 (42-119)||(2909098-2909175)
chr1 (16-93)||(15463826-15463903)
chr1 (20-116)||(35619506-35619602)
chr1 (16-92)||(51246562-51246637)
chr1 (10-116)||(25561300-25561414)
chr1 (120-231)||(38795431-38795542)
chr1 (20-116)||(49102964-49103050)
chr1 (20-108)||(34750007-34750095)
chr1 (16-116)||(50476521-50476621)
chr1 (42-116)||(24436956-24437030)
chr1 (26-116)||(40243354-40243444)
chr1 (42-116)||(41432790-41432863)
chr1 (42-116)||(42806155-42806227)
chr1 (22-54)||(28718807-28718839)
chr1 (16-56)||(33854827-33854867)
chr1 (16-56)||(33926055-33926095)
chr1 (18-54)||(38795396-38795432)
chr1 (49-137)||(41428025-41428112)
chr1 (16-52)||(41432750-41432786)
chr1 (20-86)||(45752229-45752292)
chr1 (13-80)||(666303-666370)
chr1 (16-51)||(2925923-2925958)
chr1 (14-52)||(1063392-1063430)
chr1 (90-140)||(32672573-32672623)
chr1 (16-50)||(36325774-36325808)
chr1 (69-190)||(4204830-4204948)
chr1 (20-49)||(6015491-6015520)
chr1 (13-46)||(27102809-27102842)
chr1 (16-53)||(34738372-34738409)
chr1 (17-49)||(33579313-33579345)
chr1 (19-55)||(37955232-37955268)
chr1 (16-60)||(38795020-38795064)
chr1 (13-57)||(41427979-41428023)
chr1 (16-100)||(50162145-50162228)
[»] chr6 (33 HSPs)
chr6 (20-225)||(32719378-32719582)
chr6 (56-233)||(1567147-1567324)
chr6 (10-227)||(33590311-33590536)
chr6 (16-183)||(32221919-32222095)
chr6 (16-229)||(26713733-26713946)
chr6 (20-187)||(20820532-20820698)
chr6 (43-190)||(11180184-11180330)
chr6 (16-229)||(12779387-12779606)
chr6 (20-181)||(28551887-28552048)
chr6 (49-224)||(24874966-24875138)
chr6 (16-116)||(13380523-13380624)
chr6 (14-87)||(29054589-29054662)
chr6 (16-206)||(33754947-33755132)
chr6 (19-123)||(34557163-34557267)
chr6 (18-57)||(15615719-15615758)
chr6 (50-232)||(6855502-6855683)
chr6 (10-54)||(25072513-25072557)
chr6 (20-144)||(33212287-33212409)
chr6 (30-124)||(6688048-6688144)
chr6 (71-134)||(25073299-25073361)
chr6 (13-131)||(2502351-2502480)
chr6 (26-83)||(4027026-4027083)
chr6 (18-116)||(18618199-18618297)
chr6 (16-54)||(19477311-19477349)
chr6 (20-53)||(15986399-15986432)
chr6 (16-53)||(26289607-26289644)
chr6 (16-57)||(31345359-31345400)
chr6 (56-116)||(4464929-4464988)
chr6 (10-74)||(6218676-6218740)
chr6 (142-190)||(6671429-6671477)
chr6 (15-74)||(6695330-6695390)
chr6 (20-92)||(20381858-20381929)
chr6 (14-54)||(26683372-26683412)
[»] chr2 (63 HSPs)
chr2 (20-229)||(31082688-31082894)
chr2 (20-182)||(1364750-1364912)
chr2 (20-227)||(6655990-6656199)
chr2 (42-227)||(11514916-11515101)
chr2 (42-229)||(13018502-13018689)
chr2 (42-223)||(37194142-37194324)
chr2 (20-223)||(15555347-15555550)
chr2 (20-116)||(15803171-15803267)
chr2 (42-221)||(34757483-34757662)
chr2 (10-183)||(41100097-41100269)
chr2 (42-182)||(26905721-26905861)
chr2 (56-227)||(4003300-4003471)
chr2 (16-231)||(21625992-21626218)
chr2 (17-229)||(35550147-35550366)
chr2 (42-227)||(43572568-43572757)
chr2 (26-230)||(39750027-39750223)
chr2 (16-125)||(14385064-14385173)
chr2 (21-173)||(1270695-1270856)
chr2 (16-152)||(39204963-39205110)
chr2 (16-187)||(28539414-28539594)
chr2 (16-166)||(43190537-43190686)
chr2 (16-123)||(16813611-16813717)
chr2 (16-123)||(16852890-16852996)
chr2 (76-182)||(30072466-30072572)
chr2 (21-125)||(5322122-5322226)
chr2 (20-87)||(39913267-39913334)
chr2 (42-116)||(31584790-31584863)
chr2 (42-227)||(40211876-40212060)
chr2 (16-92)||(13767436-13767511)
chr2 (42-116)||(12941822-12941896)
chr2 (80-190)||(18589988-18590098)
chr2 (10-110)||(30312397-30312497)
chr2 (19-74)||(25292204-25292259)
chr2 (42-116)||(9087489-9087562)
chr2 (50-190)||(36642387-36642524)
chr2 (49-170)||(30523176-30523296)
chr2 (56-230)||(36870132-36870306)
chr2 (14-74)||(5002773-5002833)
chr2 (42-230)||(16519113-16519300)
chr2 (49-121)||(21834919-21834991)
chr2 (23-74)||(33206821-33206872)
chr2 (16-54)||(567441-567479)
chr2 (16-50)||(16625792-16625826)
chr2 (87-181)||(41656711-41656804)
chr2 (20-106)||(11522172-11522267)
chr2 (13-57)||(31899341-31899385)
chr2 (20-56)||(35412213-35412249)
chr2 (16-80)||(38216505-38216569)
chr2 (16-83)||(6128842-6128908)
chr2 (14-73)||(15234851-15234910)
chr2 (17-60)||(29358770-29358813)
chr2 (10-52)||(12286973-12287015)
chr2 (19-53)||(13961604-13961638)
chr2 (14-48)||(16465145-16465179)
chr2 (12-54)||(26599233-26599275)
chr2 (49-135)||(26599280-26599366)
chr2 (27-116)||(11373768-11373857)
chr2 (13-46)||(22101661-22101694)
chr2 (51-116)||(30072095-30072159)
chr2 (16-45)||(37217019-37217048)
chr2 (13-49)||(1725969-1726005)
chr2 (13-49)||(8555761-8555797)
chr2 (13-41)||(18590106-18590134)
[»] chr3 (61 HSPs)
chr3 (16-229)||(49183562-49183778)
chr3 (25-224)||(50535108-50535308)
chr3 (16-231)||(3537076-3537299)
chr3 (20-190)||(38639498-38639668)
chr3 (20-182)||(53664601-53664763)
chr3 (16-190)||(37674141-37674312)
chr3 (16-181)||(44400628-44400792)
chr3 (20-227)||(25754104-25754309)
chr3 (42-190)||(33944664-33944811)
chr3 (16-229)||(1132923-1133137)
chr3 (51-161)||(45570976-45571086)
chr3 (16-125)||(47359293-47359402)
chr3 (43-229)||(48908899-48909084)
chr3 (13-122)||(35989094-35989202)
chr3 (42-182)||(33908973-33909112)
chr3 (49-187)||(5939812-5939950)
chr3 (51-182)||(50948122-50948254)
chr3 (16-137)||(40118885-40119003)
chr3 (42-227)||(517656-517838)
chr3 (10-107)||(39114946-39115041)
chr3 (20-228)||(35282960-35283176)
chr3 (11-182)||(27197170-27197350)
chr3 (20-122)||(51686484-51686595)
chr3 (60-124)||(22225341-22225405)
chr3 (21-116)||(33281709-33281804)
chr3 (10-182)||(34729319-34729489)
chr3 (42-126)||(15499323-15499407)
chr3 (24-116)||(24588289-24588381)
chr3 (16-84)||(34306623-34306691)
chr3 (20-96)||(52620827-52620903)
chr3 (10-116)||(38401901-38402008)
chr3 (16-223)||(41099716-41099931)
chr3 (20-116)||(53888470-53888576)
chr3 (16-227)||(32858701-32858923)
chr3 (16-87)||(2420682-2420752)
chr3 (20-57)||(3333916-3333953)
chr3 (57-114)||(44979404-44979461)
chr3 (10-181)||(1339881-1340061)
chr3 (16-60)||(46312408-46312452)
chr3 (20-87)||(48370181-48370249)
chr3 (13-116)||(48444490-48444601)
chr3 (16-124)||(16883330-16883438)
chr3 (13-56)||(47076896-47076939)
chr3 (16-59)||(54877995-54878038)
chr3 (59-125)||(7435656-7435721)
chr3 (16-46)||(28569512-28569542)
chr3 (20-50)||(29623295-29623325)
chr3 (24-74)||(53620288-53620338)
chr3 (22-83)||(2927868-2927929)
chr3 (59-116)||(11500087-11500144)
chr3 (49-130)||(21856022-21856103)
chr3 (41-74)||(42668076-42668109)
chr3 (56-116)||(3458324-3458383)
chr3 (10-54)||(19793445-19793489)
chr3 (42-118)||(31651469-31651545)
chr3 (11-51)||(45555691-45555731)
chr3 (16-60)||(47714661-47714705)
chr3 (155-230)||(47789583-47789658)
chr3 (24-60)||(50201615-50201651)
chr3 (24-60)||(54372572-54372608)
chr3 (20-48)||(54748315-54748343)
[»] scaffold0128 (1 HSPs)
scaffold0128 (42-227)||(26251-26437)
[»] scaffold0136 (1 HSPs)
scaffold0136 (58-230)||(2063-2234)
[»] scaffold0002 (1 HSPs)
scaffold0002 (16-190)||(90873-91047)
[»] scaffold0263 (1 HSPs)
scaffold0263 (16-182)||(12247-12413)
[»] scaffold0248 (1 HSPs)
scaffold0248 (16-225)||(184-403)
[»] scaffold0051 (4 HSPs)
scaffold0051 (16-227)||(6745-6967)
scaffold0051 (16-227)||(7728-7950)
scaffold0051 (16-227)||(679-902)
scaffold0051 (16-227)||(3556-3779)
[»] scaffold0031 (1 HSPs)
scaffold0031 (42-230)||(93530-93708)
[»] scaffold0119 (2 HSPs)
scaffold0119 (21-173)||(30381-30542)
scaffold0119 (20-173)||(37047-37210)
[»] scaffold0053 (1 HSPs)
scaffold0053 (20-182)||(29162-29333)
[»] scaffold0036 (1 HSPs)
scaffold0036 (18-125)||(82770-82877)
[»] scaffold0991 (1 HSPs)
scaffold0991 (16-221)||(3130-3332)
[»] scaffold0388 (2 HSPs)
scaffold0388 (86-173)||(6996-7083)
scaffold0388 (16-52)||(7128-7164)
[»] scaffold0063 (1 HSPs)
scaffold0063 (42-87)||(56560-56605)
[»] scaffold0140 (1 HSPs)
scaffold0140 (27-67)||(19415-19455)
[»] scaffold0598 (1 HSPs)
scaffold0598 (14-49)||(9391-9426)
[»] scaffold1763 (1 HSPs)
scaffold1763 (16-80)||(1285-1349)
[»] scaffold0059 (1 HSPs)
scaffold0059 (20-87)||(17499-17567)


Alignment Details
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 38505332 - 38505543
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||| |||||||||||||||  |||||||||||||    
T  38505332 atagattaaatttgaagaattcatataaaccctccaaaaccctcctccaatacaattttatagttcccccaaatgaggagggttttgtattatgaagaaa 38505431  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    |||||||||| |||| |||||| || |||||||||||  ||||||| ||||||||||| |||||||| ||||||| || || ||||||||| ||||||||    
T  38505432 agttaaccccccaaagccctcccctcccattttcctctatttcttccacttgctcattccttttttcccaagccttcccctcccttcccctccaaactcg 38505531  T
Q  216 gaaacaaagcct 227  Q
     |||||||||||    
T  38505532 caaacaaagcct 38505543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 4058138 - 4058352
Alignment:
Q  20 attaaatttgaagaattcat---ataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||||||||| |   || |||||||||||| |||| ||||||| |||||| ||||| | | ||| |||||||||||  ||||||||||||||    
T  4058138 attaaatttgaagaattcttcttattaaccctccaaaaccctcatccaatacaattttttagttgctccaaacgaggagggttttgtattatgaagaaaa 4058237  T
Q  117 gttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcgg 216  Q
    ||||||||| |||| ||||| |||||||||||||||  ||||||| |||| || |||| ||||||| |||| || || || ||||||||| ||||||||     
T  4058238 gttaaccccccaaagccctcatcttccattttcctctatttcttccacttacttattttttttttcccaagtcttcccctcccttcccctccaaactcgc 4058337  T
Q  217 aaacaaagccttaga 231  Q
    |||||||||||||||    
T  4058338 aaacaaagccttaga 4058352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 43741784 - 43741593
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    ||||||||||||||||||||| ||||||  ||||||||||||  |||| ||||||  ||||| || |||||||||| ||||  |||||||||||||||||    
T  43741784 attaaatttgaagaattcatacaaaccccacaaaatcctcctttaatacaatttttgagttctcccaaatgaggagagttttgtattatgaagaaaagtt 43741685  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaact 213  Q
    ||  |||||||||||||| || |||||||||||  ||||||  ||||||||||| |||||||||||||||| || ||  |||||||| ||||||    
T  43741684 aa--ccacaaaaccctcccctcccattttcctctatttctttcacttgctcattccttttttctcaagccttcccctcacttcccctccaaact 43741593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 15748987 - 15749164
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgtt 155  Q
    |||| ||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| | ||||||| |||||||| ||  |    
T  15748987 cctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcttctat 15749086  T
Q  156 ttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttagata 233  Q
    |||||| ||||||||||| ||||||||  |||||| || || ||||||||| |||||||| ||||||| |||||||||    
T  15749087 ttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaacaaaaccttagata 15749164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 231
Target Start/End: Original strand, 16805591 - 16805780
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||||||||| |||||| ||||||| | |||||| || |||||  ||||||||||||||||||| ||| |||| |||||||||     
T  16805591 aaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaagaaggttttgtattatgaagaaaagttaaacccccaaagccctcctctc 16805690  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttaga 231  Q
    |||||||||||  ||||||| |||| || ||| |||||||| |||| || || || ||||||||| |||||||| |||||||||||||||    
T  16805691 ccattttcctctctttcttccacttacttattccttttttcccaagtcttcccctcccttcccctccaaactcgcaaacaaagccttaga 16805780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 33872108 - 33872218
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc-tcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaa 114  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||  ||||||||| |||||||||||||||| ||||||||||||    
T  33872108 atagattaaatttgaagaattcatataaaccctccaaaaaccctcctccaatacaatttgttagttcccccaaatgaggagggtttagtattatgaagaa 33872207  T
Q  115 aagttaacccc 125  Q
    |||||||||||    
T  33872208 aagttaacccc 33872218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 45940402 - 45940564
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| ||||||||||||  || |||||||| |||||| ||||||| | |||||||||||||||  |||||||||||||||||    
T  45940402 attaaatttgaagaattcttattaaccctccaaaactctactccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtt 45940501  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    ||||||  ||| ||||| ||| |||||||| ||  ||||||| ||||| ||||||||||||||    
T  45940502 aaccccctaaagccctcatctcccattttcttctatttcttccacttgttcatttcttttttc 45940564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 43348227 - 43348437
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||| |||| |||||| ||||||||| |||| |||||| |||| ||||||||| |||    
T  43348227 atagattaaatttgaagaattcatattaaccctccaaaaccctcctctaatacaattttttagttcccccaaataaggaggatttagtattatgaaaaaa 43348326  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    ||||||| || |||| | |||| || |||||||||||  ||||||  ||||| |||||  ||||||| |||  || ||  |  |||||| |||||||| |    
T  43348327 agttaactcc-caaagctctcccctcccattttcctctatttctttcacttgatcattctttttttcccaaatcttcccttctcttccctttcaaacttg 43348425  T
Q  216 gaaacaaagcct 227  Q
     |||||||||||    
T  43348426 caaacaaagcct 43348437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 2826238 - 2826460
Alignment:
Q  19 gattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatattat 108  Q
    |||||||||||||||||||||||||| | ||||||||||          |||||||||| |||||| ||||||||| |||||||||||||||| ||||||    
T  2826238 gattaaatttgaagaattcatataaagcttccaaaatcccccaaaaccctcctccaatacaattttttagttcccccaaatgaggagggtttagtattat 2826337  T
Q  109 gaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttc 208  Q
    |||||||||||| | ||  ||| ||  | ||| |||||||||||  ||||||| ||||| ||||| |||||| | ||||||| || || | ||| ||| |    
T  2826338 gaagaaaagttagctcc-taaagcctacatctcccattttcctctatttcttccacttgttcattcctttttccccaagccttcccctccattctcctcc 2826436  T
Q  209 aaactcggaaacaaagccttagat 232  Q
    ||||||| |||||||| |||||||    
T  2826437 aaactcgcaaacaaagtcttagat 2826460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 6746567 - 6746730
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||| |||||||||||||||||||||||||||||||||  || ||||||||| ||||||  |||||||| |||||||||  ||||  |||||| ||||||    
T  6746567 ataggttaaatttgaagaattcatataaaccctccaaaccccccctccaatacaatttttgagttcccccaaatgaggaaagttttgtattataaagaaa 6746666  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    | |||||||| |||| |||||| || |||||||| ||   | |||| ||||||||||| ||||||||    
T  6746667 aattaaccccccaaagccctcccctcccattttcttc---tacttccacttgctcattccttttttc 6746730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 230
Target Start/End: Complemental strand, 42254015 - 42253829
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||| |||||||||||| ||||||| | |||||||||||||||  |||||||||| ||||||||||||  ||| || ||||||     
T  42254015 aaaccccccaaaaccctccttcaatataattttttagttcctccaaatgaggagggttttgtattatgaag-aaagttaacccc-taaagccttcctctc 42253918  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttag 230  Q
     ||||||||||  ||||||| |||| || ||| |||||||| |||||||  |  | ||||||||| |||| ||| ||||||||||||||    
T  42253917 tcattttcctctatttcttccacttacttattccttttttcccaagcctttccttcccttcccctccaaattcgcaaacaaagccttag 42253829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 30081065 - 30080844
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatc----------ctcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    ||||||||||| |||||||||||||||||||||| ||||||          ||| | ||||| |||||| | ||| ||  |||||| ||||||||  |||    
T  30081065 atagattaaatctgaagaattcatataaaccctctaaaatctcccaaaaccctctttcaatacaatttttttgtttcctcaaatgatgagggttttgtat 30080966  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccc 205  Q
    |||||||||||||||||| |   ||||||||| || |||||||||||  ||||||| |||||||| || ||||||||||||| || || || ||||| ||    
T  30080965 tatgaagaaaagttaacctctgcaaaccctcccctcccattttcctctatttcttccacttgctccttccttttttctcaagtcttcccctcccttctcc 30080866  T
Q  206 ttcaaactcggaaacaaagcct 227  Q
    | |||||||| ||| |||||||    
T  30080865 tacaaactcgcaaataaagcct 30080844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 116
Target Start/End: Original strand, 24924578 - 24924677
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||||| |||||||   ||||| |||| ||||||| |||||| | |||||||||||||||  |||||||||||||    
T  24924578 atagattaaatttgaagaattcatataaaccatccaaaactttcctcaaatacaattttcaagttcctc-aaatgaggagggttttgtattatgaagaaa 24924676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 38138024 - 38137924
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||| ||| ||||| | |||||||||||| || |||  || ||||| ||||||||||| |||  |||||||||||||    
T  38138024 atagattaaatttgaagaattcatatagaccttccaataccctcctccaatacaaattttgagctcccccaaatgaggaggattttgtattatgaagaaa 38137925  T
Q  116 a 116  Q
    |    
T  38137924 a 38137924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 30183929 - 30183817
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||| ||||||||||||||||| ||| |||||||||||||||||||| | |||||  |||||||||||||  |||||| |||  |||| ||||||||    
T  30183929 atagattgaatttgaagaattcatacaaagcctccaaaatcctcctccaaaacaattt--tagttccccaaaactaggaggattttgtattttgaagaaa 30183832  T
Q  116 agttaaccccacaaa 130  Q
    | | |||||| ||||    
T  30183831 aatgaacccctcaaa 30183817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 59 - 223
Target Start/End: Complemental strand, 19791730 - 19791563
Alignment:
Q  59 cctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttc 158  Q
    ||||||||| |||||| |||||||||||| ||||| ||||||| ||||||||||||||||||||| | ||||  ||||| || ||||||   ||  ||||    
T  19791730 cctccaatacaattttttagttccccaaa-tgaggtgggtttagtattatgaagaaaagttaacctc-caaagtcctcccctcccatttgtttctatttc 19791633  T
Q  159 ttcaacttgctcatttcttttttctcaagcct--ccct---ctaccttccccttcaaactcggaaacaaa 223  Q
    ||| ||||||||||| |||||||| ||| |||  ||||   || ||||||||| |||||||| |||||||    
T  19791632 ttccacttgctcattccttttttcccaaaccttcccctcccctcccttcccctccaaactcgcaaacaaa 19791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 31891369 - 31891269
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |  |||| || ||| ||||||||| || |||| ||  |||  |||||||||||||    
T  31891369 atagattaaatttgaagaattcatataaactctccaaaatcctctttaaatacaagtttttagttcccccaattgagaagcattttgtattatgaagaaa 31891270  T
Q  116 a 116  Q
    |    
T  31891269 a 31891269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 231
Target Start/End: Complemental strand, 34670276 - 34670064
Alignment:
Q  19 gattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    ||||||||| |||||||||||||||| |    |||| ||||||| |||| |||||  ||  || || ||||||||||| |||  ||||||||||||||||    
T  34670276 gattaaattcgaagaattcatataaatctcttaaaaccctcctctaatacaatttcttaagtcacccaaatgaggaggattttgtattatgaagaaaagt 34670177  T
Q  119 taaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaa 218  Q
    ||||||  ||||  | |   ||  ||||||||||  ||||||| |||||||| || |||||||| ||||| | || ||||||| |||| ||||| || ||    
T  34670176 taacccttcaaagtcgtttcctctcattttcctctatttcttctacttgctcgttccttttttcccaagcattcccctaccttaccctccaaacccgcaa 34670077  T
Q  219 acaaagccttaga 231  Q
    ||||| |||||||    
T  34670076 acaaaaccttaga 34670064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 4125985 - 4125867
Alignment:
Q  61 tccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttctt 160  Q
    ||||||| |||| | ||||||||  ||||||||||| |||| |||||||||||||||||||||||  | | |||||||||  ||||||||||  ||||||    
T  4125985 tccaatacaattgtttagttccc--aaatgaggaggatttagtattatgaagaaaagttaacccc-tatagccctcctctctcattttcctcaatttctt 4125889  T
Q  161 caacttgctcatttcttttttc 182  Q
    | |||||||||||  |||||||    
T  4125888 ccacttgctcattctttttttc 4125867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 32650415 - 32650497
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccc 124  Q
    |||||| ||||||||||||||||||  |||||| ||||||| | |||||||||||||||   || ||||||||||||||||||    
T  32650415 aaaccccccaaaatcctcctccaatgcaattttttagttcctccaaatgaggagggttttgaataatgaagaaaagttaaccc 32650497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 42112982 - 42113121
Alignment:
Q  41 taaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctct 140  Q
    ||||||| |||||| |||  ||||||| || ||| |||||||||||| ||||||| ||||| |||||||||||||| |||||||| ||||| ||||||||    
T  42112982 taaaccccccaaaaccctattccaatacaactttttagttccccaaa-tgaggagagtttagtattatgaagaaaaattaaccccccaaaa-cctcctct 42113079  T
Q  141 tccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
     ||| |   |||  ||||||| |||||||| || ||||||||    
T  42113080 cccaatggactctatttcttccacttgctccttccttttttc 42113121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 45510434 - 45510377
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||||||||||||||||||| | |||||||||||||| |||| ||||||||||||||    
T  45510434 tagattaaatttgaagaattcgtctaaaccctccaaaaccctcatccaatataatttt 45510377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 14676323 - 14676279
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  14676323 atagattaaatttgaagaattcatgtaaaccctccaaaatcctcc 14676279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 17818379 - 17818280
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||||||||| ||||||||||          ||||||| |||||| ||||||| | |||||| ||||||||  |||| ||||||||    
T  17818379 atagattaaatttgaagaattcatctaaaccctcc----------tccaatacaattttttagttcctctaaatgatgagggttttgtattctgaagaaa 17818290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 41471531 - 41471418
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||||||| |||||||| ||||||| ||||||||  |  ||||||  |||||||| ||||||||||| |||  |||| | ||||||    
T  41471531 atagattaaatttgaagaattcgtataaaccttccaaaaccctcctcc-gtgcaatttttcagttcccccaaatgaggaggattttgtattcttaagaaa 41471433  T
Q  116 agttaaccccacaaa 130  Q
    | | |||||| ||||    
T  41471432 aatgaaccccccaaa 41471418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 5968041 - 5968118
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgagg 93  Q
    ||||||| |||||||| ||||||||||||||||||| || ||||| | |||| ||||||  |||||||| ||||||||    
T  5968041 atagattgaatttgaaaaattcatataaaccctccataaccctcccctaatacaatttttgagttcccccaaatgagg 5968118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 46442738 - 46442579
Alignment:
Q  69 aattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaac-ttg 167  Q
    |||||| ||| |||||||| ||| |||| |||  ||||||||||||||||||||||| | || |||||| || |||||||||||  ||||| | || |||    
T  46442738 aattttttagctccccaaa-tgatgaggattttgtattatgaagaaaagttaaccccccgaagccctcccctcccattttcctctatttctcccactttg 46442640  T
Q  168 ctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcctta 229  Q
    ||| || |||| ||| | ||||| || || ||||||||| |||||||| || ||||||||||    
T  46442639 ctcgttcctttattc-ctagccttcccctcccttcccctccaaactcgcaaccaaagcctta 46442579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 23551739 - 23551641
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||| ||||||| ||||||||||||||||||| |||||  || |||||||| ||  || ||||| |||||||||||||||| ||  |||||||||||||    
T  23551739 atagaataaatttaaagaattcatataaacccttcaaaactct-ctccaatacaaccttttagtt-cccaaaatgaggagggctttgtattatgaagaaa 23551642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 30081457 - 30081361
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||||||||||| ||||||||||||||| |  || || ||| |||||| ||||||| | || |||| |||||||  |||| |||||||||    
T  30081457 attaaatttgaagaattcacataaaccctccaaaacctaccaccgatacaattttttagttcctccaagtgagaagggttttttattttgaagaaaa 30081361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 43741430 - 43741322
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||| |||||||| |||||||  |||||||   |||||||||| || ||| ||||| ||| |||||| || |||||  ||||||||| |||    
T  43741430 atagattaaatttaaagaattcgtataaacaatccaaaacattcctccaatacaactttttagttaccccaaatgatgaaggttttgtattatgaaaaaa 43741331  T
Q  116 agttaaccc 124  Q
    | |||||||    
T  43741330 aattaaccc 43741322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 1278027 - 1277921
Alignment:
Q  20 attaaatttgaagaattcatataaaccc----------tccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||||||||||||||||||||||||||          ||| |||  ||| ||||||| |||||| ||||||||||||||||||| ||||| ||||| ||    
T  1278027 attaaatttgaagaattcatataaaccctctcaaaccttccgaaactctcatccaatacaattttttagttccccaaaatgaggatggttttatattttg 1277928  T
Q  110 aagaaaa 116  Q
    |||||||    
T  1277927 aagaaaa 1277921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 182
Target Start/End: Complemental strand, 3892805 - 3892710
Alignment:
Q  88 atgaggagggtttaatattatgaagaaaagttaaccc-cacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| |||||| || ||||||| |||  ||||||  | ||||||||| ||||||||    
T  3892805 atgaggagggttcaatattataaagaaaagttaaccctcccaaatccctcccctcccatttttctctatttcttacatttgctcattccttttttc 3892710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 46745587 - 46745661
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgag 92  Q
    |||||| ||||| || ||||||||||||||| ||| ||||||||||||||| ||||||  |||||||| |||||||    
T  46745587 tagattgaatttaaaaaattcatataaaccc-ccagaatcctcctccaatacaatttttgagttcccccaaatgag 46745661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 13697371 - 13697265
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaa--tcc--------tcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||||||||||||||| |||||||||||||||||  |||        || ||||||| || ||| ||||||||| |||||||||||||||  |||||||    
T  13697371 attaaatttgaagaattaatataaaccctccaaaacttcccacaaccgtcttccaatacaactttttagttcccccaaatgaggagggttttgtattatg 13697272  T
Q  110 aagaaaa 116  Q
    |||||||    
T  13697271 aagaaaa 13697265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 31055424 - 31055359
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||| |||||||||||| |||||| ||||||||| ||||||||||||||| ||||| | ||||||    
T  31055424 ccaaaaccctcctccaatacaattttttagttcccc-aaatgaggagggttttatattttaaagaaa 31055359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 32429933 - 32430008
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagg 96  Q
    |||||||||||||||||||||||||||||| ||||  || |||||||| | ||||  ||||||||||| ||| ||||    
T  32429933 attaaatttgaagaattcatataaaccctcaaaaactct-ctccaatacattttttgagttccccaaattgaagagg 32430008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 38235890 - 38235846
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||    
T  38235890 aatatagattgaatttgaaaaattcatataaaccctccataatcc 38235846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 53
Target Start/End: Complemental strand, 42220133 - 42220093
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaa 53  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  42220133 aatatagattgaatttgaaaaattcatataaaccctccaaa 42220093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 19644385 - 19644290
Alignment:
Q  16 atagattaaatttgaagaa-ttcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatga 110  Q
    ||||||| |||||||| || |||||||||| ||||||||| |||| ||||||| ||||||  |||||||| |||| ||| || |||  ||||||||    
T  19644385 atagattgaatttgaaaaaattcatataaatcctccaaaaccctcatccaatacaatttttgagttcccctaaataagggggattttttattatga 19644290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 23550837 - 23550762
Alignment:
Q  50 caaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaacccc 125  Q
    |||||||||||||||||| ||   | ||||||||| ||||||  | ||||| ||||||||||||||| ||||||||    
T  23550837 caaaatcctcctccaatacaacgctttagttcccccaaatgaaaaaggttttatattatgaagaaaaattaacccc 23550762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 181
Target Start/End: Original strand, 35264910 - 35265033
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaa-tattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgt 154  Q
    |||||||||||| |||||| |||||||||||| ||| ||| ||||   |||||| ||||||||||||||||| ||  | |||||||  |||||| |||      
T  35264910 cctcctccaatacaattttttagttccccaaa-tgaagagtgtttttgtattattaagaaaagttaaccccaaaaccctctcctct--catttttctcta 35265006  T
Q  155 tttcttcaacttgctcatttctttttt 181  Q
     | |||||||||||||||| |||||||    
T  35265007 ctccttcaacttgctcattcctttttt 35265033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 10 - 81
Target Start/End: Original strand, 42010170 - 42010241
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttc 81  Q
    ||||||||| ||| |||||||| |||| |||||||||||| ||||||||| | || || |||||| ||||||    
T  42010170 aataatataaattgaatttgaataattaatataaaccctctaaaatcctctttcattacaattttatagttc 42010241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 44720155 - 44720104
Alignment:
Q  33 aattcatataaaccctccaaaatcctcctccaatataattttctagttcccc 84  Q
    ||||||||||||||||||| || |||||||||||| ||||||  ||||||||    
T  44720155 aattcatataaaccctccataaccctcctccaatacaatttttgagttcccc 44720104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 17884187 - 17884221
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||||||||||||||||||||||| |||||||    
T  17884187 attaaatttgaagaattcatataaaccgtccaaaa 17884221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 42593113 - 42593163
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataa 70  Q
    |||||||||||| ||||||| |||||||||||||| | |||||||| ||||    
T  42593113 attaaatttgaataattcatgtaaaccctccaaaaccatcctccaacataa 42593163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 42620337 - 42620375
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctcca 51  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  42620337 aatatagattgaatttgaaaaattcatataaaccctcca 42620375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 93
Target Start/End: Original strand, 47276027 - 47276077
Alignment:
Q  43 aaccctccaaaatcctcctccaatataattttctagttccccaaaatgagg 93  Q
    ||||| |||||||||||| |||||||||||||  |||||||| ||||||||    
T  47276027 aaccccccaaaatcctcccccaatataatttttgagttcccccaaatgagg 47276077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 45
Target Start/End: Original strand, 10591892 - 10591921
Alignment:
Q  16 atagattaaatttgaagaattcatataaac 45  Q
    ||||||||||||||||||||||||||||||    
T  10591892 atagattaaatttgaagaattcatataaac 10591921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 20513366 - 20513274
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcc 137  Q
    ||||||||||||   ||||||||||| |||||||| ||||| | |||| ||| || |||  |||||||||||||| | |||||| |||| ||||||    
T  20513366 aaaccctccaaa---ctcctccaatacaattttctggttcctccaaattagggggattttgtattatgaagaaaactaaaccccccaaagccctcc 20513274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 25335400 - 25335367
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctc 49  Q
    |||||||||||||||| |||||||||||||||||    
T  25335400 atagattaaatttgaaaaattcatataaaccctc 25335367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 44487356 - 44487417
Alignment:
Q  57 ctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    ||||||||||| |||||| ||||||| | ||||||||||  ||| ||||| |||||||||||    
T  44487356 ctcctccaatacaattttttagttcctctaaatgaggagaattttatattttgaagaaaagt 44487417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 12624359 - 12624395
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctc 49  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  12624359 aatatatattaaatttgaagaattcatataaaacctc 12624395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 13044236 - 13044208
Alignment:
Q  20 attaaatttgaagaattcatataaaccct 48  Q
    |||||||||||||||||||||||||||||    
T  13044236 attaaatttgaagaattcatataaaccct 13044208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Complemental strand, 19791756 - 19791724
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaa 52  Q
    ||||||||||||||||| |||||||||||||||    
T  19791756 attaaatttgaagaatttatataaaccctccaa 19791724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 33187832 - 33187868
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctc 49  Q
    |||||| |||| |||||||||||||||||||||||||    
T  33187832 aatatatattatatttgaagaattcatataaaccctc 33187868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 42266995 - 42267027
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccct 48  Q
    ||||||||||||||||| |||||||||||||||    
T  42266995 atagattaaatttgaagcattcatataaaccct 42267027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 48935065 - 48935005
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||| ||||||||| |||||||||| ||||| ||  |||| | |||||||||||||||||    
T  48935065 atataaattaaattttaagaattcatgtaaactctaaaaaaccatcctccaatataatttt 48935005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 41866115 - 41866325
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||| ||||||||||| ||||| |||||||||||| |||||| ||||| ||| |||| |||||||||||||||||||||||||    
T  41866115 atagattaaatttgaagaatttatataaacccttcaaaaccctcctccaatacaattttttagtttccccaaataaggagggtttaatattatgaagaaa 41866214  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    |||||| ||| | ||||||||| || ||||||||||   ||||||| |||||||||||  |||||||||||| || |  |||||||||||||||||||||    
T  41866215 agttaatccc-cgaaaccctcccctcccattttcctttatttcttccacttgctcattcattttttctcaagtcttctcctaccttccccttcaaactcg 41866313  T
Q  216 gaaacaaagcct 227  Q
     |||||||||||    
T  41866314 caaacaaagcct 41866325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 228
Target Start/End: Original strand, 79611 - 79824
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||    
T  79611 atagattaaatttgaagagttcatataaaccgtccaaaaccctcctccaatacaattttttagttcccccaaatgaggagggtttagtattatgaagaaa 79710  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcctccctctaccttccccttcaaactc 214  Q
    |  ||||||| |||| |||||| || |||||||||||  ||||||| |||||||| || | ||||||| ||||||| || || ||||||||| |||||||    
T  79711 acgtaaccccccaaagccctcccctcccattttcctctatttcttccacttgctcgttcctttttttcccaagccttcccctcccttcccctccaaactc 79810  T
Q  215 ggaaacaaagcctt 228  Q
    | ||||||||||||    
T  79811 gcaaacaaagcctt 79824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 21173882 - 21174068
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| ||||||||||||||||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| |||||||||     
T  21173882 aaaccccccaaaaccctcctccaatataattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccc-caaagccctcctctc 21173980  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcctta 229  Q
    |||||||| ||  ||||||| ||||||||||| ||||||||  |||| | || || |||||| || |||||||| |||||||||||||    
T  21173981 ccattttcttctatttcttccacttgctcattccttttttcctaagcattcccctcccttccactccaaactcgcaaacaaagcctta 21174068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 26772644 - 26772850
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| |||||||||||| |||| ||||||| |||||| |||||||   |||||| ||||||||  |||||||||||||||||    
T  26772644 attaaatttgaagaattcttattaaccctccaaaaccctcatccaatacaattttttagttccttcaaatgatgagggttttgtattatgaagaaaagtt 26772743  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaa 219  Q
    |||| | | ||| |||||||| |||||||| ||  ||||||| ||||||||||| ||||||||  |||||| ||||| |||| |||| |||||||| |||    
T  26772744 aacctc-ccaaagcctcctctcccattttcttctatttcttccacttgctcattccttttttcctaagccttcctctccctttccctccaaactcgcaaa 26772842  T
Q  220 caaagcct 227  Q
    ||||||||    
T  26772843 caaagcct 26772850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 10 - 227
Target Start/End: Original strand, 14581740 - 14581956
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||| |||||||||| ||||||||||| ||||||||||| |||| ||| |||||||| | |||| ||  ||||| |||||||||||||||| |||||||    
T  14581740 aataacatagattaaaattgaagaattcttataaaccctcaaaaaccctactccaatacagttttttaactcccccaaatgaggagggtttattattatg 14581839  T
Q  110 aagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttca 209  Q
    |||||||| ||| ||| |||| ||||||  ||| |||||||||  |||||||   ||||||||| |||||||| ||||||| || || | ||||||| ||    
T  14581840 aagaaaag-taaaccctcaaagccctcccattctattttcctctatttcttccggttgctcattccttttttcccaagccttcccctcctttcccctgca 14581938  T
Q  210 aactcggaaacaaagcct 227  Q
    |||||| |||||||||||    
T  14581939 aactcgcaaacaaagcct 14581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 23932582 - 23932766
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| ||||||||||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| |||||||||     
T  23932582 aaaccccccaaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccc-caaagccctcctctc 23932680  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
     ||||||||||  ||||||| ||||  | ||| |||||||| ||||||| ||  | ||||||||| |||||||| |||||||||||    
T  23932681 tcattttcctctatttcttccacttatttattccttttttcccaagccttcccttcccttcccctccaaactcgcaaacaaagcct 23932766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 34336123 - 34335950
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||||||  |||||  ||||||||||  |||||| ||||||||  ||||||||| |||||| ||| |||||||||    
T  34336123 atagattaaatttgaagaattcatataaacccctcaaaacactcctccaatgcaattttttagttccctcaaatgagga-ggtttagtatcatgaagaaa 34336025  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcct 190  Q
    |||||||||| |||| |||||| || ||||||||||   ||||||| ||||||||||| | |||||||||||||||    
T  34336024 agttaacccc-caaagccctcccctcccattttcctttatttcttccacttgctcattcctttttttctcaagcct 34335950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 130
Target Start/End: Original strand, 12506181 - 12506308
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaa----------atcctcctccaatataattttctagttccccaaaatgaggagggtttaa 102  Q
    |||||| ||||||||||||||||||||||||||||||||||          ||||| |||||||| |||||| ||||||||| |||||||||||||||||    
T  12506181 aatatatattaaatttgaagaattcatataaaccctccaaagcccccaaaaatccttctccaatacaattttttagttcccccaaatgaggagggtttaa 12506280  T
Q  103 tattatgaagaaaagttaaccccacaaa 130  Q
    |||| |||||||||||||||||| ||||    
T  12506281 tattttgaagaaaagttaaccccccaaa 12506308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 44251556 - 44251691
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||| || ||||| |||||||||| ||||||||||||| ||||   |||| ||||||| |||| |||| ||  |||| |||||||||||||    
T  44251556 atagattaaatttaaaaaattcgtataaacccttcaaaatcctcctcaaatactgttttttagttcctcaaa-tgagaagaatttagtattatgaagaaa 44251654  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctc 152  Q
    |||||||||  |||||||||||||| |||||||||||    
T  44251655 agttaacccttcaaaaccctcctctcccattttcctc 44251691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 170
Target Start/End: Complemental strand, 32242 - 32091
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||| |||||||||||||||||||||| || ||||  |||||| |||| |||||| ||||||| ||||||||  ||||||| ||  ||||||||||| ||    
T  32242 attacatttgaagaattcatataaaccgtcaaaaactctcctctaatacaattttgtagttcctcaaaatgaatagggttttattatatgaagaaaaatt 32143  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttctt-caacttgctc 170  Q
    |||||| ||||| | ||||||||||||||| ||  |||||| ||||||||||    
T  32142 aacccctcaaaatcatcctcttccattttcttctatttcttgcaacttgctc 32091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 43239762 - 43239554
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    ||||||||||||||||||||||||||||||||| ||||||||          || ||||||| |||||| || ||||||||| |||||||| |||  | |    
T  43239762 atagattaaatttgaagaattcatataaacccttcaaaatccctcaaaaacctcatccaatacaattttttaattccccaaa-tgaggaggcttttgtgt 43239664  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccc 205  Q
    ||||||||||||||||||||| ||| |||||| || |||||||||||  ||||||   |||  ||||| |||||||| ||||||| || || ||||||||    
T  43239663 tatgaagaaaagttaaccccataaagccctcccctcccattttcctctatttctttctcttattcattccttttttcacaagccttcccctcccttcccc 43239564  T
Q  206 ttcaaactcg 215  Q
    |  |||||||    
T  43239563 tctaaactcg 43239554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 39194024 - 39193848
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||          |||||||||| || ||| ||||||||| |||||| |||||||| ||||    
T  39194024 atagaataaatttgaagaattcatataaacccttcaaaacccccaaaaaccctcctccaatacaactttttagttcccccaaatgaagagggttttatat 39193925  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    ||||||||||| |||||||| |||| |||||| || ||| | | |||  ||||||| |||||||  || ||||||||    
T  39193924 tatgaagaaaaattaaccccccaaagccctcccctcccaatgtactctatttcttccacttgctacttccttttttc 39193848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 28416163 - 28416258
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||| ||| | |||||||||||||||| |||| ||||||| |||||| ||||||||| |||| |||||||||| ||||| |||||||||    
T  28416163 attaaatttgaacaatacgtataaaccctccaaaaccctcatccaatacaattttgtagttcccc-aaataaggagggttttatattttgaagaaaa 28416258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 31305777 - 31305872
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||| | | ||||||| |||| | |||||||| | ||| |||||||||    
T  31305777 attaaatttgaagaattcatataaaccctccaaaatccttctccaatacaattgtttcgttcccc-aaattaagagggttttacattttgaagaaaa 31305872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 227
Target Start/End: Complemental strand, 8228571 - 8228406
Alignment:
Q  61 tccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttctt 160  Q
    |||||||  ||||| |||||||||||| ||| ||||||||  ||||||||| ||||||||||||| |||| | || |  | ||||||| |||  ||||||    
T  8228571 tccaatacgattttttagttccccaaa-tgatgagggttttgtattatgaaaaaaagttaacccctcaaatcacttccatcccatttttctctatttctt 8228473  T
Q  161 caacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    | ||||||||||| |||||||||||||| | || || | ||||  | |||||||| |||||||||||    
T  8228472 ccacttgctcattccttttttctcaagcattcccctccattcctttccaaactcgcaaacaaagcct 8228406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 31149995 - 31149882
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||| | ||| || ||| ||||||||| ||||||||| | |||  ||||| |||||||    
T  31149995 atagaataaatttgaagaattcatataaaccctccaaaacgctcctgcgatacaactttttagttcccc-aaatgaggatgattttgtattaggaagaaa 31149897  T
Q  116 agttaaccccacaaa 130  Q
    | |||||||| ||||    
T  31149896 aattaaccccccaaa 31149882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 39778893 - 39778809
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatatt 106  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| || |||||| ||| ||||||||||| |||||    
T  39778893 attaaatttgaagaattcatataaaccatccaaaattctcctccaatacaatttttta-ttcccc-aaaggaggagggttttatatt 39778809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 116
Target Start/End: Original strand, 1839843 - 1839918
Alignment:
Q  41 taaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||| |||||| |||||||||||| ||||||  |||||||| ||||||||||||||| ||||| |||||||||    
T  1839843 taaaccccccaaaaccctcctccaatacaatttttaagttcccccaaatgaggagggttttatattttgaagaaaa 1839918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 6943458 - 6943517
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagt 79  Q
    |||||||||||||||||||||| |||||||||||| |||||||||||| |||||| ||||    
T  6943458 attaaatttgaagaattcatattaaccctccaaaaccctcctccaatacaattttttagt 6943517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 16424227 - 16424164
Alignment:
Q  20 attaaatttgaagaattcatataaaccctc-caaaatcctcctccaatataattttctagttcc 82  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||| |||||||    
T  16424227 attaaatttgaagaattcatataaaccctctcaaaatcctcctctaatacaattttttagttcc 16424164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 36837490 - 36837552
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttcc 82  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||| |||||| |||||||    
T  36837490 attaaatttgaagaattcttattaaccctccaaaaccctcctccaatacaattttttagttcc 36837552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 43007791 - 43007685
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||| ||||||||||||||||||          | ||||| |||||| ||||| |||||||||||||| ||||  |||||| ||||||    
T  43007791 atagattaaatttgaaaaattcatataaaccctcc----------ttcaatacaattttttagtttcccaaaatgaggagagttttgtattataaagaaa 43007702  T
Q  116 agttaaccccacaaaac 132  Q
    |||||||||| ||||||    
T  43007701 agttaaccccccaaaac 43007685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 130
Target Start/End: Original strand, 4873299 - 4873371
Alignment:
Q  58 tcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaa 130  Q
    |||||||||  |||| | ||||||||  ||||||||||||||| |||||||||||||||||||||||| ||||    
T  4873299 tcctccaatgcaattgtttagttccctcaaatgaggagggtttcatattatgaagaaaagttaaccccccaaa 4873371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 13258579 - 13258473
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||  ||||||||||||||||||||||||||||| ||||| || | || |||||| |||||||||  ||| ||||   |||  |||||||||||||    
T  13258579 atagattggatttgaagaattcatataaaccctccaaagtcctcttcgattacaattttttagttcccccgaattagga---ttttgtattatgaagaaa 13258483  T
Q  116 agttaacccc 125  Q
    | ||||||||    
T  13258482 aattaacccc 13258473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 12595406 - 12595370
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaa 52  Q
    |||||||||||||||||||||||||||||||||||||    
T  12595406 atagattaaatttgaagaattcatataaaccctccaa 12595370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 8228631 - 8228596
Alignment:
Q  21 ttaaatttgaagaattcatataaaccctccaaaatc 56  Q
    ||||||||||||||||||||||||||||||||||||    
T  8228631 ttaaatttgaagaattcatataaaccctccaaaatc 8228596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 122
Target Start/End: Original strand, 13369894 - 13370016
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaacc----------ctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtt 99  Q
    ||||||| |||||||||||||||||||||||||||||          |  |||||||||||||||||| |||||  ||||||||  |||||| || ||||    
T  13369894 aataatacagattaaatttgaagaattcatataaacctttcaaaaaacctcaaaatcctcctccaatagaatttgttagttccctcaaatgatgaaggtt 13369993  T
Q  100 taatattatgaagaaaagttaac 122  Q
    | |||||| ||||||| ||||||    
T  13369994 ttatattacgaagaaatgttaac 13370016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 214
Target Start/End: Original strand, 36837563 - 36837669
Alignment:
Q  107 atgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccct 206  Q
    ||||||||||||||||||| |||| ||||||||| | |||||||||  ||||||| ||||  | ||| |||||||||||| ||| || ||  ||||||||    
T  36837563 atgaagaaaagttaacccc-caaagccctcctctcctattttcctctatttcttccacttatttattccttttttctcaaaccttcccctctcttcccct 36837661  T
Q  207 tcaaactc 214  Q
     |||||||    
T  36837662 ccaaactc 36837669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 45308355 - 45308297
Alignment:
Q  27 ttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttcccca 85  Q
    |||||||||||||||||||| || ||||| |||||||||| |||||||  |||||||||    
T  45308355 ttgaagaattcatataaaccttctaaaattctcctccaatgtaatttttaagttcccca 45308297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 53
Target Start/End: Original strand, 1111123 - 1111160
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaa 53  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  1111123 atagattaaatttgaagaatttatataaaccctccaaa 1111160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 1840199 - 1840232
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctc 49  Q
    ||||||||||||||||||||||||||||||||||    
T  1840199 atagattaaatttgaagaattcatataaaccctc 1840232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 35616649 - 35616612
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    |||||||||||||||||||| |||||||||||||||||    
T  35616649 attaaatttgaagaattcatgtaaaccctccaaaatcc 35616612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 14 - 116
Target Start/End: Original strand, 40985060 - 40985172
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctc----------caaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaat 103  Q
    ||||| |||||||||||||||||||| |||||||||          ||||| |||||||||||| ||||||  |||||||| ||||||||||| |||  |    
T  40985060 atataaattaaatttgaagaattcatgtaaaccctccaaaacccctcaaaaccctcctccaatacaatttttgagttcccccaaatgaggaggattttgt 40985159  T
Q  104 attatgaagaaaa 116  Q
    |||||||| ||||    
T  40985160 attatgaataaaa 40985172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 6943554 - 6943638
Alignment:
Q  139 cttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaa 223  Q
    ||||||||||||||  ||||||| | |||||||||  ||||||| |||  || ||||| |||||| ||||||||||| |||||||    
T  6943554 cttccattttcctctatttcttccaattgctcattctttttttcccaaatcttcctctcccttcctcttcaaactcgcaaacaaa 6943638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 10589861 - 10589777
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaacccca 126  Q
    |||||| ||||||||||||||||||| |||||| ||||||  | ||||||| | | ||| ||||| ||||||||| | |||||||    
T  10589861 aaaccccccaaaatcctcctccaatacaattttttagttcttctaaatgagaatgattttatattttgaagaaaaataaacccca 10589777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 29584267 - 29584095
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||| |||||||||||||||||||||||||           |||||| | |||| |||||  || | |||||||||||||  |||||||| ||||    
T  29584267 atagattaattttgaagaattcatataaaccctccc----------ccaatacatttttttagttatcccatatgaggagggtttggtattatgatgaaa 29584178  T
Q  116 agttaaccccacaaaaccctcctcttcca-ttttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctac 198  Q
    |||||| |||||||| |||||| ||| || ||||||   |||| ||| ||||||||||| |||||||  |||| ||||| ||||    
T  29584177 agttaa-cccacaaagccctcccctttcatttttccctatttttttccacttgctcattcctttttttccaagtctccccctac 29584095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 34148567 - 34148632
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccc 83  Q
    ||||||| |||||||| ||||||||||| |||  ||||| |||||||||||||||||||  |||||||    
T  34148567 atagattgaatttgaaaaattcatataacccc--caaaaacctcctccaatataatttttgagttccc 34148632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 41455299 - 41455240
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||| |||||| ||||| |||||| |||||||||||| ||||| |||||||||    
T  41455299 cctcctccaatacaattttttagtttcccaaa-tgaggagggttttatattttgaagaaaa 41455240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 27085437 - 27085407
Alignment:
Q  20 attaaatttgaagaattcatataaaccctcc 50  Q
    |||||||||||||||||||||||||||||||    
T  27085437 attaaatttgaagaattcatataaaccctcc 27085407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 35856515 - 35856592
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatga 91  Q
    ||||||||||  |||||||||||||||||||||| | ||||| |||| ||||||  |||||| ||||||| | ||||||    
T  35856515 aatatagatttgatttgaagaattcatataaaccttgcaaaaccctcatccaat-caattttttagttcctctaaatga 35856592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Original strand, 1839812 - 1839841
Alignment:
Q  20 attaaatttgaagaattcatataaaccctc 49  Q
    ||||||||||||||||||||||||||||||    
T  1839812 attaaatttgaagaattcatataaaccctc 1839841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 23963064 - 23963031
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaa 53  Q
    ||||||||||||| ||||||||||||||||||||    
T  23963064 attaaatttgaaggattcatataaaccctccaaa 23963031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 31297330 - 31297371
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctcca 51  Q
    ||||| ||||||| |||||||| |||||||||||||||||||    
T  31297330 aataacatagattgaatttgaaaaattcatataaaccctcca 31297371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 100
Target Start/End: Complemental strand, 32158854 - 32158773
Alignment:
Q  20 attaaatttgaagaattcatataaaccct-ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggttt 100  Q
    ||||| ||| || |||||||||||||||| ||||||  || |||||||| ||| || ||||||||| ||||||| |||||||    
T  32158854 attaattttaaaaaattcatataaaccctcccaaaactcttctccaatacaatattttagttcccccaaatgagtagggttt 32158773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 74
Target Start/End: Complemental strand, 39405159 - 39405095
Alignment:
Q  10 aataatatagattaaa-tttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||||| |||||||| |||||| |||||||||||| ||| |||||| ||| ||||||||||||||    
T  39405159 aataataaagattaaaatttgaaaaattcatataaatccttcaaaat-ctcttccaatataatttt 39405095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 13865080 - 13865112
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccct 48  Q
    |||||||||||||||| ||||||||||||||||    
T  13865080 atagattaaatttgaaaaattcatataaaccct 13865112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 13949743 - 13949775
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaa 52  Q
    ||||||||||||||||||||||||||| |||||    
T  13949743 attaaatttgaagaattcatataaaccttccaa 13949775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 14641495 - 14641463
Alignment:
Q  11 ataatatagattaaatttgaagaattcatataa 43  Q
    |||| ||||||||||||||||||||||||||||    
T  14641495 ataacatagattaaatttgaagaattcatataa 14641463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 73
Target Start/End: Complemental strand, 20992750 - 20992690
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattt 73  Q
    |||||| ||||||||||||||||| ||| || ||||| |||||| || | |||||||||||    
T  20992750 aatataaattaaatttgaagaatttatacaatccctcaaaaatcttcattcaatataattt 20992690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 44
Target Start/End: Original strand, 23702468 - 23702496
Alignment:
Q  16 atagattaaatttgaagaattcatataaa 44  Q
    |||||||||||||||||||||||||||||    
T  23702468 atagattaaatttgaagaattcatataaa 23702496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 31297373 - 31297417
Alignment:
Q  43 aaccctccaaaatcctcctccaatataattttctagttccccaaa 87  Q
    ||||| |||||| |||||||||||| |||||| ||||||||||||    
T  31297373 aaccccccaaaaccctcctccaatacaattttttagttccccaaa 31297417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 44879634 - 44879598
Alignment:
Q  21 ttaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    |||||||| |||||||||| |||||||||||||||||    
T  44879634 ttaaatttaaagaattcatgtaaaccctccaaaatcc 44879598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 44880287 - 44880323
Alignment:
Q  21 ttaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    |||||||| |||||||||| |||||||||||||||||    
T  44880287 ttaaatttaaagaattcatgtaaaccctccaaaatcc 44880323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 7e-52; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 10438069 - 10437858
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||| |||| |||||||||||| |||||||||||| || ||| ||||||| | ||||||||||| |||  |||||| ||||||    
T  10438069 atagattaaatttgaagaattgatattaaccctccaaaaccctcctccaatacaactttttagttcctctaaatgaggaggattttgtattataaagaaa 10437970  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    |||||||||| ||||  ||||| || ||||||| |||  ||||||| ||||||||||| |||||||| ||||||| ||||| ||||||||| ||||||||    
T  10437969 agttaaccccccaaagacctcccctcccatttttctctatttcttccacttgctcattccttttttcccaagccttcctctcccttcccctccaaactcg 10437870  T
Q  216 gaaacaaagcct 227  Q
     |||||||||||    
T  10437869 caaacaaagcct 10437858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 38568365 - 38568544
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  38568365 atagattaaatttgaagaattcatataaaccccccaaaaccctcctccaatataattttttagttcccccaaatgaggagggtttagtattatgaagaaa 38568464  T
Q  116 agttaaccccacaaa-----accctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    |||||||||| ||||      |||||| || |||||||||||  ||||||  ||||||||||| |||||||| |||||||    
T  38568465 agttaaccccccaaagccctcccctcccctcccattttcctctatttctttcacttgctcattccttttttcccaagcct 38568544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 5772722 - 5772930
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||| |||||| || |||| | |||||||||||||||  |||||||||||||||||    
T  5772722 attaaatttgaagaattcttattaaccctccaaaaccctcctccaatacaattttttaattcctccaaatgaggagggttttgtattatgaagaaaagtt 5772821  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaa 219  Q
    |||||| |||| ||||||||| |||||||| ||  ||||||| |||||||||||  |||||||  |||||| || || ||||||||| |||||||  |||    
T  5772822 aacccc-caaagccctcctctcccattttcttctatttcttccacttgctcattctttttttcctaagccttcccctcccttcccctccaaactcttaaa 5772920  T
Q  220 caaagcctta 229  Q
    ||||||||||    
T  5772921 caaagcctta 5772930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 14570039 - 14570212
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| || |||||||||||||||| |||||| |||||||    
T  14570039 tagattaaatttgaagaattcatataaaccctccaaaaccctactccaatataattttttagttctcccaaatgaggagggtttagtattataaagaaaa 14570138  T
Q  117 gttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    ||||||||  |||| |||||| || |||||||||||  |||| || ||||| ||||| |||||||| |||||||    
T  14570139 gttaaccctccaaagccctcccctcccattttcctctatttcgtccacttggtcattccttttttcccaagcct 14570212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 229
Target Start/End: Original strand, 35683465 - 35683684
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcc----------tccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    |||||||||||||||||| ||| ||||||||||||||| ||          ||||||| |||||| ||||||| | |||||||||||||||  |||||||    
T  35683465 attaaatttgaagaattcttattaaccctccaaaatcccccaaatctcacctccaatacaattttttagttcctccaaatgaggagggttttgtattatg 35683564  T
Q  110 aagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttca 209  Q
    |||||||||||||||| | || ||||||||| |||||||| ||  ||||||| ||||||||||| ||||||||  || ||| || || ||||||||||||    
T  35683565 aagaaaagttaaccccccgaagccctcctctcccattttcttctatttcttccacttgctcattccttttttcctaaaccttcccctcccttccccttca 35683664  T
Q  210 aactcggaaacaaagcctta 229  Q
    |||||| |||||||||||||    
T  35683665 aactcgcaaacaaagcctta 35683684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 10843123 - 10842954
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| ||||| |||||| | |||| ||||| |||||| ||||||| | |||||||||||||||  |||||||||||||||||    
T  10843123 attaaatttgaagaattcttattaaccccccaaaaccgtccttcaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtt 10843024  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    |||||| |||| ||||||||| |||||||||||  ||||||| |||| || ||| ||||||||||||||||    
T  10843023 aacccc-caaagccctcctctcccattttcctctatttcttccacttacttattccttttttctcaagcct 10842954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 39649628 - 39649442
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| ||||||||||||||||||| |||||| ||||||| | |||||||||||||||  ||| ||||||||||||||||||| |||| |||||||||     
T  39649628 aaaccccccaaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaaccccccaaagccctcctctc 39649529  T
Q  142 ccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    |||||||| |   ||||||| ||||||||||| | ||||||| |||||||  | || |||| |||| |||||||| |||||||||||    
T  39649528 ccattttcatttatttcttccacttgctcattcctttttttcccaagcctttccctcccttgccctccaaactcgcaaacaaagcct 39649442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 10 - 227
Target Start/End: Original strand, 18675705 - 18675921
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| || ||||||||| ||||||| ||| |||| ||||| |    
T  18675705 aataacatagattaaattcgaagaattcatataaaccctccaaaacccttctccaatataatcttttagttcccc-aaatgagaaggatttagtattacg 18675803  T
Q  110 aagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttca 209  Q
    ||||||| |||||| | ||||| ||||| |  || ||||||||  ||||||| ||||| ||||| |||||||| ||||||| |  || ||||||| | ||    
T  18675804 aagaaaatttaacctctcaaaatcctccccgcccgttttcctctatttcttccacttggtcattccttttttcccaagccttcgcctcccttcccttcca 18675903  T
Q  210 aactcggaaacaaagcct 227  Q
    |||||   ||||||||||    
T  18675904 aactcaccaacaaagcct 18675921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 113
Target Start/End: Original strand, 19389816 - 19389912
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaaga 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |||  |||||||||||    
T  19389816 atagattaaatttgaagaattcatgtaaaccctccaaaatcctcctccaatacaattttttagttcccc-aaatgaggaggattttgtattatgaaga 19389912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 9096401 - 9096293
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |  |||||||| |||| |||| | |||  ||||||||||||||    
T  9096401 tagattgaatttgaagaattcatataaaccctccaaaatcctcctccaatacaattgttgagttcccccaaattaggaagattttgtattatgaagaaaa 9096302  T
Q  117 gttaacccc 125  Q
    || ||||||    
T  9096301 gtgaacccc 9096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 225
Target Start/End: Original strand, 10955722 - 10955900
Alignment:
Q  50 caaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctc-ttccatttt 148  Q
    |||||||||||||||||| ||| || ||||||||| |||||||||||||||  |||||||| |||||||||||||| |||| ||| |||| |||||||||    
T  10955722 caaaatcctcctccaatacaatcttttagttcccccaaatgaggagggttttgtattatgatgaaaagttaaccccccaaagccc-cctctttccatttt 10955820  T
Q  149 cctcgttttcttcaacttgctcatttctttt--ttc-tcaagcctccctctaccttccccttcaaactcggaaacaaagc 225  Q
     |||  ||||||| |||||||||||| ||||  ||| |||||||| |  || ||||||||| |||||||| ||| |||||    
T  10955821 tctctatttcttccacttgctcattttttttccttcttcaagccttcaccttccttcccctccaaactcgcaaataaagc 10955900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 20 - 231
Target Start/End: Original strand, 35708754 - 35708966
Alignment:
Q  20 attaaatttgaagaattcatataaaccctcc-aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    ||||||||||||||||||||||||||| ||| |||| ||||||||| || |||||| ||||||||  ||||||||||| ||| ||| | |||||||||      
T  35708754 attaaatttgaagaattcatataaaccttcccaaaaccctcctccagtacaattttttagttccctcaaatgaggaggattttatactttgaagaaaaac 35708853  T
Q  119 taaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctc--aagcctccctctaccttccccttcaaactcgg 216  Q
    ||||||| |||| ||| |  |||||| | |||||  ||||||| |||| ||| || ||||||| ||  || |||||| || ||||||||| |||||||      
T  35708854 taaccccccaaagccc-ctccttccaatgtcctcaatttcttccacttactccttccttttttttccaaaccctccc-ctcccttcccctccaaactcac 35708951  T
Q  217 aaacaaagccttaga 231  Q
    |||||||||||||||    
T  35708952 aaacaaagccttaga 35708966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 151
Target Start/End: Complemental strand, 13569413 - 13569312
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    |||||| ||||||||||||||||||| ||||||| | |||||||||   |||  ||||||||||||||||||||||| |||||||||||||| |||||||    
T  13569413 ccaaaaccctcctccaatataattttgtagttcctccaaatgaggaaaattttgtattatgaagaaaagttaacccc-caaaaccctcctctcccatttt 13569315  T
Q  149 cct 151  Q
    |||    
T  13569314 cct 13569312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 3676503 - 3676576
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaat 89  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| || |||||| ||||    
T  3676503 atagattaaatttgaagaattcatataaacccttcaaaatcctcctccaatacaattttttatttcccctaaat 3676576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 13 - 140
Target Start/End: Complemental strand, 37909087 - 37908960
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaag 112  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||| || |||  |||| |||  ||| |||  | |||  ||||||||||    
T  37909087 aatatagattgaatttgaagaattcatataaaccctccaaaaccctcctccaatacaacttttgagtttccccgaattaggttgattttgtattatgaag 37908988  T
Q  113 aaaagttaaccccacaaaaccctcctct 140  Q
    |||| | |||||| |||| |||||||||    
T  37908987 aaaattaaaccccccaaagccctcctct 37908960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 9684780 - 9684879
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||| ||||||||||||||| ||||||| |||||| | |||| ||||  |||||| || |||||| |||||||||||||||  ||||||||||||||    
T  9684780 tagattagatttgaagaattcatgtaaaccccccaaaaccttccttcaatgcaattttttaattcccccaaatgaggagggttttgtattatgaagaaaa 9684879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 3938123 - 3938228
Alignment:
Q  20 attaaatttgaagaattcatataaaccctcc---------aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatga 110  Q
    |||||||||||||||||||||||||| ||||         |||||||| |||||||| |||||| ||||||||||||||||| ||||||| |||||  ||    
T  3938123 attaaatttgaagaattcatataaactctcccaaactcccaaaatcctactccaatacaattttttagttccccaaaatgagcagggttttatatttcga 3938222  T
Q  111 agaaaa 116  Q
    ||||||    
T  3938223 agaaaa 3938228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 15974433 - 15974257
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    ||||||||||||| |||||||| |||||||||||||||| ||          |||||||  | |||||| |||||| |  |||||||||| || || |||    
T  15974433 atagattaaatttaaagaattcgtataaaccctccaaaaacccccaaaactctcctccacaacaattttttagttctctcaaatgaggagagtatagtat 15974334  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||||||||||||||||  |||| || | | || ||||||| |||  ||||||| ||||||||| ||||||||||    
T  15974333 tatgaagaaaagttaaccctccaaagcctttccctcccatttttctctatttcttccacttgctcaattcttttttc 15974257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 207
Target Start/End: Original strand, 43496873 - 43497045
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    ||||||||||||||||||||||||||||||          |||||||| ||||||  |||||||| ||||||| || ||||  |||||| ||||||| ||    
T  43496873 attaaatttgaagaattcatataaaccctc----------ctccaatacaatttttaagttcccc-aaatgagcagagttttgtattattaagaaaaatt 43496961  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccctt 207  Q
    |||||| |||| ||||||||| ||||||||||   ||||||  ||||||| | ||||||||||  |||||||||||  ||||||||||    
T  43496962 aacccc-caaagccctcctctcccattttcctttatttctttcacttgctga-ttcttttttccaaagcctccctc--ccttcccctt 43497045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 51 - 179
Target Start/End: Complemental strand, 8944094 - 8943967
Alignment:
Q  51 aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcc 150  Q
    |||| |||| ||| ||| |||||| ||||||| | ||||||||| |||||| ||||||||| ||| ||||||||| |||| | |||| |||| |||||||    
T  8944094 aaaaccctcatccgatacaatttt-tagttcctccaaatgaggaaggtttagtattatgaaaaaaggttaacccctcaaagctctccccttctattttcc 8943996  T
Q  151 tcgttttcttcaacttgctcatttctttt 179  Q
    ||  ||||||  ||||||||||| |||||    
T  8943995 tctatttctttcacttgctcattcctttt 8943967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 17668122 - 17668166
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  17668122 atagattaaatttgaagaattcatgtaaaccctccaaaatcctcc 17668166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 227
Target Start/End: Complemental strand, 18671071 - 18670905
Alignment:
Q  60 ctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttc-cattttcctcgttttc 158  Q
    |||||||| |||||| ||||||| |||| |||  | | |||| ||||||||||||| ||||||  | ||||||||| | |||| ||||||||||  ||||    
T  18671071 ctccaatacaattttttagttcctcaaa-tgaaaaagatttagtattatgaagaaacgttaacttctcaaaacccttc-cttcgcattttcctctatttc 18670974  T
Q  159 ttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    ||| ||||| ||||| ||||||||  |||||| || || ||||||||| |||||||  |||||||||||    
T  18670973 ttcgacttgatcattccttttttccgaagccttcccctcccttcccctccaaactcacaaacaaagcct 18670905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 80
Target Start/End: Original strand, 32125269 - 32125325
Alignment:
Q  24 aatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagtt 80  Q
    ||||||||||||||||| |||||||| ||||||||||||||||| |||||| |||||    
T  32125269 aatttgaagaattcatacaaaccctctaaaatcctcctccaatacaattttttagtt 32125325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 136
Target Start/End: Complemental strand, 29709589 - 29709486
Alignment:
Q  33 aattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaac 132  Q
    ||||||||||||||  ||||||||||||||| ||| |||||| |||||||   ||||||||||  |||  ||||||| |||||||| |||||| |||||     
T  29709589 aattcatataaacctaccaaaatcctcctccgatacaattttttagttccttcaaatgaggagaattttgtattatggagaaaagtgaacccctcaaaat 29709490  T
Q  133 cctc 136  Q
    ||||    
T  29709489 cctc 29709486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 41923251 - 41923172
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggag 95  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| || | || |||| | ||||||| ||||||| ||||    
T  41923251 atagattaaatttgaagaattcatataaacccttcaaaattctcttctagtacaattgtttagttcctcaaaatggggag 41923172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 82
Target Start/End: Complemental strand, 12150665 - 12150599
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttcc 82  Q
    ||||||| |||||| |||||| || ||||||| ||||||||||||||||||| |||||| |||||||    
T  12150665 atagattgaatttggagaatttatctaaacccgccaaaatcctcctccaatacaattttttagttcc 12150599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 3925779 - 3925883
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||| |||||||||||||| ||||||| | |||||||  ||| ||||||| |||||| ||||||||| ||||||||||  ||  |||| |||||||||    
T  3925779 atagatcaaatttgaagaatttatataaatcgtccaaaactctcatccaatacaattttttagttcccc-aaatgaggagaattctatatcatgaagaaa 3925877  T
Q  116 agttaa 121  Q
    | ||||    
T  3925878 aattaa 3925883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 13293974 - 13294030
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    |||||||| ||||||||| |||||||||||||||| | |||||||||||| ||||||    
T  13293974 agattaaacttgaagaatacatataaaccctccaagaccctcctccaatacaatttt 13294030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 21 - 125
Target Start/End: Complemental strand, 6491272 - 6491158
Alignment:
Q  21 ttaaatttgaagaattcatataaaccctcc----------aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatga 110  Q
    ||||||||||||||||||||||||||||||          |||||| |||||||||| ||||||  |||||||| ||||||||| | |||  ||||||||    
T  6491272 ttaaatttgaagaattcatataaaccctccgaaacaccccaaaatcttcctccaatacaatttttgagttcccccaaatgaggaagattttgtattatga 6491173  T
Q  111 agaaaagttaacccc 125  Q
    |||||| | ||||||    
T  6491172 agaaaaatgaacccc 6491158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 13450558 - 13450511
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaata 67  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  13450558 attaattttgaagagttcatataaatcctccaaaatcctcctccaata 13450511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 21916295 - 21916405
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||||||||||| |||||||||||| ||||   |  |   |||||| ||| ||||||||| |||| ||||||||||  ||| ||||||||||    
T  21916295 tagattaaatttgaagaatttatataaaccctcaaaaacattaat---atataactttttagttcccccaaataaggagggttttgtatcatgaagaaaa 21916391  T
Q  117 gttaaccccacaaa 130  Q
     |||||||| ||||    
T  21916392 attaacccctcaaa 21916405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 29799736 - 29799630
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaac-cctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattat 108  Q
    ||||| ||| ||||||||||||||||| |||||||| | ||||||| |||| ||||||| | |||| ||||||||| | || | |||||||| ||||| |    
T  29799736 aataacatatattaaatttgaagaatttatataaactcttccaaaaccctcatccaatacagttttttagttcccc-acataaagagggttttatatttt 29799638  T
Q  109 gaagaaaa 116  Q
    ||||||||    
T  29799637 gaagaaaa 29799630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 187
Target Start/End: Complemental strand, 39027790 - 39027653
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    ||||||| |||||  ||||||||||| ||||| |||||||||| |||  |||  |||||  |||||||||||||| | ||||| ||||| || | |||||    
T  39027790 ccaaaattctcctttaatataattttttagtttcccaaaatgaagagatttttgtattaccaagaaaagttaacctcccaaaatcctcccctcctatttt 39027691  T
Q  149 cctcgttttcttcaacttgctcatttcttttttctcaag 187  Q
     ||| | |||||| | |||||||||  ||||||||||||    
T  39027690 tctc-tattcttccatttgctcattcattttttctcaag 39027653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 9621926 - 9621959
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaacc 46  Q
    ||||||||||||||||||||||||||||||||||    
T  9621926 aatatagattaaatttgaagaattcatataaacc 9621959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 33682464 - 33682432
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctc 49  Q
    |||||||||||||||||||||||||||||||||    
T  33682464 tagattaaatttgaagaattcatataaaccctc 33682432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 2561186 - 2561080
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||||||||| | ||||| | |||||| || | |||||  ||||||||||||| | ||||||| | | |||  ||||| |||||||    
T  2561186 atagattaaatttgaagaattcatgtgaaccc-caaaaatcttcattcaatactattttctagttcctccaaatgagaatgattttgtattacgaagaaa 2561088  T
Q  116 agttaacc 123  Q
    ||| ||||    
T  2561087 agtgaacc 2561080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 31535302 - 31535399
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||| |||||| |||| ||| |||||||||||||||| |||  || || ||||||  |||||||| |||| ||||||||||  ||||||||||||||    
T  31535302 tagattatatttgatgaatgcatgtaaaccctccaaaatcatccctcactacaatttttgagttcccc-aaataaggagggttt-gtattatgaagaaaa 31535399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 1935099 - 1935133
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||||||||||||||| |||||||||||||||    
T  1935099 attaaatttgaagaattcacataaaccctccaaaa 1935133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 32750722 - 32750644
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagg 96  Q
    ||||| |||||||| ||||||||||||| |||| ||| ||| | |||||| || ||| ||||||||| | |||||||||    
T  32750722 agattgaatttgaaaaattcatataaacactcctaaacccttccccaataaaaatttttagttcccccacatgaggagg 32750644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 38120177 - 38120211
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctcca 51  Q
    ||||||||||||||| |||||||||||||||||||    
T  38120177 tagattaaatttgaaaaattcatataaaccctcca 38120211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 1658276 - 1658235
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctcca 51  Q
    ||||| ||||||| |||||||| |||||||||||||||||||    
T  1658276 aataacatagattgaatttgaaaaattcatataaaccctcca 1658235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 5696568 - 5696613
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcct 61  Q
    ||||||| |||| |||||| | ||||||||||||||||||||||||    
T  5696568 atagattgaattcgaagaaattatataaaccctccaaaatcctcct 5696613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 6373178 - 6373123
Alignment:
Q  58 tcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaa 114  Q
    ||||| |||| |||||| |||||||||||| |||||||||||| ||||| |||||||    
T  6373178 tcctcgaatacaattttttagttccccaaa-tgaggagggttttatattttgaagaa 6373123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 12097002 - 12096958
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||||||||| ||||||||||||||||  ||||| |||||||    
T  12097002 aataatatagattgaatttgaagaattcatgcaaaccatccaaaa 12096958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 5e-50; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 29114235 - 29114443
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||| |||||| ||||||| | |||||||||||||||  |||||||||||||||||    
T  29114235 attaaatttgaagaattcttattaaccctccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtt 29114334  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcctccctctaccttccccttcaaactcggaa 218  Q
    |||||| |||| ||||||||| |||||||||||  ||||||| |||| || ||| | ||||||| ||||||| || || ||||||| | |||||||| ||    
T  29114335 aaccccccaaagccctcctctcccattttcctctatttcttccacttacttattcctttttttcccaagccttcccctcccttcccttccaaactcgcaa 29114434  T
Q  219 acaaagcct 227  Q
    |||||||||    
T  29114435 acaaagcct 29114443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 49668102 - 49668310
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||| || ||||||| ||||||| |||||| |||||||||||| |||||| ||||||||  ||||||||||||||||||||||||||||||    
T  49668102 atagattaaatttaaaaaattcatgtaaaccccccaaaaccctcctccaatacaattttttagttcccttaaatgaggagggtttaatattatgaagaaa 49668201  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    |||||||| | |||| || | | || ||||||| |||  ||||||| ||||||||||| |||||||||||| ||| || ||  ||||| || ||||||||    
T  49668202 agttaacctc-caaagccgtaccctcccatttttctctatttcttccacttgctcattccttttttctcaaaccttcccctcacttcctctccaaactcg 49668300  T
Q  216 gaaacaaagc 225  Q
     |||||||||    
T  49668301 caaacaaagc 49668310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 50 - 225
Target Start/End: Original strand, 38136866 - 38137041
Alignment:
Q  50 caaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttc 149  Q
    ||||| |||||||||||| |||||| ||||||| | ||||||| |||||||  ||||||||| ||||||||||||| |||| ||||||||||||||||||    
T  38136866 caaaaccctcctccaatacaattttttagttcctccaaatgagaagggttttgtattatgaaaaaaagttaaccccccaaagccctcctcttccattttc 38136965  T
Q  150 ctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagc 225  Q
    |||  ||||||| |||| || ||| |||||||||||||||| || || ||||||||| |||||||| |||||||||    
T  38136966 ctctatttcttccacttacttattccttttttctcaagccttcccctcccttcccctccaaactcgcaaacaaagc 38137041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 12708858 - 12709045
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| |||||||||     
T  12708858 aaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctc 12708957  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcctta 229  Q
    |||||||||||  ||||||| |||| || |||  ||||||| ||||||| || || |  |||||| |||||||| |||||||||||||    
T  12708958 ccattttcctctatttcttccacttacttattctttttttcccaagccttcccctccaatcccctccaaactcgcaaacaaagcctta 12709045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 45823634 - 45823427
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||||||||||| |||||||| |||||| ||||| ||||||  |||| ||| |||||||||| ||||  |||||||||||||||||    
T  45823634 attaaatttgaagaattcatataaactctccaaaaccctccttcaatacaatttttaagtttccccaaatgaggagagttttgtattatgaagaaaagtt 45823535  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaa 219  Q
    |||||   ||||||||   || |||||||||||  ||||||| ||||||||| | |||||||| ||||| | || || ||||| | | |||||||| |||    
T  45823534 aaccctctaaaacccttacctcccattttcctctatttcttccacttgctcactccttttttcccaagcattcccctcccttctcttccaaactcgcaaa 45823435  T
Q  220 caaagcct 227  Q
    ||||||||    
T  45823434 caaagcct 45823427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 49 - 230
Target Start/End: Complemental strand, 33500569 - 33500389
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    |||||| ||||| |||||| | |||| ||||||| | |||||||||||||||  | |||||||| ||||||||| || |||| ||||||||| |||||||    
T  33500569 ccaaaaccctcc-ccaatacatttttttagttcctccaaatgaggagggttttgtcttatgaaggaaagttaactcctcaaagccctcctctcccatttt 33500471  T
Q  149 cctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttag 230  Q
    ||||  ||||||| ||||||||||| |||||||||||||||| || || ||||||| | |||||||| ||||||||||||||    
T  33500470 cctctatttcttccacttgctcattccttttttctcaagccttcccctcccttcccttccaaactcgcaaacaaagccttag 33500389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 56 - 225
Target Start/End: Complemental strand, 16318660 - 16318491
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgtt 155  Q
    |||||||||||| |||||| ||||||| | |||||||||||||||  || ||||||||||||||||||||  ||| ||||||||| |||||||| ||  |    
T  16318660 cctcctccaatacaattttttagttcctccaaatgaggagggttttgtaatatgaagaaaagttaacccctgaaagccctcctctcccattttcttctat 16318561  T
Q  156 ttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagc 225  Q
    |||||| ||||||||||| ||||||||  |||||| || || |||||||||  ||||||| |||||||||    
T  16318560 ttcttccacttgctcattccttttttcctaagccttcccctcccttcccctcaaaactcgcaaacaaagc 16318491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 226
Target Start/End: Original strand, 30198803 - 30198979
Alignment:
Q  50 caaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttc 149  Q
    ||||| |||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| ||||||||| | ||||||    
T  30198803 caaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcctattttc 30198902  T
Q  150 ctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcc 226  Q
    |||  ||||||| |||| || ||| ||||||| ||||| || || || | |||||||  ||||||| ||||||||||    
T  30198903 ctctatttcttccacttacttattccttttttttcaagtcttcccctccattcccctctaaactcgcaaacaaagcc 30198979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 51 - 187
Target Start/End: Complemental strand, 45971608 - 45971474
Alignment:
Q  51 aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcc 150  Q
    ||||||||||||||||| |||||| ||||||||| |||||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||  ||||||||    
T  45971608 aaaatcctcctccaatacaattttttagttcccccaaatgagg-gggtttagtattatgaagaaaagttaacccc-caaaaccctcccctctcattttcc 45971511  T
Q  151 tcgttttcttcaacttgctcatttcttttttctcaag 187  Q
    ||  ||||||| ||||||||||| |||||||| ||||    
T  45971510 tctatttcttccacttgctcattccttttttcccaag 45971474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 46176925 - 46177140
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||| ||||||||||||||| |||||| |||||||||||| || ||| ||||||| | |||||||||||||||  |||||| ||||||    
T  46176925 atagattaaatttgaaaaattcatataaaccccccaaaaccctcctccaatacaactttttagttcctccaaatgaggagggttttgtattattaagaaa 46177024  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    | |||||||| ||||||||||| || ||| | | |||  ||||||| ||||| || ||  |||||||  || ||  || || |||| |||| |||||||     
T  46177025 aattaaccccccaaaaccctcccctcccaatgtactctatttcttccacttgttccttctttttttccaaaaccctcccctccctttccctccaaactca 46177124  T
Q  216 gaaacaaagccttaga 231  Q
     |||||||||||||||    
T  46177125 caaacaaagccttaga 46177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 223
Target Start/End: Original strand, 28175496 - 28175669
Alignment:
Q  50 caaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttc 149  Q
    ||||| |||||||| ||| |||||| ||||||| | ||||||||||| |||  ||||||||||||||||||||| | |||| ||||||||| ||||||||    
T  28175496 caaaaccctcctcctatacaattttttagttcctccaaatgaggaggattttgtattatgaagaaaagttaacctcccaaagccctcctctcccattttc 28175595  T
Q  150 ctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaa 223  Q
    |||  ||||||| |||| || ||| |||||||| ||||||| || || |||||| || |||||||| |||||||    
T  28175596 ctctatttcttccacttacttattccttttttcccaagccttcccctcccttcctctccaaactcgcaaacaaa 28175669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 49 - 232
Target Start/End: Original strand, 41709150 - 41709331
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    ||||||||||| ||||||  || ||| |||||||||| ||||| ||||||||||||||| ||||||||||||||||| |||||| ||||  |  ||||||    
T  41709150 ccaaaatcctc-tccaatgcaaatttttagttccccagaatgaagagggtttaatattacgaagaaaagttaacccc-caaaactctcccatctcatttt 41709247  T
Q  149 cctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttagat 232  Q
    ||||  ||||||| |||||||| || |||||||| ||||||| || ||  |||||||| |||||||| | ||||| ||||||||    
T  41709248 cctctatttcttccacttgctcgttccttttttcccaagccttcccctctcttcccctgcaaactcgcagacaaaaccttagat 41709331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 16 - 223
Target Start/End: Complemental strand, 55509970 - 55509764
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||| || |||| |||  |||||| ||||||| | ||||||  |  ||||  |||||||||||||    
T  55509970 atagattaaatttgaagaattcatataaaccctccaaaacccccctcaaatgcaattttttagttcctccaaatgaaaaatgttttgtattatgaagaaa 55509871  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    |||||||||| |||| | |||| || ||||||| ||   ||||||| |||||||||||  ||||||| | ||||| |||||  ||| |||| |||||| |    
T  55509870 agttaacccc-caaagctctcccctcccatttttctttatttcttccacttgctcattcattttttcccgagccttcctctctctttccctccaaacttg 55509772  T
Q  216 gaaacaaa 223  Q
     |||||||    
T  55509771 caaacaaa 55509764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 22 - 137
Target Start/End: Complemental strand, 35959273 - 35959158
Alignment:
Q  22 taaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaa 121  Q
    ||||||||||||||| |||||||||| ||||||  ||||||||||| || ||| ||||||||| |||||||||||||||  |||||||||||||| ||||    
T  35959273 taaatttgaagaatttatataaaccccccaaaacgctcctccaatacaactttttagttcccccaaatgaggagggttttgtattatgaagaaaaattaa 35959174  T
Q  122 ccccacaaaaccctcc 137  Q
     ||| |||| ||||||    
T  35959173 acccccaaagccctcc 35959158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 169
Target Start/End: Complemental strand, 368146 - 368001
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||||||| ||||| |||||| |||||| ||||||||||||  || ||||| |||||||||||||||  |||||||||||||| ||    
T  368146 attaaatttgaagaattcatatgaaccc-ccaaaaccctccttcaatataattttg-agctcccccaaatgaggagggttttgtattatgaagaaaaatt 368049  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgct 169  Q
    |||||  |||| |||| |||| | |||||||||  ||||||| |||||||    
T  368048 aaccc--caaagcccttctctcctattttcctctatttcttccacttgct 368001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 47063771 - 47063659
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    ||||||||||||||||||| ||||||||||  |||||||| ||||||| |||||| ||||||||| ||||||||||||||| ||||| | ||||||| |     
T  47063771 attaaatttgaagaattcacataaaccctctcaaatcctcttccaatacaattttttagttcccc-aaatgaggagggttttatattttaaagaaaaata 47063673  T
Q  120 aaccccacaaaacc 133  Q
    | |||| |||||||    
T  47063672 agccccccaaaacc 47063659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 49936595 - 49936477
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||| ||||||||||||||||||||||||| |  ||||  ||||||||| |||||| ||||||||| |||| |||||| |||  |||||||||||||    
T  49936595 atagattgaatttgaagaattcatataaacccttc-taatc--cctccaatacaattttttagttcccccaaattaggaggattttgtattatgaagaaa 49936499  T
Q  116 agttaaccccacaaaaccctcc 137  Q
    ||| ||| || |||||||||||    
T  49936498 agtgaacaccccaaaaccctcc 49936477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 18 - 137
Target Start/End: Original strand, 8828200 - 8828316
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaag 117  Q
    ||||||||||| |||||||||||||||||  || ||||||||||||| |||||||||  |||||| | |||||||||| ||||  ||||||||||||||     
T  8828200 agattaaatttaaagaattcatataaacc--cccaaatcctcctccattataatttttcagttcctc-aaatgaggagagttttgtattatgaagaaaat 8828296  T
Q  118 ttaaccccacaaaaccctcc 137  Q
    | ||| || |||||||||||    
T  8828297 taaactccccaaaaccctcc 8828316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 13984966 - 13985062
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||| |||||| ||||||||| ||||||||| |||||||||||| |||||| ||||||| | |||||| |||||||| ||||| | |||||||    
T  13984966 attaaattagaagaactcatataaatcctccaaaaccctcctccaatacaattttttagttccactaaatgaagagggttttatattttaaagaaaa 13985062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 48417606 - 48417671
Alignment:
Q  24 aatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaat 89  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||||  |||||||| ||||    
T  48417606 aatttgaagaattcatatagaccctccaaaatcctcctccaatacaatttttgagttcccccaaat 48417671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 52636774 - 52636678
Alignment:
Q  86 aaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    ||||||||||||||| ||||||||||||||| |||||||| |||| ||||| ||||||| | | |||  ||||||| ||||||||| | ||||||||    
T  52636774 aaatgaggagggttttatattatgaagaaaaattaaccccccaaagccctcatcttccaatgtactctatttcttccacttgctcagtccttttttc 52636678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 34236511 - 34236570
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattt 73  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||||| |||||||||||    
T  34236511 atatagattaaatttgaaaaattcatgtaaaccatccaaaatcctccttcaatataattt 34236570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 42650686 - 42650619
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||| |||||||||||| |||||| ||||||||| ||||||||||||||| ||||| |||||||||    
T  42650686 ccaaaaccctcctccaatacaattttttagttcccccaaatgaggagggttttatattttgaagaaaa 42650619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 51974410 - 51974304
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||| |||||||  ||| || || ||||||||||| ||||| |||||  ||||||||| |||||| |||| |||  |||||||||||||    
T  51974410 atagattaaatttgatgaattcacgtaacccttcaaaaatcctccttcaatacaatttgttagttcccc-aaatgaagaggattttgtattatgaagaaa 51974312  T
Q  116 agttaacc 123  Q
    ||||||||    
T  51974311 agttaacc 51974304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 9021026 - 9020955
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaa 88  Q
    |||||||||||||||||||||||  ||||| ||||||| |||| ||||||| ||||||  ||||||||||||    
T  9021026 tagattaaatttgaagaattcatgcaaaccttccaaaaccctcatccaatacaatttttgagttccccaaaa 9020955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 21443121 - 21443006
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaacc----------ctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtt 99  Q
    ||||||||| |||||||||||||||||||||||||||          ||||||||  || ||| ||||||||||| ||||||| | ||||||||||||||    
T  21443121 aataatatatattaaatttgaagaattcatataaacctttctaaactctccaaaactcttctctaatataattttttagttcctc-aaatgaggagggtt 21443023  T
Q  100 taatattatgaagaaaa 116  Q
    | ||||| |||||||||    
T  21443022 ttatattttgaagaaaa 21443006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 23708229 - 23708156
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaat 89  Q
    |||||||  ||||||| ||||||||||||||||||| |||||||| |||||| ||||||  |||||||| ||||    
T  23708229 atagattggatttgaaaaattcatataaaccctccataatcctcccccaatacaatttttgagttcccccaaat 23708156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 16422933 - 16422795
Alignment:
Q  84 caaaatgaggagggtttaatattatga-agaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    ||||||||||| |||||| |||||||| |||||| ||||||| |||||  ||||| |||||||||||||   ||||||| | ||||||| |||||||||     
T  16422933 caaaatgaggaaggtttagtattatgatagaaaaattaaccc-acaaagtcctccccttccattttcctttatttcttccagttgctca-ttcttttttt 16422836  T
Q  183 tcaagcctccctctaccttccccttcaaactcggaaacaaa 223  Q
     ||||| | || || ||||||||| |||||||  |||||||    
T  16422835 ccaagctttcccctcccttcccctccaaactcacaaacaaa 16422795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 28880080 - 28880020
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagtt 80  Q
    ||||||||||||||||||||||||| |||||||||||||| | ||||| ||| || |||||    
T  28880080 attaaatttgaagaattcatataaatcctccaaaatcctcattcaatacaatattttagtt 28880020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 31428894 - 31428810
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggttt 100  Q
    ||||||||||||  |||||||||| |||| ||||||||| | || ||||||| |||||| || |||||| |||||| ||||||||    
T  31428894 atagattaaattaaaagaattcatgtaaatcctccaaaaccatcttccaatacaattttttaattcccccaaatgaagagggttt 31428810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 50494646 - 50494770
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaat----ataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||  ||||| |||| |  |||    | |||||| ||||| ||   ||||||||||||||  | |||||||||||    
T  50494646 attaaatttgaagaattcatataaacccctcaaaaccctcatttaattaatacaattttttagtttccttgaatgaggagggttttgtgttatgaagaaa 50494745  T
Q  116 agttaaccccacaaaaccctcctctt 141  Q
    | |||||||| |||||||||||||||    
T  50494746 acttaacccc-caaaaccctcctctt 50494770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 24682985 - 24683068
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggttt 100  Q
    |||||||||||||||||||||||  |||||||| |||| ||||||| |||| ||||||  || ||| | ||||||| |||||||    
T  24682985 tagattaaatttgaagaattcatgcaaaccctctaaaaccctcctcaaatacaatttttgagctcctccaaatgagtagggttt 24683068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 84
Target Start/End: Complemental strand, 48620378 - 48620312
Alignment:
Q  20 attaaatttgaagaattcatataaaccctcc--aaaatcctcctccaatataattttctagttcccc 84  Q
    |||||||||||||||||||||||| ||| ||  |||| |||||||||||| |||||| |||||||||    
T  48620378 attaaatttgaagaattcatataacccccccccaaaaccctcctccaatacaattttttagttcccc 48620312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 27143274 - 27143145
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctc----------caaaatcctcctccaatataattttctagttcccca-aaatgaggagggttta 101  Q
    |||||| ||||||||||||||||||||||||||| ||          |||||||||| ||||||| |||||| |||||| ||| |||||| ||| ||||     
T  27143274 aatatatattaaatttgaagaattcatataaaccgtctcaaaccccacaaaatcctcatccaatacaattttttagttctccacaaatgaagagagtttt 27143175  T
Q  102 atattatgaagaaaagttaaccccacaaaa 131  Q
    ||||||| ||||||| | |||||| |||||    
T  27143174 atattataaagaaaaataaaccccccaaaa 27143145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 37756711 - 37756805
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatga 110  Q
    ||||||| |||||||| ||||||||||||||  || ||| |||||||||| | ||||||  |||||||| |||||||| || |||  ||||||||    
T  37756711 atagattgaatttgaaaaattcatataaacctcccgaaaccctcctccaacacaatttttgagttcccccaaatgagggggattttttattatga 37756805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 52430595 - 52430653
Alignment:
Q  58 tcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||||||||| ||||| ||| |||||||||| |||| ||||| |||||||||    
T  52430595 tcctccaatataattttttagtttccctaaatgaggagagttttatattttgaagaaaa 52430653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 15451325 - 15451362
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  15451325 tagattaaatttgaagaattcatgtaaaccctccaaaa 15451362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 9836760 - 9836804
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||    
T  9836760 atagattaactttgaagaattcatataaaccctctaaaaccctcc 9836804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 16535784 - 16535749
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctcca 51  Q
    |||||||||||||||| |||||||||||||||||||    
T  16535784 atagattaaatttgaaaaattcatataaaccctcca 16535749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 51
Target Start/End: Complemental strand, 24280007 - 24279972
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctcca 51  Q
    |||||||||||||||| |||||||||||||||||||    
T  24280007 atagattaaatttgaaaaattcatataaaccctcca 24279972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 59 - 118
Target Start/End: Complemental strand, 30307413 - 30307354
Alignment:
Q  59 cctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    |||| |||| |||||| ||||||||| ||||||||||| ||| ||||| |||||||||||    
T  30307413 cctcaaatacaattttttagttcccccaaatgaggaggattttatattttgaagaaaagt 30307354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Original strand, 8827808 - 8827846
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  8827808 atagattaaatttgaagaattgatataaaccctctaaaa 8827846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 16423006 - 16422968
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  16423006 atagattaaatttgaagaattcatgtaaaccctctaaaa 16422968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 22165699 - 22165752
Alignment:
Q  94 agggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    |||||||| ||||||||||||||||||||||| |||||| |||| || |||||||    
T  22165699 agggtttagtattatgaagaaaagttaacccc-caaaactctcccctcccatttt 22165752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 40423061 - 40423095
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctcc 50  Q
    |||||||||||||||||||||||||||||| ||||    
T  40423061 atagattaaatttgaagaattcatataaactctcc 40423095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 46669991 - 46670060
Alignment:
Q  64 aatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccc 134  Q
    |||| |||||| ||||||||  ||||||||||||||| ||||| |||||||||  ||||||| ||||||||    
T  46669991 aatacaattttttagttccctcaaatgaggagggttttatattttgaagaaaa-ataacccctcaaaaccc 46670060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 51258721 - 51258827
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||| ||| ||| |||||||||||||  |||||| ||||||||||| || ||||||  ||||||  |||||| | |||| | || | ||| ||||||||    
T  51258721 aataacataaattgaatttgaagaatttgtataaatcctccaaaatcttcatccaatgcaatttttgagttcctccaaattacgaagattttatattatg 51258820  T
Q  110 aagaaaa 116  Q
    |||||||    
T  51258821 aagaaaa 51258827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 125
Target Start/End: Complemental strand, 54205895 - 54205813
Alignment:
Q  43 aaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaacccc 125  Q
    ||||||| |||||| |||||| ||| ||||||  |||||||| ||||||||||| |||  | |||||||||||| | ||||||    
T  54205895 aaccctcaaaaatcgtcctcctatacaatttttgagttcccccaaatgaggaggattttgttttatgaagaaaaatgaacccc 54205813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 4442012 - 4442077
Alignment:
Q  51 aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||| |||| ||||||| |||||| ||| ||||  ||||||||||||||| ||||| |||||||||    
T  4442012 aaaaccctcttccaatacaattttgtagctccctcaaatgaggagggttttatattttgaagaaaa 4442077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 54
Target Start/End: Original strand, 15498783 - 15498820
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  15498783 tagattaaatttaaagaattcatgtaaaccctccaaaa 15498820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 45899451 - 45899406
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaa 87  Q
    |||| |||||||| |||||||||||| |||||| ||||||||||||    
T  45899451 aaactctccaaaaccctcctccaatacaattttttagttccccaaa 45899406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 22891273 - 22891313
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||| |||||||||||||||||||||||| | ||||||    
T  22891273 atatagaataaatttgaagaattcatataaacacaccaaaa 22891313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 22942937 - 22942977
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||| |||||||||||||||||||||||| | ||||||    
T  22942937 atatagaataaatttgaagaattcatataaacacaccaaaa 22942977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 25843901 - 25843817
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaacccca 126  Q
    |||| ||| ||||||||||||||||| | ||||  |||| ||| ||||||| || ||||  |||||||| ||||| |||||||||    
T  25843901 aaactctcaaaaatcctcctccaatacactttttgagtttccccaaatgagaagagttttgtattatgatgaaaaattaacccca 25843817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 57
Target Start/End: Original strand, 42759640 - 42759680
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    ||||||||||||||| ||||||| |||||||||||| ||||    
T  42759640 tagattaaatttgaaaaattcatgtaaaccctccaagatcc 42759680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 42777286 - 42777345
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||| |||||||||||||||||||| |||||| | ||||| | |||||||||| ||||||    
T  42777286 atataaattaaatttgaagaattcatgtaaacctttcaaaa-cttcctccaatacaatttt 42777345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 43793488 - 43793452
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||||||| || ||||||||||||||||||||||    
T  43793488 agattaaatttaaaaaattcatataaaccctccaaaa 43793452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 47669903 - 47669859
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    ||||||| |||||||| ||||||||||||||||||| || |||||    
T  47669903 atagattgaatttgaaaaattcatataaaccctccataaccctcc 47669859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 2e-49; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 27255292 - 27255077
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||| ||||| ||| |||||||||||| ||||| || ||| | |||| |||||||   |||||||||||||||  |||||||||||||    
T  27255292 atagattaaatttgaaaaattcttattaaccctccaaaaccctcccccgatacatttttttagttccttcaaatgaggagggttttgtattatgaagaaa 27255193  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    |||||||| | |||| ||||||||| |||||||||||  ||||||| ||||||||||| ||||||||||||| || || ||  |||||||| ||||||||    
T  27255192 agttaacctcccaaagccctcctctcccattttcctctatttcttccacttgctcattccttttttctcaagtcttcccctttcttcccctccaaactcg 27255093  T
Q  216 gaaacaaagccttaga 231  Q
     |||||||||||||||    
T  27255092 caaacaaagccttaga 27255077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 17760473 - 17760687
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||||||| ||| |||||||||||| || ||||||||| |||||| ||||||| | |||||||||||||||  |||||||||||||    
T  17760473 atagattaaatttgaagaattcttattaaccctccaaaacccccctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaa 17760572  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatt-tcttttttctcaagcctccctctaccttccccttcaaactc 214  Q
    |||||||||| |||| | ||||||| |||||||||||  ||||||| ||||||| ||| | |||| || ||||||| || || ||||||||| ||| |||    
T  17760573 agttaaccccccaaagctctcctctcccattttcctctatttcttccacttgcttattcttttttatcccaagccttcccctcccttcccctccaagctc 17760672  T
Q  215 ggaaacaaagcctta 229  Q
    | |||||||| ||||    
T  17760673 gcaaacaaaggctta 17760687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 36886962 - 36886742
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    |||||||||||||||| |||||||||||||||||||||| ||          |||||||||  |||||| |||||||||||||||||| ||||||| |||    
T  36886962 atagattaaatttgaaaaattcatataaaccctccaaaacccccaaaaaccctcctccaatgcaattttttagttccccaaaatgaggggggtttagtat 36886863  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccc 205  Q
    |||||||||||||||||||| |||| |||||| ||  ||||||||||  ||||||| ||||||||||| |||||||| ||||||| || || ||||||||    
T  36886862 tatgaagaaaagttaacccc-caaagccctcccctctcattttcctctatttcttccacttgctcattccttttttcccaagccttcccctcccttcccc 36886764  T
Q  206 ttcaaactcggaaacaaagcct 227  Q
    | |||||||| |||||||||||    
T  36886763 tccaaactcgcaaacaaagcct 36886742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 52068139 - 52068347
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| ||||| |||||| |||||||||||| |||||| ||||||| | |||||||||| ||||  |||||||||||||||||    
T  52068139 attaaatttgaagaattcttattaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaagtt 52068238  T
Q  120 aa---ccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcgg 216  Q
    ||   |||| |||| ||||||||| |||||||||||  ||||||| | || || |||||||||||||||||||| || || | ||||||| |||||||||    
T  52068239 aacccccccccaaagccctcctctcccattttcctctatttcttccatttacttatttcttttttctcaagccttcccctccattcccctccaaactcgg 52068338  T
Q  217 aaacaaagc 225  Q
    |||||||||    
T  52068339 aaacaaagc 52068347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 232
Target Start/End: Original strand, 34154330 - 34154542
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    ||||||||| |||||||| ||| |||||||||||| || ||||||||| |||||| ||||||| | ||||||||| |||||  |||||||||||||||||    
T  34154330 attaaatttaaagaattcttattaaccctccaaaacccccctccaatacaattttttagttcctccaaatgaggaaggttttgtattatgaagaaaagtt 34154429  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaa 219  Q
    |||||| |||| ||||| |||| ||||||||||  ||||||| |||| || ||| |||||||| ||||||| |  || ||||||||| |||||||| |||    
T  34154430 aaccccccaaagccctcatctttcattttcctctatttcttccacttacttattccttttttcccaagccttctcctcccttcccctccaaactcgcaaa 34154529  T
Q  220 caaagccttagat 232  Q
    |||||||| ||||    
T  34154530 caaagcctaagat 34154542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 36269836 - 36269615
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    ||||||| ||||||||||||||||||||| ||||||||| ||          |||||||||| |||||| ||||||||| |||||||||||||||  |||    
T  36269836 atagattgaatttgaagaattcatataaatcctccaaaaccccccgaaactctcctccaatacaattttttagttcccccaaatgaggagggttttgtat 36269737  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccc 205  Q
    |||||||||||||||||||| |||| |||||| || ||||||| |||  ||||||| ||||||||||| |||||||| ||||||| || ||  |||||||    
T  36269736 tatgaagaaaagttaaccccccaaagccctcccctcccatttttctctatttcttccacttgctcattccttttttcccaagccttcccctcacttcccc 36269637  T
Q  206 ttcaaactcggaaacaaagcct 227  Q
    | |||||||| |||||||||||    
T  36269636 tccaaactcgcaaacaaagcct 36269615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 33324713 - 33324551
Alignment:
Q  19 gattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||| |||||| ||||||||  |||||||||||||||| ||||||||||||||||    
T  33324713 gattaaatttgaagaattcatataaaccctctaaaaccctcctctaatacaatttt-tagttccctcaaatgaggagggtttagtattatgaagaaaagt 33324615  T
Q  119 taaccccacaaaaccctcctcttcc-attttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    ||||||| |||| ||||| |||||| |||||||||  ||||||| ||||||||||| ||||||||    
T  33324614 taaccccccaaagccctc-tcttcccattttcctctatttcttctacttgctcattccttttttc 33324551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 16 - 190
Target Start/End: Complemental strand, 50226123 - 50225949
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||| ||||||||||||||||||||| ||||  ||||||||||| |||||| ||||||  | ||||||| ||||||||||||||||||||||    
T  50226123 atagattaaattagaagaattcatataaaccctcaaaaacgctcctccaatacaattttttagttcttccaaatgagaagggtttaatattatgaagaaa 50226024  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    |||||||||| ||||| | ||  ||| ||||||||||  ||||||  || |||| ||||||| |||| |||||||    
T  50226023 agttaaccccccaaaatcttcgcctttcattttcctctatttctttcacctgcttatttcttctttcccaagcct 50225949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 5584555 - 5584422
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    |||||| |||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| ||||||||| |||||||    
T  5584555 ccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcctctcccatttt 5584456  T
Q  149 cctcgttttcttcaacttgctcatttcttttttc 182  Q
    | ||  ||||||| ||||||||||| ||||||||    
T  5584455 cttctatttcttccacttgctcattccttttttc 5584422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 29092143 - 29091959
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| ||||||  ||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| |||||||||     
T  29092143 aaaccccccaaaactctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccc-caaagccctcctctc 29092045  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    |||||||||||  ||||||| |||| || |||  ||||||| ||| ||| || || |||||| || |||||||| |||||||||||    
T  29092044 ccattttcctctatttcttccacttacttattcattttttcccaaaccttcccctcccttcctctccaaactcgcaaacaaagcct 29091959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 51 - 229
Target Start/End: Original strand, 37649649 - 37649827
Alignment:
Q  51 aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcc 150  Q
    |||| |||||||||||| |||||| ||||||| | |||||||||||||||  |||||| ||||||||||||| || |||| ||||||||| |||||||||    
T  37649649 aaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattataaagaaaagttaacaccccaaagccctcctctcccattttcc 37649748  T
Q  151 tcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcctta 229  Q
    ||  ||||||| |||| || |||  ||||||| ||||||| |  || | ||||||| |||||||| |||||||||||||    
T  37649749 tctatttcttccacttacttattcattttttcccaagccttctcctccattcccctccaaactcgcaaacaaagcctta 37649827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 17556750 - 17556537
Alignment:
Q  20 attaaatttgaagaattcat----ataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||    |||||||| |||||| |||||||||||| |||||| ||||||||| ||||||||||||||| ||||| ||||||||    
T  17556750 attaaatttgaagaattcattcatataaaccccccaaaaccctcctccaatagaattttttagttcccccaaatgaggagggttttatattttgaagaaa 17556651  T
Q  116 agttaaccccacaaaacc-ctcctcttccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcctccctctaccttccccttcaaact 213  Q
    | | | |||| |||| || ||||||  ||| | |||||  ||||||| |||| ||| || | |||||||| || |||||| || ||||||||| ||||||    
T  17556650 aataagccccccaaagcctctcctc--ccaatgtcctctatttcttccacttactccttcctttttttctgaaccctccc-ctcccttcccctccaaact 17556554  T
Q  214 cggaaacaaagccttag 230  Q
    || ||||||||||||||    
T  17556553 cgcaaacaaagccttag 17556537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 46001623 - 46001484
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| ||||||  |||||| |||| |||||| ||||||| | ||||||||||||||| |||||||||||||||||||||| | ||||||||||||||     
T  46001623 aaaccccccaaaactctcctcaaatacaattttttagttcctccaaatgaggagggttttatattatgaagaaaagttaacctc-caaaaccctcctctc 46001525  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||||||||  ||||||| |||| || ||| ||||||||    
T  46001524 ccattttcctctatttcttccacttacttattccttttttc 46001484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 43036311 - 43036424
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||||||||| ||| |  ||||||||| |||||| |||||| || ||||||||||||||| ||||| ||||||||    
T  43036311 atagattaaatttgaagaattcatataaaccctcccaaacctccctccaatacaattttttagttctcccaaatgaggagggttttatatt-tgaagaaa 43036409  T
Q  116 agttaaccccacaaa 130  Q
    | |||||||| ||||    
T  43036410 aattaaccccccaaa 43036424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 213
Target Start/End: Original strand, 41817330 - 41817493
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    |||||| |||||||||||| |||||| ||||||| | |||||| ||||||||  ||||||||||||||||||||||| ||||  |||||||| |||||||    
T  41817330 ccaaaaccctcctccaatacaattttttagttcctccaaatgatgagggttttgtattatgaagaaaagttaacccc-caaagtcctcctctcccatttt 41817428  T
Q  149 cctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaact 213  Q
    ||||  ||||||| |||| || ||| |||||||  |||| ||||  || ||||||||| ||||||    
T  41817429 cctctatttcttccacttacttattcctttttttccaagtctcctcctcccttcccctccaaact 41817493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 116
Target Start/End: Original strand, 28848788 - 28848887
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||||||| ||||||  |||||||| |||||||||||||||  | ||||||||||||    
T  28848788 tagattaaatttgaagaattcatgtaaaccatccaaaaccctcctccaatacaatttttgagttcccccaaatgaggagggttttgtgttatgaagaaaa 28848887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 39886912 - 39887090
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc-----------tccaatataattttctagttccc-caaaatgaggagggtttaat 103  Q
    |||||||||||||||||||||||||||||| |||||||| || ||           ||||||| |||||| |||||||| | |||||||||||||||| |    
T  39886912 atagattaaatttgaagaattcatataaactctccaaaaacccccaaaactttttttccaatacaattttttagttcccaccaaatgaggagggtttagt 39887011  T
Q  104 attatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||||||||||||||||| | |||| |||||| ||  ||||| |||   ||||||| |||||||||||  |||||||    
T  39887012 attatgaagaaaagttaaccacccaaagccctcccctctcatttccctttatttcttccacttgctcattctttttttc 39887090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 42333728 - 42333622
Alignment:
Q  15 tatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaa 114  Q
    |||| ||||||||||||||||||||||||||| |||||||  ||||||||||| || | | ||||| ||| |||||||||||||||  ||||||||||||    
T  42333728 tataaattaaatttgaagaattcatataaaccgtccaaaactctcctccaatacaactctttagtt-ccctaaatgaggagggttttgtattatgaagaa 42333630  T
Q  115 aagttaac 122  Q
    || |||||    
T  42333629 aaattaac 42333622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 137
Target Start/End: Complemental strand, 69824 - 69696
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaatcctcc-------tcca---atataattttctagttccccaaaatgaggagggtttaatatta 107  Q
    |||||||||||| |||||||||||||||||| |||||||||||       ||||   ||| |||||| ||||||| ||||  |||||||||||| |||||    
T  69824 agattaaatttggagaattcatataaacccttcaaaatcctccaaaactttccatcaatacaattttttagttcctcaaac-gaggagggtttagtatta 69726  T
Q  108 tgaagaaaagttaaccccacaaaaccctcc 137  Q
    |||||||||||||||||| |||||||||||    
T  69725 tgaagaaaagttaaccccccaaaaccctcc 69696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 30543349 - 30543450
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaaga 113  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||  ||||| ||||||  |||||||| | ||||||| | |||  |||||||||||    
T  30543349 atatagattaaatttgaagaattcatgtaaaccctccaaaaccctccagcaatacaatttttgagttcccccacatgaggaagattttgtattatgaaga 30543448  T
Q  114 aa 115  Q
    ||    
T  30543449 aa 30543450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 52073447 - 52073659
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||| |||||||| ||||||| |||||||||||||| ||||||| | || ||||||  |||||||| |||||||||||||||   |||||||||||||    
T  52073447 tagattgaatttgaaaaattcatctaaaccctccaaaaccctcctctagtacaatttttgagttcccccaaatgaggagggttttgaattatgaagaaaa 52073546  T
Q  117 gttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctc-cctctaccttccccttcaaactcg 215  Q
     | || ||| |||| || ||| ||  || | || ||  ||||||| |||||||| || |||||||  ||| || | || || ||||||||| ||||||||    
T  52073547 atgaaaccc-caaagccttcccctctcaatgtcatctatttcttccacttgctccttcctttttttgcaaacccctcccctcccttcccctccaaactcg 52073645  T
Q  216 gaaacaaagcctta 229  Q
     |||||||||||||    
T  52073646 caaacaaagcctta 52073659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 5970426 - 5970538
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaag 112  Q
    |||||||| |||||||||||||||||||||||||||| ||||  ||| ||||||| || ||| ||||||| | |||  | |||||||  |||||||||||    
T  5970426 aatatagaataaatttgaagaattcatataaaccctcaaaaactctcatccaatacaactttttagttccaccaaacaatgagggttctatattatgaag 5970525  T
Q  113 aaaagttaacccc 125  Q
    |||| ||||||||    
T  5970526 aaaaattaacccc 5970538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 50587127 - 50586920
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||| |||||||||||||||||||||||||||| ||||| |||||||||||  |||||  || |  ||| ||||||||||| |||  |||||||||||||    
T  50587127 atagtttaaatttgaagaattcatataaacccttcaaaaccctcctccaatgcaattt--taatggccc-aaatgaggaggattttgtattatgaagaaa 50587031  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcg 215  Q
    | | |||||| |||| |||||| ||  || | |||||  ||||||| |||||||| || ||||||||  ||||   ||||| ||||||||| |||||| |    
T  50587030 aatgaaccccccaaagccctcc-ctctcaatgtcctctatttcttccacttgctccttccttttttccaaagctctcctctcccttcccctccaaacttg 50586932  T
Q  216 gaaacaaagcct 227  Q
     |||||| ||||    
T  50586931 caaacaaggcct 50586920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 140
Target Start/End: Complemental strand, 7915603 - 7915472
Alignment:
Q  19 gattaaatttgaagaattcatataaaccctcca----------aaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattat 108  Q
    ||||||||||||||||||||| |||||||||||          ||| |||||||||||| ||||||  | | |||||||||||||||||||  |||||||    
T  7915603 gattaaatttgaagaattcatgtaaaccctccagaacctcccaaaaccctcctccaatacaatttttgaatcccccaaaatgaggagggttctatattat 7915504  T
Q  109 gaagaaaagttaaccccacaaaaccctcctct 140  Q
    |||||||| | |||||| |||| |||||||||    
T  7915503 gaagaaaaatgaaccccccaaagccctcctct 7915472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 2909175 - 2909098
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||| |||||| |||||||||||| |||||| ||||||| | ||||||| |||||||  |||||||||||||||||    
T  2909175 aaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgagtagggttttctattatgaagaaaagtt 2909098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 15463903 - 15463826
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgagg 93  Q
    ||||||| |||||||| ||||||||||||||||||| || ||||| |||||| ||||||  |||||||| ||||||||    
T  15463903 atagattgaatttgaaaaattcatataaaccctccataaccctcccccaatacaatttttcagttcccccaaatgagg 15463826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 35619506 - 35619602
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||||||||||||| ||||||| ||||| |||| ||||||| |||||| ||||||||  | ||||  || |||| ||||| |||||||||    
T  35619506 attaaatttgaagaattcatacaaacccttcaaaaccctcatccaatacaattttttagttccctcagatgattagagttttatattttgaagaaaa 35619602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 92
Target Start/End: Original strand, 51246562 - 51246637
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgag 92  Q
    ||||||| |||||||| |||||||||||||||| ||||| |||||||||||| ||||||  |||||||| |||||||    
T  51246562 atagattgaatttgaaaaattcatataaaccct-caaaaccctcctccaatacaatttttgagttcccccaaatgag 51246637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 25561300 - 25561414
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctcc---------aaaatcctcctccaatataattttctagttccccaaaatgaggagggttt 100  Q
    ||||| ||| |||||||||||||||||||||||||| ||||         |||| ||||||||||||||||||| ||||||||| |||||| || |||||    
T  25561300 aataacatatattaaatttgaagaattcatataaactctcccaaacccccaaaaccctcctccaatataattttttagttcccc-aaatgacgatggttt 25561398  T
Q  101 aatattatgaagaaaa 116  Q
     ||||| |||||||||    
T  25561399 tatattttgaagaaaa 25561414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 231
Target Start/End: Original strand, 38795431 - 38795542
Alignment:
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaa 219  Q
    |||||| |||||||||| ||  ||||| |||||  ||||||| ||||||||||| ||||||||||||| || ||  | ||||| |||  ||||||| |||    
T  38795431 aaccccccaaaaccctcttcacccattgtcctctatttcttccacttgctcattccttttttctcaagtcttccctttccttctcctctaaactcgcaaa 38795530  T
Q  220 caaagccttaga 231  Q
    ||||||||||||    
T  38795531 caaagccttaga 38795542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 49102964 - 49103050
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||||||||||||||||||||||          |||||||| |||||| ||||||||| ||||||||||||||| || || |||||||||    
T  49102964 attaaatttgaagaattcatataaaccctc----------ctccaatacaattttttagttcccccaaatgaggagggttttatgttttgaagaaaa 49103050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 108
Target Start/End: Original strand, 34750007 - 34750095
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattat 108  Q
    ||||||||||||||||  ||||||| ||| ||||||||||| |||||| ||||||  |||||||| |||| ||||  |||| |||||||    
T  34750007 attaaatttgaagaataaatataaatccttcaaaatcctccaccaatacaatttttgagttcccccaaataaggatagttttatattat 34750095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 50476621 - 50476521
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||| || || || ||||||||||||||||| |||| |||||||||||| ||||||  |||||||  |||||||| || |||  ||||||||| |||    
T  50476621 atagattgaaattaaaaaattcatataaaccctcgaaaaccctcctccaatacaatttttgagttccctcaaatgagggggattttgtattatgaataaa 50476522  T
Q  116 a 116  Q
    |    
T  50476521 a 50476521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 24436956 - 24437030
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||| |||||||| ||||||| |||| |||||| ||  ||||| ||||||||||||||| ||||| |||||||||    
T  24436956 aaactctccaaaaccctcctctaatacaattttttaactcccccaaatgaggagggttttatattttgaagaaaa 24437030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 26 - 116
Target Start/End: Complemental strand, 40243444 - 40243354
Alignment:
Q  26 tttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||| |||||||| |||  |||  || ||| ||||||| ||| |||||| |||||||||| |||||||  ||||||||||||||    
T  40243444 tttgaagaatttatataaactctctcaaactcttctctaatataactttttagttctccaaaatgagaagggttttgtattatgaagaaaa 40243354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 41432790 - 41432863
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||| |||||| |||||||||||| || |||  ||| ||||||| |||||||||||| |||||||||||||||    
T  41432790 aaaccccccaaaaccctcctccaatacaaattttgagtcccccaaa-tgaggagggttttatattatgaagaaaa 41432863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 116
Target Start/End: Complemental strand, 42806227 - 42806155
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||||| |||| ||||||| |||||| |||| |||||||||||| ||||||| ||||| |||||||||    
T  42806227 aaaccctccaaaa-cctcttccaatacaattttttagt-ccccaaaatgagaagggttttatattttgaagaaaa 42806155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Original strand, 28718807 - 28718839
Alignment:
Q  22 taaatttgaagaattcatataaaccctccaaaa 54  Q
    |||||||||||||||||||||||||||||||||    
T  28718807 taaatttgaagaattcatataaaccctccaaaa 28718839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 33854827 - 33854867
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatc 56  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  33854827 atagattaaatttgaaaaattcatataaacgctccaaaatc 33854867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 33926095 - 33926055
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatc 56  Q
    |||||||||||||||| ||||||||||||| ||||||||||    
T  33926095 atagattaaatttgaaaaattcatataaacgctccaaaatc 33926055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 38795396 - 38795432
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||||||||||||||||||||||||| |||||||    
T  38795396 agattaaatttgaagaattcatataaaccttccaaaa 38795432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 41428025 - 41428112
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcc 137  Q
    ||||||||||||||||||||||||||  |||||||| ||||||||||  | |   ||||||||||||| |||||||  |||||| ||||    
T  41428025 ccaaaatcctcctccaatataatttttgagttcccc-aaatgaggagattctttcattatgaagaaaaattaacccttcaaaactctcc 41428112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 52
Target Start/End: Original strand, 41432750 - 41432786
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaa 52  Q
    |||||||||||||||||||||||| ||||||||||||    
T  41432750 atagattaaatttgaagaattcatgtaaaccctccaa 41432786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 86
Target Start/End: Original strand, 45752229 - 45752292
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaa 86  Q
    ||||||||||||||||||| ||||||||||| |||   ||| |||||| |||||| |||||||||||    
T  45752229 attaaatttgaagaattcacataaaccctcccaaa---tcccccaatacaattttttagttccccaa 45752292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 80
Target Start/End: Complemental strand, 666370 - 666303
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagtt 80  Q
    |||||| ||||||||||||||||||||||||||  | |||||  || |||||||| |||||| |||||    
T  666370 aatatatattaaatttgaagaattcatataaacaattcaaaactctgctccaatacaattttttagtt 666303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 51
Target Start/End: Original strand, 2925923 - 2925958
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctcca 51  Q
    |||||||||||||||| |||||||||||||||||||    
T  2925923 atagattaaatttgaaaaattcatataaaccctcca 2925958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Complemental strand, 1063430 - 1063392
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaa 52  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  1063430 atatagattagatttgaaaaattcatataaaccctccaa 1063392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Complemental strand, 32672623 - 32672573
Alignment:
Q  90 gaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctct 140  Q
    |||||||||||| ||| ||||||||||||||||||| |||| || ||||||    
T  32672623 gaggagggtttagtatgatgaagaaaagttaaccccccaaagccgtcctct 32672573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 36325808 - 36325774
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctcc 50  Q
    ||||||| |||||||||||||||||||||||||||    
T  36325808 atagattgaatttgaagaattcatataaaccctcc 36325774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 4204830 - 4204948
Alignment:
Q  69 aattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgc 168  Q
    |||||| ||||||||| ||||||| ||| |||  ||||||||||||||||||| ||| ||| |||||||  | ||||||||||   ||||||| || | |    
T  4204830 aattttttagttcccccaaatgagtaggttttg-tattatgaagaaaagttaatccc-caagaccctcc-atcccattttcctttgtttcttccacctac 4204926  T
Q  169 tcatttcttttttctcaagcct 190  Q
    ||||| |||||||| |||||||    
T  4204927 tcattccttttttcccaagcct 4204948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 49
Target Start/End: Complemental strand, 6015520 - 6015491
Alignment:
Q  20 attaaatttgaagaattcatataaaccctc 49  Q
    ||||||||||||||||||||||||||||||    
T  6015520 attaaatttgaagaattcatataaaccctc 6015491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Original strand, 27102809 - 27102842
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaacc 46  Q
    |||| |||||||||||||||||||||||||||||    
T  27102809 aataaagattaaatttgaagaattcatataaacc 27102842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 34738409 - 34738372
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaa 53  Q
    ||||||||||||| ||||||||||||||| ||||||||    
T  34738409 atagattaaatttaaagaattcatataaatcctccaaa 34738372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 49
Target Start/End: Complemental strand, 33579345 - 33579313
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctc 49  Q
    ||||||||||||||||||||||| |||||||||    
T  33579345 tagattaaatttgaagaattcatgtaaaccctc 33579313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 37955268 - 37955232
Alignment:
Q  19 gattaaatttgaagaattcatataaaccctccaaaat 55  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  37955268 gattaaatttaaagaattcatataaatcctccaaaat 37955232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 38795064 - 38795020
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    ||||||| || ||||| |||||||||||||||||||||| |||||    
T  38795064 atagattgaaattgaaaaattcatataaaccctccaaaaacctcc 38795020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 41427979 - 41428023
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    |||||||| ||||||||||||||| | ||||||| ||||||||||    
T  41427979 aatatagaataaatttgaagaatttacataaaccttccaaaatcc 41428023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 50162228 - 50162145
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggttt 100  Q
    ||||||| ||||||||||| || | ||| || |||||||||||||||| ||| ||||||  | |||||| |||| ||||||||||    
T  50162228 atagattcaatttgaagaactcgtgtaa-ccttccaaaatcctcctccgatacaattttaaaattccccgaaataaggagggttt 50162145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 225
Target Start/End: Original strand, 32719378 - 32719582
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||| |||||| ||||||| | |||||||||||||||  |||||||||||||||||    
T  32719378 attaaatttgaagaattcttattaaccctccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtt 32719477  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaa 219  Q
    |||||| |||| ||||||| | |||||||||||  ||||||| |||| || ||| |||||||| | ||||| || || ||||||||| |||||||| |||    
T  32719478 aacccc-caaagccctcctttcccattttcctctatttcttccacttacttattccttttttccctagccttcccctcccttcccctccaaactcgcaaa 32719576  T
Q  220 caaagc 225  Q
    ||||||    
T  32719577 caaagc 32719582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 56 - 233
Target Start/End: Complemental strand, 1567324 - 1567147
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgtt 155  Q
    |||| ||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| | ||||||| |||||||| ||  |    
T  1567324 cctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctcccattttcttctat 1567225  T
Q  156 ttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttagata 233  Q
    |||||| ||||||||||| ||||||||  |||||| || || ||||||||| |||||||| ||||||| |||||||||    
T  1567224 ttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaacaaaaccttagata 1567147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 10 - 227
Target Start/End: Original strand, 33590311 - 33590536
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcc---------tcctccaatataattttctagttccccaaaatgaggagggttt 100  Q
    ||||| |||||||||||||||||||||||||| |||||||||||| ||         || ||||||| |||||| ||| |||||||| ||||||||||||    
T  33590311 aataacatagattaaatttgaagaattcatattaaccctccaaaacccccaaaaccctcatccaatacaattttttagctccccaaa-tgaggagggttt 33590409  T
Q  101 aatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctacct 200  Q
      ||||||||||||||||||||||| ||||| ||||| || |||||||||||  ||| ||  ||||||||||| |||| ||||||| ||| || || | |    
T  33590410 tgtattatgaagaaaagttaaccccccaaaatcctcccctcccattttcctctatttttttcacttgctcattcctttcttctcaaaccttccactccat 33590509  T
Q  201 tccccttcaaactcggaaacaaagcct 227  Q
    |||||| |||||||| |||||||||||    
T  33590510 tcccctccaaactcgcaaacaaagcct 33590536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 32222095 - 32221919
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc---------tcctccaatataattttctagttccccaaaatgaggagggtttaatatt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||         |||||||||| |||||| ||||||| | |||||||||| |||| |||||    
T  32222095 atagtttaaatttgaagaattcatataaaccctccaaaatccctaaaactctcctccaatacaattttttagttcctccaaatgaggagagtttgatatt 32221996  T
Q  107 atgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttct 183  Q
    || |||||||||||||||| |||||||||||||||| ||||| ||   ||||||| ||||||| |||  ||||||||    
T  32221995 ataaagaaaagttaacccctcaaaaccctcctcttctatttttctttatttcttccacttgcttattctttttttct 32221919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 26713946 - 26713733
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagg-gtttaatattatgaagaa 114  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||  |||||||| |||||||||||  |||  ||| ||||||||    
T  26713946 atagaataaatttgaagaattcatataaaccctccaaaaccctcctccaatacaatttttgagttcccc-aaatgaggaggattttcttatcatgaagaa 26713848  T
Q  115 aagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactc 214  Q
    || |||||||| |||| |||||| || ||| | | |||  ||||||| |||||||| || |||| |||  || ||  || || ||||||||| |||||||    
T  26713847 aaattaacccctcaaagccctcccctcccaatgtactctatttcttccacttgctccttcctttattccaaaaccctcccctcccttcccctccaaactc 26713748  T
Q  215 ggaaacaaagcctta 229  Q
    | |||||||||||||    
T  26713747 gcaaacaaagcctta 26713733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 187
Target Start/End: Original strand, 20820532 - 20820698
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||| |||||||||||| |||| ||||  ||| ||||||| |||||| ||||||||| ||| |||||| ||||| |||||||||||||||||    
T  20820532 attaaatttgaaaaattcatataaatcctctaaaactctcatccaatacaattttttagttcccccaaacgaggagagtttagtattatgaagaaaagtt 20820631  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaag 187  Q
    |||||| |||| |||||| || ||||||| ||   ||||||| ||||| ||| |||||||||| ||||    
T  20820632 aaccccccaaagccctcccctcccatttttctttatttcttccacttgttca-ttcttttttcgcaag 20820698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 43 - 190
Target Start/End: Original strand, 11180184 - 11180330
Alignment:
Q  43 aaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttc 142  Q
    |||||||||||| ||||  |||||| |||| | ||||||| | |||||||||||||||  ||||||| ||||||||||||||| |||| ||||||| | |    
T  11180184 aaccctccaaaaccctctaccaatacaattctttagttcctccaaatgaggagggttttgtattatggagaaaagttaaccccccaaagccctcct-tcc 11180282  T
Q  143 cattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    ||||||||||  ||||||| ||||||||||| |||||||| |||||||    
T  11180283 cattttcctctatttcttctacttgctcattccttttttcccaagcct 11180330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 12779606 - 12779387
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatc---------ctcctccaatataattttctagttccccaaaatgaggagggtttaatatt 106  Q
    |||||||||||||||||||||| ||| ||||||||||||||         ||||||||||| || ||| ||||||||| |||| || |||||||  || |    
T  12779606 atagattaaatttgaagaattcttattaaccctccaaaatctccaaaaccctcctccaatacaactttttagttcccccaaataagaagggttttgtagt 12779507  T
Q  107 atgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccct 206  Q
    | ||||||||||||||||| |||| ||||||| | |||||||||||  ||| ||| ||||||||||| |||||||  ||| ||| || || ||||| ||     
T  12779506 acgaagaaaagttaacccc-caaagccctcct-tcccattttcctctatttattctacttgctcattcctttttttccaaaccttcccctcccttcacc- 12779410  T
Q  207 tcaaactcggaaacaaagcctta 229  Q
    || |||||| |||||||||||||    
T  12779409 tccaactcgcaaacaaagcctta 12779387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 181
Target Start/End: Original strand, 28551887 - 28552048
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcc-tcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    |||||||||||||||||||||||||||  |||||| || ||||| |||| || ||| ||||| | | |||||||||| ||||  |||||||||||||||     
T  28551887 attaaatttgaagaattcatataaacctcccaaaaaccctcctc-aatacaaatttatagtttctccaaatgaggagagttttgtattatgaagaaaagc 28551985  T
Q  119 taaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttctttttt 181  Q
    ||||||| |||| || ||| || |||||||| ||  ||||||| ||||||||||| |||||||    
T  28551986 taacccctcaaagccatcccctcccattttcttctatttcttccacttgctcattcctttttt 28552048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 49 - 224
Target Start/End: Original strand, 24874966 - 24875138
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    |||||| |||||||||||| ||| || ||||||||| |||||||| ||||||| ||||||||||||||||| ||||| |||| |||||| || |||||||    
T  24874966 ccaaaaccctcctccaatacaatgttttagttcccc-aaatgagg-gggtttagtattatgaagaaaagttgacccc-caaagccctcccctcccatttt 24875062  T
Q  149 cctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaag 224  Q
    | |   ||||||| | ||||| ||| |||||||| ||||| | || || |||| || |||||||||| ||||||||    
T  24875063 cttatatttcttccatttgcttattccttttttcccaagcattcccctccctttcctttcaaactcgcaaacaaag 24875138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 13380624 - 13380523
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagtt-ccccaaaatgaggagggtttaatattatgaagaa 114  Q
    ||||||||||||||||||||| || ||||| |||||||| |||| ||||||| ||||||  |||| |||| ||||||||| | ||| |||||||||||||    
T  13380624 atagattaaatttgaagaatttatgtaaacgctccaaaaccctcttccaatacaatttttgagttccccccaaatgaggatgattttatattatgaagaa 13380525  T
Q  115 aa 116  Q
    ||    
T  13380524 aa 13380523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 29054662 - 29054589
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaa 87  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||| | ||||| |||||| ||||||| ||||    
T  29054662 atatagattaaatttgaaaaattcatataaaccctcaaaaatcctcattcaatacaattttttagttcctcaaa 29054589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 206
Target Start/End: Complemental strand, 33755132 - 33754947
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||| |||||| ||||||||||||||| |||||  |||||||||||| |||| | ||||| ||| ||||||||| |||||| |      ||||||    
T  33755132 atagattaattttgaataattcatataaaccccccaaagccctcctccaatacaattgtttagtttccccaaatgaggaaggtttact------aagaaa 33755039  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatt-tcttttttctcaagcctccctctaccttcccct 206  Q
    |||||| ||| ||||||| | |  | |||||||||||  ||| ||| ||||||||||| | ||||||| |||| || |||||  ||||||||    
T  33755038 agttaatcccccaaaacctttccataccattttcctctatttattccacttgctcattcttttttttcccaagtcttcctctcacttcccct 33754947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 34557163 - 34557267
Alignment:
Q  19 gattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    ||||||||||||||||||||| ||||| || |||||| ||||||||| | ||||||  ||||||| |||||||| ||| | |  |||||| ||||||| |    
T  34557163 gattaaatttgaagaattcatgtaaacgcttcaaaattctcctccaaaacaatttttgagttccctaaaatgagaaggatattgtattataaagaaaaat 34557262  T
Q  119 taacc 123  Q
    |||||    
T  34557263 taacc 34557267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 15615758 - 15615719
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15615758 agattaaatttgaagaattcatataaaccctccaaaatcc 15615719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 232
Target Start/End: Complemental strand, 6855683 - 6855502
Alignment:
Q  50 caaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttc 149  Q
    ||||| |||||  ||||| |||||| ||||||| | ||| |||   |||||||||||||||||||||||||||||| |||| | || | || ||||||||    
T  6855683 caaaaccctccgacaatacaattttttagttcctccaaacgagataggtttaatattatgaagaaaagttaaccccccaaagctcttccctcccattttc 6855584  T
Q  150 ctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttagat 232  Q
    |||  ||| ||  | ||||||| |||||||||  ||||||| || || ||||||| | |||||||  ||||||| ||| ||||    
T  6855583 ctctatttatttcatttgctca-ttctttttttccaagccttcccctcccttcccttccaaactcacaaacaaaacctaagat 6855502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 25072513 - 25072557
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  25072513 aataacatagattaaatttgaagaattcgtataaaccctccaaaa 25072557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 144
Target Start/End: Complemental strand, 33212409 - 33212287
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    ||||||||||||||||||||||||||||  ||||| | || ||||||| || ||| ||||||||| ||||||| || || |  ||||||||||| || ||    
T  33212409 attaaatttgaagaattcatataaaccc-acaaaaccgtcatccaatacaactttttagttcccc-aaatgagcagagtgttgtattatgaagacaaatt 33212312  T
Q  120 aaccccacaaaaccctcctcttcca 144  Q
    |||||| |||| || ||| ||||||    
T  33212311 aacccctcaaagccttccccttcca 33212287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 6688048 - 6688144
Alignment:
Q  30 aagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaat---attatgaagaaaagttaaccc 124  Q
    |||||||||||||||||| ||||||  ||||||||||| |||||| |||||||| ||| | ||||| ||||| |   || ||||||||||||||||||    
T  6688048 aagaattcatataaaccccccaaaactctcctccaatacaattttttagttccctaaa-taaggagagtttagtgtaataatgaagaaaagttaaccc 6688144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 25073299 - 25073361
Alignment:
Q  71 ttttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccc 134  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||||| | |||||| ||||||||    
T  25073299 ttttgtagttccccaaaatgaggagggttttatattttgaagaaaaataaacccc-caaaaccc 25073361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 13 - 131
Target Start/End: Original strand, 2502351 - 2502480
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctc----------caaaatcctcctccaatataattttctagttcccca-aaatgaggagggttta 101  Q
    |||||| ||||||||||||||||||||||||||| ||          |||||||||| ||||||| |||||| |||||| ||| |||||| ||| ||||     
T  2502351 aatatatattaaatttgaagaattcatataaaccgtctcaaaccccacaaaatcctcatccaatacaattttttagttctccacaaatgaagagagtttt 2502450  T
Q  102 atattatgaagaaaagttaaccccacaaaa 131  Q
    ||||||| ||||||| | |||||| |||||    
T  2502451 atattataaagaaaaataaaccccccaaaa 2502480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 4027026 - 4027083
Alignment:
Q  26 tttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccc 83  Q
    |||||| |||||||||||| |||| |||| |||||||| |||||||||| ||||||||    
T  4027026 tttgaaaaattcatataaatcctcaaaaaccctcctccgatataattttttagttccc 4027083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 18618297 - 18618199
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||| |||||||||| ||||| |||  ||||| |||||||||| ||||||  | ||| || ||| || ||| ||||  ||||||||||||||    
T  18618297 agattaaatttaaagaattcatgtaaacactcataaatcttcctccaatacaatttttgaattctcccaaacgatgagagttttgtattatgaagaaaa 18618199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 19477349 - 19477311
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||||||||||||||||||||||||| | |||||||    
T  19477349 atagattaaatttgaagaattcatataaatcttccaaaa 19477311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 15986432 - 15986399
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaa 53  Q
    |||||||||||||||||||||||| |||||||||    
T  15986432 attaaatttgaagaattcatataagccctccaaa 15986399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 26289644 - 26289607
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaa 53  Q
    ||||||||||||||||||||||||||||| ||| ||||    
T  26289644 atagattaaatttgaagaattcatataaatccttcaaa 26289607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Original strand, 31345359 - 31345400
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    |||||||||||||||| ||||||||||||| ||||| |||||    
T  31345359 atagattaaatttgaaaaattcatataaactctccataatcc 31345400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Complemental strand, 4464988 - 4464929
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||| |||||| ||||||||| ||||||||| ||||  ||||| |||||||||    
T  4464988 cctcctccaatacaattttttagttcccc-aaatgaggaaggttgtatattttgaagaaaa 4464929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 6218676 - 6218740
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||||||| |||||||||||| ||||| ||||||  || ||||| | |||| ||||||||||||    
T  6218676 aataatataaattaaatttgaataattcttataaaatcttcaaaaccttccttcaatataatttt 6218740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 6671477 - 6671429
Alignment:
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    |||||||||||  ||||||| ||||||||||||| |||||| |||||||    
T  6671477 ccattttcctctatttcttccacttgctcatttcatttttcccaagcct 6671429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 74
Target Start/End: Complemental strand, 6695390 - 6695330
Alignment:
Q  15 tatagattaaatttgaagaattcatataaa-ccctccaaaatcctcctccaatataatttt 74  Q
    ||||||||  |||||| ||||||||||||| ||||| |||||| ||||| |||||||||||    
T  6695390 tatagatttcatttgatgaattcatataaaaccctctaaaatcatcctctaatataatttt 6695330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 92
Target Start/End: Original strand, 20381858 - 20381929
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgag 92  Q
    |||||| |||||||||||||||||||||| ||||| ||| | | |||| |||||| || |||||| |||||||    
T  20381858 attaaaattgaagaattcatataaacccttcaaaa-ccttcacgaatacaattttttaattcccccaaatgag 20381929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 14 - 54
Target Start/End: Complemental strand, 26683412 - 26683372
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||| |||||||||||||||||||| ||||||||| ||||    
T  26683412 atataaattaaatttgaagaattcatgtaaaccctctaaaa 26683372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 95; Significance: 2e-46; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 31082894 - 31082688
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||| ||| || ||||||||| ||| |||||||||||| ||||| |||||||||||    
T  31082894 attaaatttgaagaattcatataaaccccccaaaaccctcctccaatacaatattttagttcccccaaacgaggagggtttagtattacgaagaaaagtt 31082795  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaa 219  Q
    |||||| |||| |||||| || |||||||||||  ||||||| ||||||||||| |||||||| ||||| | || || ||||   || |||||||| |||    
T  31082794 aacccc-caaagccctcccctcccattttcctctatttcttccacttgctcattccttttttcccaagcgttcccctccctt--tctccaaactcgcaaa 31082698  T
Q  220 caaagcctta 229  Q
    ||||||||||    
T  31082697 caaagcctta 31082688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 1364912 - 1364750
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| ||||| |||||| |||||||||||| |||||| ||||||| | |||||||||||||||  |||||||||||||||||    
T  1364912 attaaatttgaagaattcttattaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtt 1364813  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||| |||| ||||||||| |||||||| ||  ||||||| ||||||||||| ||||||||    
T  1364812 aaccccccaaagccctcctctcccattttcttctatttcttccacttgctcattccttttttc 1364750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 227
Target Start/End: Complemental strand, 6656199 - 6655990
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattt--tctagttccccaaaatgaggagggtttaatattatgaagaaaag 117  Q
    |||||||||||||||||| ||| ||||| |||||| |||||||||||| |||||  | ||||||| | |||||||||||||||  |||||||||||||||    
T  6656199 attaaatttgaagaattcttattaaccccccaaaaccctcctccaatacaatttgttttagttcctccaaatgaggagggttttgtattatgaagaaaag 6656100  T
Q  118 ttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcgga 217  Q
    |||||||| |||| ||||||||| |||||||| ||  ||||||| ||||||||||| ||||||||   ||||| || || ||||||||| |||||||| |    
T  6656099 ttaaccccccaaagccctcctctcccattttcttctatttcttccacttgctcattccttttttccttagccttcccctcccttcccctccaaactcgca 6656000  T
Q  218 aacaaagcct 227  Q
     |||||||||    
T  6655999 gacaaagcct 6655990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 11515101 - 11514916
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| | |||||||     
T  11515101 aaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagctctcctctc 11515002  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    |||||||| ||  ||||||| ||||||||||| ||||||||  |||||| || || ||||||||| |||||||| |||||||||||    
T  11515001 ccattttcttctatttcttccacttgctcattccttttttcctaagccttcccctcccttcccctccaaactcgcaaacaaagcct 11514916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 42 - 229
Target Start/End: Original strand, 13018502 - 13018689
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| ||||| |||||| | |||| ||||||| | |||||||||||||||  |||||||||||||||||||| || |||| |||||||||     
T  13018502 aaaccccccaaaaccctcccccaatacatttttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaactccccaaagccctcctctc 13018601  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcctta 229  Q
    |||||||||||  ||||||| |||| |||||| |||||||||||||||| || || ||||||| | |||||||| |||||||||||||    
T  13018602 ccattttcctccatttcttccacttactcattccttttttctcaagccttcccctcccttcccttccaaactcgcaaacaaagcctta 13018689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 42 - 223
Target Start/End: Complemental strand, 37194324 - 37194142
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| | |||| |||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| ||||| ||||    
T  37194324 aaacccccaaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaaccccccaaagccctcgtctt 37194225  T
Q  142 ccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcctccctctaccttccccttcaaactcggaaacaaa 223  Q
    |||||||||||  ||||||| |||| || ||| | |||||||||||| || || || ||||||||| |||||||| |||||||    
T  37194224 ccattttcctctatttcttccacttacttattcctttttttctcaagtcttcccctcccttcccctccaaactcgcaaacaaa 37194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 20 - 223
Target Start/End: Original strand, 15555347 - 15555550
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctc-ctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    |||||||||||||||||| ||| ||||||| |||| |||| |||||||| |||||| ||||||| | ||||||| |||||||  |||||||||||||| |    
T  15555347 attaaatttgaagaattcttattaaccctcaaaaaccctcactccaatacaattttttagttcctccaaatgagaagggttttgtattatgaagaaaaat 15555446  T
Q  119 taaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaa 218  Q
    ||||||| |||| ||||||||| |||||||| ||  ||||||| ||||||||||| ||||||||  ||| || || || |||| |||| |||||||| ||    
T  15555447 taacccc-caaagccctcctctcccattttcttctatttcttccacttgctcattccttttttcctaagtcttcccctccctttccctccaaactcgcaa 15555545  T
Q  219 acaaa 223  Q
    |||||    
T  15555546 acaaa 15555550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 15803267 - 15803171
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || |||||||||||| ||||| |||||||||    
T  15803267 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatacaattttttagttcccccaactgaggagggttttatattttgaagaaaa 15803171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 42 - 221
Target Start/End: Complemental strand, 34757662 - 34757483
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||| ||||||||| |||| |||||||||     
T  34757662 aaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaggttaaccccccaaagccctcctctc 34757563  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaaca 221  Q
    ||||||| |||  ||||||  || |||||||| |||||||| ||| ||| || || ||||||||| |||| ||| |||||    
T  34757562 ccatttttctctatttctttcacctgctcattccttttttcccaaaccttcccctcccttcccctccaaattcgcaaaca 34757483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 10 - 183
Target Start/End: Original strand, 41100097 - 41100269
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||| ||||||||||||| |  |||||||||||||| |||||||||||||||||||| |||||| ||||||||| |||||||||||||||  |||||||    
T  41100097 aataacatagattaaatttaagaaattcatataaaccatccaaaatcctcctccaatacaattttttagttcccc-aaatgaggagggttttgtattatg 41100195  T
Q  110 a-agaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttct 183  Q
    | |||||||||||||||  |||||||||| ||  ||||||| ||  ||||| | |||| |||||| |||||||||    
T  41100196 atagaaaagttaacccc-taaaaccctcccctcacattttcatctatttctcccacttactcattccttttttct 41100269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 26905861 - 26905721
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||||||||| |||||| ||||||| | |||||||||||||||  ||| ||||||||||||||||||| ||||| ||||||||     
T  26905861 aaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtatcatgaagaaaagttaacccctcaaaatcctcctctc 26905762  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    ||||||||||   ||||||| |||||||||||  |||||||    
T  26905761 ccattttcctttatttcttccacttgctcattctttttttc 26905721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 56 - 227
Target Start/End: Complemental strand, 4003471 - 4003300
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgtt 155  Q
    |||||||||||| ||||||  |||||||| |||||||||| ||||  |||||||||||||| |||||||| |||| |||||| || |||||||||||  |    
T  4003471 cctcctccaatacaatttttgagttcccccaaatgaggagagttttgtattatgaagaaaaattaaccccccaaagccctcccctcccattttcctctat 4003372  T
Q  156 ttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    |||||| ||||||||||| ||||||||  |||||  || || |||||| || |||||||  |||||||||||    
T  4003371 ttcttccacttgctcattccttttttccaaagccctcccctcccttccactccaaactcacaaacaaagcct 4003300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 21626218 - 21625992
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc------------tccaatataattttctagttccccaaaatgaggagggtttaat 103  Q
    |||||||||||||||||||||| ||| |||||||||||| |||||            ||||||| || ||| ||||||||| ||||||||| |||||  |    
T  21626218 atagattaaatttgaagaattcttattaaccctccaaaaccctccacaaaacccttctccaatacaactttttagttcccccaaatgaggatggttttgt 21626119  T
Q  104 attatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcc 203  Q
    |||||||||||||||||||||| |||| | ||||| |||||||||||||  ||||||| ||||||||||| |||||||  |||  || || || | ||||    
T  21626118 attatgaagaaaagttaaccccccaaagcactcct-ttccattttcctctatttcttctacttgctcattcctttttttccaaatcttcccctccattcc 21626020  T
Q  204 ccttcaaactcggaaacaaagccttaga 231  Q
    ||| |||| ||| |||||||||||||||    
T  21626019 cctccaaattcgcaaacaaagccttaga 21625992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 229
Target Start/End: Original strand, 35550147 - 35550366
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatatt 106  Q
    |||||||||||||||||||||||||||||||||||||||||          | ||||| || || ||| |||||||||||| ||||||||||||| ||||    
T  35550147 tagattaaatttgaagaattcatataaaccctccaaaatcccacaaaactctactccagtacaactttttagttccccaaa-tgaggagggtttagtatt 35550245  T
Q  107 atgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccct 206  Q
    |||||||| |||||||||  | || |||||| ||||||||||||||  ||||||| ||||  | |||  |||||||||||| || ||  | |||||||||    
T  35550246 atgaagaacagttaaccc--ccaagccctccacttccattttcctctatttcttccacttatttattctttttttctcaagacttcccattccttcccct 35550343  T
Q  207 tcaaactcggaaacaaagcctta 229  Q
     |||||||| |||||||| ||||    
T  35550344 ccaaactcgcaaacaaagtctta 35550366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 43572568 - 43572757
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaacc-----ctc 136  Q
    |||||| ||||||  ||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| ||     |||    
T  43572568 aaaccccccaaaactctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccc-caaagccctcctctc 43572666  T
Q  137 ctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    |||| ||| |||||||  ||||||| |||| |  ||| |||||||| ||||||| || || ||||||||| |||||||| |||||||||||    
T  43572667 ctctcccactttcctctatttcttccacttacctattccttttttcccaagccttcccctcccttcccctccaaactcgcaaacaaagcct 43572757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 230
Target Start/End: Complemental strand, 39750223 - 39750027
Alignment:
Q  26 tttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatatta-tgaagaaaagttaaccc 124  Q
    |||||||||||||| |||||||| ||||| ||  || || || |||||| ||||||||| |||||||||||||||  | ||| |||||||||||||||||    
T  39750223 tttgaagaattcatgtaaaccct-caaaaaccatcttcagtacaattttttagttcccc-aaatgaggagggttttgtgttattgaagaaaagttaaccc 39750126  T
Q  125 cacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaag 224  Q
    | |||| |||||| || |||||||||      ||||| ||||||||||| |||||||| ||||||| || || ||||||||| |||||||| ||| ||||    
T  39750125 c-caaagccctcccctcccattttcc------tcttccacttgctcattccttttttcccaagccttccccttccttcccctccaaactcgcaaagaaag 39750033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 14385173 - 14385064
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||  |||||||| |||  |  |||||||||||||||||| |||    
T  14385173 atagattaaatttgaagatttcatgtaaaccctccaaattcctcctccaatataatttttgagttcccccaaactacaagggtttaatattatgaataaa 14385074  T
Q  116 agttaacccc 125  Q
    | | ||||||    
T  14385073 aatgaacccc 14385064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 173
Target Start/End: Original strand, 1270695 - 1270856
Alignment:
Q  21 ttaaatttgaagaattcatataaaccctccaaaatc----------ctcctccaatataattttct-agttccccaaaatgaggagggtttaatattatg 109  Q
    ||||||||||||||||||||||||||||||||||||          ||| | ||||| |||||| | ||||||||||| |||||||| ||||  ||||||    
T  1270695 ttaaatttgaagaattcatataaaccctccaaaatctctcaaaaccctcattcaatacaatttttttagttccccaaa-tgaggagg-tttagcattatg 1270792  T
Q  110 aagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatt 173  Q
    || | ||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||    
T  1270793 aatataagttaaccccccaaaaccctcttcttccattttcctcgatttcttccacttgctcatt 1270856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 39205110 - 39204963
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaa----------tcctcctccaatataattttctagttcccca-aaatgaggagggtttaata 104  Q
    ||||||||||||| |||||||||||||||||||||||||          ||||||||||||| |||||| |||||||||  |||||||||||||||| ||    
T  39205110 atagattaaatttcaagaattcatataaaccctccaaaaacccctaaaatcctcctccaatacaattttttagttccccccaaatgaggagggtttagta 39205011  T
Q  105 ttatgaagaaaagttaaccccacaaaaccctcctcttccattttcctc 152  Q
    ||||| | ||||||||||||  |||| |||||| |||| |||||||||    
T  39205010 ttatggaaaaaagttaacccgccaaagccctccccttctattttcctc 39204963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 187
Target Start/End: Original strand, 28539414 - 28539594
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatc----------ctcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    |||||||||||||||||||||||||||||||||||||||||          ||| ||||||| |||||| ||| ||||| |||||||||| |||||  ||    
T  28539414 atagattaaatttgaagaattcatataaaccctccaaaatcccccaaagctctcatccaatacaattttttag-tcccccaaatgaggagagtttagcat 28539512  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaag 187  Q
    ||||||||||||||||| || || | |||||| || |||||||||    ||||||| || |||||||| |||||||| ||||    
T  28539513 tatgaagaaaagttaactccccagagccctcccctcccattttccaatatttcttcgacatgctcattacttttttcccaag 28539594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 43190537 - 43190686
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||| |||| | || ||| |||||| ||||| ||||||  | |||| | |||||| ||| ||||  |||||||||||||    
T  43190537 atagattaaatttgaagaattcatacaaactcccccaaaccctccttcaatacaatttttgatttcctccaaatgatgagagttttgtattatgaagaaa 43190636  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaactt 166  Q
    |||||||||| | ||||||||| || |||||||||||  ||||||| ||||    
T  43190637 agttaacccctc-aaaccctcccctcccattttcctctatttcttccactt 43190686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 16813717 - 16813611
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||| ||||||| |||||||||||||||||  ||||||||||| |||||| |||||   | |||| ||||| ||||| |||||||||||||    
T  16813717 atagattaaatttaaagaatttatataaaccctccaaaactctcctccaatacaattttttagtttttc-aaataaggagagtttagtattatgaagaaa 16813619  T
Q  116 agttaacc 123  Q
    ||||||||    
T  16813618 agttaacc 16813611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 16 - 123
Target Start/End: Complemental strand, 16852996 - 16852890
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||| ||||||| |||||||||||||||||  ||||||||||| |||||| |||||   | |||| ||||| ||||| |||||||||||||    
T  16852996 atagattaaatttaaagaatttatataaaccctccaaaactctcctccaatacaattttttagtttttc-aaataaggagagtttagtattatgaagaaa 16852898  T
Q  116 agttaacc 123  Q
    ||||||||    
T  16852897 agttaacc 16852890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 30072466 - 30072572
Alignment:
Q  76 tagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttc 175  Q
    ||||||||  ||||||||| | | || ||||||||||||||||||||||| |||| |||||| || |||||||||||  ||||||| ||||||||||| |    
T  30072466 tagttccctcaaatgaggatgatatagtattatgaagaaaagttaacccctcaaagccctcccctcccattttcctctatttcttccacttgctcattcc 30072565  T
Q  176 ttttttc 182  Q
    |||||||    
T  30072566 ttttttc 30072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 125
Target Start/End: Original strand, 5322122 - 5322226
Alignment:
Q  21 ttaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtta 120  Q
    ||||||||||| |||||||||||||||||||||| |||  ||||||| | ||||  |||||||| ||||||||||| |||  |||||||||||||| | |    
T  5322122 ttaaatttgaataattcatataaaccctccaaaacccttttccaatacagtttttgagttcccccaaatgaggaggattttgtattatgaagaaaaatga 5322221  T
Q  121 acccc 125  Q
    |||||    
T  5322222 acccc 5322226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 39913334 - 39913267
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaa 87  Q
    ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||  |||||||||||    
T  39913334 attaaatttaaaaaattcatgtaaaccctccaaaatcctcctccaatataatttttgagttccccaaa 39913267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 31584790 - 31584863
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||| ||||||||||||| |||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||    
T  31584790 aaaccccccaaaatcctccttcaatataattttttagttcccc-aaatgaggagggttttatattttgaagaaaa 31584863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 40212060 - 40211876
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||| ||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||  ||| ||  |  | |||||||||     
T  40212060 aaaccccccaaaaccctcatccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaatataa-ccatccgagccctcctctc 40211962  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    |||||||||||  ||||||| ||||  | ||| |||||||||||| ||| ||  | ||||| ||| |||||||  |||||||||||    
T  40211961 ccattttcctctatttcttccacttaattattccttttttctcaaaccttcccatcccttctcctccaaactcacaaacaaagcct 40211876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 92
Target Start/End: Complemental strand, 13767511 - 13767436
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgag 92  Q
    ||||||| |||||||| ||||||||||||||| |||||||||||| |||||| |||||| ||||||||| |||||||    
T  13767511 atagattgaatttgaaaaattcatataaacccgccaaaatcctcc-ccaatacaattttttagttcccccaaatgag 13767436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 12941822 - 12941896
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||| ||||||||  |||||||||||||||||||||||||||| ||||||| ||| ||| ||||| |||||||||    
T  12941822 aaactctccaaaactctcctccaatataattttctagttcccccaaatgagaaggattttatattttgaagaaaa 12941896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 80 - 190
Target Start/End: Complemental strand, 18590098 - 18589988
Alignment:
Q  80 tccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttctttt 179  Q
    ||||| ||| |||||| ||||| |||||||||||| ||||||| || ||||||||||| || |||||||||||  ||||||| | ||||||||| || ||    
T  18590098 tcccccaaaagaggagagtttagtattatgaagaacagttaacaccccaaaaccctcccctcccattttcctctatttcttccatttgctcattcctgtt 18589999  T
Q  180 ttctcaagcct 190  Q
    ||  |||||||    
T  18589998 tttccaagcct 18589988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 30312397 - 30312497
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||| |||||||  ||||||| || |||||||||||| |||||| |||||| ||||| |||||| ||||||||| |||||||| || |||  |||||||    
T  30312397 aataacatagattggatttgaaaaaatcatataaaccccccaaaaccctccttcaatacaattttttagttcccccaaatgagggggattttttattatg 30312496  T
Q  110 a 110  Q
    |    
T  30312497 a 30312497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 25292259 - 25292204
Alignment:
Q  19 gattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||||||||||| |||||||||||||| ||| ||||||| |||||||||||||||    
T  25292259 gattaaatttgaaaaattcatataaaccttccgaaatcctactccaatataatttt 25292204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 116
Target Start/End: Original strand, 9087489 - 9087562
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||| ||||||||||||||| ||| ||||||  |||||||| ||||||||||||||| ||||| |||||||||    
T  9087489 aaaccccccaaaatcctcctccgatacaatttttcagttcccc-aaatgaggagggttttatattttgaagaaaa 9087562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 36642387 - 36642524
Alignment:
Q  50 caaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttc 149  Q
    ||||||||||||||||   | |||| ||||||||  ||||||||||| |||  ||| ||||||||||||||||| | |||| ||||  ||| |||||||     
T  36642387 caaaatcctcctccaa---atttttttagttccctcaaatgaggaggattttgtataatgaagaaaagttaacctcccaaagcccttatctcccattttt 36642483  T
Q  150 ctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    ||   ||||||||||||| ||||| |||||||  |||||||    
T  36642484 ctttatttcttcaacttgttcattcctttttttccaagcct 36642524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 30523296 - 30523176
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    ||||||||||||||||||| |||||| ||||||||| |||| || ||| |||  |||||||||||||| |||||||  ||||| |||||  | ||||| |    
T  30523296 ccaaaatcctcctccaatacaattttttagttcccc-aaattagaaggattttgtattatgaagaaaatttaacccaccaaaatcctcccttcccattgt 30523198  T
Q  149 cctcgttttcttcaacttgctc 170  Q
    ||||  ||| ||| ||||||||    
T  30523197 cctctatttgttccacttgctc 30523176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 230
Target Start/End: Complemental strand, 36870306 - 36870132
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgtt 155  Q
    |||||||||||| |||||| ||||||||| |||||||||||||||  |||| |||||||||  ||| ||||| ||| || |||| |||| | |||||  |    
T  36870306 cctcctccaatacaattttttagttcccccaaatgaggagggttttctattttgaagaaaa-ataatcccaccaaagcc-cctcctccaatgtcctctat 36870209  T
Q  156 ttcttcaacttgctcatt--tcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttag 230  Q
    |||||| |||  ||| ||  | |||||| |||||| |  |  | |||||||||||||||||| ||||||||||||||    
T  36870208 ttcttccactcactccttccttttttttttcaagcatttccttcccttccccttcaaactcgcaaacaaagccttag 36870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 14 - 74
Target Start/End: Original strand, 5002773 - 5002833
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    |||||||||||||||||||||||||| ||| || ||||||| |||| ||||||| ||||||    
T  5002773 atatagattaaatttgaagaattcatgtaagccttccaaaaccctcatccaatacaatttt 5002833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 16519113 - 16519300
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||| | ||||||| |||| || ||| ||||| ||| ||||||||||| |||  |||||||||||||| | |||||  |||| |||||| | |    
T  16519113 aaaccccccaataccctcctctaatacaactttttagtttccccaaatgaggaggattttgtattatgaagaaaaatcaacccaccaaagccctcc-cct 16519211  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttag 230  Q
    ||| | | |||  ||||||| |||||||| || ||||||||  || ||  || ||  |||||||| |||||||| ||||||||||||||    
T  16519212 ccaatgtactctatttcttccacttgctccttccttttttccaaaaccctcccctctcttcccctccaaactcgcaaacaaagccttag 16519300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 121
Target Start/End: Complemental strand, 21834991 - 21834919
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaa 121  Q
    |||||| ||||||| |||| || ||| ||||||||| |||||||||| |||| ||||||||||||||| ||||    
T  21834991 ccaaaaccctcctctaatacaactttttagttcccctaaatgaggagagttttatattatgaagaaaaattaa 21834919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 33206872 - 33206821
Alignment:
Q  23 aaatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||||| ||||||||| ||| | ||||||||||||||||||||||||||||    
T  33206872 aaatttgtagaattcatgtaagctctccaaaatcctcctccaatataatttt 33206821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 567479 - 567441
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  567479 atagattaaatttgaagaattcatgtaaaccctccaaaa 567441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 16625792 - 16625826
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctcc 50  Q
    |||||||||||||||||||||||||||||||||||    
T  16625792 atagattaaatttgaagaattcatataaaccctcc 16625826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 181
Target Start/End: Original strand, 41656711 - 41656804
Alignment:
Q  87 aatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttctttttt 181  Q
    ||||||||| ||||  |||||||||||||| ||||||| ||||||| || | |||||||| ||  |  ||||||| |||||||||||||||||||    
T  41656711 aatgaggagagttttgtattatgaagaaaaattaaccc-acaaaacgcttcccttccattgtctcctatttcttccacttgctcatttctttttt 41656804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 106
Target Start/End: Original strand, 11522172 - 11522267
Alignment:
Q  20 attaaatttgaagaattcatataaaccctcc----------aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatatt 106  Q
    |||||||||||||||||||||||||||||||          |||| |||||||||||| || ||| ||||||||| ||||||||||||||| |||||    
T  11522172 attaaatttgaagaattcatataaaccctcccaaaccccccaaaaccctcctccaatacaactttttagttcccc-aaatgaggagggttttatatt 11522267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 31899341 - 31899385
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    |||||||||| |||||||| ||||||||||||||||||| |||||    
T  31899341 aatatagattgaatttgaaaaattcatataaaccctccataatcc 31899385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 35412213 - 35412249
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatc 56  Q
    |||||||||||||||||||||||||| ||||||||||    
T  35412213 attaaatttgaagaattcatataaactctccaaaatc 35412249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 38216505 - 38216569
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagtt 80  Q
    ||||||| ||||||||||| | || ||||||||||||||||||||| |  ||||||||| |||||    
T  38216505 atagattgaatttgaagaaattatctaaaccctccaaaatcctccttctttataattttttagtt 38216569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 83
Target Start/End: Original strand, 6128842 - 6128908
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccc 83  Q
    |||||||||||||||| ||||||||| |||||||||||||  || ||||||| ||||||  |||||||    
T  6128842 atagattaaatttgaaaaattcatat-aaccctccaaaattttcttccaatacaatttttgagttccc 6128908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 73
Target Start/End: Original strand, 15234851 - 15234910
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattt 73  Q
    ||||||||||||||| || |||| |||||| ||||| |||| |||||||||||| |||||    
T  15234851 atatagattaaatttaaataatttatataagccctcaaaaaccctcctccaatacaattt 15234910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 60
Target Start/End: Complemental strand, 29358813 - 29358770
Alignment:
Q  17 tagattaaatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    ||||||||||||||||||||||| ||||||  ||||||||||||    
T  29358813 tagattaaatttgaagaattcatgtaaacctcccaaaatcctcc 29358770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Original strand, 12286973 - 12287015
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaa 52  Q
    |||||||||||||||||||||||| ||| |||||||| |||||    
T  12286973 aataatatagattaaatttgaagatttcgtataaaccttccaa 12287015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 53
Target Start/End: Original strand, 13961604 - 13961638
Alignment:
Q  19 gattaaatttgaagaattcatataaaccctccaaa 53  Q
    ||||||||||||||| |||||||||||||||||||    
T  13961604 gattaaatttgaagatttcatataaaccctccaaa 13961638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 48
Target Start/End: Original strand, 16465145 - 16465179
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccct 48  Q
    ||||| |||||||||||||||||||||||||||||    
T  16465145 atatatattaaatttgaagaattcatataaaccct 16465179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 26599233 - 26599275
Alignment:
Q  12 taatatagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||||| ||||||||||||||| |||| ||||||||||||||    
T  26599233 taatatacattaaatttgaagaactcatgtaaaccctccaaaa 26599275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 26599280 - 26599366
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccct 135  Q
    |||||| |||||||||||| |||||   |||||||| ||||||||||||  |  |||||||||||||| | |||||| |||| ||||    
T  26599280 ccaaaaccctcctccaatacaatttgtgagttcccccaaatgaggagggaattgtattatgaagaaaaatgaaccccccaaagccct 26599366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 11373768 - 11373857
Alignment:
Q  27 ttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||| || |||  |||| ||||||||||||||||  | |||| ||||||||| |||| ||| || |||  ||||||||||||||    
T  11373768 ttgaagaatttatctaagtcctctaaaatcctcctccaatgcacttttttagttcccccaaatcagggggatttggtattatgaagaaaa 11373857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 46
Target Start/End: Complemental strand, 22101694 - 22101661
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaacc 46  Q
    |||||| |||||||||||||||||||||||||||    
T  22101694 aatataaattaaatttgaagaattcatataaacc 22101661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 30072095 - 30072159
Alignment:
Q  51 aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||| |||||||||||| |||||| |||||| || ||||||||||| ||| ||||| |||||||||    
T  30072095 aaaaccctcctccaatacaatttt-tagttctcccaaatgaggaggattttatattttgaagaaaa 30072159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 45
Target Start/End: Complemental strand, 37217048 - 37217019
Alignment:
Q  16 atagattaaatttgaagaattcatataaac 45  Q
    ||||||||||||||||||||||||||||||    
T  37217048 atagattaaatttgaagaattcatataaac 37217019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Complemental strand, 1726005 - 1725969
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctc 49  Q
    |||||||||| |||||||| |||||||||||||||||    
T  1726005 aatatagattgaatttgaaaaattcatataaaccctc 1725969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 8555761 - 8555797
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctc 49  Q
    |||||||||| |||||||| |||||||||||||||||    
T  8555761 aatatagattgaatttgaaaaattcatataaaccctc 8555797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 41
Target Start/End: Complemental strand, 18590134 - 18590106
Alignment:
Q  13 aatatagattaaatttgaagaattcatat 41  Q
    |||||||||||||||||||||||||||||    
T  18590134 aatatagattaaatttgaagaattcatat 18590106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 49183778 - 49183562
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| |||||| || |||||||||||| ||| |||||||||||||    
T  49183778 atagattaaatttgaagaattcatataaaccctccaaaaccctcctctaatacaattttttagttctcc-aaatgaggagggattagtattatgaagaaa 49183680  T
Q  116 agttaaccccacaaa----accctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaa 211  Q
    |||||||||| ||||     |||||| || ||||||| |||  ||||||| ||||||||||| |||||||| ||| ||| || || | ||||||| ||||    
T  49183679 agttaaccccccaaagccctccctcccctcccatttttctctatttcttccacttgctcattccttttttcccaaaccttcccctccattcccctccaaa 49183580  T
Q  212 ctcggaaacaaagcctta 229  Q
    |||  |||||||||||||    
T  49183579 ctcacaaacaaagcctta 49183562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 25 - 224
Target Start/End: Original strand, 50535108 - 50535308
Alignment:
Q  25 atttgaagaattcatataaaccctccaaaa-tcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaacc 123  Q
    |||||||||||||||||||||||||||||| |||| |||||||| |||||| ||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  50535108 atttgaagaattcatataaaccctccaaaaatccttctccaatacaattttttagttcccctaaatgaggagggtttagtattatgaagtaaagttaacc 50535207  T
Q  124 ccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaa 223  Q
    || |||| || | |  || ||||||||||  ||||||| | ||||||||| ||||||||||| | || |  || |||||||||||||||||| |||||||    
T  50535208 cctcaaagcctttccttttcattttcctctatttcttctatttgctcattccttttttctcatgtcttctcctcccttccccttcaaactcgcaaacaaa 50535307  T
Q  224 g 224  Q
    |    
T  50535308 g 50535308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 16 - 231
Target Start/End: Complemental strand, 3537299 - 3537076
Alignment:
Q  16 atagattaaatttgaagaattcatata--------aaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatatta 107  Q
    |||||||||||||||||||||||||||        || || ||||||  ||||||||||| |||||| ||||||||| |||||||||||||||  |||||    
T  3537299 atagattaaatttgaagaattcatataccctctaaaaacccccaaaactctcctccaatacaattttttagttcccccaaatgaggagggttttgtatta 3537200  T
Q  108 tgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccctt 207  Q
    |||||||||||||||| | |||| |||||| || |||||||||||  ||||||| |||| |||||| ||||||||| |||||| || || |||||||||     
T  3537199 tgaagaaaagttaacctcccaaagccctcccctcccattttcctctatttcttccacttactcattccttttttctaaagccttcccctcccttcccctc 3537100  T
Q  208 caaactcggaaacaaagccttaga 231  Q
    |||||||| |||||||| ||||||    
T  3537099 caaactcgcaaacaaagtcttaga 3537076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 190
Target Start/End: Complemental strand, 38639668 - 38639498
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| |||||||||||| |||||||||||| |||||| ||||||| | |||||||||||||||  |||||||||||||||||    
T  38639668 attaaatttgaagaattcttattaaccctccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtt 38639569  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    |||||| ||||||| |||||| |||||||||||  ||||||| |||| || |||  ||||||| |||||||    
T  38639568 aaccccccaaaaccttcctctcccattttcctctatttcttccacttacttattctttttttcccaagcct 38639498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 53664601 - 53664763
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||||||||||||| ||| ||||||| |||| |||||||||||| |||||| ||||||| | |||||||||||||||  |||||||||||||||||    
T  53664601 attaaatttgaagaattcttattaaccctcgaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtt 53664700  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||| ||||  ||||||||  ||||||| ||  ||||||| ||||||||||| ||||||||    
T  53664701 aacccctcaaagtcctcctctctcattttcttctatttcttccacttgctcattccttttttc 53664763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 37674141 - 37674312
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||| ||||| ||| |||||||||||| |||||   |||| |||||| ||||||| |||||||||||||||||  ||| |||||||||    
T  37674141 atagattaaatttgaaaaattcttattaaccctccaaaaccctcc---aatacaattttttagttcctcaaaatgaggagggttttgtatcatgaagaaa 37674237  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    |||||||||| |||| ||||||||| ||||||||||   ||||||| |||||||| || |||||||| |||||||    
T  37674238 agttaaccccccaaagccctcctctcccattttcctttatttcttccacttgctcgttccttttttcccaagcct 37674312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 181
Target Start/End: Complemental strand, 44400792 - 44400628
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    |||||||||||||||| ||||| ||| |||||| ||||| |||||||||||| |||||| ||||||  | |||||| ||||||||  ||| |||||||||    
T  44400792 atagattaaatttgaaaaattcttattaaccctacaaaaccctcctccaatacaattttttagttcgtccaaatgaagagggttttgtatcatgaagaaa 44400693  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttctttttt 181  Q
    |||||||||| |||| ||||||||| ||||||||||   ||||||| ||||||||||| |||||||    
T  44400692 agttaacccc-caaagccctcctctcccattttcctttatttcttccacttgctcattcctttttt 44400628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 227
Target Start/End: Original strand, 25754104 - 25754309
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagtt 119  Q
    |||||||| ||||||||| ||| ||||| ||||||||||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||     
T  25754104 attaaattcgaagaattcttattaaccccccaaaatcctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagtc 25754203  T
Q  120 aaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaa 219  Q
    |||||  |||| ||||||||| ||||| |||||  ||||||  |||| || ||| |||||||  |||| || || || ||||| | | |||||||| |||    
T  25754204 aaccc--caaagccctcctctcccattatcctctatttctttcacttacttattcctttttttccaagacttcccctcccttctcatccaaactcgcaaa 25754301  T
Q  220 caaagcct 227  Q
    ||||||||    
T  25754302 caaagcct 25754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 190
Target Start/End: Original strand, 33944664 - 33944811
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||||||||| |||||| ||||||| | |||||||||||||||  ||||||||||||||||||||||| |||| |||||||||     
T  33944664 aaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccc-caaagccctcctctc 33944762  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    |||||||||||  ||||||| |||| || ||| |||||||| |||||||    
T  33944763 ccattttcctctatttcttccacttacttattccttttttcccaagcct 33944811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 1132923 - 1133137
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||||||| ||||||  ||||||||||||||||||| ||||  |||||||||| ||    
T  1132923 atagattaaatttaaagaattcatgtaaaccctccaaaaccctcctccaatacaatttttgagttccccaaaatgaggagagttttgtattatgaagtaa 1133022  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctc--aagcctccctctaccttccccttcaaact 213  Q
    | | |||||| ||||||| ||| ||  || | || ||  |||| || ||||||||||| ||||||| ||  || ||  || || ||||||||| ||||||    
T  1133023 aatgaacccc-caaaaccttcccctctcaatgtcatctatttcgtccacttgctcattccttttttttccaaacccctcccctcccttcccctacaaact 1133121  T
Q  214 cggaaacaaagcctta 229  Q
    || |||||||||||||    
T  1133122 cgcaaacaaagcctta 1133137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 45570976 - 45571086
Alignment:
Q  51 aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcc 150  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| | |||||| || | |||||| ||||||||||||    
T  45570976 aaaatcctcctccaatacaattttttagttcccccaaatgaggagggtttaatattatgaagaaaaatgaaccccccatagccctccccttccattttcc 45571075  T
Q  151 tcgttttcttc 161  Q
    ||  |||||||    
T  45571076 tctatttcttc 45571086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 47359402 - 47359293
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataa-ttttctagttccccaaaatgaggagggtttaatattatgaagaa 114  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| || || |||| ||||| ||| ||| |||||||||||| ||||||||||||    
T  47359402 atagattaaatttgaagaattcatataaaccctccaaaaccctcctccactacaatttttttagtttccc-aaacgaggagggtttagtattatgaagaa 47359304  T
Q  115 aagttaacccc 125  Q
    |||||||||||    
T  47359303 aagttaacccc 47359293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 43 - 229
Target Start/End: Original strand, 48908899 - 48909084
Alignment:
Q  43 aaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttc 142  Q
    ||||| |||||| ||||||||||||||||||| ||||||| | |||| | ||||||||  ||||||||||||||||||||||| |||| || |||||| |    
T  48908899 aaccccccaaaaccctcctccaatataattttttagttcctccaaattatgagggttttgtattatgaagaaaagttaacccc-caaagccttcctctcc 48908997  T
Q  143 cattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcctta 229  Q
    ||||||||||  ||||||| |||| || |||  ||||||  |||| || || || ||||||||| |||||| | |||||||||||||    
T  48908998 cattttcctctatttcttccacttacttattcttttttttccaagtcttcccctcccttcccctccaaacttgcaaacaaagcctta 48909084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 13 - 122
Target Start/End: Complemental strand, 35989202 - 35989094
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaag 112  Q
    |||||||||||||||||||||||||||||||| ||| |||||  |||||| |||| |||||| ||||||||| |||| ||||||||||||||||||||||    
T  35989202 aatatagattaaatttgaagaattcatataaatccttcaaaactctcctctaatacaattttttagttcccc-aaattaggagggtttaatattatgaag 35989104  T
Q  113 aaaagttaac 122  Q
    || |||||||    
T  35989103 aatagttaac 35989094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 33908973 - 33909112
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||||||||| || ||| ||||| ||| |||||||||||||||  ||||||||||||||||||| ||| |||| ||||||| |     
T  33908973 aaaccccccaaaaccctcctccaatacaactttttagtttccccaaatgaggagggttttgtattatgaagaaaagttaatcccccaaagccctcct-tc 33909071  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||||||||  ||||||| ||||||||||| ||||||||    
T  33909072 ccattttcctctatttcttccacttgctcattccttttttc 33909112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 5939812 - 5939950
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccatttt 148  Q
    |||||| |||||||||||| | |||| ||||||| | ||||||||| | |||  ||||||||||||||||||||||| ||||||| || ||| |||||||    
T  5939812 ccaaaaccctcctccaatacagttttgtagttcctccaaatgaggaagattttgtattatgaagaaaagttaaccccccaaaaccttcatctcccatttt 5939911  T
Q  149 cctcgttttcttcaacttgctcatttcttttttctcaag 187  Q
    ||||  ||||||| ||||||||||| |||||||| ||||    
T  5939912 cctctatttcttccacttgctcattccttttttcccaag 5939950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 51 - 182
Target Start/End: Complemental strand, 50948254 - 50948122
Alignment:
Q  51 aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaa-ccctcctcttccattttc 149  Q
    |||| |||||||||||| |||||| ||||||| | || ||||||||||||  ||||||||||||||||||||||  ||||| ||||||||| ||||||||    
T  50948254 aaaaccctcctccaatacaattttttagttcctccaactgaggagggttttgtattatgaagaaaagttaaccctccaaaagccctcctctcccattttc 50948155  T
Q  150 ctcgttttcttcaacttgctcatttcttttttc 182  Q
     ||  ||||||| || |||||||| ||||||||    
T  50948154 ttctatttcttccacatgctcattccttttttc 50948122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 40118885 - 40119003
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||| ||||||||||||||||||| ||||||||||||| |||||   |||| |||||| ||||||||| |||||||||||||||  | | |||||||||    
T  40118885 atagaataaatttgaagaattcatacaaaccctccaaaaccctcc---aatacaattttttagttcccccaaatgaggagggttttgtttaatgaagaaa 40118981  T
Q  116 agttaaccccacaaaaccctcc 137  Q
    | |||||||| |||| ||||||    
T  40118982 aattaaccccccaaagccctcc 40119003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 227
Target Start/End: Original strand, 517656 - 517838
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||| ||||| ||||||  |||||||| |||||||||||||||  |||||||||||||| |||||||  |||| |||| ||||     
T  517656 aaaccccccaaaaccctccttcaatacaattttg-agttcccccaaatgaggagggttttgtattatgaagaaaaattaaccc--caaagcccttctctc 517752  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
    | |||||||||  ||||||| ||||||| | | ||||||   |||||||  | || ||||||||| |||||||| |||||||||||    
T  517753 ctattttcctctatttcttccacttgcttagtcctttttcaccaagcctttccctcccttcccctccaaactcgcaaacaaagcct 517838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 10 - 107
Target Start/End: Original strand, 39114946 - 39115041
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatatta 107  Q
    ||||| ||||||| |||||||||||||||||||||||||| ||| ||||||||||||| |||||   ||||||||||||| |||||| ||| ||||||    
T  39114946 aataacatagattgaatttgaagaattcatataaaccctctaaagtcctcctccaatacaattt--gagttccccaaaattaggaggattttatatta 39115041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 35283176 - 35282960
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||||| ||||||||||||||||||||||| ||| ||          |||||||||| |||||| ||||||||| ||||||||||||||| ||||| ||    
T  35283176 attaaatatgaagaattcatataaaccctcccaaacccctcaaaaccttcctccaatacaattttttagttcccccaaatgaggagggttttatattttg 35283077  T
Q  110 aagaaaagttaaccccacaaaac-cctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttc 208  Q
    ||||||| |||||||| |||| | |||||||  ||| |   |||  ||||||| |||||||| || |||||| |  || |||||| || ||||||||| |    
T  35283076 aagaaaaattaaccccccaaagctcctcctc--ccaatgatctctatttcttccacttgctccttcctttttaccaaaccctccc-cttccttcccctcc 35282980  T
Q  209 aaactcggaaacaaagcctt 228  Q
    ||||||| ||||||||||||    
T  35282979 aaactcgcaaacaaagcctt 35282960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 182
Target Start/End: Complemental strand, 27197350 - 27197170
Alignment:
Q  11 ataatatagattaaatttgaagaattcatataaaccctc----------caaaatcctcctccaatataattttct-agttccccaaaatgaggagggtt 99  Q
    |||| ||| ||||||||||||||||||||||||||||||          ||||| |||| ||||||| |||||| | |||||| |||| |||||||||||    
T  27197350 ataacataaattaaatttgaagaattcatataaaccctcaaaaaaaccccaaaaccctcatccaatacaatttttttagttcctcaaa-tgaggagggtt 27197252  T
Q  100 taatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |  |||||||||||| |||||||||| ||||||||||| || |||||||||||  ||| |||  ||||||||||  |||||||    
T  27197251 ttgtattatgaagaatagttaacccc-caaaaccctcccctcccattttcctctattttttccccttgctcattcattttttc 27197170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 51686595 - 51686484
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    |||||||||||| |||||||||||||||||||||| ||          |||||||||| |||||| |||||||||||| ||||| ||||||| |||||||    
T  51686595 attaaatttgaaaaattcatataaaccctccaaaacccccaaaaaccctcctccaatacaattttttagttccccaaa-tgaggggggtttagtattatg 51686497  T
Q  110 aagaaaagttaac 122  Q
    |||||||||||||    
T  51686496 aagaaaagttaac 51686484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 124
Target Start/End: Complemental strand, 22225405 - 22225341
Alignment:
Q  60 ctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccc 124  Q
    ||||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||| |||||||    
T  22225405 ctccaatataattttttagttcccctaaatgaggagagtttagtattatgaagaaaaattaaccc 22225341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 33281709 - 33281804
Alignment:
Q  21 ttaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||||||||||||| |||||||  |||||||||| ||||||| ||||||  ||||||   ||||||||||| ||| |||||||||| ||||    
T  33281709 ttaaatttgaagaattcatttaaacccctcaaaatcctcttccaatacaatttttgagttcctataaatgaggaggattttatattatgaaaaaaa 33281804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 10 - 182
Target Start/End: Original strand, 34729319 - 34729489
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    ||||| ||| ||||||||| |||||||||||||||||||| |||  ||| |||||||| | ||||  | ||| |  | |||||||| |||| ||| | ||    
T  34729319 aataacatatattaaattttaagaattcatataaaccctcaaaa--cctgctccaatacagtttttgaattctcgcagatgaggagagttttatactgtg 34729416  T
Q  110 aagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    ||||||| |||||| |  ||||| ||||||||| ||||||||    |||||| |||||||||||| |||||||    
T  34729417 aagaaaaattaaccaccaaaaacactcctcttcaattttcctgtacttcttccacttgctcattttttttttc 34729489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 15499323 - 15499407
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaacccca 126  Q
    ||||||||||||||| |||||||||| ||||||  ||||| || ||||||||| | |||  |||||||||||||||| |||||||    
T  15499323 aaaccctccaaaatcatcctccaatacaatttttgagttctcccaaatgaggaagattttgtattatgaagaaaagtgaacccca 15499407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 24 - 116
Target Start/End: Original strand, 24588289 - 24588381
Alignment:
Q  24 aatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||||||| |||||||||||||| | ||| |||||| ||||||  |||||| | |||||||| || |||  ||||||||||||||    
T  24588289 aatttgaagaattcatttaaaccctccaaaaccatcccccaatacaatttttgagttcctccaaatgagggggattttgtattatgaagaaaa 24588381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 34306691 - 34306623
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttcccc 84  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||| |||||| ||||||  ||||||||    
T  34306691 atagattgaatttgaaaaattcatataaaccctccaaaaccctcccccaatacaatttttgagttcccc 34306623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 52620827 - 52620903
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagg 96  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||||| ||||||  ||||| || |||||||||||    
T  52620827 attaaatttgaagaattcatattaacccctcaaaaccctcctccaatacaatttttgagttctcccaaatgaggagg 52620903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 38401901 - 38402008
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtt-taatattat 108  Q
    ||||||||| ||||||||||||||||| ||| ||||| || || |  ||| ||||||| |||||| ||||||||| |||||| || |||| ||||||| |    
T  38401901 aataatatatattaaatttgaagaatttatacaaaccttctaagactctcatccaatacaattttttagttcccctaaatgacgaaggttctaatatttt 38402000  T
Q  109 gaagaaaa 116  Q
    ||||||||    
T  38402001 gaagaaaa 38402008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 41099716 - 41099931
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccc--------tccaaaatcct-cctccaatataattttctagttccccaaaatgaggagggtttaatatt 106  Q
    |||||||||||||||| |||| ||||||||||        ||||||| ||| ||||||||| |||||| |||||| || |||| ||||||||||  ||||    
T  41099716 atagattaaatttgaaaaatttatataaaccccgtaaaattccaaaaaccttcctccaatacaatttt-tagttctcccaaataaggagggttttgtatt 41099814  T
Q  107 atgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttcccct 206  Q
     ||||||||||||||||||  |||  ||||| ||| ||||||| ||  || |||  |||| | |||| ||||||| |||||| | || ||   |||||||    
T  41099815 gtgaagaaaagttaaccccttaaagtcctcccctttcattttcttctattactttcacttacacattccttttttttcaagcattcccctctattcccct 41099914  T
Q  207 tcaaactcggaaacaaa 223  Q
    ||||||||| |||||||    
T  41099915 tcaaactcgcaaacaaa 41099931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 53888576 - 53888470
Alignment:
Q  20 attaaatttgaagaattcatataaaccctcc----------aaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    |||||||||||||||||||||||||||||||          |||| |||||||||||| |||||| ||||||||| |||  |||||||||| ||||| ||    
T  53888576 attaaatttgaagaattcatataaaccctcccaaaccccccaaaaccctcctccaatacaattttttagttcccccaaacaaggagggttttatattttg 53888477  T
Q  110 aagaaaa 116  Q
    |||||||    
T  53888476 aagaaaa 53888470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 227
Target Start/End: Complemental strand, 32858923 - 32858701
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    ||||||||||||||| |||||||| |||||||||||||| ||          ||||| |||| ||||||  |||||||| ||||||||||| ||| ||||    
T  32858923 atagattaaatttgatgaattcatgtaaaccctccaaaaccccccaaaactctcctcgaatacaatttttgagttcccccaaatgaggaggattttatat 32858824  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctc--aagcctccctctaccttcc 203  Q
    ||||||||||| | |||||| |||| || | | ||  || | || ||  ||||||| ||||||||||| ||||||| ||  || ||  || || ||||||    
T  32858823 tatgaagaaaaatgaacccc-caaagcctttccctctcaatgtcatctatttcttccacttgctcattccttttttttccaaacccctccccttccttcc 32858725  T
Q  204 ccttcaaactcggaaacaaagcct 227  Q
    ||| |||||||| |||||||||||    
T  32858724 cctccaaactcgcaaacaaagcct 32858701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 16 - 87
Target Start/End: Complemental strand, 2420752 - 2420682
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaa 87  Q
    ||||||| |||||||| ||||||||||||||||||||||  |||| |||||| ||||||  |||||||||||    
T  2420752 atagattgaatttgaaaaattcatataaaccctccaaaactctcc-ccaatacaatttttgagttccccaaa 2420682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 3333953 - 3333916
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcc 57  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  3333953 attaaatttgaagaattcatataaaccctcccaaatcc 3333916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 44979461 - 44979404
Alignment:
Q  57 ctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaa 114  Q
    ||||||||||| |||||| ||||||||| |||| ||| || |||||||||||||||||    
T  44979461 ctcctccaatacaattttttagttcccccaaattagggggatttaatattatgaagaa 44979404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 181
Target Start/End: Original strand, 1339881 - 1340061
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaa---------ccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggttt 100  Q
    ||||| |||||||||||||||||||||||| ||||         |||||||||| | || ||||||| ||||||  ||||||   |||||| ||| |||     
T  1339881 aataaaatagattaaatttgaagaattcatgtaaatccttcaaaccctccaaaaccttcttccaatacaatttttgagttccttcaaatgatgagagtta 1339980  T
Q  101 aatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttctttttt 181  Q
      |||||||||||||| ||||||||   || |||||||| | ||||||| || |||| ||| ||||| ||||| |||||||    
T  1339981 tgtattatgaagaaaaattaaccccctgaagccctcctccttcattttcttctttttattccacttgttcattcctttttt 1340061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 46312408 - 46312452
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||    
T  46312408 atagattgaatttgaaaaattcatataaaccctccataatcctcc 46312452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 48370181 - 48370249
Alignment:
Q  20 attaaatttgaagaattcatataaaccct-ccaaaatcctcctccaatataattttctagttccccaaa 87  Q
    |||||||||||| |||||||||||| ||| |||||||||| |||| ||| ||||||  |||||||||||    
T  48370181 attaaatttgaaaaattcatataaatcctcccaaaatccttctccgatacaatttttgagttccccaaa 48370249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 48444601 - 48444490
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccct---------ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaat 103  Q
    |||||| ||||||||||| |||||||||||||||||         |||||| |||| ||||||| |||||| ||| ||||| ||||||||| ||||| ||    
T  48444601 aatatatattaaatttgaggaattcatataaaccctcccagacacccaaaaccctcatccaatacaattttttagatcccc-aaatgaggaaggttttat 48444503  T
Q  104 attatgaagaaaa 116  Q
    ||| |||||||||    
T  48444502 attttgaagaaaa 48444490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 16883438 - 16883330
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaa--aatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaaga 113  Q
    |||||||||||||||||||||||||||||  || |||  || || ||||||||| |||||| | ||| ||| ||| ||||||| |||  |||||||||||    
T  16883438 atagattaaatttgaagaattcatataaaatcttcaatcaaacc-cctccaatacaatttttttgtttccc-aaacgaggaggatttggtattatgaaga 16883341  T
Q  114 aaagttaaccc 124  Q
    ||| |||||||    
T  16883340 aaaattaaccc 16883330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 47076896 - 47076939
Alignment:
Q  13 aatatagattaaatttgaagaattcatataaaccctccaaaatc 56  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  47076896 aatatagattgaatttgaataattaatataaaccctccaaaatc 47076939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 54877995 - 54878038
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctc 59  Q
    ||||||||||||||||||||| ||||||||||| ||||| ||||    
T  54877995 atagattaaatttgaagaatttatataaacccttcaaaaccctc 54878038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 7435656 - 7435721
Alignment:
Q  59 cctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaacccc 125  Q
    ||||||||| |||||| |||||| ||| | |||||||| ||| ||||||||||||||||||| ||||    
T  7435656 cctccaatacaattttttagttctccaga-tgaggaggattttatattatgaagaaaagttagcccc 7435721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 16 - 46
Target Start/End: Original strand, 28569512 - 28569542
Alignment:
Q  16 atagattaaatttgaagaattcatataaacc 46  Q
    |||||||||||||||||||||||||||||||    
T  28569512 atagattaaatttgaagaattcatataaacc 28569542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 50
Target Start/End: Complemental strand, 29623325 - 29623295
Alignment:
Q  20 attaaatttgaagaattcatataaaccctcc 50  Q
    |||||||||||||||||||||||||||||||    
T  29623325 attaaatttgaagaattcatataaaccctcc 29623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 74
Target Start/End: Complemental strand, 53620338 - 53620288
Alignment:
Q  24 aatttgaagaattcatataaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||| || ||||||||||||||||| ||||||||| ||||||| ||||||    
T  53620338 aattttaataattcatataaaccctctaaaatcctcatccaatacaatttt 53620288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 2927929 - 2927868
Alignment:
Q  22 taaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccc 83  Q
    ||||||| |||| ||||||||||||| |||||| | || ||||||| |||||| ||||||||    
T  2927929 taaatttaaagagttcatataaaccccccaaaaccatcttccaatacaattttttagttccc 2927868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 116
Target Start/End: Complemental strand, 11500144 - 11500087
Alignment:
Q  59 cctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    ||||||||| |||||| |||||  || |||||||||||||||  ||||||||||||||    
T  11500144 cctccaatacaattttttagttatcccaaatgaggagggttttctattatgaagaaaa 11500087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 21856103 - 21856022
Alignment:
Q  49 ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaa 130  Q
    ||||||||||||| ||||| || ||| ||||||||| |||| | | || |||  |||||||||||||| | |||||||||||    
T  21856103 ccaaaatcctccttcaatacaaatttttagttcccccaaattaaggggattttgtattatgaagaaaactaaaccccacaaa 21856022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Complemental strand, 42668109 - 42668076
Alignment:
Q  41 taaaccctccaaaatcctcctccaatataatttt 74  Q
    ||||||||||||||||||||||||||| ||||||    
T  42668109 taaaccctccaaaatcctcctccaatacaatttt 42668076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 3458324 - 3458383
Alignment:
Q  56 cctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaa 116  Q
    |||||||||||| |||||| ||||||||| ||| ||||| ||||| ||||| |||||||||    
T  3458324 cctcctccaatacaattttttagttcccc-aaacgaggacggttttatattttgaagaaaa 3458383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 19793445 - 19793489
Alignment:
Q  10 aataatatagattaaatttgaagaattcatataaaccctccaaaa 54  Q
    ||||| ||||||||||||||||||| | ||| |||||||||||||    
T  19793445 aataacatagattaaatttgaagaacttatacaaaccctccaaaa 19793489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 118
Target Start/End: Original strand, 31651469 - 31651545
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagt 118  Q
    |||||| | ||||| ||| ||||||| ||||||  ||||  |||||||||||||| |||  ||||||||||||||||    
T  31651469 aaaccccctaaaattctcatccaatacaatttttaagttttccaaaatgaggaggattttgtattatgaagaaaagt 31651545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 45555731 - 45555691
Alignment:
Q  11 ataatatagattaaatttgaagaattcatataaaccctcca 51  Q
    |||| ||||||| |||||||| |||||||||||||||||||    
T  45555731 ataacatagattgaatttgaaaaattcatataaaccctcca 45555691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 47714661 - 47714705
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    ||||||| |||||||| ||||||||||||||||||| || |||||    
T  47714661 atagattgaatttgaaaaattcatataaaccctccataaccctcc 47714705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 47789583 - 47789658
Alignment:
Q  155 tttcttcaacttgctcatttcttttttct-caagcctccctctaccttccccttcaaactcggaaacaaagccttag 230  Q
    ||||||| |||||||| || ||||||||| ||| |||||| || ||||||||| |||||||  ||||||||||||||    
T  47789583 tttcttccacttgctccttccttttttctacaaccctccc-ctcccttcccctccaaactcccaaacaaagccttag 47789658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 50201651 - 50201615
Alignment:
Q  24 aatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  50201651 aatttgaagaattcttataaactctccaaaatcctcc 50201615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 54372572 - 54372608
Alignment:
Q  24 aatttgaagaattcatataaaccctccaaaatcctcc 60  Q
    |||||||||||||||||||||||||| |||| |||||    
T  54372572 aatttgaagaattcatataaaccctctaaaaccctcc 54372608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 48
Target Start/End: Complemental strand, 54748343 - 54748315
Alignment:
Q  20 attaaatttgaagaattcatataaaccct 48  Q
    |||||||||||||||||||||||||||||    
T  54748343 attaaatttgaagaattcatataaaccct 54748315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 42 - 227
Target Start/End: Complemental strand, 26437 - 26251
Alignment:
Q  42 aaaccctccaaaatcctcctccaa-tataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctct 140  Q
    |||||| |||||| |||||||||| || |||||| ||||||| | |||||||||||||||  |||||||||||||||||| |||| |||| |||||||||    
T  26437 aaaccccccaaaaccctcctccaaatacaattttttagttcctccaaatgaggagggttttgtattatgaagaaaagttatccccccaaagccctcctct 26338  T
Q  141 tccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagcct 227  Q
     |||||||||||  ||||||| |||| || ||| |||||||| ||||||| || || |||||||||||||||||| |||||||||||    
T  26337 cccattttcctctatttcttccacttacttattccttttttcccaagccttcccctcccttccccttcaaactcgtaaacaaagcct 26251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 58 - 230
Target Start/End: Original strand, 2063 - 2234
Alignment:
Q  58 tcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgtttt 157  Q
    |||||||||| ||||||  |||||| | |||||||||||||||  ||||||||||||||||||||||| |||| ||||||||| |||||||| ||  |||    
T  2063 tcctccaatacaatttttcagttcctccaaatgaggagggttttgtattatgaagaaaagttaacccc-caaagccctcctctcccattttcttctattt 2161  T
Q  158 cttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttag 230  Q
    |||| ||||||||||| ||||||||| |||||| || || ||||||||| |||||| | ||||||||||||||    
T  2162 cttccacttgctcattccttttttcttaagccttcccctcccttcccctccaaacttgcaaacaaagccttag 2234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 190
Target Start/End: Original strand, 90873 - 91047
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| || ||  ||  ||||||||||||||  || ||||||||||    
T  90873 atagattaaatttgaagaattcatataaaccatccaaaaccctcctccaatacaattttttaattatccccaatgaggagggttttgtaatatgaagaaa 90972  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcct 190  Q
    |||||||||| |||| |||||| || | ||||| |||  ||||||| || ||||||||  ||||||| |||||||    
T  90973 agttaaccccccaaagccctcccctcctatttttctcaatttcttccacctgctcattctttttttcccaagcct 91047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 67; Significance: 9e-30; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 12247 - 12413
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaa 115  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| || ||  ||  ||||||||||||||  || ||||||||||    
T  12247 atagattaaatttgaagaattcatataaaccatccaaaaacctcctccaatacaattttttaattatccccaatgaggagggttttgtaatatgaagaaa 12346  T
Q  116 agttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||||||| |||| |||||| || | || || |||  ||||||| || ||||||||  |||||||    
T  12347 agttaaccccccaaagccctcccctcctatatttctcaatttcttccacctgctcattctttttttc 12413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 184 - 403
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    |||||||||||||||||||||| ||| |||||||||||| ||          |||||||||| |||||| ||||||| | |||| ||||||||||  |||    
T  184 atagattaaatttgaagaattcttattaaccctccaaaaccccgcaaaaccctcctccaatacaattttttagttcctccaaataaggagggttttgtat 283  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatt-tcttttttctcaagcctccctctaccttccc 204  Q
    |||||||||||||||||||| |||| | ||||||| |||||||||||  ||||||| ||||||| ||| | |||| || ||||| | || || |||||||    
T  284 tatgaagaaaagttaacccc-caaagctctcctctcccattttcctctatttcttccacttgcttattcttttttatcccaagctttcccctcccttccc 382  T
Q  205 cttcaaactcggaaacaaagc 225  Q
    || |||||||| |||||||||    
T  383 ctccaaactcgcaaacaaagc 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 60; Significance: 1e-25; HSPs: 4)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 6745 - 6967
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccct----------ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    |||||||||||||||||||||||||| ||||||          |||||| |||||||||||| ||| || ||||||| | |||||||||||||||  |||    
T  6745 atagattaaatttgaagaattcatattaacccttcgaaaccccccaaaaccctcctccaatacaatgttttagttcctccaaatgaggagggttttgtat 6844  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcctccctctaccttccc 204  Q
    ||||||||||||||||||   |||  |||||| || ||||||| |||  ||| |||  ||||||| || | |||||||||||| || || || |||||||    
T  6845 tatgaagaaaagttaaccttccaattccctcccctcccatttttctctattttttccgcttgctcgttcctttttttctcaagacttcccctcccttccc 6944  T
Q  205 cttcaaactcggaaacaaagcct 227  Q
    || |||||||| |||||||||||    
T  6945 ctccaaactcgcaaacaaagcct 6967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 7728 - 7950
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccct----------ccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    |||||||||||||||||||||||||| ||||||          |||||| |||||||||||| ||| || ||||||| | |||||||||||||||  |||    
T  7728 atagattaaatttgaagaattcatattaacccttcgaaaccccccaaaaccctcctccaatacaatgttttagttcctccaaatgaggagggttttgtat 7827  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcctccctctaccttccc 204  Q
    ||||||||||||||||||   |||  |||||| || ||||||| |||  ||| |||  ||||||| || | |||||||||||| || || || |||||||    
T  7828 tatgaagaaaagttaaccttccaattccctcccctcccatttttctctattttttccgcttgctcgttcctttttttctcaagacttcccctcccttccc 7927  T
Q  205 cttcaaactcggaaacaaagcct 227  Q
    || |||||||| |||||||||||    
T  7928 ctccaaactcgcaaacaaagcct 7950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 679 - 902
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    |||||||||||||||||||||||||| |||||| | ||| ||          |||||||| | ||| || ||||||| |||| ||||||||||||  |||    
T  679 atagattaaatttgaagaattcatattaacccttcgaaaccccacaaaaccatcctccaagacaatgttttagttcctcaaa-tgaggagggttttgtat 777  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcct--ccctctaccttc 202  Q
    |||||||||||||||||||  |||  |||||| || |||||||||||  ||| |||  ||||||| || | |||||||||||||||  |||||| ||||     
T  778 tatgaagaaaagttaaccctccaattccctcccctcccattttcctctattttttctgcttgctcgttcctttttttctcaagccttcccctctcccttt 877  T
Q  203 cccttcaaactcggaaacaaagcct 227  Q
    ||||||||||||| || ||||||||    
T  878 cccttcaaactcgcaatcaaagcct 902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 16 - 227
Target Start/End: Original strand, 3556 - 3779
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatat 105  Q
    |||||||||||||||||||||||||| |||||| | ||| ||          |||||||| | ||| || ||||||| |||| ||||||||||||  |||    
T  3556 atagattaaatttgaagaattcatattaacccttcgaaaccccacaaaaccatcctccaagacaatgttttagttcctcaaa-tgaggagggttttgtat 3654  T
Q  106 tatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttc-ttttttctcaagcct--ccctctaccttc 202  Q
    |||||||||||||||||||  |||  |||||| || |||||||||||  ||| |||  ||||||| || | |||||||||||||||  |||||| ||||     
T  3655 tatgaagaaaagttaaccctccaattccctcccctcccattttcctctattttttctgcttgctcgttcctttttttctcaagccttcccctctcccttt 3754  T
Q  203 cccttcaaactcggaaacaaagcct 227  Q
    ||||||||||||| || ||||||||    
T  3755 cccttcaaactcgcaatcaaagcct 3779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 230
Target Start/End: Original strand, 93530 - 93708
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctctt 141  Q
    |||||| |||||| |||||||||||| |||||| ||||||| | |||||||||| ||||  ||||||||||||||||||||||| |||||| |||||||     
T  93530 aaaccccccaaaaccctcctccaatacaattttttagttcctccaaatgaggagagttttgtattatgaagaaaagttaaccccccaaaacactcctctg 93629  T
Q  142 ccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactcggaaacaaagccttag 230  Q
     ||| |||||   ||||||| |||| || ||| |||||||| |||          |||||||||| |||||||| ||||||||||||||    
T  93630 tcatcttcctttatttcttccacttacttattccttttttcccaa----------accttcccctccaaactcgcaaacaaagccttag 93708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 57; Significance: 8e-24; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 30542 - 30381
Alignment:
Q  21 ttaaatttgaagaattcatataaaccctccaaaatc----------ctcctccaatataattttct-agttccccaaaatgaggagggtttaatattatg 109  Q
    ||||||||||||||||||||||||||||||||||||          ||| | ||||| |||||| | ||||||||||| |||||||| ||||  ||||||    
T  30542 ttaaatttgaagaattcatataaaccctccaaaatctctcaaaaccctcattcaatacaatttttttagttccccaaa-tgaggagg-tttagcattatg 30445  T
Q  110 aagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatt 173  Q
    || | ||||||||||| |||||||||| |||||||||||||||| ||||||| |||||||||||    
T  30444 aatataagttaaccccccaaaaccctcttcttccattttcctcgatttcttccacttgctcatt 30381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 173
Target Start/End: Complemental strand, 37210 - 37047
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatc----------ctcctccaatataattttct-agttccccaaaatgaggagggtttaatattat 108  Q
    |||||||||||||||||||||||||||||||||||||          ||| | ||||| |||||| | ||||||||||| ||| |||||||||  |||||    
T  37210 attaaatttgaagaattcatataaaccctccaaaatctctcaaaaccctcattcaatacaatttttttagttccccaaa-tgatgagggtttagcattat 37112  T
Q  109 gaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatt 173  Q
    ||| | ||||||||||| ||||  |||| |||||||||||||||| ||||||| |||||||||||    
T  37111 gaatataagttaaccccccaaagtcctcttcttccattttcctcgatttcttccacttgctcatt 37047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 29333 - 29162
Alignment:
Q  20 attaaatttgaagaattcatataaaccctccaaaatcc----------tcctccaatataattttctagttccccaaaatgaggagggtttaatattatg 109  Q
    |||||||||||||||||| ||| |||||||||||| ||          |||||||||| |||||| ||||||| | |||||| ||||||||  |||||||    
T  29333 attaaatttgaagaattcttattaaccctccaaaaccccccaaatccttcctccaatacaattttttagttcctccaaatgatgagggttttgtattatg 29234  T
Q  110 aagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttc 182  Q
    |||||||||||| ||| |||| |||| |||| |||||||| ||  ||||||| ||||||||||| ||||||||    
T  29233 aagaaaagttaa-ccctcaaagcccttctctcccattttcttctatttcttccacttgctcattccttttttc 29162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 82877 - 82770
Alignment:
Q  18 agattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagttccccaaaatgaggagggtttaatattatgaagaaaag 117  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||||| ||||||  |||||||  |||| |||||| |||  ||||||||||||||     
T  82877 agattgaatttgaagagttcatataaaccctccaaaatcatcctccaatacaattttggagttccctcaaattaggaggattttgtattatgaagaaaaa 82778  T
Q  118 ttaacccc 125  Q
    | ||||||    
T  82777 taaacccc 82770  T

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Target: scaffold0991 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 16 - 221
Target Start/End: Complemental strand, 3332 - 3130
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttcta-gttccccaaaatgaggagggtttaatattatgaagaa 114  Q
    |||||||||| ||||||||||| ||||||||||| ||||  || ||| |||| |||||| || |||||||||| |||||||| |||  ||||||||| ||    
T  3332 atagattaaaattgaagaattcgtataaaccctctaaaactcttctctaatacaattttttaagttccccaaa-tgaggaggattttgtattatgaa-aa 3235  T
Q  115 aagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatttcttttttctcaagcctccctctaccttccccttcaaactc 214  Q
    ||||||||||  | ||| |||||  |  |||||| |||  ||||||| ||||||||||| |||||||    ||||| ||||| ||||||||| |||||||    
T  3234 aagttaaccc--ccaaagcctccaatctcatttttctctatttcttctacttgctcattcctttttttcgcagccttcctctcccttcccctccaaactc 3137  T
Q  215 ggaaaca 221  Q
    | |||||    
T  3136 gaaaaca 3130  T

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Target: scaffold0388 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 86 - 173
Target Start/End: Complemental strand, 7083 - 6996
Alignment:
Q  86 aaatgaggagggtttaatattatgaagaaaagttaaccccacaaaaccctcctcttccattttcctcgttttcttcaacttgctcatt 173  Q
    |||||||||||||||  |||||||||||||||| |||| | ||||||||||| || |||||||||||  ||||||| |||||||||||    
T  7083 aaatgaggagggttttgtattatgaagaaaagtaaacctcccaaaaccctcccctcccattttcctctatttcttctacttgctcatt 6996  T

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Target: scaffold0388; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 7164 - 7128
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaa 52  Q
    ||||||||||||| || ||||||||||||||||||||    
T  7164 atagattaaatttaaaaaattcatataaaccctccaa 7128  T

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Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 56560 - 56605
Alignment:
Q  42 aaaccctccaaaatcctcctccaatataattttctagttccccaaa 87  Q
    |||| |||||||||||||||||||||||||||| |||||| |||||    
T  56560 aaactctccaaaatcctcctccaatataattttttagttctccaaa 56605  T

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Target: scaffold0140 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 19415 - 19455
Alignment:
Q  27 ttgaagaattcatataaaccctccaaaatcctcctccaata 67  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  19415 ttgaagaattcatataaacccaccaaaatccttctccaata 19455  T

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Target: scaffold0598 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 9391 - 9426
Alignment:
Q  14 atatagattaaatttgaagaattcatataaaccctc 49  Q
    ||||| ||||||||||||||||||||||||||||||    
T  9391 atatatattaaatttgaagaattcatataaaccctc 9426  T

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Target: scaffold1763 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 1285 - 1349
Alignment:
Q  16 atagattaaatttgaagaattcatataaaccctccaaaatcctcctccaatataattttctagtt 80  Q
    |||||||||||||||| |||| || ||||| ||   ||||||||||| ||||||||||| |||||    
T  1285 atagattaaatttgaataattgatgtaaacgctgataaatcctcctcaaatataattttttagtt 1349  T

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Target: scaffold0059 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 17499 - 17567
Alignment:
Q  20 attaaatttgaagaattcatataaaccctcc-aaaatcctcctccaatataattttctagttccccaaa 87  Q
    ||||||||||||||||||||||||| ||||| ||||  ||||||  ||| |||||| ||||||| ||||    
T  17499 attaaatttgaagaattcatataaatcctcctaaaacactcctcggatacaattttttagttcctcaaa 17567  T

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