View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15911_high_11 (Length: 305)
Name: NF15911_high_11
Description: NF15911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15911_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 18 - 297
Target Start/End: Complemental strand, 27008695 - 27008416
Alignment:
| Q |
18 |
aaaataaaggtggaaattccactataacatgagtgccaaagtttcattatttaatcatcaaaccacggcttcggatcacatcactgctggtattacccgc |
117 |
Q |
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| T |
27008695 |
aaaataaaggtggaaattccactataacatgagtgccaaagtttcattatttaatcatcaaaccacggcttcggatcacatcactgctggtattacccgc |
27008596 |
T |
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| Q |
118 |
ctaaaattgaatcaaccaatttgattcttagttaagtaaactgaaattaacttttatcataagttaatcgcataatttgaattagtaaaattaattaaat |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
27008595 |
ctaaaattgaatcaaccaatttgattcttagttaagtaaactgaaattaacttttatcataagttaatcacataatttgaattagtaaaattaattaaat |
27008496 |
T |
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| Q |
218 |
gaaaacgcaacatcaatataactgattatgtgtacttcacatgttaacataaagaaacaaaattgacccaacttcatctc |
297 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27008495 |
gaaaacgcaacatcaatataagtgattatgtgtacttcacatgttaacataaagaaacaaaattgacccaacttcatctc |
27008416 |
T |
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