View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15911_high_14 (Length: 274)
Name: NF15911_high_14
Description: NF15911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15911_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 8 - 255
Target Start/End: Original strand, 330047 - 330294
Alignment:
| Q |
8 |
accaatagattgcaagtctctgtattttgctattttacataaaatattaagaattaccaacaatggaatgtgcaaaatttcaatttgataggagaaattg |
107 |
Q |
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| T |
330047 |
accaatagattgcaagtctctgtattttactattttacataaaatattaagaattaccagtaatggaatgtgcaaaatttcaatttgatgggagaaattg |
330146 |
T |
|
| Q |
108 |
ttctatttgtaactgtatgcatctataaacacatttcttttgatgagaatcataagtattggattttgtttgcttgtttagtatttgtttcaaatcttaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
330147 |
ttctatttgtaactgtatgcatctataaacacatttcttttgatgagaatcataagtattggattttgtttgcttgtttagtatttgtttcaaatcttaa |
330246 |
T |
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| Q |
208 |
gtatttaaaacacatgaagttagtgtgaccttgattgcaacctaagag |
255 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
330247 |
gtatttaaaacacatgaagttagtgtggccttgattgcaacctaagag |
330294 |
T |
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