View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15911_high_7 (Length: 380)
Name: NF15911_high_7
Description: NF15911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15911_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 279; Significance: 1e-156; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 21 - 346
Target Start/End: Original strand, 42955769 - 42956095
Alignment:
| Q |
21 |
taaacgagaaaacggtaagaatgaaaagattgaaaacacatgatttatctaggttcatggcaatacattctgcttcctcactttctattt-atttgatca |
119 |
Q |
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| T |
42955769 |
taaacgagaaaacgggaagaatgaaaagattgaaaacacatgatttatctaggttcttagcaatacattctgcttcctcactttctattttatttgatca |
42955868 |
T |
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| Q |
120 |
aaagaatgcagagatacaacaatttctcagctcaaagattcactcactttattttctctctttcagtctaaaaaataccatctgatttcatgatttcaac |
219 |
Q |
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| T |
42955869 |
aaagaatgcagagatacaacaatttctcagctcaaagattcactcactttattttctctcattcagtctaaaaaataccatctgatttcatgttttcaac |
42955968 |
T |
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| Q |
220 |
aaaccgtgacatatataaccgatattgagttataactgaaatgaacaaagatgttatcgcaacagcttttataaaaaacataagcaaaaactaacttggt |
319 |
Q |
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| T |
42955969 |
aagccgtgacatatataaccgatatagagttataactgaaatgaacaaagatgttatcgcaacagcttttataaaaaacataggcaaaatctaacttggt |
42956068 |
T |
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| Q |
320 |
aaattgtaaacacaattaatgatcctg |
346 |
Q |
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| T |
42956069 |
aaattgtaaacacaattagtgatcctg |
42956095 |
T |
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