View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15911_low_11 (Length: 306)
Name: NF15911_low_11
Description: NF15911
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15911_low_11 |
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Alignment Details
Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 4054118 - 4054284
Alignment:
| Q |
124 |
ttatattacatgtattatgtgaaaattaaaaccgaattggaactcatggaaaaggtgaataaattttaatttaactaaataagtgaaacaaaagacgaca |
223 |
Q |
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| T |
4054118 |
ttatattacatgtattatgtgaaaattaaaaccgaattggaactcatagaaaaggtgaataaattttaatttaaccaaataagtgaaacaaaagacgaca |
4054217 |
T |
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| Q |
224 |
aaaaacaacagttttattaaagtatgatatcaaatcaattcccataatttgtcacatttcatggttg |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4054218 |
aaaaacaacagttttattaaagtatgatatcaaatcaattcccataatttgtcacatttcatggttg |
4054284 |
T |
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