View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15914_low_8 (Length: 331)
Name: NF15914_low_8
Description: NF15914
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15914_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 5 - 315
Target Start/End: Original strand, 7067005 - 7067315
Alignment:
| Q |
5 |
agaagaagaagacgaagaacgaaacgtcgcggtttctaacaattcagctgttgaaggatcagcaaaattaaacatctctgataacatacctgcagtttca |
104 |
Q |
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| T |
7067005 |
agaagaagaagacgaagaacgaaacgtcgcggtttctaacaattcagctgttgaaggatcagcaaaattaaacatctctgataacatacctgcagtttca |
7067104 |
T |
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| Q |
105 |
tacacacctcctctttcatctccttctccttctgataaattcaacccttgaagcagcctaactttgtccctttggatctgtnnnnnnnnnnnnnnnnnnn |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7067105 |
tacacacctcctctttcatctccttctccttctgataaattcaacccttgaagcagcctaactttgtccctttggatctgttgctgctgctgttgctgct |
7067204 |
T |
|
| Q |
205 |
nnnntgacgatgatgatctctcgaatccattcgaggagaagccgaagattgcttgctgataatcttgggacatagaatttgaagttgaacaatccaaggt |
304 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7067205 |
gttgtgacgacgatgatctctcgaatccattcgaggagaagccgaagattgcttgctgataatcttgggacatagaatttgaagttgaacaatccaaggt |
7067304 |
T |
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| Q |
305 |
tctttggtttt |
315 |
Q |
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||||||||||| |
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| T |
7067305 |
tctttggtttt |
7067315 |
T |
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