View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15915_low_11 (Length: 230)
Name: NF15915_low_11
Description: NF15915
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15915_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 37809875 - 37810087
Alignment:
| Q |
1 |
taaatagataaataaaataagagtttaggctttgtccnnnnnnnnnnngaaagagtttaggcttttacttctactcccttcgtaattataactagtcttt |
100 |
Q |
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| T |
37809875 |
taaatagataaataaaataagagtttaggctttgtccaaaaaaaaaa-gaaagagtttaggcttttacttctactcccttcgtaattataactagtcttt |
37809973 |
T |
|
| Q |
101 |
aaaatatgaaaagtcagaattaaataaacctacacattaattgaataatatttatacccaaaatttacctatttaattacactgctaattgtttttaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
37809974 |
aaaatatgaaaagtcagaattaaataaacctacacattaattgaataatatttatacccaaaatctacctatttaattacactgctaattgtttttaata |
37810073 |
T |
|
| Q |
201 |
tatatgcgtatgtg |
214 |
Q |
| |
|
|||||||||||||| |
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| T |
37810074 |
tatatgcgtatgtg |
37810087 |
T |
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