View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15917_low_15 (Length: 230)

Name: NF15917_low_15
Description: NF15917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15917_low_15
NF15917_low_15
[»] chr6 (50 HSPs)
chr6 (10-230)||(15041237-15041457)
chr6 (20-221)||(19863202-19863403)
chr6 (20-230)||(22432474-22432684)
chr6 (10-230)||(16924566-16924786)
chr6 (10-178)||(31164586-31164754)
chr6 (20-230)||(25641870-25642080)
chr6 (10-230)||(16964997-16965217)
chr6 (24-230)||(22439028-22439234)
chr6 (10-230)||(16929281-16929497)
chr6 (20-164)||(19873344-19873488)
chr6 (20-230)||(21739709-21739919)
chr6 (20-161)||(22334647-22334788)
chr6 (20-230)||(18907330-18907541)
chr6 (20-230)||(16523090-16523300)
chr6 (89-230)||(18180780-18180921)
chr6 (89-179)||(17804474-17804564)
chr6 (89-179)||(27415681-27415771)
chr6 (90-179)||(12496586-12496675)
chr6 (90-179)||(18955502-18955591)
chr6 (40-229)||(21834578-21834767)
chr6 (89-160)||(22429788-22429859)
chr6 (90-179)||(1644983-1645072)
chr6 (90-179)||(12706966-12707055)
chr6 (90-179)||(20907720-20907809)
chr6 (91-179)||(9482032-9482120)
chr6 (90-162)||(16741484-16741556)
chr6 (91-179)||(23990200-23990288)
chr6 (93-179)||(21702568-21702654)
chr6 (90-179)||(19663046-19663135)
chr6 (98-179)||(19790518-19790599)
chr6 (90-179)||(22863224-22863313)
chr6 (91-179)||(8244140-8244228)
chr6 (91-179)||(11567142-11567230)
chr6 (90-162)||(14472548-14472620)
chr6 (91-179)||(23395348-23395436)
chr6 (91-149)||(19870870-19870928)
chr6 (91-149)||(25135441-25135499)
chr6 (90-179)||(5616553-5616642)
chr6 (20-161)||(15894185-15894326)
chr6 (90-147)||(23657191-23657248)
chr6 (114-179)||(25766907-25766972)
chr6 (91-179)||(1587470-1587558)
chr6 (91-179)||(12618583-12618671)
chr6 (91-179)||(18917005-18917093)
chr6 (122-230)||(22405752-22405860)
chr6 (98-154)||(22592568-22592624)
chr6 (91-179)||(27567348-27567436)
chr6 (83-154)||(22059506-22059577)
chr6 (101-154)||(20803317-20803370)
chr6 (90-139)||(27553386-27553435)
[»] chr7 (50 HSPs)
chr7 (20-230)||(18154523-18154733)
chr7 (19-221)||(19649180-19649382)
chr7 (20-230)||(24054691-24054901)
chr7 (20-221)||(9703489-9703690)
chr7 (20-230)||(11880475-11880685)
chr7 (20-230)||(12321429-12321639)
chr7 (20-230)||(17137750-17137960)
chr7 (20-230)||(12187236-12187446)
chr7 (83-221)||(10508778-10508916)
chr7 (20-230)||(14430101-14430311)
chr7 (83-230)||(2760413-2760560)
chr7 (90-162)||(18814-18886)
chr7 (91-179)||(13149433-13149521)
chr7 (89-179)||(12318404-12318494)
chr7 (89-162)||(48593212-48593285)
chr7 (89-179)||(11312925-11313015)
chr7 (89-179)||(11987489-11987579)
chr7 (89-179)||(13635208-13635298)
chr7 (89-179)||(15605011-15605101)
chr7 (90-179)||(26292673-26292762)
chr7 (91-179)||(12715144-12715232)
chr7 (90-179)||(6801490-6801579)
chr7 (89-162)||(9593622-9593695)
chr7 (89-162)||(9644585-9644658)
chr7 (98-179)||(18557257-18557338)
chr7 (91-179)||(12718948-12719036)
chr7 (91-179)||(12723859-12723947)
chr7 (90-162)||(16438790-16438862)
chr7 (91-179)||(16906939-16907027)
chr7 (91-179)||(18279683-18279771)
chr7 (91-179)||(18283646-18283734)
chr7 (90-154)||(8917704-8917768)
chr7 (91-179)||(15728603-15728691)
chr7 (91-179)||(16114521-16114609)
chr7 (91-179)||(16117674-16117762)
chr7 (89-179)||(11262605-11262695)
chr7 (89-179)||(11548006-11548096)
chr7 (89-179)||(11554602-11554692)
chr7 (93-179)||(16275772-16275858)
chr7 (90-179)||(14217192-14217281)
chr7 (89-146)||(15580968-15581025)
chr7 (98-146)||(9445930-9445978)
chr7 (99-179)||(12692782-12692862)
chr7 (90-154)||(13462039-13462103)
chr7 (99-179)||(14953484-14953564)
chr7 (128-230)||(15211759-15211861)
chr7 (95-149)||(35151888-35151942)
chr7 (90-179)||(25038949-25039038)
chr7 (99-179)||(14959450-14959530)
chr7 (98-146)||(20569368-20569416)
[»] chr1 (35 HSPs)
chr1 (20-230)||(21714772-21714982)
chr1 (20-228)||(42864900-42865108)
chr1 (21-221)||(22468392-22468592)
chr1 (27-230)||(21787729-21787932)
chr1 (20-230)||(22831065-22831275)
chr1 (20-230)||(21022860-21023070)
chr1 (20-230)||(6152077-6152287)
chr1 (88-230)||(3472613-3472755)
chr1 (20-161)||(20091229-20091370)
chr1 (27-230)||(18181808-18182011)
chr1 (90-221)||(8761329-8761460)
chr1 (93-179)||(20138364-20138450)
chr1 (89-179)||(36819047-36819137)
chr1 (89-162)||(16080200-16080273)
chr1 (89-179)||(17678326-17678416)
chr1 (89-179)||(21305591-21305681)
chr1 (89-179)||(33797810-33797900)
chr1 (90-162)||(12647147-12647219)
chr1 (91-179)||(20228548-20228636)
chr1 (103-230)||(22432470-22432597)
chr1 (90-179)||(18882645-18882734)
chr1 (90-179)||(46975745-46975834)
chr1 (91-179)||(16375196-16375284)
chr1 (91-179)||(21407635-21407723)
chr1 (93-149)||(21615718-21615774)
chr1 (91-179)||(52639821-52639909)
chr1 (83-146)||(22449037-22449100)
chr1 (89-179)||(19212144-19212234)
chr1 (90-179)||(45489482-45489571)
chr1 (91-154)||(23819063-23819126)
chr1 (89-179)||(24782839-24782929)
chr1 (90-179)||(23763489-23763578)
chr1 (90-147)||(45310137-45310194)
chr1 (99-179)||(21438081-21438161)
chr1 (20-76)||(48603739-48603795)
[»] chr8 (48 HSPs)
chr8 (20-230)||(21395669-21395879)
chr8 (20-230)||(21790162-21790372)
chr8 (22-230)||(21389139-21389347)
chr8 (20-230)||(19899317-19899527)
chr8 (20-221)||(17353633-17353834)
chr8 (20-230)||(16184950-16185160)
chr8 (20-230)||(19976667-19976877)
chr8 (28-230)||(21168408-21168610)
chr8 (20-223)||(24755943-24756146)
chr8 (20-230)||(19983315-19983525)
chr8 (20-230)||(30642978-30643188)
chr8 (83-230)||(22010366-22010513)
chr8 (20-230)||(23776521-23776732)
chr8 (83-230)||(20465726-20465873)
chr8 (20-230)||(377500-377710)
chr8 (86-230)||(19259288-19259432)
chr8 (20-230)||(15602704-15602914)
chr8 (20-230)||(15611156-15611366)
chr8 (20-230)||(17926394-17926604)
chr8 (91-162)||(23846771-23846842)
chr8 (90-179)||(15532166-15532255)
chr8 (90-179)||(24433976-24434065)
chr8 (91-179)||(22113467-22113555)
chr8 (91-179)||(22134970-22135058)
chr8 (120-230)||(16409942-16410052)
chr8 (90-179)||(15538726-15538815)
chr8 (28-133)||(21161842-21161947)
chr8 (91-179)||(22166120-22166208)
chr8 (90-221)||(20856121-20856252)
chr8 (89-179)||(16231214-16231304)
chr8 (89-179)||(22028834-22028924)
chr8 (89-179)||(23834450-23834540)
chr8 (90-154)||(17828347-17828411)
chr8 (91-179)||(43252092-43252180)
chr8 (93-179)||(17055128-17055214)
chr8 (89-149)||(16861095-16861155)
chr8 (99-179)||(22045145-22045225)
chr8 (93-149)||(32598959-32599015)
chr8 (93-149)||(32605491-32605547)
chr8 (90-146)||(39094713-39094769)
chr8 (90-179)||(18619756-18619845)
chr8 (90-179)||(20527727-20527816)
chr8 (90-179)||(30308493-30308582)
chr8 (91-147)||(21972355-21972411)
chr8 (91-147)||(21976440-21976496)
chr8 (195-230)||(21161802-21161837)
chr8 (114-161)||(22875385-22875432)
chr8 (91-179)||(19278023-19278110)
[»] scaffold0102 (1 HSPs)
scaffold0102 (20-230)||(48147-48357)
[»] scaffold0004 (3 HSPs)
scaffold0004 (20-230)||(70018-70228)
scaffold0004 (89-179)||(10323-10413)
scaffold0004 (90-179)||(58157-58246)
[»] scaffold0139 (1 HSPs)
scaffold0139 (20-221)||(20205-20406)
[»] chr5 (48 HSPs)
chr5 (23-230)||(26704291-26704498)
chr5 (23-230)||(26974024-26974231)
chr5 (20-221)||(37724126-37724327)
chr5 (20-211)||(14079370-14079561)
chr5 (20-230)||(22032538-22032748)
chr5 (30-230)||(23512339-23512539)
chr5 (20-221)||(23201590-23201792)
chr5 (20-230)||(18769691-18769901)
chr5 (20-230)||(23501032-23501242)
chr5 (83-221)||(23572364-23572502)
chr5 (20-230)||(21366353-21366563)
chr5 (98-230)||(21887124-21887256)
chr5 (88-230)||(20805837-20805979)
chr5 (89-179)||(23535328-23535418)
chr5 (20-144)||(21873471-21873595)
chr5 (89-179)||(17410724-17410814)
chr5 (89-179)||(20910539-20910629)
chr5 (89-162)||(18356604-18356677)
chr5 (91-179)||(21884928-21885016)
chr5 (90-179)||(21340506-21340595)
chr5 (90-179)||(26665870-26665959)
chr5 (90-179)||(26937467-26937556)
chr5 (91-179)||(19472458-19472546)
chr5 (91-159)||(26172743-26172811)
chr5 (89-148)||(1858746-1858805)
chr5 (89-179)||(23451634-23451724)
chr5 (89-179)||(23463139-23463229)
chr5 (90-147)||(123076-123133)
chr5 (90-179)||(16674430-16674519)
chr5 (90-179)||(20232828-20232917)
chr5 (98-219)||(31342403-31342524)
chr5 (90-162)||(17918907-17918979)
chr5 (91-179)||(20296127-20296215)
chr5 (89-179)||(23458878-23458968)
chr5 (90-179)||(12028304-12028393)
chr5 (98-175)||(17718182-17718259)
chr5 (98-179)||(24222174-24222255)
chr5 (90-179)||(24532787-24532876)
chr5 (98-162)||(18774490-18774554)
chr5 (90-162)||(26742502-26742574)
chr5 (90-154)||(42805698-42805762)
chr5 (91-154)||(25229170-25229233)
chr5 (91-154)||(25293326-25293389)
chr5 (90-179)||(21295002-21295091)
chr5 (90-179)||(25535266-25535355)
chr5 (90-179)||(26680868-26680957)
chr5 (90-179)||(26952475-26952564)
chr5 (101-162)||(18784336-18784397)
[»] chr2 (42 HSPs)
chr2 (20-230)||(23038257-23038467)
chr2 (20-230)||(22798813-22799023)
chr2 (20-230)||(22740647-22740857)
chr2 (20-221)||(40621904-40622105)
chr2 (20-230)||(22758402-22758612)
chr2 (20-230)||(23019393-23019603)
chr2 (55-230)||(23100917-23101092)
chr2 (20-230)||(45677842-45678052)
chr2 (20-230)||(25963404-25963614)
chr2 (20-230)||(37524886-37525096)
chr2 (86-230)||(24673864-24674008)
chr2 (20-230)||(21918003-21918213)
chr2 (91-179)||(15477883-15477971)
chr2 (91-159)||(19928261-19928329)
chr2 (90-179)||(22460929-22461018)
chr2 (89-179)||(19688495-19688585)
chr2 (89-179)||(24735680-24735770)
chr2 (91-179)||(12901251-12901339)
chr2 (91-179)||(24649636-24649724)
chr2 (91-179)||(27379171-27379259)
chr2 (91-179)||(27383217-27383305)
chr2 (91-149)||(27602076-27602134)
chr2 (90-179)||(18855200-18855289)
chr2 (90-179)||(23187353-23187442)
chr2 (90-179)||(23598616-23598705)
chr2 (98-179)||(24655077-24655158)
chr2 (98-179)||(24870177-24870258)
chr2 (138-230)||(22811621-22811713)
chr2 (91-179)||(24628217-24628305)
chr2 (93-149)||(26125484-26125540)
chr2 (91-147)||(41530780-41530836)
chr2 (93-149)||(41667230-41667286)
chr2 (98-179)||(24175097-24175178)
chr2 (91-179)||(61094-61182)
chr2 (103-163)||(24716285-24716345)
chr2 (98-146)||(25961306-25961354)
chr2 (91-154)||(21327330-21327393)
chr2 (83-154)||(44370062-44370133)
chr2 (20-58)||(23103255-23103293)
chr2 (98-154)||(21318399-21318455)
chr2 (190-230)||(24658032-24658072)
chr2 (98-146)||(40428762-40428810)
[»] chr3 (56 HSPs)
chr3 (20-221)||(15877524-15877725)
chr3 (30-221)||(23408664-23408855)
chr3 (83-230)||(16369692-16369839)
chr3 (20-230)||(15060513-15060723)
chr3 (86-230)||(12173073-12173217)
chr3 (20-230)||(856357-856567)
chr3 (20-230)||(12496476-12496686)
chr3 (20-230)||(18383604-18383814)
chr3 (27-230)||(14878192-14878396)
chr3 (22-230)||(19725599-19725807)
chr3 (27-175)||(23052819-23052967)
chr3 (20-230)||(11298216-11298426)
chr3 (20-230)||(15051737-15051947)
chr3 (20-230)||(23077165-23077375)
chr3 (20-230)||(322810-323020)
chr3 (89-179)||(7793085-7793175)
chr3 (83-230)||(26190696-26190843)
chr3 (83-221)||(12037649-12037787)
chr3 (89-179)||(15849824-15849914)
chr3 (89-179)||(16797793-16797883)
chr3 (90-179)||(326903-326992)
chr3 (90-179)||(1598219-1598308)
chr3 (90-179)||(3833952-3834041)
chr3 (90-179)||(11300250-11300339)
chr3 (20-121)||(17524948-17525049)
chr3 (89-179)||(2897562-2897652)
chr3 (89-179)||(15482939-15483029)
chr3 (89-179)||(16808620-16808710)
chr3 (20-154)||(16909971-16910105)
chr3 (89-179)||(20461239-20461329)
chr3 (90-179)||(15941643-15941732)
chr3 (90-179)||(17242250-17242339)
chr3 (90-179)||(38814662-38814751)
chr3 (92-179)||(1982549-1982636)
chr3 (53-179)||(20723242-20723368)
chr3 (91-149)||(15617656-15617714)
chr3 (89-162)||(31097310-31097383)
chr3 (91-179)||(7109981-7110069)
chr3 (91-179)||(7113916-7114004)
chr3 (86-226)||(11863078-11863217)
chr3 (91-179)||(16697071-16697159)
chr3 (91-179)||(22337002-22337090)
chr3 (91-179)||(27409382-27409470)
chr3 (90-179)||(11594878-11594967)
chr3 (90-179)||(42326222-42326311)
chr3 (86-226)||(11851860-11851999)
chr3 (91-179)||(11855015-11855103)
chr3 (91-179)||(16690498-16690586)
chr3 (91-179)||(22321947-22322035)
chr3 (152-230)||(321701-321779)
chr3 (98-179)||(3402694-3402775)
chr3 (90-179)||(24188055-24188144)
chr3 (90-179)||(55149256-55149345)
chr3 (91-149)||(28950007-28950065)
chr3 (99-179)||(839533-839613)
chr3 (98-146)||(11557156-11557204)
[»] scaffold0131 (1 HSPs)
scaffold0131 (20-230)||(36680-36890)
[»] scaffold0101 (1 HSPs)
scaffold0101 (20-221)||(8653-8854)
[»] scaffold0031 (2 HSPs)
scaffold0031 (20-226)||(65484-65690)
scaffold0031 (89-179)||(53842-53932)
[»] scaffold0021 (1 HSPs)
scaffold0021 (20-218)||(174989-175187)
[»] scaffold0261 (1 HSPs)
scaffold0261 (20-230)||(1562-1772)
[»] chr4 (42 HSPs)
chr4 (20-221)||(13569734-13569935)
chr4 (20-230)||(15093995-15094205)
chr4 (20-230)||(44675854-44676064)
chr4 (20-226)||(12570243-12570449)
chr4 (83-230)||(15121490-15121637)
chr4 (29-221)||(15124850-15125042)
chr4 (20-230)||(23843700-23843911)
chr4 (20-230)||(16356640-16356850)
chr4 (27-230)||(16487765-16487968)
chr4 (91-179)||(9556809-9556897)
chr4 (91-179)||(16243139-16243227)
chr4 (89-179)||(36133701-36133791)
chr4 (91-179)||(18222117-18222205)
chr4 (92-179)||(16678328-16678415)
chr4 (89-162)||(1951517-1951590)
chr4 (90-179)||(15353045-15353134)
chr4 (98-179)||(45938433-45938514)
chr4 (91-179)||(2015057-2015145)
chr4 (92-179)||(19757340-19757427)
chr4 (92-179)||(19782379-19782466)
chr4 (90-179)||(17152226-17152315)
chr4 (90-179)||(23139548-23139637)
chr4 (90-179)||(26243404-26243493)
chr4 (91-179)||(28569183-28569271)
chr4 (91-179)||(33742657-33742745)
chr4 (90-149)||(27534303-27534362)
chr4 (91-149)||(4561102-4561160)
chr4 (91-149)||(5756706-5756764)
chr4 (90-179)||(11250300-11250389)
chr4 (90-179)||(18237170-18237259)
chr4 (89-149)||(43255930-43255990)
chr4 (98-175)||(3413082-3413159)
chr4 (90-179)||(23838711-23838800)
chr4 (98-179)||(25555802-25555883)
chr4 (93-146)||(42997222-42997275)
chr4 (93-149)||(14708403-14708459)
chr4 (98-146)||(16351620-16351668)
chr4 (89-179)||(41385484-41385574)
chr4 (90-179)||(9530711-9530800)
chr4 (90-179)||(14679240-14679329)
chr4 (99-179)||(14685458-14685538)
chr4 (101-149)||(18602514-18602562)
[»] scaffold0671 (1 HSPs)
scaffold0671 (20-228)||(6325-6533)
[»] scaffold0324 (1 HSPs)
scaffold0324 (40-221)||(15643-15824)
[»] scaffold0081 (3 HSPs)
scaffold0081 (20-230)||(14894-15103)
scaffold0081 (20-230)||(23909-24118)
scaffold0081 (20-230)||(39333-39542)
[»] scaffold0043 (2 HSPs)
scaffold0043 (20-230)||(18462-18672)
scaffold0043 (91-179)||(76910-76998)
[»] scaffold0111 (2 HSPs)
scaffold0111 (29-221)||(32665-32857)
scaffold0111 (91-149)||(8778-8836)
[»] scaffold0311 (1 HSPs)
scaffold0311 (20-223)||(6772-6975)
[»] scaffold0174 (1 HSPs)
scaffold0174 (20-211)||(18159-18350)
[»] scaffold0149 (2 HSPs)
scaffold0149 (20-230)||(3964-4173)
scaffold0149 (20-230)||(8395-8604)
[»] scaffold0096 (1 HSPs)
scaffold0096 (28-230)||(16036-16238)
[»] scaffold0080 (1 HSPs)
scaffold0080 (83-230)||(18343-18490)
[»] scaffold0042 (4 HSPs)
scaffold0042 (20-221)||(34606-34807)
scaffold0042 (83-226)||(41244-41387)
scaffold0042 (90-162)||(64131-64203)
scaffold0042 (90-149)||(76015-76074)
[»] scaffold0297 (1 HSPs)
scaffold0297 (20-179)||(15407-15566)
[»] scaffold0198 (1 HSPs)
scaffold0198 (103-230)||(26706-26833)
[»] scaffold0215 (1 HSPs)
scaffold0215 (23-221)||(27048-27246)
[»] scaffold0023 (3 HSPs)
scaffold0023 (20-230)||(23354-23564)
scaffold0023 (128-230)||(38187-38289)
scaffold0023 (20-76)||(38320-38376)
[»] scaffold0210 (2 HSPs)
scaffold0210 (20-221)||(21502-21703)
scaffold0210 (20-221)||(29394-29595)
[»] scaffold0017 (3 HSPs)
scaffold0017 (98-230)||(190968-191100)
scaffold0017 (99-230)||(192671-192802)
scaffold0017 (91-179)||(56376-56464)
[»] scaffold0056 (1 HSPs)
scaffold0056 (83-226)||(13768-13911)
[»] scaffold0761 (1 HSPs)
scaffold0761 (27-221)||(6005-6199)
[»] scaffold0412 (1 HSPs)
scaffold0412 (20-230)||(6103-6313)
[»] scaffold0035 (1 HSPs)
scaffold0035 (20-230)||(46414-46624)
[»] scaffold0393 (1 HSPs)
scaffold0393 (20-230)||(1712-1922)
[»] scaffold0676 (1 HSPs)
scaffold0676 (83-230)||(4712-4859)
[»] scaffold0029 (3 HSPs)
scaffold0029 (83-230)||(13043-13190)
scaffold0029 (91-149)||(61381-61439)
scaffold0029 (94-179)||(65267-65352)
[»] scaffold1296 (1 HSPs)
scaffold1296 (20-230)||(612-822)
[»] scaffold1124 (1 HSPs)
scaffold1124 (20-230)||(2098-2308)
[»] scaffold0615 (1 HSPs)
scaffold0615 (20-230)||(1771-1981)
[»] scaffold0114 (1 HSPs)
scaffold0114 (20-230)||(7512-7722)
[»] scaffold0020 (1 HSPs)
scaffold0020 (120-230)||(178974-179084)
[»] scaffold0013 (1 HSPs)
scaffold0013 (89-179)||(2412-2502)
[»] scaffold0216 (1 HSPs)
scaffold0216 (89-230)||(16808-16949)
[»] scaffold0104 (2 HSPs)
scaffold0104 (101-230)||(2129-2258)
scaffold0104 (101-230)||(9811-9940)
[»] scaffold0008 (2 HSPs)
scaffold0008 (89-226)||(30436-30573)
scaffold0008 (93-149)||(2157-2213)
[»] scaffold0158 (2 HSPs)
scaffold0158 (87-230)||(3128-3271)
scaffold0158 (87-230)||(6794-6937)
[»] scaffold0555 (1 HSPs)
scaffold0555 (20-161)||(804-945)
[»] scaffold0425 (1 HSPs)
scaffold0425 (18-230)||(377-589)
[»] scaffold0476 (2 HSPs)
scaffold0476 (88-230)||(5872-6014)
scaffold0476 (88-230)||(7067-7209)
[»] scaffold0367 (1 HSPs)
scaffold0367 (88-230)||(1183-1325)
[»] scaffold0228 (1 HSPs)
scaffold0228 (89-179)||(18371-18461)
[»] scaffold0044 (3 HSPs)
scaffold0044 (89-179)||(19465-19555)
scaffold0044 (89-179)||(13181-13271)
scaffold0044 (93-149)||(62541-62597)
[»] scaffold0037 (1 HSPs)
scaffold0037 (20-230)||(21256-21466)
[»] scaffold0036 (1 HSPs)
scaffold0036 (89-179)||(66154-66244)
[»] scaffold0009 (1 HSPs)
scaffold0009 (89-179)||(228112-228202)
[»] scaffold0003 (4 HSPs)
scaffold0003 (89-179)||(71590-71680)
scaffold0003 (89-179)||(96883-96973)
scaffold0003 (90-179)||(139988-140077)
scaffold0003 (98-146)||(413822-413870)
[»] scaffold1461 (1 HSPs)
scaffold1461 (90-179)||(207-296)
[»] scaffold0585 (1 HSPs)
scaffold0585 (91-179)||(9613-9701)
[»] scaffold0193 (1 HSPs)
scaffold0193 (93-179)||(9701-9787)
[»] scaffold0107 (1 HSPs)
scaffold0107 (89-179)||(15157-15247)
[»] scaffold0001 (1 HSPs)
scaffold0001 (89-179)||(173567-173657)
[»] scaffold1220 (1 HSPs)
scaffold1220 (89-158)||(2079-2148)
[»] scaffold0410 (1 HSPs)
scaffold0410 (90-179)||(11658-11747)
[»] scaffold0177 (1 HSPs)
scaffold0177 (89-162)||(13243-13316)
[»] scaffold0168 (1 HSPs)
scaffold0168 (89-162)||(3286-3359)
[»] scaffold0120 (1 HSPs)
scaffold0120 (90-179)||(19756-19845)
[»] scaffold0070 (1 HSPs)
scaffold0070 (90-179)||(10181-10270)
[»] scaffold0012 (1 HSPs)
scaffold0012 (90-179)||(24707-24796)
[»] scaffold1326 (1 HSPs)
scaffold1326 (83-230)||(1187-1324)
[»] scaffold0483 (1 HSPs)
scaffold0483 (89-165)||(608-684)
[»] scaffold0109 (3 HSPs)
scaffold0109 (89-165)||(45395-45471)
scaffold0109 (91-149)||(11071-11129)
scaffold0109 (91-149)||(38588-38646)
[»] scaffold0327 (1 HSPs)
scaffold0327 (88-230)||(566-698)
[»] scaffold0220 (1 HSPs)
scaffold0220 (83-230)||(4620-4767)
[»] scaffold0280 (1 HSPs)
scaffold0280 (89-179)||(19030-19120)
[»] scaffold1895 (2 HSPs)
scaffold1895 (128-221)||(944-1037)
scaffold1895 (28-108)||(1036-1116)
[»] scaffold0010 (2 HSPs)
scaffold0010 (90-179)||(23494-23583)
scaffold0010 (90-179)||(242335-242424)
[»] scaffold0372 (1 HSPs)
scaffold0372 (91-179)||(4840-4928)
[»] scaffold0346 (1 HSPs)
scaffold0346 (89-205)||(15374-15490)
[»] scaffold0342 (1 HSPs)
scaffold0342 (90-146)||(7042-7098)
[»] scaffold0284 (1 HSPs)
scaffold0284 (91-179)||(18633-18721)
[»] scaffold1552 (1 HSPs)
scaffold1552 (98-175)||(639-716)
[»] scaffold0439 (2 HSPs)
scaffold0439 (98-179)||(2174-2255)
scaffold0439 (98-149)||(10064-10115)
[»] scaffold0184 (1 HSPs)
scaffold0184 (90-147)||(3995-4052)
[»] scaffold0171 (1 HSPs)
scaffold0171 (90-179)||(35249-35338)
[»] scaffold0132 (1 HSPs)
scaffold0132 (90-179)||(36583-36672)
[»] scaffold0371 (1 HSPs)
scaffold0371 (93-149)||(15618-15674)
[»] scaffold0028 (1 HSPs)
scaffold0028 (91-179)||(58457-58545)
[»] scaffold0130 (1 HSPs)
scaffold0130 (90-149)||(5769-5828)
[»] scaffold0546 (1 HSPs)
scaffold0546 (91-149)||(2178-2236)
[»] scaffold0334 (1 HSPs)
scaffold0334 (94-179)||(18099-18184)
[»] scaffold0015 (1 HSPs)
scaffold0015 (90-179)||(192055-192144)
[»] scaffold0034 (1 HSPs)
scaffold0034 (93-149)||(16432-16488)
[»] scaffold0138 (1 HSPs)
scaffold0138 (89-179)||(29946-30036)
[»] scaffold0637 (1 HSPs)
scaffold0637 (90-179)||(8849-8938)
[»] scaffold0064 (1 HSPs)
scaffold0064 (189-230)||(64350-64391)


Alignment Details
Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 15041457 - 15041237
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15041457 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 15041358  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 209  Q
    | | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  15041357 ttgcgaggcgagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaggttcaatctcattctaagttatc 15041258  T
Q  210 atctaatctttattaaacatc 230  Q
    |||||| ||||||||||||||    
T  15041257 atctaacctttattaaacatc 15041237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 19863202 - 19863403
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| || |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  19863202 taggtctcattactacccaagggtccatctctaatcaaatgatgtgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcg 19863301  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | ||||||||||||||||||||||| |||||||    
T  19863302 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaacaaggttcaatctcattctaagttatcatttaatctt 19863401  T
Q  220 ta 221  Q
    ||    
T  19863402 ta 19863403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 22432474 - 22432684
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||| |||||||  ||| || |||||||||  || ||| ||||||||||| ||||||||||| ||| |||||     
T  22432474 taggtctcattactacccaagggtccatctcaaatcaaataatgagacacagatcgcaatatactaacttgcactcagttctggaagtgctcgcgaggcg 22432573  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||| | | | |||||||| |||||||||||||| |||||||    
T  22432574 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagttgttcaaggttaaactaggttcaatctcgttctaagttatcatttaatctt 22432673  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  22432674 taatatacatc 22432684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 16924786 - 16924566
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    |||||||| ||||||||||||||||||||||||||||   ||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||     
T  16924786 acatcatccttaggtctcattactacccaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactcacttgcactcagttctggaagtgc 16924687  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 209  Q
    ||| ||||| |||||||||||||| ||||||||||||| | |||| | |||||| |  || ||||||||||||||| |  ||||||  | ||||||||||    
T  16924686 tcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattgattattctaggttaatccaggtccaatcttgtcctaagttatc 16924587  T
Q  210 atctaatctttattaaacatc 230  Q
    ||| | |||||||||| ||||    
T  16924586 atcaattctttattaagcatc 16924566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 10 - 178
Target Start/End: Complemental strand, 31164754 - 31164586
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||      
T  31164754 acatcaacattaggtctcactactacccaggggtccatctctaatcaaaacatgcgacacaggtcgcattaaactcacttgcactcaattctggaagtac 31164655  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggt 178  Q
    ||| |||||||| |||| |||||  ||||||||||||||| ||| ||||||| ||  ||||||||||||    
T  31164654 tcgcgaggcaagggcatatgctcaccatggcgagtacaagccaggttcccaataaaggttgttctaggt 31164586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 25642080 - 25641870
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||| ||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  25642080 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagttcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 25641981  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||  ||||||||| ||||| | | | |||||||| |||||||||||||| |||||||    
T  25641980 agagcatctgctcgccgtggcgagttcaagccagattcccaacaaaggttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctt 25641881  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  25641880 taatatacatc 25641870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 16965217 - 16964997
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    |||||||| |||||| | |||||||||||||||||||   ||||||||| ||||||| ||||||| | ||||||||||||||||| | |||||||||||     
T  16965217 acatcatccttaggtattattactacccaggggtccactcctaatcaaagcatgcgacacagatcacattaaactcacttgcactaagttctggaagtgc 16965118  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 209  Q
    ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||| |  |||||||||||||||||| |  ||||||| | ||||||||||    
T  16965117 tcgtgaggcgagagcatctgctcgccatggcgagtacaagccagacttccaacattgattgttctaggttaatccaggtccaatctcgtcctaagttatc 16965018  T
Q  210 atctaatctttattaaacatc 230  Q
     || | |||||||||| ||||    
T  16965017 ttcaattctttattaagcatc 16964997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 230
Target Start/End: Original strand, 22439028 - 22439234
Alignment:
Q  24 tctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagag 123  Q
    ||||||||||||||| ||||||||||| |||| ||  |||||| |||||||||  ||  |||||||||||||| || |||||||| ||| ||||| ||||    
T  22439028 tctcattactacccaagggtccatctcaaatcgaattatgcgacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcgagag 22439127  T
Q  124 catctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttatt 223  Q
    ||||||||||  |||||||||||||| ||||||||| |||| |||||||||||||||| | | | |||||||| || ||||||||||| ||| ||||| |    
T  22439128 catctgctcgctatggcgagtacaagccagattccctacaaaagttgttctaggttaaactaggttcaatctcgttataagttatcatttaagctttaat 22439227  T
Q  224 aaacatc 230  Q
    | |||||    
T  22439228 atacatc 22439234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 230
Target Start/End: Complemental strand, 16929497 - 16929281
Alignment:
Q  10 acatcatcattaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtgg 109  Q
    |||||||| |||||| ||||||||||| |||||||||   ||||||||| ||||||| ||||||||| ||||||||    ||||||| || |  |||||     
T  16929497 acatcatccttaggtatcattactaccgaggggtccactcctaatcaaagcatgcgacacagatcgcattaaactc----gcactcagttttcaaagtgc 16929402  T
Q  110 tcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatc 209  Q
    ||| ||||| |||||||||||||| ||||||||||||| | |||| | |||||| || |||||||||||||||||| |  ||||||||| | ||||||||    
T  16929401 tcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattaattgttctaggttaatccaggtccaatctcatcccaagttatc 16929302  T
Q  210 atctaatctttattaaacatc 230  Q
    ||| | |||||||||| ||||    
T  16929301 atcaattctttattaagcatc 16929281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 19873344 - 19873488
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||| |||  |||||| |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  19873344 taggtctcattactacccaagggtccatctctaataaaatgatgcgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcg 19873443  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaa 164  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||    
T  19873444 agagcatctgctcgccatggcgagtacaagccagattccctacaa 19873488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 21739919 - 21739709
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| |||| |||  |||| || |||||||||   |  |||| ||| ||||| ||||||||||| ||| |||||     
T  21739919 taggtcacattactacctaagagtccatccctaaacaactcatgtgacacagatcgcaacattctcaattgtactcagttctggaagtgctcgcgaggcg 21739820  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||  ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  21739819 agagcatctgctcaccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 21739720  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  21739719 tagtaaacatc 21739709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 22334788 - 22334647
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||| ||||||||||||||| |||||||||||  |||||| |||||||||  ||  |||||||||| ||| ||||||||||| ||| |||||     
T  22334788 taggtctcattgctacccaggggtccaactctaatcaaattatgcgacacagatcgcaatatcctcacttgcattcagttctggaagtgctcgcgaggcg 22334689  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    |||||||||||||  ||||||||||  | |||||| ||||||    
T  22334688 agagcatctgctcaccatggcgagtttaggtcagaatcccaa 22334647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 18907330 - 18907541
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||  ||||||||||| ||| |||||     
T  18907330 taggtcacattactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacattctcatttgcactctgttctggaagtgctcgcgaggcg 18907429  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta-agttatcatctaatct 218  Q
    |||||||||||||| ||||||||   |||| |||||| ||||| | |||||||||| | ||| ||| | ||||||||||||||  |||||||  ||||||    
T  18907430 agagcatctgctcgccatggcgaaatcaagccagatttccaactaaagttgttctaagctaagccaggttcaatctcattctagggttatcagttaatct 18907529  T
Q  219 ttattaaacatc 230  Q
    ||| || |||||    
T  18907530 ttaatacacatc 18907541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 16523300 - 16523090
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | || |||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  16523300 taggtcacattactacctaaggatccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 16523201  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||||||  ||| | |||||   |||||||||| | ||| |||   |||||||| |||||| | || ||||||||||    
T  16523200 agagcatctgctcgccatggcgagtacaagctagaattccaacttaagttgttctaagctaaaccagattcaatctcgttctaaatcattatctaatctt 16523101  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  16523100 taataaacatc 16523090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 18180780 - 18180921
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||| ||| ||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| |     
T  18180780 tgcattcagttctggaagtgctcgcgaggcgagagcatctgctctccatggcgagtacaagccagatttccaactcaagttgttctatgctaaaccaggt 18180879  T
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| ||||||||||| | ||| ||||||||||| ||||||||    
T  18180880 tcactctcattctaaatcatcctctaatctttaataaacatc 18180921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 17804474 - 17804564
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  17804474 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 17804564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 27415771 - 27415681
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  27415771 tgcactcaattctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 27415681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 12496586 - 12496675
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  12496586 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 12496675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 18955591 - 18955502
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||  |||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |  ||||||| |||||    
T  18955591 gcactcaattcgagaagtgctcgcgaggcgagagcatctgctcgtcatggcgagtacaagccagattcccaactaaggttgttccaggtt 18955502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 21834767 - 21834578
Alignment:
Q  40 gggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 139  Q
    ||||||||| ||||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| ||||| ||||||||| |||| |||||    
T  21834767 gggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctactcgccatgg 21834668  T
Q  140 cgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacat 229  Q
     || |||||| |||| | ||||| | |||||||||| | |||  || | |||||||| |||||| | ||||||||||||||| |||||||    
T  21834667 tgattacaagccagaattccaactaaagttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctttaataaacat 21834578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 22429859 - 22429788
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccca 160  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||    
T  22429859 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccca 22429788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 1644983 - 1645072
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  1644983 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 1645072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 12706966 - 12707055
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  12706966 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 12707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 20907809 - 20907720
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || |||||||||||||    
T  20907809 gcactcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttctaggtt 20907720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 9482120 - 9482032
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| ||||||| ||||||||||||| |||||||| ||| |||||||| |  ||||||| |||||    
T  9482120 cactcaattctggaagtgctcgcgaggcgagagcatatgctcgtcatggcaagtacaagccaggttcccaactaaggttgttccaggtt 9482032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 16741484 - 16741556
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  16741484 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaac 16741556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 23990200 - 23990288
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||||||| ||  || ||||| |  |||||||||||||    
T  23990200 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgtcgtggcgagtacaagccaactttccaactaaggttgttctaggtt 23990288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 21702568 - 21702654
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || ||| ||||| |  ||||||| |||||    
T  21702568 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaatttccaactaaggttgttccaggtt 21702654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 19663046 - 19663135
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| || |||||||| ||| ||||| | |||||||||||| ||||||||||||||| |||| |||||||||  ||||||| |||||    
T  19663046 gcactcagttttggaagtgctcgcgaggcgatagcatctgctcgccatggcgagtacaagccagaatcccaacaaaggttgttccaggtt 19663135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 19790599 - 19790518
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| |||||||||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  19790599 ttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 19790518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 22863224 - 22863313
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22863224 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22863313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 8244140 - 8244228
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  8244140 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 8244228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 11567142 - 11567230
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  11567142 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 11567230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 14472548 - 14472620
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| || |||||||||    
T  14472548 gcactcaattctggatgtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccaaattcccaac 14472620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 23395348 - 23395436
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  23395348 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 23395436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 19870870 - 19870928
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  19870870 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 19870928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 25135499 - 25135441
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||| |||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  25135499 cactcgattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 25135441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 5616642 - 5616553
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  5616642 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 5616553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 15894326 - 15894185
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| ||||  |||      |||||||||||||| ||||||||||| ||| ||||      
T  15894326 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggacgcaaagttctcacttgcactcagttctggaagtgctcgcgaggtg 15894227  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    ||||  |||||||| |||||||||| || |||||| ||||||    
T  15894226 agagactctgctcgccatggcgagttcaggtcagaatcccaa 15894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 23657248 - 23657191
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  23657248 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 23657191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 25766972 - 25766907
Alignment:
Q  114 gaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  25766972 gaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 25766907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 1587558 - 1587470
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  1587558 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 1587470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 12618671 - 12618583
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||  | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12618671 cactcaattctggaagtgctcgcgaggcgagagcatctgctcaccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12618583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 18917093 - 18917005
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| |||||| ||| ||||| ||| |||||||||| | ||||||||||||| || ||| ||||| |  |||||||||||||    
T  18917093 cactcaattctagaagtgctcgcgaggcgagaacatctgctcgccgtggcgagtacaagccaaatttccaactaaggttgttctaggtt 18917005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 122 - 230
Target Start/End: Complemental strand, 22405860 - 22405752
Alignment:
Q  122 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||||||||| ||||||||||||||  |||||| ||| |   |||||||||| | ||| | | | |||||||| |||||| | |||||| ||||||||    
T  22405860 agcatctgctcgccatggcgagtacaacccagatttccatctcaagttgttctaagctaaacaaggttcaatctcgttctaaatcatcatccaatcttta 22405761  T
Q  222 ttaaacatc 230  Q
    |||||||||    
T  22405760 ttaaacatc 22405752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 22592624 - 22592568
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  22592624 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 22592568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27567436 - 27567348
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  27567436 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 27567348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 22059577 - 22059506
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||| ||||||||| |||| |||||| | | ||||| |||||||||||||| |||||| |||||||| ||||    
T  22059577 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccaga 22059506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 154
Target Start/End: Complemental strand, 20803370 - 20803317
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  20803370 tggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 20803317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 139
Target Start/End: Complemental strand, 27553435 - 27553386
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 139  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||    
T  27553435 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 27553386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 127; Significance: 1e-65; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 18154733 - 18154523
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||||||||||||||||  ||||||||| |||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| |||||     
T  18154733 taggtctcattactacccaatggtccatctttaatcaaatcatgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggcg 18154634  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||| |||||||    
T  18154633 agagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaagttcaatctcattctaagttatcatttaatctt 18154534  T
Q  220 tattaaacatc 230  Q
    || ||| ||||    
T  18154533 taataagcatc 18154523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 19 - 221
Target Start/End: Complemental strand, 19649382 - 19649180
Alignment:
Q  19 ttaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 118  Q
    |||||||||| ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  ||||||| |||||  ||||||||||| ||| ||| |    
T  19649382 ttaggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttacactcggttctggaagtgctcgcgagac 19649283  T
Q  119 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 218  Q
     |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||| |    
T  19649282 gagagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatat 19649183  T
Q  219 tta 221  Q
    |||    
T  19649182 tta 19649180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 24054691 - 24054901
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| |||||||||  ||  ||||||| |||||| ||||||||||| |||  || |     
T  24054691 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacagatcgcaatattctcactttcactcagttctggaagtgctcgcaagacg 24054790  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||| | | | |||||||| |||||||||||||| |||||||    
T  24054791 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctt 24054890  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  24054891 taatatacatc 24054901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 9703489 - 9703690
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||| |||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  9703489 taggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 9703588  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  9703589 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 9703688  T
Q  220 ta 221  Q
    ||    
T  9703689 ta 9703690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 11880475 - 11880685
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| ||||||||||| |||||||  |||||| ||| |||||   |  |||||||||||||| ||||||||||| ||  |||||     
T  11880475 taggtcacattactacccaagggtccatctcaaatcaaattatgcgacacatatcgcaacatcctcacttgcactcagttctggaagtgctcacgaggcg 11880574  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  11880575 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 11880674  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  11880675 taataaacatc 11880685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 12321639 - 12321429
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||| ||||||||||| ||| |||||     
T  12321639 taggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgctacattctcatttgcactcagttctggaagtgctcgcgaggcg 12321540  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||  || | |||||||||||||| ||||||||||||||||    
T  12321539 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaatcaggttcaatctcattctaggttatcatctaatctt 12321440  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  12321439 taataaacatc 12321429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 17137960 - 17137750
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  17137960 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 17137861  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||||||||||| |||||||||||||    
T  17137860 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctt 17137761  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  17137760 taataaacatc 17137750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 12187236 - 12187446
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| |  |||||||||||||||||  || || | | | ||| |  ||  |||||||||||||| ||||||||||| ||| |||||     
T  12187236 taggtctcattactacctaatggtccatctctaatcaattcaagcaacatatatcactatattctcacttgcactcagttctggaagtgctcgcgaggcg 12187335  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | |||  || | ||||||||||||||||||||||| |||||||    
T  12187336 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaatcaggttcaatctcattctaagttatcatttaatctt 12187435  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  12187436 taataaacatc 12187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 10508916 - 10508778
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||| || |||||||||||| |  |||||| || |||||     
T  10508916 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaccagccagattcccaactaatgttgttataagttaaa 10508817  T
Q  183 ccaagctcaatctcattctaagttatcatctaatcttta 221  Q
     || | ||||||||||||||||||||||| |||||||||    
T  10508816 tcaggttcaatctcattctaagttatcatttaatcttta 10508778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 14430101 - 14430311
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  14430101 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 14430200  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  14430201 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 14430300  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  14430301 taataaacatc 14430311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 2760413 - 2760560
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| ||||||||| |||| |||| |||||||||| || ||| |||||   |||||||| | | |||     
T  2760413 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgacgagtacaagccatatttccaactccagttgttcgaagctaaa 2760512  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | |||||||| |||||| | ||||||||||||||||||||||||    
T  2760513 ccaggttcaatctcgttctaaatcatcatctaatctttattaaacatc 2760560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 18886 - 18814
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  18886 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaac 18814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 13149433 - 13149521
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13149433 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13149521  T

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Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 12318404 - 12318494
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||| |||||||||||| |  ||||||| |||||    
T  12318404 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatagcgagtacaagccagattcccaactaaggttgttccaggtt 12318494  T

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Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 48593285 - 48593212
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  48593285 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 48593212  T

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Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 11312925 - 11313015
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||  ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11312925 tgcactcagttctggaagtgctcccgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11313015  T

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Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 11987489 - 11987579
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11987489 tgcactcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11987579  T

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Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 13635298 - 13635208
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||| ||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13635298 tgcactcagttctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13635208  T

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Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 15605101 - 15605011
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||| |||||||||  |||||||||||||||||||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  15605101 tgcactcagttctagaagtggtcacgaggcaagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 15605011  T

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Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 26292673 - 26292762
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  26292673 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 26292762  T

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Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 12715144 - 12715232
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12715144 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12715232  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 6801490 - 6801579
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || | ||||||| |  ||||||| |||||    
T  6801490 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgttccaggtt 6801579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 9593622 - 9593695
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||||| |||||    
T  9593622 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaac 9593695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 9644585 - 9644658
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||||| |||||    
T  9644585 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaac 9644658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 18557257 - 18557338
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  18557257 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactacggttgttctaggtt 18557338  T

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Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 12718948 - 12719036
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12718948 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12719036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 12723859 - 12723947
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12723859 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12723947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 16438862 - 16438790
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||| ||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  16438862 gcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 16438790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 16907027 - 16906939
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16907027 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16906939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 18279683 - 18279771
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  18279683 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 18279771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 18283646 - 18283734
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  18283646 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 18283734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 8917704 - 8917768
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||| ||||||||||| ||| |||||||||||||| ||||| ||| ||||||||||| ||||    
T  8917704 gcactcagttctggaagtgctcgcgaggcaagagcatcagctcgccattgcgagtacaagccaga 8917768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 15728603 - 15728691
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  15728603 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 15728691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16114521 - 16114609
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| ||||||| |||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16114521 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16114609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16117674 - 16117762
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| ||||||| |||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16117674 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16117762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 11262605 - 11262695
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11262605 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11262695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 11548096 - 11548006
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11548096 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11548006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 11554692 - 11554602
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  11554692 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 11554602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 16275772 - 16275858
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||| ||| ||||| |||||||||| ||| |||||| |||||||| ||  |||||||| |  ||||||| |||||    
T  16275772 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcaagtacaagccaacttcccaactaaggttgttccaggtt 16275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 14217192 - 14217281
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||  |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  14217192 gcactcagttctggaagtgctcgcgaggtgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 14217281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 15580968 - 15581025
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  15580968 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 15581025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 9445978 - 9445930
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  9445978 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 9445930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 12692782 - 12692862
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  12692782 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 12692862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 13462039 - 13462103
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||| ||||||||| ||||    
T  13462039 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggtgagtacaagccaga 13462103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 14953484 - 14953564
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  14953484 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 14953564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 230
Target Start/End: Original strand, 15211759 - 15211861
Alignment:
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| |||||||||||||||  ||| ||||||| | ||||  |||  | ||| ||| | ||||||||||||||||||||||| ||||| ||  |||||    
T  15211759 tgctcgccatggcgagtacaagctagaatcccaactaaagttaatctgagctaaaccaggttcaatctcattctaagttatcatttaatcatttataaac 15211858  T
Q  228 atc 230  Q
    |||    
T  15211859 atc 15211861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 35151888 - 35151942
Alignment:
Q  95 caattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||| |||||||| ||| ||||| |||||||||||||  |||||||||||||||    
T  35151888 caattttggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaag 35151942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 25039038 - 25038949
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||  ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  25039038 gcactccaatctggaagtgctcgcgaggcgagagtatctactcaccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 25038949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 14959450 - 14959530
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||| ||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  14959450 tctgaaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 14959530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 20569416 - 20569368
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    |||| |||||| ||| ||||| |||||||||||||| ||||||||||||    
T  20569416 ttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 20569368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 127; Significance: 1e-65; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 21714772 - 21714982
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| |||||     
T  21714772 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcg 21714871  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  21714872 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 21714971  T
Q  220 tattaaacatc 230  Q
    || ||| ||||    
T  21714972 taataagcatc 21714982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 228
Target Start/End: Complemental strand, 42865108 - 42864900
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  42865108 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 42865009  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  42865008 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 42864909  T
Q  220 tattaaaca 228  Q
    || ||||||    
T  42864908 taataaaca 42864900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 221
Target Start/End: Complemental strand, 22468592 - 22468392
Alignment:
Q  21 aggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaa 120  Q
    |||||||| ||||||||| |||||||||||||||| ||  |||||| ||| |||||  ||  |||||||||||||| ||||||||||| ||| ||||| |    
T  22468592 aggtctcaatactacccaagggtccatctctaatcgaattatgcgacacatatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggcga 22468493  T
Q  121 gagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttt 220  Q
    |||||||||||| ||||| |||||||||| |||||||||||| |  ||||||||| ||||| ||  | |||||||| |||||||||||||| ||||||||    
T  22468492 gagcatctgctcttcatgtcgagtacaagccagattcccaactaatgttgttctaagttaaacctggttcaatctctttctaagttatcatttaatcttt 22468393  T
Q  221 a 221  Q
    |    
T  22468392 a 22468392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 27 - 230
Target Start/End: Complemental strand, 21787932 - 21787729
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||| ||||| ||| ||||| |||||||    
T  21787932 cattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaatttctcacttgcactcagttctgaaagtgctcgcgaggcgagagcat 21787833  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||||||| |||||||||||| || |||||||||||| |  |||||| || | ||| ||| | ||||||||||||||||||||||| ||||||||||||||    
T  21787832 ctgctcgccatggcgagtacgagccagattcccaactaatgttgttataagctaaaccaggttcaatctcattctaagttatcatataatctttattaaa 21787733  T
Q  227 catc 230  Q
    ||||    
T  21787732 catc 21787729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 22831275 - 22831065
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| |||| |||  ||||||| |||||||||   |  |||| ||||||||| ||| ||||||| ||| |||||     
T  22831275 taggtcacattactacctaagagtccatccctaaacaagtcatgcgacacagatcgcaacattctcaattgcactcagttcaggaagtgctcgcgaggcg 22831176  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  22831175 agagcatctgctcgccatggcgagtacaagccagattctcaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 22831076  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  22831075 taataaacatc 22831065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 21022860 - 21023070
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | |||||||||  |||||||| || || | ||||||| ||  |  |||||| | ||| | ||||||||||| ||| |||||     
T  21022860 taggtcacattactacctaagggtccatccttaatcaaatcaagcaacacagatcacgacattctcactagtactgagttctggaagtgctcgcgaggcg 21022959  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || |||| ||||||| |  ||||||||| | ||| ||| | ||||||||||||||||| |||||||||||||    
T  21022960 agagcatctgctcgccatggcgagtacgagccagaatcccaactaaggttgttctaagctaaaccaggttcaatctcattctaagtcatcatctaatctt 21023059  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  21023060 taataaacatc 21023070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 6152077 - 6152287
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| |||||||||   |  || || |||| ||| ||||||||||| ||| |||||     
T  6152077 taggtcacattactacctaagagtccatccctaatcaattcatgcgacacagatcgcaacatcctaacatgcattcagttctggaagtgctcgcgaggcg 6152176  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||  ||||||||||||||| |||||||    
T  6152177 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatcctattctaagttatcatttaatctt 6152276  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  6152277 taataaacatc 6152287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 88 - 230
Target Start/End: Complemental strand, 3472755 - 3472613
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| |    
T  3472755 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccagg 3472656  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     ||||||||||||||| | ||||||||||||||| ||||||||    
T  3472655 ttcaatctcattctaaatcatcatctaatctttaataaacatc 3472613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 20091370 - 20091229
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||| |||||||  |||||| |||||||||  ||  |||| ||||||||| ||||||||||| ||| ||||      
T  20091370 taggtctcattactacccaagggtccatctcaaatcaaattatgcgacacagatcgcaatatcctcatttgcactcagttctggaagtgctcgcgaggtg 20091271  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    ||| |||||||||| |||||||||| || |||||| ||||||    
T  20091270 agaacatctgctcgccatggcgagttcaggtcagaatcccaa 20091229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 230
Target Start/End: Complemental strand, 18182011 - 18181808
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||| | | ||||||| ||||||||   |||||| |||||||||   |  || ||||||||||| ||||||||||| |||  |||| |||||||    
T  18182011 cattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcaaggcgagagcat 18181912  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||||||| ||| ||||||||||| |||| | ||||| | |||||||||| | ||| ||| | |||||| | |||||||| ||||||||||| ||| ||||    
T  18181911 ctgctcgccatagcgagtacaagccagaattccaactaaagttgttctaagctaaaccaggttcaatcccgttctaagtcatcatctaatcattaataaa 18181812  T
Q  227 catc 230  Q
    ||||    
T  18181811 catc 18181808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 8761460 - 8761329
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagct 189  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||  |||| | |||||||||| | ||||||| | |    
T  8761460 gcactcagttctggaagtgttcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaatccaggtt 8761361  T
Q  190 caatctcattctaagttatcatctaatcttta 221  Q
    ||||||  |||||| | ||| |||||||||||    
T  8761360 caatcttgttctaaatcatcctctaatcttta 8761329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 20138364 - 20138450
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||| ||||||||||||||||||||||| |  |||||||| ||||    
T  20138364 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagtcagattcccaactaaggttgttctgggtt 20138450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 36819137 - 36819047
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  36819137 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 36819047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 16080273 - 16080200
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  16080273 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 16080200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 17678416 - 17678326
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  17678416 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 17678326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 21305591 - 21305681
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  21305591 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 21305681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 33797810 - 33797900
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| || ||||||||| |  ||||||| |||||    
T  33797810 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaattcccaactaaggttgttccaggtt 33797900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 12647147 - 12647219
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  12647147 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 12647219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 20228636 - 20228548
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||| ||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  20228636 cactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 20228548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 230
Target Start/End: Complemental strand, 22432597 - 22432470
Alignment:
Q  103 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta 202  Q
    |||||| ||| ||||| | |||||||||||| ||||||||| ||| | |||| ||||||| | |||||||||| | ||| |||   |||||||  |||||    
T  22432597 gaagtgctcgcgaggcgaaagcatctgctcgccatggcgaggacaggccagaatcccaactaaagttgttctaagctaaaccagattcaatcttgttcta 22432498  T
Q  203 agttatcatctaatctttattaaacatc 230  Q
    ||| ||||||||||||||| ||||||||    
T  22432497 agtcatcatctaatctttaataaacatc 22432470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 18882645 - 18882734
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| |||| |||||| ||| |||||||||||||||||||| ||||||||||||||| || | ||||||| |  ||||||| |||||    
T  18882645 gcactcagttcttgaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgttccaggtt 18882734  T

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Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 46975745 - 46975834
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||| |  ||||||| |||||    
T  46975745 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagaaagaatcccaactaaggttgttccaggtt 46975834  T

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Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 16375284 - 16375196
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  16375284 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 16375196  T

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Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 21407635 - 21407723
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  21407635 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 21407723  T

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Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 21615718 - 21615774
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  21615718 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 21615774  T

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Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 52639821 - 52639909
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  52639821 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 52639909  T

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Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 22449100 - 22449037
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  22449100 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 22449037  T

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Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 19212144 - 19212234
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||| ||||||||| ||||||| |||| |  ||||||| |||||    
T  19212144 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattctcaactaaggttgttccaggtt 19212234  T

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Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 45489571 - 45489482
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  45489571 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactcgccagatttccaactaaggttgttccaggtt 45489482  T

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Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 23819126 - 23819063
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  23819126 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 23819063  T

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Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 24782929 - 24782839
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  24782929 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 24782839  T

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Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23763489 - 23763578
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  23763489 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 23763578  T

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Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 45310194 - 45310137
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    ||||||| ||||| ||||| ||| ||||| |||||||||||||| |||||||||||||    
T  45310194 gcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 45310137  T

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Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 21438081 - 21438161
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  21438081 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 21438161  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 48603739 - 48603795
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgc 76  Q
    |||||| || ||||||| ||||||||||||||||||||  ||||| | |||||||||    
T  48603739 taggtcacaatactacctaggggtccatctctaatcaattcatgcaacacagatcgc 48603795  T

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Target: chr8 (Bit Score: 119; Significance: 6e-61; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 21395879 - 21395669
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||| ||| ||| |||||     
T  21395879 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcg 21395780  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  21395779 agagcatctgcttgccttggcgagtacaagccagattcccaacaatggttgttctaagttaacccaggttcaatctcattctaagttatcatataatctt 21395680  T
Q  220 tattaaacatc 230  Q
    |||||| ||||    
T  21395679 tattaagcatc 21395669  T

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Target: chr8; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 21790372 - 21790162
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||| ||| ||| |||||     
T  21790372 taggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcg 21790273  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||| | | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  21790272 agagcatctgcttgccttggcgagtacaagccagattcccaacaatggttgttctaagttaacccaggttcaatctcattctaagttatcatataatctt 21790173  T
Q  220 tattaaacatc 230  Q
    |||||| ||||    
T  21790172 tattaagcatc 21790162  T

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Target: chr8; HSP #3
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 21389347 - 21389139
Alignment:
Q  22 ggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaag 121  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||   |||||||||||||| ||||||||||| ||| || || ||    
T  21389347 ggtctcattactacccaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaagcgag 21389248  T
Q  122 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||||||||  | ||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||||    
T  21389247 agcatctgctcaccttggcgagtacaagccagattcccaacaatggttgttctaagttaaaccaggttcaatctcattctaagttatcatataatcttta 21389148  T
Q  222 ttaaacatc 230  Q
    |||| ||||    
T  21389147 ttaagcatc 21389139  T

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Target: chr8; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 19899317 - 19899527
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  19899317 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 19899416  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  19899417 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 19899516  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  19899517 taataaacatc 19899527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 17353834 - 17353633
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| ||| |||||  ||  |||||||||||||| ||||| ||||| ||| |||||     
T  17353834 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacaaatcgcaatatcctcacttgcactcagttctgcaagtgctcgcgaggcg 17353735  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||| | | | |||||||| ||| |||||||||| |||||||    
T  17353734 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaagctgttctaggttaaactaggttcaatctcgttcaaagttatcatttaatctt 17353635  T
Q  220 ta 221  Q
    ||    
T  17353634 ta 17353633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 16184950 - 16185160
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||| ||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  16184950 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacaggtcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 16185049  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| | |||||||||| |  || ||| | ||||||||||||||||||||||| |||||||    
T  16185050 agagcatctgctcgccatggcgagtacaagccagattctcaactaaagttgttctaagccaaaccaggttcaatctcattctaagttatcatttaatctt 16185149  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  16185150 taataaacatc 16185160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 19976667 - 19976877
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| |||| ||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  19976667 taggtcacattactacctagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 19976766  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||| |||||||| ||||||||||||||| |  ||||||||| | ||| ||| | |||||| |||||||||||||||| ||||| |    
T  19976767 agagcatctgctcgccattgcgagtactagtcagattcccaactaatgttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcat 19976866  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  19976867 taataaacatc 19976877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 28 - 230
Target Start/End: Complemental strand, 21168610 - 21168408
Alignment:
Q  28 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 127  Q
    |||||||||||  ||||||||||||||||||  |||||| |||||||||   |  ||||||||||||||  || ||||||| | | ||||| ||||||||    
T  21168610 attactacccaaaggtccatctctaatcaaactatgcgacacagatcgcaacatcctcacttgcactcagatcaggaagtgcttgcgaggcgagagcatc 21168511  T
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| ||||||||||||||| |||||||||||| | |||||||| | | ||| ||| | ||||||||||||||||||||||||||||||||| |||||    
T  21168510 tgctcgccatggcgagtacaagccagattcccaactaaagttgttcaaagctaaaccaggttcaatctcattctaagttatcatctaatctttaataaac 21168411  T
Q  228 atc 230  Q
    |||    
T  21168410 atc 21168408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 223
Target Start/End: Original strand, 24755943 - 24756146
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||||||||| ||| |||||     
T  24755943 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcg 24756042  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  24756043 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 24756142  T
Q  220 tatt 223  Q
    ||||    
T  24756143 tatt 24756146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 19983315 - 19983525
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||| ||||||||||||||||  |||||| |||||||||   |  |||| ||||||||| || |||||||| ||| |||||     
T  19983315 taggtcacattactacccagggttccatctctaatcaaattatgcgacacagatcgcaacatcctcatttgcactcagttttggaagtgctcgcgaggcg 19983414  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||  |||||||||||| ||||||||||||||| |  ||||||||| | ||| ||| | |||||| |||||||||||||||| ||||| |    
T  19983415 agagcatctgctcaccatggcgagtactagtcagattcccaactaatgttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcat 19983514  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  19983515 taataaacatc 19983525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 30643188 - 30642978
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||    ||||| |||||||||   |  || ||||||| ||||||||||||||| ||| ||||||    
T  30643188 taggtcacattactacctaagggtccaaccctaatcaatttgtgcgaaacagatcgcaacatcctaacttgcattcaattctggaagtgctcgcgaggca 30643089  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||  |||| | |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  30643088 agagcatctgctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 30642989  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  30642988 taataaacatc 30642978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 22010513 - 22010366
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||   |||||||||| | |||     
T  22010513 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaa 22010414  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | |||||||| |||||| | ||||||||||||||||||||||||    
T  22010413 ccaggttcaatctcgttctaaatcatcatctaatctttattaaacatc 22010366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 23776732 - 23776521
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagat-cgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 118  Q
    |||||| |||||||||| | | |||||||||||| ||||  |||||| |||||| |||  ||  ||  |||||||||| ||||| ||||| ||| |||||    
T  23776732 taggtcacattactacctaagtgtccatctctaaccaaattatgcgacacagattcgcaatatcctagcttgcactcagttctgaaagtgctcgcgaggc 23776633  T
Q  119 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 218  Q
     ||||||||||||||  || ||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||||||||||||||||| ||||||    
T  23776632 gagagcatctgctcgcgatagcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatct 23776533  T
Q  219 ttattaaacatc 230  Q
    ||| ||| ||||    
T  23776532 ttaataatcatc 23776521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 20465873 - 20465726
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| | || ||||||| | |||     
T  20465873 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaagctgttctaagctaaa 20465774  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | |||||||| |||||||| ||||||||||||||| | ||||||    
T  20465773 ccaggttcaatctcgttctaagtcatcatctaatctttaattaacatc 20465726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 377500 - 377710
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| ||||||||  || || | ||||||| ||  |  |||| | ||||||| ||||||||||| ||| ||| |     
T  377500 taggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcacgacattctcattagcactcagttctggaagtgctcgcgagacg 377599  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| | |||| ||||| | ||| ||| | |||||||||||||||||||| || |||||||    
T  377600 agagcatctgctcgccatggcgagtacaagccagaattccaactaaagttattctaagctaaaccaggttcaatctcattctaagttataatttaatctt 377699  T
Q  220 tattaaacatc 230  Q
    ||  |||||||    
T  377700 taacaaacatc 377710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 230
Target Start/End: Complemental strand, 19259432 - 19259288
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||| |||||| |||| | ||||| |  ||||||||| | ||| |||    
T  19259432 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgaatacaagccagaattccaactaaggttgttctaagctaaacca 19259333  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     | | ||||||||||||||| ||||| ||||||||| ||||||||    
T  19259332 ggtttaatctcattctaagtcatcatttaatctttaataaacatc 19259288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 15602914 - 15602704
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||  | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  15602914 taggtcacattactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattaagttctggaagtgctcgcgaggcg 15602815  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||  |||||| | |||||||||||||    
T  15602814 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatcttgttctaaatcatcatctaatctt 15602715  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  15602714 taataaacatc 15602704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 15611366 - 15611156
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||  | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  15611366 taggtcacattactacttaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattaagttctggaagtgctcgcgaggcg 15611267  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||  |||||| | |||||||||||||    
T  15611266 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatcttgttctaaatcatcatctaatctt 15611167  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  15611166 taataaacatc 15611156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 17926604 - 17926394
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| | ||||| ||| |||||| |||| ||| |||||     
T  17926604 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaatttgcattcagttctgggagtgctcgcgaggcg 17926505  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  17926504 agagcatctgctcgccatggcgagtacaagccataattccaacttaagttgttctaagataaaccaggttcaatctcgttctaaatcatcatctaatctt 17926405  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  17926404 taataaacatc 17926394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 162
Target Start/End: Complemental strand, 23846842 - 23846771
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  23846842 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 23846771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 15532166 - 15532255
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  15532166 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcggcatggcgagtacaagccagaatcccaactaaggttgttctaggtt 15532255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 24434065 - 24433976
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  24434065 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 24433976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 22113555 - 22113467
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22113555 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22113467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 22135058 - 22134970
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22135058 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22134970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 16410052 - 16409942
Alignment:
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||| |||| |||| | ||||| | |||| ||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  16410052 agagcatctgctcgccatggcgagttcaagccagaattccaactaaagttattctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 16409953  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  16409952 taataaacatc 16409942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 15538726 - 15538815
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  15538726 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 15538815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 21161947 - 21161842
Alignment:
Q  28 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 127  Q
    |||||||||||  ||||||||||||||||||  || ||| |||||||||   |  |||||||||||||| ||||||||||| ||| ||||| ||||||||    
T  21161947 attactacccaaaggtccatctctaatcaaactatacgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatc 21161848  T
Q  128 tgctcg 133  Q
    ||||||    
T  21161847 tgctcg 21161842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 22166208 - 22166120
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| | | ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  22166208 cactcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 22166120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 90 - 221
Target Start/End: Complemental strand, 20856252 - 20856121
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagct 189  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| |  ||||||||| | ||| ||| | |    
T  20856252 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattgcaactaaggttgttctaagctaaaccaggtt 20856153  T
Q  190 caatctcattctaagttatcatctaatcttta 221  Q
    ||||||  || ||| | |||||||||||||||    
T  20856152 caatcttgttttaaatcatcatctaatcttta 20856121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 16231304 - 16231214
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  16231304 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 16231214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 22028834 - 22028924
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||| | |||||||||||| || |||||||||||| |  ||||||| |||||    
T  22028834 tgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtactagccagattcccaactaaggttgttccaggtt 22028924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23834450 - 23834540
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||| ||||||||||| ||||||| |||| |  ||||||| |||||    
T  23834450 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatcgcgagtacaagccagattctcaactaaggttgttccaggtt 23834540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 17828411 - 17828347
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||    
T  17828411 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 17828347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 43252092 - 43252180
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  43252092 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 43252180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 17055214 - 17055128
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||| |||||| ||  || ||||| |  |||||||||||||    
T  17055214 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgactacaagccaactttccaactaaggttgttctaggtt 17055128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 16861155 - 16861095
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| |||||||||||||||    
T  16861155 tgcactcagttctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaag 16861095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 22045145 - 22045225
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||||||||||||| |||| | |||||||| |||||||||||| |  ||||||| |||||    
T  22045145 tctggaagtgctcgcgaggcgagagcatctgctcgccatgacaagtacaagccagattcccaactaaggttgttccaggtt 22045225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 32598959 - 32599015
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| |||  |||| |||||||||||||| |||||||||||||||    
T  32598959 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaag 32599015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 32605491 - 32605547
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| |||  |||| |||||||||||||| |||||||||||||||    
T  32605491 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaag 32605547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 39094769 - 39094713
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  39094769 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 39094713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 18619756 - 18619845
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| |||| |||||||||| |||| | ||||  |  |||||||||||||    
T  18619756 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgacgagtacaagccagaattccaagtaaggttgttctaggtt 18619845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 20527727 - 20527816
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  20527727 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 20527816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 30308582 - 30308493
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||  ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  30308582 gcactcagttctggaagtgctcgcgaggcgagagcattagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 30308493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 21972411 - 21972355
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    |||||||||||||||||| ||| | ||| |||||||||||||| | |||||||||||    
T  21972411 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtaca 21972355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 21976496 - 21976440
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    |||||||||||||||||| ||| | ||| |||||||||||||| | |||||||||||    
T  21976496 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtaca 21976440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 230
Target Start/End: Complemental strand, 21161837 - 21161802
Alignment:
Q  195 tcattctaagttatcatctaatctttattaaacatc 230  Q
    ||||||||||||||||||||||||||| ||||||||    
T  21161837 tcattctaagttatcatctaatctttaataaacatc 21161802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 114 - 161
Target Start/End: Original strand, 22875385 - 22875432
Alignment:
Q  114 gaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    ||||| ||||| ||||||||||||||||||| || |||||||||||||    
T  22875385 gaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaa 22875432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 19278110 - 19278023
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| | |||| |||||||| ||  || ||||| |  |||||||||||||    
T  19278110 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggc-agtacaagccaactttccaactaaggttgttctaggtt 19278023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 48357 - 48147
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  ||| || |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  48357 taggtctcattactacccaagggtccatctctaatcaaattatgtgacacagatcgcaatattcttacttgcactcagttctggaagtgctcgcgaggcg 48258  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  48257 agagcatctgctcgccatggcgagtacaagccagattcctaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 48158  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  48157 taatatacatc 48147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 115; Significance: 1e-58; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 70018 - 70228
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  70018 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 70117  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  | ||||||||||||| ||| | |||||||| |||||||||||||| |||||||    
T  70118 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggctgttctaggttaaaccaggttcaatctcgttctaagttatcatttaatctt 70217  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  70218 taatatacatc 70228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 10413 - 10323
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  10413 tgcactcatttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 10323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 58246 - 58157
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  58246 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 58157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 20205 - 20406
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||| ||||||||| ||||||| ||||||  | |||  |||||||||||||| ||||||||||| ||| |||||     
T  20205 taggtctcattactacccaagggtccatccctaatcaaatcatgcgacacagattacattatcctcacttgcactcagttctggaagtgctcgcgaggcg 20304  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||| ||||||||| |||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||    
T  20305 agagcatctgctcgccatgacgagtacaactcagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctt 20404  T
Q  220 ta 221  Q
    ||    
T  20405 ta 20406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 9e-57; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 26704291 - 26704498
Alignment:
Q  23 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 122  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||| ||||||| | ||   || ||||||||||| ||||||||||| ||| ||||| | |    
T  26704291 gtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaa 26704390  T
Q  123 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttat 222  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||     
T  26704391 gcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaa 26704490  T
Q  223 taaacatc 230  Q
    ||| ||||    
T  26704491 taagcatc 26704498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 23 - 230
Target Start/End: Original strand, 26974024 - 26974231
Alignment:
Q  23 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 122  Q
    |||||||||||||||| ||||||||| ||||||||| ||||||| ||||||| | ||   || ||||||||||| ||||||||||| ||| ||||| | |    
T  26974024 gtctcattactacccaagggtccatccctaatcaaatcatgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaa 26974123  T
Q  123 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttat 222  Q
    ||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||     
T  26974124 gcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaa 26974223  T
Q  223 taaacatc 230  Q
    ||| ||||    
T  26974224 taagcatc 26974231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 37724126 - 37724327
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||| ||||||| | |||||||||||||||||||  |||||| |||||||||  |   |||||||||||||| ||||||||||| ||| |||||     
T  37724126 taggtctcaatactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatctcctcacttgcactcagttctggaagtgctcgcgaggcg 37724225  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||| || ||||||||||||||  ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  37724226 agagcatctgctcgccatggcgagtaccagccagattcccaacaaatgttgttctaagttaaaccaggttcaatctcattctaagttatcatttaatctt 37724325  T
Q  220 ta 221  Q
    ||    
T  37724326 ta 37724327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 211
Target Start/End: Original strand, 14079370 - 14079561
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| |||| |||||| ||| |||||     
T  14079370 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctagaagtgctcgcgaggcg 14079469  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcat 211  Q
    ||||||| |||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||||||||||    
T  14079470 agagcatttgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcat 14079561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 22032538 - 22032748
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||||||||||||  || || | ||| ||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  22032538 taggtctcattactacctaagggtccatctctaatcaattcaagcaacacatatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 22032637  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  22032638 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 22032737  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  22032738 taataaacatc 22032748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 30 - 230
Target Start/End: Original strand, 23512339 - 23512539
Alignment:
Q  30 tactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctg 129  Q
    ||||||||| ||||||| |||||||||||  |||||| |||||||||   |  || || |||||||| ||||||||||| ||| ||||| ||||||||||    
T  23512339 tactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacatcctaacatgcactcagttctggaagtgctcgcgaggcgagagcatctg 23512438  T
Q  130 ctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacat 229  Q
    |||| ||||||||||||||| ||||||  |||| | |||||||||| | ||| ||| | ||||||||| ||||||| ||||||||||||||| |||||||    
T  23512439 ctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacat 23512538  T
Q  230 c 230  Q
    |    
T  23512539 c 23512539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 23201590 - 23201792
Alignment:
Q  20 taggtctcattactaccc-aggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggc 118  Q
    |||||||||||||||||| | |||||||||||||| ||||  |||||| |||||||||  ||  |||||||||||||| ||||  ||||| ||| |||||    
T  23201590 taggtctcattactaccccaagggtccatctctaaacaaattatgcgacacagatcgcaatatcctcacttgcactcagttctaaaagtgctcgcgaggc 23201689  T
Q  119 aagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 218  Q
     |||||||||||||| ||||||||||||| | |||||||||||| |  |||||| || | ||| ||| | ||||||||||| ||||||||||| ||||||    
T  23201690 gagagcatctgctcgccatggcgagtacaggccagattcccaactaatgttgttataagctaaaccaggttcaatctcattataagttatcatttaatct 23201789  T
Q  219 tta 221  Q
    |||    
T  23201790 tta 23201792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 18769901 - 18769691
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  ||||||||| |||| ||||||||||| ||| || ||     
T  18769901 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcactacattctcacttgcgctcagttctggaagtgctcgcgacgcg 18769802  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||| ||| | | |||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  18769801 agagcatctgctcgccacggcgagtacaagccagaatcctaactaaaattgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 18769702  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  18769701 taataaacatc 18769691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 23501242 - 23501032
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| ||||||||||||||||||   || ||| |||||||||   |  ||||||| |||||| ||||||||||| ||| ||||      
T  23501242 taggtctcattactacccaagggtccatctctaatcaacttatacgacacagatcgcaacattctcactttcactcagttctggaagtgctcgcgaggtg 23501143  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | ||||||||  |||||| |||||| |||| ||    
T  23501142 agagcatctgctcgccatggcgagtacaagcaagattcccaactaatgttgttctaagctaaaccaggttcaatctcggtctaagctatcatttaatatt 23501043  T
Q  220 tattaaacatc 230  Q
    || ||| ||||    
T  23501042 taataagcatc 23501032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 221
Target Start/End: Original strand, 23572364 - 23572502
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| |||||||||||  || ||||| |||||||||||||| ||||| ||||||||| |||| ||||||| | |||||||||| | |||     
T  23572364 ctcacttgcactcagttctggaagtgcgcgcgaggcgagagcatctgctcgccatggggagtacaagccagaatcccaactaaagttgttctaagctaaa 23572463  T
Q  183 ccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    ||| | ||||||||||||||||||||||| |||||||||    
T  23572464 ccaggttcaatctcattctaagttatcatttaatcttta 23572502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 21366563 - 21366353
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  21366563 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 21366464  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | |||  || | |||||||| |||||| | |||||||||||||    
T  21366463 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctt 21366364  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  21366363 taataaacatc 21366353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 230
Target Start/End: Original strand, 21887124 - 21887256
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 197  Q
    ||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||  || | ||| |||||    
T  21887124 ttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaagcaggttcattctca 21887223  T
Q  198 ttctaagttatcatctaatctttattaaacatc 230  Q
    |||||||||||||| ||||||||| ||||||||    
T  21887224 ttctaagttatcatttaatctttaataaacatc 21887256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 20805837 - 20805979
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| |    
T  20805837 ttgcattcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaaccagg 20805936  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     |||||||| |||||| | ||||||||||||||| ||||||||    
T  20805937 ttcaatctcgttctaaatcatcatctaatctttaataaacatc 20805979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 23535418 - 23535328
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |  ||||||| |||||    
T  23535418 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagattcccaactaaggttgttccaggtt 23535328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 144
Target Start/End: Original strand, 21873471 - 21873595
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||| ||||||||||||||  |||||| ||||||| |  ||  || ||||||||||| ||||| ||||| ||| |||||     
T  21873471 taggtcacattactacccaagggttcatctctaatcaaattatgcgacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcg 21873570  T
Q  120 agagcatctgctcgtcatggcgagt 144  Q
    |||||||||||||| ||||||||||    
T  21873571 agagcatctgctcgccatggcgagt 21873595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 17410724 - 17410814
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  17410724 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 17410814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 20910629 - 20910539
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  20910629 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 20910539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 89 - 162
Target Start/End: Original strand, 18356604 - 18356677
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  18356604 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaac 18356677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 21885016 - 21884928
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  21885016 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 21884928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 21340595 - 21340506
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  21340595 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 21340506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 26665959 - 26665870
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26665959 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26665870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 26937556 - 26937467
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26937556 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26937467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 19472546 - 19472458
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||| || ||||| |  |||||||||||||    
T  19472546 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccagctttccaactaaggttgttctaggtt 19472458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 159
Target Start/End: Original strand, 26172743 - 26172811
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccc 159  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||    
T  26172743 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttccc 26172811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 148
Target Start/End: Complemental strand, 1858805 - 1858746
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaa 148  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  1858805 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaa 1858746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23451634 - 23451724
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23451634 tgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23451724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23463139 - 23463229
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23463139 tgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23463229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 123133 - 123076
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  123133 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 123076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 16674430 - 16674519
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||| |  ||||||| |||||    
T  16674430 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaactaaggttgttccaggtt 16674519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 20232828 - 20232917
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||| ||| |  ||||||| |||||    
T  20232828 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcctaactaaggttgttccaggtt 20232917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 98 - 219
Target Start/End: Original strand, 31342403 - 31342524
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 197  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||||||| ||   |||||  ||||| |  ||||||||| | ||| ||| | |||||||||    
T  31342403 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagttcagcccagatctccaactaaggttgttctaagctaagccaggttcaatctca 31342502  T
Q  198 ttctaagttatcatctaatctt 219  Q
    ||||| |||||||| |||||||    
T  31342503 ttctaggttatcatttaatctt 31342524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 17918979 - 17918907
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || |||||    
T  17918979 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaac 17918907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 20296127 - 20296215
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  20296127 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 20296215  T

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Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 23458878 - 23458968
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||| |||||| | | ||||| |||||||||||||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  23458878 tgcactcagttcttgaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 23458968  T

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Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 12028393 - 12028304
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  12028393 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 12028304  T

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Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Complemental strand, 17718259 - 17718182
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 175  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| |  |||||||||    
T  17718259 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgttcta 17718182  T

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Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 24222174 - 24222255
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  24222174 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 24222255  T

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Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 24532876 - 24532787
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||  ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  24532876 gcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 24532787  T

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Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Original strand, 18774490 - 18774554
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| |||||||    
T  18774490 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaac 18774554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 162
Target Start/End: Complemental strand, 26742574 - 26742502
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||| || |||||| ||||| |||||||| ||||| ||||||||||||||| |||||| |||||    
T  26742574 gcactcagttctgaaaatggtcgcgaggcgagagcatcagctcgccatggcgagtacaagccagatttccaac 26742502  T

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Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 42805698 - 42805762
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||| |||||||||| ||||    
T  42805698 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagccaga 42805762  T

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Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 25229233 - 25229170
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  25229233 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 25229170  T

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Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 25293389 - 25293326
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| ||||    
T  25293389 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccaga 25293326  T

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Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 21295091 - 21295002
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  21295091 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 21295002  T

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Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 25535266 - 25535355
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  25535266 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 25535355  T

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Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 26680868 - 26680957
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  26680868 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 26680957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 26952475 - 26952564
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  26952475 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 26952564  T

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Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 162
Target Start/End: Original strand, 18784336 - 18784397
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||| ||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| |||||||    
T  18784336 tggacgtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaac 18784397  T

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Target: chr2 (Bit Score: 111; Significance: 4e-56; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 23038257 - 23038467
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||| |||||||||  |   |||||||||||||| ||||||||||| ||  |||||     
T  23038257 taggtctcaatactacccaagggtccatctctaatcaaatcatgcgacacagatcgcaatttcctcacttgcactcagttctggaagtgctcacgaggcg 23038356  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||| |||| ||| | ||||||||||||||||||||||| |||||||    
T  23038357 agagcatctgctcgccatggcgggtacaagccagattcccaacaatggttgttctagcttaaaccaggttcaatctcattctaagttatcatttaatctt 23038456  T
Q  220 tattaaacatc 230  Q
    || ||| ||||    
T  23038457 taataagcatc 23038467  T

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Target: chr2; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 22799023 - 22798813
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| |||||||||  ||  || ||||||||| | ||||||||||| ||| |||||     
T  22799023 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggcg 22798924  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | || ||||||| | ||| ||| | |||||||| ||||||||||||||||||||||    
T  22798923 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagctgttctaagctaaaccaggttcaatctcgttctaagttatcatctaatctt 22798824  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  22798823 taataaacatc 22798813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 22740857 - 22740647
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  22740857 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 22740758  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| | |||||||| |||| ||||||||||||||  ||||||||| ||||| | | | |||||||| |||||||||||||| |||||||    
T  22740757 agagcatctgctcgccgtggcgagttcaagccagattcccaacaaaggttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctt 22740658  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  22740657 taatatacatc 22740647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 40622105 - 40621904
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||| ||||| |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  40622105 taggtctcattactacccaagggtccatctctaaacaaaatatgcgaaacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 40622006  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| | |||||||||| | ||  ||| | |||||||| |||||||||||||| |||||||    
T  40622005 agagcatctgctcgccatggcgagtacaagccagaattccaactaaagttgttctaagctataccaggttcaatctcgttctaagttatcatttaatctt 40621906  T
Q  220 ta 221  Q
    ||    
T  40621905 ta 40621904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 22758612 - 22758402
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||| ||||| ||  |||||     
T  22758612 taggtctcattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcg 22758513  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | | || ||  |||||||||||||| |||||||    
T  22758512 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaactaggttgaagcttgttctaagttatcatgtaatctt 22758413  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  22758412 taatatacatc 22758402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 23019603 - 23019393
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| ||||||| ||||||| |||  |||||| |||||||||  ||  || ||||||||||| ||||||||||| ||| |||||     
T  23019603 taggtcacattactacccaagggtccaactctaattaaattatgcgacacagatcgcaatatcctgacttgcactcagttctggaagtgctcgcgaggcg 23019504  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||||| |||| |||||| |||||||| |||||||||||| | ||||||||||   ||  ||| | ||||||||| ||||||| |||||||||||||    
T  23019503 agagcatctactcgccatggcaagtacaagccagattcccaactaaagttgttctaacctagaccaggttcaatctcactctaagtcatcatctaatctt 23019404  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  23019403 taataaacatc 23019393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 230
Target Start/End: Complemental strand, 23101092 - 23100917
Alignment:
Q  55 caaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||| ||||||| | ||||||| |||  |||||||||||||| || |||||||| ||| ||||| |||||||||||||| |||||||| ||||||  |||    
T  23101092 caaatcatgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagctaga 23100993  T
Q  155 ttcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||||||||| | ||||||||||||||| ||| | ||||||||||||||||||||||| |||| |||| ||| ||||    
T  23100992 ttcccaacagtggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatttttaataagcatc 23100917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 45678052 - 45677842
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| ||||||||  ||||||| ||||||| |   |  |||| ||||||||| ||||||||||| ||  |||||     
T  45678052 taggtcacattactacctaagagtccatccctaatcaactcatgcgacacagatcacaacattctcaattgcactcagttctggaagtgctcacgaggcg 45677953  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  45677952 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 45677853  T
Q  220 tattaaacatc 230  Q
    || ||| ||||    
T  45677852 taataatcatc 45677842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 25963614 - 25963404
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   ||| || |||||||||   | ||| ||||||| ||||||||||||||| ||| |||||     
T  25963614 taggtcacattactacctaagggtccaaccctaatcaacttatgagaaacagatcgcaacatactaacttgcattcaattctggaagtgctcgcgaggcg 25963515  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  25963514 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 25963415  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  25963414 taataaacatc 25963404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 37524886 - 37525096
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| |  |||||||   ||| || |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  37524886 taggtcacattactacctaagggtccaaccttaatcaacttatgtgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 37524985  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  37524986 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 37525085  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  37525086 taataaacatc 37525096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 24673864 - 24674008
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    ||||||| ||| || |||||||| ||| ||||| |||||||||||||| |||||||| |||||| |||||||||||| |  ||||||||| | ||| |||    
T  24673864 acttgcattcagttgtggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagccagattcccaactaatgttgttctaagctaaacca 24673963  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     | |||||||||||||| |||||||| ||||||| | ||||||||    
T  24673964 ggttcaatctcattctaggttatcatttaatcttcaataaacatc 24674008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 21918213 - 21918003
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| |  |||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  21918213 taggtcacattactacctaagggtccaaccataatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 21918114  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||| | | ||| ||| | |||||||  |||||||| |||||||||||||    
T  21918113 agagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttcaaagctaaaccaggttcaatctagttctaagtcatcatctaatctt 21918014  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  21918013 taataaacatc 21918003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 15477883 - 15477971
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |   ||||||||||||    
T  15477883 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaagattgttctaggtt 15477971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 159
Target Start/End: Complemental strand, 19928329 - 19928261
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattccc 159  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||    
T  19928329 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 19928261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 22461018 - 22460929
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  22461018 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 22460929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 19688585 - 19688495
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| || || |||||||||||| ||||||||||||||||| |||||| ||||| |  ||||||| |||||    
T  19688585 tgcactcagttctggaagtgctcgcgatgcgagagcatctgcttgtcatggcgagtacaagccagatttccaactaaggttgttccaggtt 19688495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 24735680 - 24735770
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||| ||| ||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  24735680 tgcaatcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaggttgttccaggtt 24735770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 12901339 - 12901251
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  12901339 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 12901251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 24649636 - 24649724
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  24649636 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 24649724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27379259 - 27379171
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27379259 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27379171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27383305 - 27383217
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27383305 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27383217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 27602076 - 27602134
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  27602076 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 27602134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 18855289 - 18855200
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||  ||||| ||||||| |||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  18855289 gcactcagttctggaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgttctaggtt 18855200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23187353 - 23187442
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  23187353 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 23187442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23598616 - 23598705
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  23598616 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 23598705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 24655158 - 24655077
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || ||||||| |||||    
T  24655158 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttccaggtt 24655077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 24870177 - 24870258
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||  ||||| |||||||||||||| ||||||||||||  | |||||| ||||| || |||||||||||||    
T  24870177 ttctggaagtgctcatgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgttctaggtt 24870258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 22811713 - 22811621
Alignment:
Q  138 ggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    |||||||||||| |||| ||||||| |  ||||||||| | ||| ||| | |||||||| |||||| | ||||||||||||||| ||||||||    
T  22811713 ggcgagtacaagccagaatcccaactaaggttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatc 22811621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 24628305 - 24628217
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||| ||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  24628305 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 24628217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 26125484 - 26125540
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| | | ||||| |||||||||||||| |||||||||||||||    
T  26125484 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaag 26125540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 41530836 - 41530780
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||    
T  41530836 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtaca 41530780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 41667230 - 41667286
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| | | ||||| |||||||||||||| |||||||||||||||    
T  41667230 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaag 41667286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 24175097 - 24175178
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  24175097 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 24175178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 61094 - 61182
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| |||||  ||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  61094 cactcagttctggaagtgctcgcgaggcgggagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 61182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 163
Target Start/End: Complemental strand, 24716345 - 24716285
Alignment:
Q  103 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaaca 163  Q
    |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||    
T  24716345 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaaca 24716285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 25961354 - 25961306
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  25961354 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 25961306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 21327393 - 21327330
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| |||||| |||| ||| ||||| || ||||||||||| ||||||||||||||| ||||    
T  21327393 cactcagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccaga 21327330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 44370133 - 44370062
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||| ||||||||| |||| |||||| | | ||||| |||||||||||||| |||||| |||||||| ||||    
T  44370133 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccaga 44370062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 23103293 - 23103255
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaa 58  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  23103293 taggtctcattactaccaaagggtccatctctaatcaaa 23103255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 154
Target Start/End: Complemental strand, 21318455 - 21318399
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||| |||| ||| ||||| || ||||||||||| ||||||||||||||| ||||    
T  21318455 ttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccaga 21318399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 230
Target Start/End: Original strand, 24658032 - 24658072
Alignment:
Q  190 caatctcattctaagttatcatctaatctttattaaacatc 230  Q
    |||||||||||||||||||||| ||||| ||| ||||||||    
T  24658032 caatctcattctaagttatcatttaatcattaataaacatc 24658072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 40428762 - 40428810
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||| |||||    
T  40428762 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtac 40428810  T

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Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 15877725 - 15877524
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  15877725 taggtctcattactacccaagggtccatctctaatcaaattatgcgacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 15877626  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| ||| | |||||||| | |||||||||||| |||||||    
T  15877625 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcgtcctaagttatcatttaatctt 15877526  T
Q  220 ta 221  Q
    ||    
T  15877525 ta 15877524  T

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Target: chr3; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 30 - 221
Target Start/End: Original strand, 23408664 - 23408855
Alignment:
Q  30 tactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctg 129  Q
    ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||| | ||||||||||| ||| ||||| ||||||||||    
T  23408664 tactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggcgagagcatctg 23408763  T
Q  130 ctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||| |||||||||||||||  |||||||||||||| ||||||||||||||| ||| | ||||||||||||||||||||||| |||||||||    
T  23408764 ctcgccatggcgagtacaagcaagattcccaacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatcttta 23408855  T

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Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 16369692 - 16369839
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| | |||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | |||     
T  16369692 ctcacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 16369791  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | ||||||| ||||||||||||||| ||||||||| ||||||||    
T  16369792 ccaggttcaatcttattctaagttatcatttaatctttaataaacatc 16369839  T

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Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 15060513 - 15060723
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| || ||||||| | ||||||||| ||||||||  ||||||| |||||||||   |  || ||||||| ||| | ||||||||| ||| |||||     
T  15060513 taggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcgcaacatcctaacttgcaatcagtcctggaagtgctcgcgaggcg 15060612  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  15060613 agagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 15060712  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  15060713 taataaacatc 15060723  T

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Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 230
Target Start/End: Original strand, 12173073 - 12173217
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    ||||||| ||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| | |||||||||| | ||| |||    
T  12173073 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaataccaactaaagttgttctaagctaaacca 12173172  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     | ||||||||||||||||| ||||||||||||||| ||||||||    
T  12173173 ggttcaatctcattctaagtcatcatctaatctttaataaacatc 12173217  T

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Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 856357 - 856567
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  856357 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 856456  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||  ||||||||||| |||| | ||||| | | |||||||| | |||  || | ||||||||||||||||||||||| |||||||    
T  856457 agagcatctgctcgccaaagcgagtacaagccagaataccaactaaaattgttctaagctaaaacaggttcaatctcattctaagttatcatttaatctt 856556  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  856557 taataaacatc 856567  T

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Target: chr3; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 12496476 - 12496686
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  12496476 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 12496575  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  12496576 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 12496675  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  12496676 taataaacatc 12496686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 18383814 - 18383604
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| |||| |||||| ||| |||||     
T  18383814 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatactaacttgcattcagttcttgaagtgctcgcgaggcg 18383715  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||| | ||||||||||||||| | |||||||||||||    
T  18383714 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaggttcaatctcattctaaatcatcatctaatctt 18383615  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  18383614 taataaacatc 18383604  T

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Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 230
Target Start/End: Complemental strand, 14878396 - 14878192
Alignment:
Q  27 cattactacccagggg-tccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagca 125  Q
    |||||||||| ||||| ||||||||||||||||  |||||| |||||||||  ||  |||| | ||||||  ||||||||||| ||  ||||| ||| ||    
T  14878396 cattactacctagggggtccatctctaatcaaattatgcgacacagatcgcaatatcctcaatcgcactcggttctggaagtgctctcgaggcgagaaca 14878297  T
Q  126 tctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaa 225  Q
    |||||||| |||||||||||| || |||| | ||||| | |||| ||||| | ||| ||| | ||||||||| ||||||| ||||||||||||||| |||    
T  14878296 tctgctcgccatggcgagtacgagccagaattccaactaaagttattctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataa 14878197  T
Q  226 acatc 230  Q
    |||||    
T  14878196 acatc 14878192  T

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Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 22 - 230
Target Start/End: Complemental strand, 19725807 - 19725599
Alignment:
Q  22 ggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaag 121  Q
    |||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   |  || ||||| | ||| ||||||||||| ||| ||||| ||    
T  19725807 ggtcacattactacctaagggtccaaccctaatcaatttatgcgaaacagatcgcaacatcctaacttgtattcagttctggaagtgctcgcgaggcgag 19725708  T
Q  122 agcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||||||||| |||||||||||||||||||| ||||||| |  ||||||||| | ||| ||| | |||||||| |||||  | |||||||||||||||    
T  19725707 agcatctgctcgccatggcgagtacaagtcagaatcccaactaaggttgttctaagctaaaccaggttcaatctcgttctagatcatcatctaatcttta 19725608  T
Q  222 ttaaacatc 230  Q
    || ||||||    
T  19725607 ttcaacatc 19725599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 175
Target Start/End: Complemental strand, 23052967 - 23052819
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||||||||||||||||||||||||   |||||| |||| |||    |  |||||||||| ||||||||| ||||| ||| ||||| |||||||    
T  23052967 cattactacccaggggtccatctctaatcaagttatgcgacacaggtcgtaacatcctcacttgcattcaattctgcaagtgctcgcgaggcgagagcat 23052868  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 175  Q
    ||||||| ||||||||||||||| |||||||||||| |  |||||||||    
T  23052867 ctgctcgccatggcgagtacaagccagattcccaactaaggttgttcta 23052819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 11298426 - 11298216
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | |||||||||  ||| || |||||||||   | ||| | ||||| ||||||||||||||| ||| |||||     
T  11298426 taggtcacattactacctaagggtccaaccctaatcaaattatgagaaacagatcgcaacatactaaattgcattcaattctggaagtgctcgcgaggcg 11298327  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||| ||| ||||||||||||||| |||||| |||||   |||||||||| | ||| ||| | |||||||  |||||| | | |||||||||||    
T  11298326 agagcatctgatcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaaccaggttcaatcttgttctaaatcagcatctaatctt 11298227  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  11298226 taataaacatc 11298216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 15051737 - 15051947
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| || ||||||| | ||||||||| ||||||||  ||||||| ||||||| |   |  || ||||||| ||| | || |||||| ||| |||||     
T  15051737 taggtcacaatactacctaagggtccatccctaatcaattcatgcgacacagatcacaacatcctaacttgcattcagtcctagaagtgctcgcgaggcg 15051836  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | || || |  ||||||||| | ||||||| | |||||||||||||||||||| || |||||||    
T  15051837 agagcatctgctcgccatggcgagtacaagccagaattccgactaaggttgttctaagctaatccaggttcaatctcattctaagttataatttaatctt 15051936  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  15051937 taataaacatc 15051947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 23077375 - 23077165
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | |||||||||||||||||||  |||||| |||||||||   |  |||| ||| | ||  ||||||||||| ||| |||||     
T  23077375 taggtctcattactacctaagggtccatctctaatcaaattatgcgacacagatcgcaaaatcctcaattgaaatcggttctggaagtgctcgcgaggcg 23077276  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||||||  ||| | |||||   |||||||||| | ||| | | | ||||||||| |||  || |||||||||||||    
T  23077275 agagcatctgctcgccatggcgagtacaagctagaattccaacctaagttgttctaagctaaactaggttcaatctcactctgtgtcatcatctaatctt 23077176  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  23077175 taataaacatc 23077165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 322810 - 323020
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| | |||||||   | ||| ||||||| | | ||||||||||| ||| |||||     
T  322810 taggtcacattactacctaagggtccaaccctaatcaatttatgcgaaatagatcgcaacatactaacttgcatttagttctggaagtgctcgcgaggcg 322909  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||| ||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  322910 agagcatctgctcgccatggtgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 323009  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  323010 taataaacatc 323020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 7793175 - 7793085
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  7793175 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 7793085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 26190843 - 26190696
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||   ||||||| || | |||     
T  26190843 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactcaagttgttataagctaaa 26190744  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | |||||||  |||||||| | ||||| ||||||| ||||||||    
T  26190743 ccaggttcaatcttgttctaagtcagcatcttatctttaataaacatc 26190696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 221
Target Start/End: Complemental strand, 12037787 - 12037649
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| | | | |     
T  12037787 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcggctcgccatggcgagtacaagccagaattccaactaatgttgttcaaagcttaa 12037688  T
Q  183 ccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    ||| | |||||||||||||||||  ||||||||||||||    
T  12037687 ccaggttcaatctcattctaagtcttcatctaatcttta 12037649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 15849914 - 15849824
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  15849914 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaccaaggttgttccaggtt 15849824  T

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Target: chr3; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 16797883 - 16797793
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  16797883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttcgaggtt 16797793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 326992 - 326903
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  326992 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 326903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 1598308 - 1598219
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  1598308 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 1598219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 3833952 - 3834041
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  3833952 gcactcaaatctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaaccaaggttgttctaggtt 3834041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 11300339 - 11300250
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  11300339 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 11300250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 17525049 - 17524948
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| || |||||||| ||| ||||||    
T  17525049 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttttggaagtgctcgcgaggca 17524950  T
Q  120 ag 121  Q
    ||    
T  17524949 ag 17524948  T

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Target: chr3; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 2897652 - 2897562
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | ||||||||||| ||| ||||| ||||||||||||||||||| |||||||||| |||||||||||| |  ||||||| |||||    
T  2897652 tgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgtcatgtcgagtacaagccagattcccaactaaggttgttccaggtt 2897562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 15482939 - 15483029
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||| ||| |  ||||||| |||||    
T  15482939 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccaaactaaggttgttccaggtt 15483029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 16808710 - 16808620
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  16808710 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttcgaggtt 16808620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 20 - 154
Target Start/End: Original strand, 16909971 - 16910105
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| ||||||||  || || | |||||||  |  |  |||||||||||||| |||| |||||| ||| |||||     
T  16909971 taggtcacattactacctaagggtccatccctaatcaattcaagcaacacagatcatgacattctcacttgcactcagttctagaagtgctcgcgaggcg 16910070  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcaga 154  Q
    |||||||||||||| ||||||||||||||| ||||    
T  16910071 agagcatctgctcgccatggcgagtacaagccaga 16910105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 20461329 - 20461239
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||| ||| |  ||||||| |||||    
T  20461329 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcctaactaaggttgttccaggtt 20461239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 15941732 - 15941643
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  15941732 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactacggttgttctaggtt 15941643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 17242250 - 17242339
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  17242250 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 17242339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 38814662 - 38814751
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  38814662 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 38814751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 1982636 - 1982549
Alignment:
Q  92 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  1982636 actcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 1982549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 179
Target Start/End: Original strand, 20723242 - 20723368
Alignment:
Q  53 atcaaaacatgcgatacagatcgcgttaa-actcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtc 151  Q
    |||||||||||||| |||||||||   || ||||| | |||||| | |||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| |    
T  20723242 atcaaaacatgcgacacagatcgcacaaacactcaat-gcactccaatctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagcc 20723340  T
Q  152 agattcccaacaatagttgttctaggtt 179  Q
    || |||||||| |  |||||||||||||    
T  20723341 agcttcccaactaatgttgttctaggtt 20723368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 15617656 - 15617714
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| |||||||||||||||||||| | |||||||||||||    
T  15617656 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaag 15617714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 31097383 - 31097310
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| |||||   |||||||||||| ||||||||||||||| ||||||||||||    
T  31097383 tgcactcagttctggaagtgctcgcgaggcggtagcatctgctcgccatggcgagtacaagccagattcccaac 31097310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 7109981 - 7110069
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  7109981 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 7110069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 7113916 - 7114004
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  7113916 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 7114004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 11863078 - 11863217
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    |||||||||||||| |||||||  |   ||||| |||||||||||||| |||||||||| |||| |||| | ||||| | ||| |||||| | ||| |||    
T  11863078 acttgcactcaattttggaagtacttacgaggcgagagcatctgctcgccatggcgagttcaagccagaattccaactaaagtagttctaagctaa-cca 11863176  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaa 226  Q
     | |||||||| |||||| | ||||||||||||||| ||||    
T  11863177 ggttcaatctcgttctaaatcatcatctaatctttaataaa 11863217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16697071 - 16697159
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  16697071 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagctttccaactaaggttgttccaggtt 16697159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 22337002 - 22337090
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22337002 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22337090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 27409470 - 27409382
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  27409470 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 27409382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 11594967 - 11594878
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  11594967 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 11594878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 42326222 - 42326311
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  42326222 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 42326311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 11851860 - 11851999
Alignment:
Q  86 acttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatcca 185  Q
    ||||||||| | ||||||||||| |   ||||| |||||||||| ||| |||||||||| |||| |||| | ||||| | ||||||| || | ||| |||    
T  11851860 acttgcacttagttctggaagtgcttacgaggcgagagcatctgatcgccatggcgagttcaagccagaattccaactaaagttgttataagctaa-cca 11851958  T
Q  186 agctcaatctcattctaagttatcatctaatctttattaaa 226  Q
     | |||||||| |||||| | ||||||||||||||| ||||    
T  11851959 ggttcaatctcgttctaaatcatcatctaatctttaataaa 11851999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 11855015 - 11855103
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| |||||||  || ||| ||||  |||||||||||||| ||||||||||||||| ||| |||||||| || ||||||| |||||    
T  11855015 cactcagttctggatttgctcgcgaggtgagagcatctgctcgccatggcgagtacaagccagcttcccaactatggttgttccaggtt 11855103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 16690498 - 16690586
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||| ||| ||| || ||||| |  ||||||| |||||    
T  16690498 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaaaagccagctttccaactaaggttgttccaggtt 16690586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 22321947 - 22322035
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  22321947 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 22322035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 321779 - 321701
Alignment:
Q  152 agattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||| ||||| ||||||||    
T  321779 agattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaacctttaataaacatc 321701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 3402775 - 3402694
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  3402775 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactacggttgttccaggtt 3402694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 24188055 - 24188144
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  24188055 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 24188144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 55149256 - 55149345
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||  ||  |||||||| |  |||||||||||||    
T  55149256 gcactcaaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaatccaacttcccaactaatgttgttctaggtt 55149345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 28950007 - 28950065
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||  | ||| |||||||||||||| | |||||||||||||    
T  28950007 cactcaattctggaagtgctcacggggcgagagcatctgctcgccgtggcgagtacaag 28950065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 839533 - 839613
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| |||||||||| |||||||  | |||||| |  |||||||||||||    
T  839533 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagtcaactccccaactaatgttgttctaggtt 839613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 11557204 - 11557156
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||    
T  11557204 ttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtac 11557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 36680 - 36890
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||| ||||||| |||| ||||||| ||||||||  ||   |||||||||||||| |||| |||||| ||| |||||     
T  36680 taggtctcattactacccaagggtccttctctaaacaaatcatgcgacacagatcgtattttcctcacttgcactcagttctagaagtgctcgcgaggcg 36779  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||| ||||| ||| | ||||||||||||||||||||||| |||||||    
T  36780 agagcatctgctcgccatggcgagtacaagccagattcccaacaaaggttgttctaagttaaaccaggttcaatctcattctaagttatcatataatctt 36879  T
Q  220 tattaaacatc 230  Q
    || ||| ||||    
T  36880 taataagcatc 36890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 8854 - 8653
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||| ||  |||||| |||| ||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  8854 taggtctcattactacccaagggtccatctctaatcgaattatgcgacacaggtcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 8755  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||||||| | | | |||||||| |||||||||||||| |||||||    
T  8754 agagcatctgctcgccatggcgagtacaagccagattcccaacaaatgttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctt 8655  T
Q  220 ta 221  Q
    ||    
T  8654 ta 8653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 103; Significance: 2e-51; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 226
Target Start/End: Complemental strand, 65690 - 65484
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  |||||| | |||||||  ||  |||||||||||||| ||||||||||| ||  |||||     
T  65690 taggtctcattactacccaagggtccatctctaatcaaattatgcgacaaagatcgcaatatcctcacttgcactcagttctggaagtgctcacgaggcg 65591  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||  ||||||||||||||| ||| | |||||||  |||||||||||||| |||||||    
T  65590 agagcatctgctcgccatggcgagtacaagccagatccccaacaaaggttgttctaggttaaaccaggttcaatcttgttctaagttatcatttaatctt 65491  T
Q  220 tattaaa 226  Q
    || ||||    
T  65490 taataaa 65484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 53842 - 53932
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  53842 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 53932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 218
Target Start/End: Original strand, 174989 - 175187
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||||| ||   |||||||| ||||  ||||||||||| ||| ||||      
T  174989 taggtctcattactaccaaagggtccatctctaatcaaatcatgcgacacagatcgcattttcctcacttggactcggttctggaagtgctcgcgaggtg 175088  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatct 218  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||  ||||||||||||||| ||| | ||||||||||||||||||||||| ||||||    
T  175089 agagcatctgctcgcaatggcgagtacaagccagattcccaacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatct 175187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 1562 - 1772
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||| ||||||||| |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  1562 taggtctcaatactacccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 1661  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||| |||||||||| |||| |||||||||  ||||||||||||| | ||| | ||||| || |||||||||||| | |||||||    
T  1662 agagcatctgctcgccatgacgagtacaagccagactcccaacaaaggttgttctaggtttaaccaggttcaatgtctttctaagttatcctttaatctt 1761  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  1762 taataaacatc 1772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 2e-48; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 20 - 221
Target Start/End: Original strand, 13569734 - 13569935
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||| |||||| |||||||||||||||||||  |||||| || ||||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  13569734 taggtcacattaatacccaagggtccatctctaatcaaattatgcgacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 13569833  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  13569834 agagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 13569933  T
Q  220 ta 221  Q
    ||    
T  13569934 ta 13569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 15093995 - 15094205
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||| ||| |||||||||||||||||||  |||||| |||||||||  ||  || ||||||||||| || |||||||| ||| |||||     
T  15093995 taggtcacattactaaccaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcgaggcg 15094094  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||| ||||| ||||||||||||||| |||||||||||| | |||||||||| | ||  ||| | |||||||||||| ||||||||||||||||||    
T  15094095 agagcatcagctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctataccaggttcaatctcattccaagttatcatctaatctt 15094194  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  15094195 taataaacatc 15094205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 44675854 - 44676064
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| |||||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| ||||      
T  44675854 taggtcacattactacctaggggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggtg 44675953  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||| |||||| || |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| ||||| |    
T  44675954 agagcatctgctcgccatggggagtactagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcat 44676053  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  44676054 taataaacatc 44676064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 12570243 - 12570449
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||| |||   |||||| |||| ||||      |||||||||||||| ||||||||||| ||| |||||     
T  12570243 taggtcacattactacccaagggtccatctctaaacaagttatgcgacacaggtcgcaaagttctcacttgcactcagttctggaagtgctcgcgaggcg 12570342  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  12570343 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 12570442  T
Q  220 tattaaa 226  Q
    || ||||    
T  12570443 taataaa 12570449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 15121637 - 15121490
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||||||  ||||||||||||||| |||||||||||| | |||||||||| | |||     
T  15121637 ctcacttgcactcaattctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 15121538  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | ||||||||| ||||||| ||||||||||||||| ||||||||    
T  15121537 ccaggttcaatctcactctaagtcatcatctaatctttaataaacatc 15121490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 15125042 - 15124850
Alignment:
Q  29 ttactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatct 128  Q
    |||||||||||||||||| |||||| ||||  |||||| ||| ||||   ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  15125042 ttactacccaggggtccaactctaaacaaattatgcgacacatatcgaaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatct 15124943  T
Q  129 gctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    ||| | ||||||||||||||| |||||||||||| |  ||||||||| | ||| ||| | |||||||| |||||||||||||| |||||||||    
T  15124942 gcttgccatggcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcgttctaagttatcatttaatcttta 15124850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 23843700 - 23843911
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||| ||||| |||||||||||||||||||  |||||| |||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  23843700 taggtcacattaccacccaagggtccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 23843799  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctc-aatctcattctaagttatcatctaatct 218  Q
    |||||||||||||| ||||||||||||||| ||||||  |||| |  ||||||||| | ||| ||| | || |||||||||| |||||||||| |||||     
T  23843800 agagcatctgctcgccatggcgagtacaagccagattttcaactaatgttgttctaagctaaaccaggttcaaatctcattccaagttatcatttaatca 23843899  T
Q  219 ttattaaacatc 230  Q
    ||| | ||||||    
T  23843900 ttaatgaacatc 23843911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 16356850 - 16356640
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  16356850 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 16356751  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | ||| |   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  16356750 agagcatctgctcgccatggcgagtacaagccagaattccagcttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 16356651  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  16356650 taataaacatc 16356640  T

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Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 230
Target Start/End: Complemental strand, 16487968 - 16487765
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||| | ||||||||| | ||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| ||||| |||||||    
T  16487968 cattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcat 16487869  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||||||| ||||||||||||||| |||| | ||||| | ||| |||||| | |||  || | |||||||| |||||| | ||||||||||||||| ||||    
T  16487868 ctgctcgccatggcgagtacaagccagaattccaactaaagtggttctaagctaaaacaggttcaatctcgttctaaatcatcatctaatctttaataaa 16487769  T
Q  227 catc 230  Q
    ||||    
T  16487768 catc 16487765  T

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Target: chr4; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 9556809 - 9556897
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  9556809 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 9556897  T

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Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 16243227 - 16243139
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||| ||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  16243227 cactgaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 16243139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 36133791 - 36133701
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  36133791 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 36133701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 18222205 - 18222117
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  18222205 cactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 18222117  T

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Target: chr4; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 16678415 - 16678328
Alignment:
Q  92 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | |||||||| |||||    
T  16678415 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttcaaggtt 16678328  T

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Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 1951590 - 1951517
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| || || |||||||||||||| ||||||||||||||| ||||||||||||    
T  1951590 tgcactcagttctggaagtgctcgcgaagcgagagcatctgctcgccatggcgagtacaagccagattcccaac 1951517  T

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Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 15353134 - 15353045
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| || ||||||| |||||    
T  15353134 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactatggttgttccaggtt 15353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 45938433 - 45938514
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  |||||||||||||    
T  45938433 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttctaggtt 45938514  T

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Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 2015057 - 2015145
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| ||||| |||||||  ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  2015057 cactcaattctggaagtgctcgcgaggcgagagcgtctgctcaccatggcgagtacaagccagattcccaactaaggttgttccaggtt 2015145  T

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Target: chr4; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 19757427 - 19757340
Alignment:
Q  92 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  19757427 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 19757340  T

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Target: chr4; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 92 - 179
Target Start/End: Original strand, 19782379 - 19782466
Alignment:
Q  92 actcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  19782379 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 19782466  T

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Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 17152315 - 17152226
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||| |||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  17152315 gcactcagttctggaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 17152226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23139548 - 23139637
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  23139548 gcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 23139637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 26243493 - 26243404
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| | | ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  26243493 gcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 26243404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 28569271 - 28569183
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||  || || |||||||||||||| ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  28569271 cactcaattctggaagtgctcacgaagcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgttccaggtt 28569183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 33742657 - 33742745
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  33742657 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 33742745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 27534303 - 27534362
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||||||    
T  27534303 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 27534362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 4561160 - 4561102
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  4561160 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 4561102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 5756764 - 5756706
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  5756764 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 5756706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 11250389 - 11250300
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  11250389 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 11250300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 18237170 - 18237259
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  ||||||| |||||    
T  18237170 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttccaggtt 18237259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 149
Target Start/End: Complemental strand, 43255990 - 43255930
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||  ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  43255990 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 43255930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 3413082 - 3413159
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 175  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | ||||| |  |||||||||    
T  3413082 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttcta 3413159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23838711 - 23838800
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  23838711 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 23838800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 98 - 179
Target Start/End: Original strand, 25555802 - 25555883
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||  | |||||| ||||| ||  |||||| |||||    
T  25555802 ttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatgattgttccaggtt 25555883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 42997275 - 42997222
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    |||||||||||||||| ||| ||||| |||||||||| ||| ||||||||||||    
T  42997275 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtac 42997222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 14708459 - 14708403
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||| |||| || ||| ||||| |||||||||||||| |||||||||||||||    
T  14708459 ctcaattcaggaaatgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 14708403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 16351668 - 16351620
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  16351668 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 16351620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 41385574 - 41385484
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| |||||||||||||||  |  |||||||| |  |||||||||||||    
T  41385574 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcgaacttcccaactaatgttgttctaggtt 41385484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 9530711 - 9530800
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||  ||||||||  |||| ||||||||||| ||| |||| | ||||| |  |||||||||||||    
T  9530711 gcactcagttctggaagtgctcgcgaggtgagagcatcatctcgccatggcgagtataagccagaattccaactaaggttgttctaggtt 9530800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 14679240 - 14679329
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  ||||| || |  |||||||||||||    
T  14679240 gcactctaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttccctactaatgttgttctaggtt 14679329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 14685458 - 14685538
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||  |  |||||||||||||    
T  14685458 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaaataatgttgttctaggtt 14685538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 149
Target Start/End: Complemental strand, 18602562 - 18602514
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||| ||| ||||| |||||||| ||||| |||||||||||||||    
T  18602562 tggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaag 18602514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 20 - 228
Target Start/End: Original strand, 6325 - 6533
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||| || ||||||||||||| ||||||||||||||||  |||||| |||||||||   |  ||||||||||| || ||||||||||| ||| ||||      
T  6325 taggtttctttactacccagggatccatctctaatcaaattatgcgacacagatcgcaacatcctcacttgcacacagttctggaagtgctcgcgaggag 6424  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  6425 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 6524  T
Q  220 tattaaaca 228  Q
    || ||||||    
T  6525 taataaaca 6533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 15643 - 15824
Alignment:
Q  40 gggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatgg 139  Q
    |||||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||    
T  15643 gggtccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgg 15742  T
Q  140 cgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||||||| |||||||||||| |  ||||||||| | ||| ||| | ||||||||||||||||||||||| |||||||||    
T  15743 cgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcttta 15824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 91; Significance: 3e-44; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 14894 - 15103
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||| ||||||||||||||| |||||||||||||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  14894 taggtttcattactacccaggagtccatctctaatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 14993  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||| | | |||||||||| | ||| ||| | ||||||||  ||||||||||||||| |||||    
T  14994 agagcatctgctcgccatggcgagtacaagccagattcccatctaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatcttatctt 15092  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  15093 taataaacatc 15103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 23909 - 24118
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||| ||||||||||||||| |||||||||| ||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  23909 taggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 24008  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||  |||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||  |||||||||||||||||||||    
T  24009 agagcatctgctcgccatggaaagtacaagccagactcccaactaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatctaatctt 24107  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  24108 taataaacatc 24118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 39333 - 39542
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||| ||||||||||||||| |||||||||| ||||||  |||||| |||||| ||  ||  |||||| ||||||| ||||||||||| ||| |||||     
T  39333 taggtttcattactacccaggtgtccatctcttatcaaattatgcgacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcg 39432  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||  |||||||| |||| ||||||| | |||||||||| | ||| ||| | ||||||||  |||||||||||||||||||||    
T  39433 agagcatctgctcgccatggaaagtacaagccagactcccaactaaagttgttctaagctaaaccaggttcaatctc-gtctaagttatcatctaatctt 39531  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  39532 taataaacatc 39542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 91; Significance: 3e-44; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 18462 - 18672
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  |||||| ||| |||||  ||  |||||||||||||| ||||||||| | ||| |||||     
T  18462 taggtcacattactacccaagggtccatctctaatcaaattatgcgacacatatcgcaatatcctcacttgcactcagttctggaagcgctcgtgaggcg 18561  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| |||||| ||||||||||||||| |||||||| ||| |  | ||||||| | ||| ||| | ||||||||||||||||||||||| |||||||    
T  18562 agagcatttgctcgccatggcgagtacaagccagattccaaactaatgatgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctt 18661  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  18662 taataaacatc 18672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 76998 - 76910
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||| | ||||||||||||||| ||| |||||||| |  ||||||| |||||    
T  76998 cactcaattctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtacaagccagcttcccaacgaaggttgttccaggtt 76910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 32665 - 32857
Alignment:
Q  29 ttactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatct 128  Q
    |||||||||||||||||| |||||| ||||  |||||| |||||||||| ||  |||||||||||||| ||||||||||| ||| ||||| |||||||||    
T  32665 ttactacccaggggtccaactctaaacaaattatgcgacacagatcgcgatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatct 32764  T
Q  129 gctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    ||||  |||| |||||||||| |||||||||||| |  ||||||||| | ||| ||| | |||||||| |||||||||||||| |||||||||    
T  32765 gctcaacatgtcgagtacaagccagattcccaactaatgttgttctaagctaaaccaggttcaatctcgttctaagttatcatttaatcttta 32857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 8778 - 8836
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  8778 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 8836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 223
Target Start/End: Complemental strand, 6975 - 6772
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||| ||||| ||||||||  ||||||| |||||||||   |  |||| ||||||||| ||||||||||| ||| |||||     
T  6975 taggtcacattactacctaagggcccatccctaatcaactcatgcgacacagatcgcaacattctcaattgcactcagttctggaagtgctcgcgaggcg 6876  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  6875 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 6776  T
Q  220 tatt 223  Q
    ||||    
T  6775 tatt 6772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 20 - 211
Target Start/End: Complemental strand, 18350 - 18159
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| ||||||||||||||||||||||||||||||||  |||||| ||| |||||  ||  |||||||||||||| ||||||||||| ||| |||||     
T  18350 taggtcacattactacccaggggtccatctctaatcaaattatgcgacacaaatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcg 18251  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcat 211  Q
    |||||||||||||| |||||||||||| || |||||||||||| |  ||| ||||| | ||| ||| | ||||| |||||||||||||||||    
T  18250 agagcatctgctcgccatggcgagtactagccagattcccaactaatgttattctaagctaaaccaggttcaatttcattctaagttatcat 18159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 3964 - 4173
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||||||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  3964 taggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 4062  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| | |||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||| |||||| ||||| |    
T  4063 agagcatttactcgccatggcgagtacaagctagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcat 4162  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  4163 taataaacatc 4173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 8395 - 8604
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||||||||  ||||||||||||||||   |  |||||||||||||| ||||||||||| ||| |||||     
T  8395 taggtcacattactacccaagggtccatctctaatcaaat-atgcgatacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcg 8493  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| | |||| |||||||||||||||  ||||||||||| |  ||||||||| | ||| ||| | |||||||||||||||| |||||| ||||| |    
T  8494 agagcatttactcgccatggcgagtacaagctagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcat 8593  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  8594 taataaacatc 8604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 28 - 230
Target Start/End: Complemental strand, 16238 - 16036
Alignment:
Q  28 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcatc 127  Q
    ||||||||||| ||||||| |||||||||||  |||||| |||||||||   || |||||||||||||||||||||||||| ||| ||||| || |||||    
T  16238 attactacccaagggtccacctctaatcaaattatgcgacacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggcgagggcatc 16139  T
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| ||||||||||||||| ||||||||| || |  ||||||||| | ||| ||  | |||||||||||||||  |||||| ||||||||| |||||    
T  16138 tgctcgccatggcgagtacaagccagattccctaccaatgttgttctaagctaaacctggttcaatctcattctaaactatcatttaatctttaataaac 16039  T
Q  228 atc 230  Q
    |||    
T  16038 atc 16036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 18490 - 18343
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | |||     
T  18490 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 18391  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | ||||||||||||||||||||||| ||||||||| ||||||||    
T  18390 ccaggttcaatctcattctaagttatcatttaatctttaataaacatc 18343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 82; Significance: 7e-39; HSPs: 4)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 34807 - 34606
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| |||||||||||||| |||   ||| || | || ||||  |   |||||||||||||| ||||||||||| ||| |||||     
T  34807 taggtcacattactacccaagggtccatctctaaacaagttatgtgacaaaggtcgcaatgttctcacttgcactcagttctggaagtgctcgcgaggcg 34708  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  34707 agagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 34608  T
Q  220 ta 221  Q
    ||    
T  34607 ta 34606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 41387 - 41244
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||  ||||| ||  ||||  | |||||||||||| ||||||||||||||| |||||||||||| | |||||||||| | |||     
T  41387 ctcacttgcactcagttctaaaagtgctcacgaggtgaaagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 41288  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    | | | ||||||||| ||||||| ||||||||||||||| ||||    
T  41287 ctaggttcaatctcactctaagtcatcatctaatctttaataaa 41244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 64131 - 64203
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |||||||    
T  64131 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 64203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 76015 - 76074
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  76015 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 76074  T

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Target: scaffold0297 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 15566 - 15407
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||||| |||||||||||||||||||  | |||| ||||||| |  ||  |||||||||||| | |||| |||||| ||| |||||     
T  15566 taggtctcattactacccaagggtccatctctaatcaaattaagcgacacagatcacaatatcctcacttgcactaagttctagaagtgatcgcgaggcg 15467  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||||||    
T  15466 agagcatctgcttgccatggcgagtacaagccagattcccaacaaaagttgttctaggtt 15407  T

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Target: scaffold0198 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 103 - 230
Target Start/End: Original strand, 26706 - 26833
Alignment:
Q  103 gaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattcta 202  Q
    |||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||| ||| | ||||||||||||||    
T  26706 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattcta 26805  T
Q  203 agttatcatctaatctttattaaacatc 230  Q
    ||||||||| ||||||||| ||| ||||    
T  26806 agttatcatttaatctttaataagcatc 26833  T

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Target: scaffold0215 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 23 - 221
Target Start/End: Original strand, 27048 - 27246
Alignment:
Q  23 gtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaaga 122  Q
    |||||||||||||||| |||||||||||||| ||||| || ||| |||||||||  ||  |||||||||||||| |||||||| || | | |||||||||    
T  27048 gtctcattactacccaagggtccatctctaaacaaaatattcgaaacagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggcaaga 27147  T
Q  123 gcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    ||||||||||| |||||||| |||||| |||| | ||||| | |||||||||| | ||  ||| | | |||||| |||||||||||||| |||||||||    
T  27148 gcatctgctcgccatggcgaatacaagccagaattccaactaaagttgttctaagctataccaggttaaatctcgttctaagttatcatttaatcttta 27246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 79; Significance: 4e-37; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 23564 - 23354
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||||| ||||||| |  ||||||||  |||||| | |||||||      |||||||||||||| |||| |||||| ||| |||||     
T  23564 taggtcacattactacccaagggtccaacattaatcaaattatgcgacaaagatcgcaaagttctcacttgcactcagttctagaagtgctcgcgaggcg 23465  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||| | ||| ||| | ||||||||| ||||||| |||||||||||||    
T  23464 agagcatctgctcgccatggcgagaacaagccagattcccaactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctt 23365  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  23364 taataaacatc 23354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 230
Target Start/End: Complemental strand, 38289 - 38187
Alignment:
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctttattaaac 227  Q
    |||||| ||||||||||||||| |||||||||||| | |||||||||| | ||| | | | ||||||||| ||||||| ||||| ||||||||| |||||    
T  38289 tgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaactatgttcaatctcactctaagtcatcatgtaatctttaataaac 38190  T
Q  228 atc 230  Q
    |||    
T  38189 atc 38187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 38376 - 38320
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgc 76  Q
    |||||| |||||||||||| ||||||| |||||||||||  |||||| |||||||||    
T  38376 taggtcacattactacccaagggtccaactctaatcaaattatgcgacacagatcgc 38320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 74; Significance: 4e-34; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 21703 - 21502
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| |||| |||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  21703 taggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 21604  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| |||   |||||||| |||||||||||||| |||||||    
T  21603 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccagattcaatctcgttctaagttatcatttaatctt 21504  T
Q  220 ta 221  Q
    ||    
T  21503 ta 21502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 221
Target Start/End: Complemental strand, 29595 - 29394
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| |||| |||  || || | ||||||| |   |  |||||||||||||| ||||||||||| ||| |||||     
T  29595 taggtctcattactacctaagggtccatccctaaccaattcaagcaacacagatcacaacattctcacttgcactcagttctggaagtgctcgcgaggcg 29496  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| | |||||||||| | ||| |||   |||||||| |||||||||||||| |||||||    
T  29495 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaaccagattcaatctcgttctaagttatcatttaatctt 29396  T
Q  220 ta 221  Q
    ||    
T  29395 ta 29394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 98 - 230
Target Start/End: Complemental strand, 191100 - 190968
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctca 197  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||   |||||||||||||| ||| | |||||||||    
T  191100 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaattttgttctaggttaaaccaggttcaatctca 191001  T
Q  198 ttctaagttatcatctaatctttattaaacatc 230  Q
    |||||||||||||| ||||| ||  ||||||||    
T  191000 ttctaagttatcatttaatcatttctaaacatc 190968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 99 - 230
Target Start/End: Complemental strand, 192802 - 192671
Alignment:
Q  99 tctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcat 198  Q
    |||||||||  ||| ||||| |||||||||||||| ||||||||||||||| ||||||||||||||   |||||||||||||| ||| | |||||||||     
T  192802 tctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaagtttgttctaggttaaaccaggttcaatctcaa 192703  T
Q  199 tctaagttatcatctaatctttattaaacatc 230  Q
    ||||||||||||| ||||| ||  ||||||||    
T  192702 tctaagttatcatttaatcatttctaaacatc 192671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 56376 - 56464
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  56376 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 56464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 13911 - 13768
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| | ||||| |||| | |||     
T  13911 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttggtctaagctaaa 13812  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaa 226  Q
    ||| | ||||||||| | ||||| ||||||||||||||| ||||    
T  13811 ccaggttcaatctcactataagtcatcatctaatctttaataaa 13768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 27 - 221
Target Start/End: Complemental strand, 6199 - 6005
Alignment:
Q  27 cattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggcaagagcat 126  Q
    |||||||||  ||||||||||||||||||||   |||||| |||  ||||   |  |||||||||| ||||||||||||||| ||| ||||| |||||||    
T  6199 cattactacttaggggtccatctctaatcaagttatgcgacacaagtcgcaacatcctcacttgcattcaattctggaagtgctcgcgaggcgagagcat 6100  T
Q  127 ctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    ||||||| ||||||||||||||| |||||||||||| |  ||||||||| | | | ||| | ||||||||| |||||||  ||||||||||||||    
T  6099 ctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaagcttaaccaggttcaatctcaatctaagtcttcatctaatcttta 6005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 6313 - 6103
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||||| ||| |||||  ||  || ||||||| ||| ||||||||||| ||| |||||     
T  6313 taggtcacattactacctaagggtccaaccctaatcaacttatgcgaaacaaatcgcaatatcctaacttgcattcagttctggaagtgctcgcgaggcg 6214  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| || | | |||||   |||||||||| | ||| ||||| ||||||||||||||| | |||||||||||||    
T  6213 agagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaaccaagttcaatctcattctaaatcatcatctaatctt 6114  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  6113 taataaacatc 6103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 46624 - 46414
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | | ||||||| ||||||||   |||||| |||||||||   |  || ||||||||||| ||||||||||| ||| ||||      
T  46624 taggtcacattactacctaagagtccatccctaatcaatttatgcgacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgaggag 46525  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| || ||  ||||||||||||||| |||||||| ||| | |||||||||| | ||| ||||| ||||||||| ||||||| |||||||||||||    
T  46524 agagcatttggtcaccatggcgagtacaagccagattcctaactaaagttgttctaagctaaaccaagttcaatctcactctaagtcatcatctaatctt 46425  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  46424 taataaacatc 46414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 1712 - 1922
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | ||||||||   |||| | |||||||||   | ||| ||||||| ||| ||||||||||| ||| |||||     
T  1712 taggtcacattactacctaagggtccaaccctaatcaatttatgcaaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcg 1811  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| ||||||||||||||| |||| | |||||   |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  1812 agagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 1911  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  1912 taataaacatc 1922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 4712 - 4859
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||| ||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| ||||||  | |||||||||| | |||     
T  4712 ctcacttgaactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaaataaagttgttctaagctaaa 4811  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | |||||||  |||||||| ||||||||||||||| ||||||||    
T  4812 ccaggttcaatcttgttctaagtcatcatctaatctttaataaacatc 4859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 13043 - 13190
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||| || || | ||||||| | |||| ||||| | |||     
T  13043 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccataatcccaactaaagttattctaagctaaa 13142  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||| | |||||||||||||| |||||||| ||||||||| ||||||||    
T  13143 ccaggttcaatctcattctatgttatcatttaatctttaataaacatc 13190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 61439 - 61381
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | |||||||||||||    
T  61439 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaag 61381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 65352 - 65267
Alignment:
Q  94 tcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||||| |||||||||||||| | |||||| |||||| ||  || ||||| |  |||||||||||||    
T  65352 tcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgaatacaagccaactttccaactaaggttgttctaggtt 65267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 612 - 822
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| | ||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  612 taggtcgcattactacctaagggtccatcccaaatcaacttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 711  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||  ||||||||||||||| |||||| |||||   ||||||||||   ||| ||| | |||||||| |||||| | |||||||||||||    
T  712 agagcatctgctcaccatggcgagtacaagccagatttccaactcaagttgttctaaactaaaccaggttcaatctcgttctaaatcatcatctaatctt 811  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  812 taataaacatc 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 2098 - 2308
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || | |||||||     |  |||||||||||||| |||| |||||| ||| |||||     
T  2098 taggtctcattactacctaagggtccatccctaatcaattcaagcaacacagatcataacattctcacttgcactcagttctcgaagtgctcgcgaggcg 2197  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| ||||||| | | |||||||| | ||| ||| | ||||||||| |||| ||| |||| |||||||    
T  2198 agagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaaccaggttcaatctcagtctaggttctcatttaatctt 2297  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  2298 taataaacatc 2308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 1981 - 1771
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||| | |||||| |  ||||||| ||||||| |   |  |||| ||||||||| ||||||||||| ||| |||||     
T  1981 taggtcacattactacctaagggtccaaccctaatcgattcatgcgacacagatcacaacattctcatttgcactcagttctggaagtgctcgcgaggcg 1882  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| |||||||||||||||  ||| | ||||| | |||||||||| | ||| ||| | |||||||| |||||| | |||||||||||||    
T  1881 agagcatctgctcgccatggcgagtacaagctagaattccaactaaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctt 1782  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  1781 taatacacatc 1771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 7512 - 7722
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | ||||||||| ||||||||  || || ||||| ||| |   |  |||||||||||||| || |||||||| ||| |||||     
T  7512 taggtctcattactacctaagggtccatccctaatcaattcaagcaatacaaatcactacattctcacttgcactcagttttggaagtgctcgcgaggcg 7611  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    ||||||| |||||| || ||||||| |||| |||| ||||||| | | |||||| | | ||| ||| | ||||||||| ||||||||||||| |||||||    
T  7612 agagcatttgctcgccacggcgagtccaagccagaatcccaactaaaattgttccaagctaaaccaggttcaatctcagtctaagttatcatttaatctt 7711  T
Q  220 tattaaacatc 230  Q
    || ||||||||    
T  7712 taataaacatc 7722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 120 - 230
Target Start/End: Original strand, 178974 - 179084
Alignment:
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||| | ||||||||||||||| ||||||||||||||| ||||||||| ||||| ||| | ||||||| ||||||||||||||| |||||||    
T  178974 agagcatctgctagccatggcgagtacaagccagattcccaacaatggttgttctaagttaaaccaggttcaatcttattctaagttatcatttaatctt 179073  T
Q  220 tattaaacatc 230  Q
    || ||| ||||    
T  179074 taataagcatc 179084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 2502 - 2412
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  |||||||||||||    
T  2502 tgcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaggtt 2412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 16949 - 16808
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||||||  |||| |||||| ||| ||||| |||||||||||||| ||||||||||||| | |||||||||||| |  ||||||||| | ||| |||||     
T  16949 tgcactcggttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacatgccagattcccaactaaggttgttctaagctaaaccaagt 16850  T
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    |||||||  |||||||| |||||||||| |||| ||||||||    
T  16849 tcaatcttgttctaagtcatcatctaatatttaataaacatc 16808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 2129 - 2258
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattc 200  Q
    |||||||| ||| ||||| ||||||||| |||| |||||||||||||||||||||| |||||   |||||||||| | ||| ||| | |||||||| ||     
T  2129 tggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaagttgttctaagataaaccaggttcaatctcgttt 2228  T
Q  201 taagttatcatctaatctttattaaacatc 230  Q
    ||| | ||||||||||||||||||||||||    
T  2229 taaatcatcatctaatctttattaaacatc 2258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 230
Target Start/End: Original strand, 9811 - 9940
Alignment:
Q  101 tggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattc 200  Q
    |||||||| ||| ||||| ||||||||| |||| |||||||||||||||||||||| |||||   |||||||||| | ||| ||| | |||||||| ||     
T  9811 tggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaagttgttctaagataaaccaggttcaatctcgttt 9910  T
Q  201 taagttatcatctaatctttattaaacatc 230  Q
    ||| | ||||||||||||||||||||||||    
T  9911 taaatcatcatctaatctttattaaacatc 9940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 226
Target Start/End: Complemental strand, 30573 - 30436
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||||||| ||||| ||||| ||| ||||| |||||||||||||| ||||||||||| ||| |||||| |||||   |||||||||| | ||| ||| |     
T  30573 tgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtataagccagatttccaactccagttgttctaagctaaaccaggt 30474  T
Q  189 tcaatctcattctaagttatcatctaatctttattaaa 226  Q
    |||||||| |||||| | ||||||||||||||||||||    
T  30473 tcaatctcgttctaaatcatcatctaatctttattaaa 30436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 2157 - 2213
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  2157 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 2213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 3128 - 3271
Alignment:
Q  87 cttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaa 186  Q
    |||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||| | |||||   |||||||||| | ||| |||     
T  3128 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattccaacttaagttgttctaagctaaaccag 3227  T
Q  187 gctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    |  ||||||||||||| |||||||| ||||||||| ||||||||    
T  3228 gtgcaatctcattctaggttatcatttaatctttaataaacatc 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 230
Target Start/End: Original strand, 6794 - 6937
Alignment:
Q  87 cttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaa 186  Q
    |||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||  |||||||| |||| | |||||   |||||||||| | ||| |||     
T  6794 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagaattccaacttaagttgttctaagctaaaccag 6893  T
Q  187 gctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    |  ||||||||||||| |||||||| ||||||||| ||||||||    
T  6894 gtgcaatctcattctaggttatcatttaatctttaataaacatc 6937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 804 - 945
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    ||||||||||||||||| | |||||||||||||||||||  |||||| |||||||||  ||  |||| || |||||| ||||||||||| ||  |||||     
T  804 taggtctcattactaccgaagggtccatctctaatcaaattatgcgacacagatcgcaatatcctcatttacactcagttctggaagtgctcacgaggcg 903  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaa 161  Q
    ||| |||||||||| |||||||||| || | |||| ||||||    
T  904 agaacatctgctcgccatggcgagttcagggcagaatcccaa 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 230
Target Start/End: Original strand, 377 - 589
Alignment:
Q  18 attaggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagagg 117  Q
    |||||||| |||||||||| | ||||||||| ||||||||   |||||| |||||||    ||  || ||||||||||| |||| |||||| | | ||||    
T  377 attaggtcacattactacctaagggtccatccctaatcaatttatgcgacacagatccaaatatcctaacttgcactcagttctagaagtgcttgcgagg 476  T
Q  118 caagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatc 217  Q
      ||||||||| |||| ||||||||||||||| |||| | ||||| | |||||||||| | ||| ||| | |||||||| |||||||| ||| ||||| |    
T  477 agagagcatctactcgccatggcgagtacaagccagaattccaactaaagttgttctaagctaaaccaggttcaatctcgttctaagtcatcgtctaacc 576  T
Q  218 tttattaaacatc 230  Q
     ||| ||||||||    
T  577 attaataaacatc 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 5872 - 6014
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||| |  ||||||| | | ||| ||| |    
T  5872 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttcgaagctaaaccagg 5971  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     |||||||  |||||||| ||||||||||||||| ||||||||    
T  5972 ttcaatcttgttctaagtcatcatctaatctttaataaacatc 6014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 7067 - 7209
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| | |||||||| | | ||| ||| |    
T  7067 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattacaactaaagttgttcaaagctaaaccagg 7166  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     |||||||  |||||||| ||||||||||||||| ||||||||    
T  7167 ttcaatcttgttctaagtcatcatctaatctttaataaacatc 7209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 1183 - 1325
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| |||| |||||| ||| ||||| ||| |||||||||| ||||||||||||||| |||||| |||||   |||||||||| | |||  || |    
T  1183 ttgcattcagttctagaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaatcagg 1282  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     ||||||||||||||| | ||||||||||||||| || |||||    
T  1283 ttcaatctcattctaaatcatcatctaatctttaatagacatc 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 18461 - 18371
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||  |  |||||||||||||    
T  18461 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaataaggttgttctaggtt 18371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 51; Significance: 2e-20; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 19465 - 19555
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  19465 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 19555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 13181 - 13271
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||  ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  13181 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 13271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 62541 - 62597
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||  ||| ||||| |||||||||||||| |||||||||||||||    
T  62541 ctcaattctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaag 62597  T

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Target: scaffold0037 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 20 - 230
Target Start/End: Complemental strand, 21466 - 21256
Alignment:
Q  20 taggtctcattactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtggtcgagaggca 119  Q
    |||||| |||||||||| | ||||||||| ||||||||   |||||| |||||||||   |  || ||||||| ||| ||||||||||| ||| |||||     
T  21466 taggtcacattactacctaagggtccatccctaatcaatttatgcgaaacagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcg 21367  T
Q  120 agagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatctt 219  Q
    |||||||||||||| || |||||||||||| |||| | ||||| |  |||| |||| | ||| ||| | |||||||||| |||  ||||||| ||||| |    
T  21366 agagcatctgctcgccacggcgagtacaagccagaattccaactaaggttgctctaagctaaaccaggttcaatctcatcctacattatcatttaatcct 21267  T
Q  220 tattaaacatc 230  Q
    || || |||||    
T  21266 taatacacatc 21256  T

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Target: scaffold0036 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 66244 - 66154
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  66244 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 66154  T

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Target: scaffold0009 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 228202 - 228112
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  228202 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 228112  T

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Target: scaffold0003 (Bit Score: 51; Significance: 2e-20; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 71590 - 71680
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  71590 tgcactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 71680  T

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Target: scaffold0003; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 96883 - 96973
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  96883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 96973  T

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Target: scaffold0003; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 139988 - 140077
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||||| |||||| ||||||||||||||| |||| | ||||| |  |||||||||||||    
T  139988 gcactcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgttctaggtt 140077  T

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Target: scaffold0003; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 413870 - 413822
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||    
T  413870 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 413822  T

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Target: scaffold1461 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 207 - 296
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  207 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 296  T

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Target: scaffold0585 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 9613 - 9701
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||| |  ||||||| |||||    
T  9613 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgttccaggtt 9701  T

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Target: scaffold0193 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 9701 - 9787
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  9701 ctcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 9787  T

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Target: scaffold0107 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 15247 - 15157
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||| ||||||||| |||||||||||| |  ||||||| |||||    
T  15247 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgttccaggtt 15157  T

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Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 89 - 179
Target Start/End: Original strand, 173567 - 173657
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  173567 tgcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 173657  T

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Target: scaffold1220 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 158
Target Start/End: Original strand, 2079 - 2148
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcc 158  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||||    
T  2079 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcc 2148  T

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Target: scaffold0410 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 11658 - 11747
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||| |||||| |  |||||||||||||    
T  11658 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatccccaactaaggttgttctaggtt 11747  T

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Target: scaffold0177 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 13316 - 13243
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||  |||||||||||||| ||||||||||||||| ||||||||||||    
T  13316 tgcactcagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgagtacaagccagattcccaac 13243  T

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Target: scaffold0168 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 3359 - 3286
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaac 162  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||||| |||||    
T  3359 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaac 3286  T

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Target: scaffold0120 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 19845 - 19756
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||| |||||||| |||||||||||| |  ||||||| |||||    
T  19845 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgttccaggtt 19756  T

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Target: scaffold0070 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 10181 - 10270
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| ||||||| |  ||||||| |||||    
T  10181 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttccaggtt 10270  T

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Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 24796 - 24707
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||| |||||||| ||||||||||||||| |||||||||||| |  ||||||| |||||    
T  24796 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacaagccagattcccaactaaggttgttccaggtt 24707  T

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Target: scaffold1326 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 1324 - 1187
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||||||||||| | ||||||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||| | ||||||||          ||||| |    
T  1324 ctcacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagaattccaacaat----------ggttatt 1235  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||||| |||||||  |||||||| | ||||||||||||| ||||||||    
T  1234 ccaagttcaatcttgttctaagtcaacatctaatctttaataaacatc 1187  T

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Target: scaffold0483 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 608 - 684
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaat 165  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||||    
T  608 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaat 684  T

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Target: scaffold0109 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 45395 - 45471
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaat 165  Q
    |||||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | ||||||||    
T  45395 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaat 45471  T

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Target: scaffold0109; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 11129 - 11071
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| ||||| |||||||||    
T  11129 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaag 11071  T

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Target: scaffold0109; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 38646 - 38588
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||||| |||||| ||  ||||| |||| ||||||||| |||||||||||||||    
T  38646 cactcaattcttgaagtgctcacgaggcgagaggatctgctcgccatggcgagtacaag 38588  T

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Target: scaffold0327 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 230
Target Start/End: Original strand, 566 - 698
Alignment:
Q  88 ttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaag 187  Q
    ||||| ||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||  ||| | ||||||||          ||||| |||| |    
T  566 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacaat----------ggttattccagg 655  T
Q  188 ctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
     |||||||  |||||||| ||||||||||||||||||||||||    
T  656 ttcaatcttgttctaagtcatcatctaatctttattaaacatc 698  T

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Target: scaffold0220 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 230
Target Start/End: Complemental strand, 4767 - 4620
Alignment:
Q  83 ctcacttgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 182  Q
    |||| ||||||||  || ||||| || ||| ||||| ||||||||| |||  |||| |||||||||| |||| | ||||| | |||||||||| | |||     
T  4767 ctcaattgcactcggttttggaaatgctcgcgaggcgagagcatcttctcaccatgacgagtacaagccagaattccaactaaagttgttctaagctaaa 4668  T
Q  183 ccaagctcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    ||  | ||||||||| ||||||| ||||||||||||||| ||||||||    
T  4667 cccggttcaatctcactctaagtcatcatctaatctttaataaacatc 4620  T

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Target: scaffold0280 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 19120 - 19030
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| |||| | |||||||| ||| ||| |||||    
T  19120 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagaattccaacaatggttattccaggtt 19030  T

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Target: scaffold1895 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 1037 - 944
Alignment:
Q  128 tgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagctcaatctcattctaagttatcatctaatcttta 221  Q
    |||||| |||||||||||| || |||||||||||| |  ||||||||| | ||| | | | ||||||||||||||||||||||| |||||||||    
T  1037 tgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaactaggttcaatctcattctaagttatcatttaatcttta 944  T

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Target: scaffold1895; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 1116 - 1036
Alignment:
Q  28 attactacccaggggtccatctctaatcaaaacatgcgatacagatcgcgttaaactcacttgcactcaattctggaagtg 108  Q
    ||||||||||| || ||||||||||||||||  |||||| |||||||||  ||  |||||||||||||| |||||||||||    
T  1116 attactacccaaggatccatctctaatcaaattatgcgacacagatcgcaatatcctcacttgcactcagttctggaagtg 1036  T

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Target: scaffold0010 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 23494 - 23583
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| || |||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||||||| |||| |  ||||||| |||||    
T  23494 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgttccaggtt 23583  T

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Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 242335 - 242424
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||| |  |||||||||||||    
T  242335 gcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgttctaggtt 242424  T

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Target: scaffold0372 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 4928 - 4840
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  4928 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 4840  T

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Target: scaffold0346 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 205
Target Start/End: Original strand, 15374 - 15490
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaatccaagc 188  Q
    |||||||| ||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| |  |||| | |||||||||| | ||| ||| |     
T  15374 tgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatttcaactaaagttgttctaagctaaaccaggt 15473  T
Q  189 tcaatctcattctaagt 205  Q
    |||||||  ||||||||    
T  15474 tcaatcttgttctaagt 15490  T

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Target: scaffold0342 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 7098 - 7042
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtac 146  Q
    ||||||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  7098 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtac 7042  T

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Target: scaffold0284 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 91 - 179
Target Start/End: Original strand, 18633 - 18721
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    |||||||||||||||||| ||| ||||| |||||||||||||| | | |||||| |||| |||||||||||| |  ||||||| |||||    
T  18633 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccttagcgagttcaagccagattcccaactaaggttgttccaggtt 18721  T

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Target: scaffold1552 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 639 - 716
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttcta 175  Q
    ||||||||||| ||| ||||| |||||||| ||||| ||||||||||||||| |||| | |||||||  |||||||||    
T  639 ttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaacaaaggttgttcta 716  T

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Target: scaffold0439 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 98 - 179
Target Start/End: Complemental strand, 2255 - 2174
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  2255 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactacggttgttccaggtt 2174  T

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Target: scaffold0439; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 98 - 149
Target Start/End: Complemental strand, 10115 - 10064
Alignment:
Q  98 ttctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  10115 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 10064  T

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Target: scaffold0184 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 4052 - 3995
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtaca 147  Q
    ||||||| ||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  4052 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaca 3995  T

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Target: scaffold0171 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 35338 - 35249
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| ||||||||||| ||| ||||| ||||||||| |||| ||||||||||||||| ||| || ||||| |  ||||||| |||||    
T  35338 gcactcagttctggaagtgctcgcgaggcgagagcatctcctcgccatggcgagtacaagccaggtttccaactaaggttgttccaggtt 35249  T

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Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 36583 - 36672
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| |||| |||||| ||| ||||| |||||||||||||| ||||||||||||||| |||| | |||||    |||||||||||||    
T  36583 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaggttgttctaggtt 36672  T

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Target: scaffold0371 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 15618 - 15674
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| ||| ||||| |||||||||||||| ||| |||||||||||    
T  15618 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtacaag 15674  T

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Target: scaffold0028 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 91 - 179
Target Start/End: Complemental strand, 58545 - 58457
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||| |||||| ||| ||||| |||||||||||||| | ||||||||||||| ||  || ||||| |  |||||||||||||    
T  58545 cactcaattctagaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccaactttccaactaaggttgttctaggtt 58457  T

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Target: scaffold0130 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 149
Target Start/End: Complemental strand, 5828 - 5769
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||| ||||||||||| ||| ||||| |||||||| ||||| |||||||||||||||    
T  5828 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaag 5769  T

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Target: scaffold0546 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 91 - 149
Target Start/End: Original strand, 2178 - 2236
Alignment:
Q  91 cactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    ||||||||| |||||||| ||| ||||| |||||||||||||| ||||| |||||||||    
T  2178 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaag 2236  T

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Target: scaffold0334 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 179
Target Start/End: Complemental strand, 18184 - 18099
Alignment:
Q  94 tcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||| ||| ||||  |||||||| ||||| ||| ||||||||||| |||||||| ||| |  ||||||| |||||    
T  18184 tcaattctggaagtgctcgcgaggtgagagcatcagctcgccatagcgagtacaagccagattcctaactaaggttgttccaggtt 18099  T

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Target: scaffold0015 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 192144 - 192055
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||||||||||||||| ||  ||||| |||||||| ||||| || |||||||||||| |||| | |||| | | ||||||| |||||    
T  192144 gcactcaattctggaagtgctcacgaggcgagagcatcagctcgccacggcgagtacaagccagaattccaatactggttgttccaggtt 192055  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 16488 - 16432
Alignment:
Q  93 ctcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaag 149  Q
    |||||||||||||||| | | ||||| || ||||||||||| |||||||||||||||    
T  16488 ctcaattctggaagtgcttgcgaggcgagtgcatctgctcgccatggcgagtacaag 16432  T

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Target: scaffold0138 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 179
Target Start/End: Complemental strand, 30036 - 29946
Alignment:
Q  89 tgcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| | |||||||||| ||| ||||| |||| |||| |||| ||||||||||||||| ||  |||||||  |  |||||||||||||    
T  30036 tgcactccaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaaataatgttgttctaggtt 29946  T

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Target: scaffold0637 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 179
Target Start/End: Original strand, 8849 - 8938
Alignment:
Q  90 gcactcaattctggaagtggtcgagaggcaagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggtt 179  Q
    ||||||| |||||||| || ||| ||||| ||||||||| |||| ||||||||||||  | |||||| ||||| |  ||||||| |||||    
T  8849 gcactcagttctggaaatgctcgcgaggcgagagcatctcctcgccatggcgagtacttgccagatttccaactaaggttgttccaggtt 8938  T

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Target: scaffold0064 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 64391 - 64350
Alignment:
Q  189 tcaatctcattctaagttatcatctaatctttattaaacatc 230  Q
    |||||||||||||| |||||||| ||||||||| ||||||||    
T  64391 tcaatctcattctatgttatcatttaatctttaataaacatc 64350  T

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