View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15917_low_2 (Length: 599)

Name: NF15917_low_2
Description: NF15917
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15917_low_2
NF15917_low_2
[»] chr6 (47 HSPs)
chr6 (22-290)||(16111551-16111806)
chr6 (441-583)||(16111412-16111554)
chr6 (313-444)||(34446565-34446697)
chr6 (313-375)||(6389743-6389805)
chr6 (320-382)||(17168453-17168515)
chr6 (320-438)||(26247433-26247551)
chr6 (366-434)||(32978842-32978910)
chr6 (366-437)||(4877991-4878061)
chr6 (313-434)||(12235462-12235578)
chr6 (320-376)||(19602177-19602233)
chr6 (313-376)||(30781290-30781353)
chr6 (365-437)||(10339054-10339126)
chr6 (26-78)||(12696338-12696390)
chr6 (26-90)||(16766711-16766775)
chr6 (362-437)||(18367891-18367966)
chr6 (313-360)||(7625122-7625169)
chr6 (313-372)||(12086345-12086404)
chr6 (313-375)||(2153884-2153946)
chr6 (392-437)||(6389806-6389851)
chr6 (399-444)||(7378060-7378105)
chr6 (33-78)||(17327648-17327693)
chr6 (314-437)||(34894968-34895092)
chr6 (320-368)||(6299519-6299567)
chr6 (320-368)||(6306329-6306377)
chr6 (362-437)||(8365448-8365523)
chr6 (26-90)||(9107351-9107415)
chr6 (327-437)||(17327590-17327700)
chr6 (331-366)||(28664698-28664733)
chr6 (33-87)||(9195738-9195792)
chr6 (321-355)||(9195771-9195805)
chr6 (37-87)||(21395292-21395342)
chr6 (33-74)||(7973675-7973716)
chr6 (362-438)||(8714035-8714111)
chr6 (390-434)||(9025448-9025493)
chr6 (362-438)||(9107298-9107374)
chr6 (362-437)||(16766752-16766827)
chr6 (321-370)||(24832596-24832645)
chr6 (321-437)||(28715303-28715414)
chr6 (399-436)||(31385011-31385048)
chr6 (366-438)||(34595182-34595254)
chr6 (390-437)||(7248440-7248488)
chr6 (401-437)||(10649371-10649407)
chr6 (323-359)||(13364718-13364754)
chr6 (47-87)||(16488574-16488614)
chr6 (366-437)||(28152146-28152217)
chr6 (26-74)||(31384934-31384982)
chr6 (362-437)||(32313459-32313535)
[»] chr5 (37 HSPs)
chr5 (313-428)||(43554521-43554636)
chr5 (33-256)||(12264643-12264867)
chr5 (329-433)||(36577616-36577719)
chr5 (327-437)||(26205694-26205805)
chr5 (322-382)||(39695989-39696049)
chr5 (313-399)||(25863204-25863290)
chr5 (467-524)||(12264530-12264587)
chr5 (367-437)||(17123097-17123166)
chr5 (26-87)||(39698555-39698616)
chr5 (320-359)||(2577193-2577232)
chr5 (321-399)||(21137697-21137773)
chr5 (313-360)||(42469221-42469268)
chr5 (314-372)||(7997166-7997224)
chr5 (321-395)||(14574027-14574100)
chr5 (33-90)||(18592094-18592151)
chr5 (321-370)||(31264446-31264495)
chr5 (33-74)||(36838564-36838605)
chr5 (320-376)||(5467974-5468030)
chr5 (321-365)||(12927662-12927706)
chr5 (362-437)||(21522805-21522880)
chr5 (362-437)||(21533371-21533446)
chr5 (366-437)||(43564929-43565000)
chr5 (320-375)||(18607094-18607149)
chr5 (362-436)||(21542085-21542159)
chr5 (321-435)||(30502330-30502439)
chr5 (321-435)||(30542673-30542782)
chr5 (399-437)||(19429508-19429546)
chr5 (399-437)||(23289998-23290036)
chr5 (33-90)||(3966524-3966581)
chr5 (38-87)||(21542056-21542105)
chr5 (400-436)||(3966596-3966632)
chr5 (362-437)||(7677760-7677835)
chr5 (39-87)||(11685966-11686013)
chr5 (38-78)||(14873543-14873583)
chr5 (366-437)||(21576685-21576756)
chr5 (47-87)||(21814296-21814336)
chr5 (362-437)||(39698596-39698671)
[»] chr2 (40 HSPs)
chr2 (126-271)||(39479790-39479936)
chr2 (320-436)||(23354582-23354704)
chr2 (320-435)||(23354926-23355047)
chr2 (313-376)||(25544481-25544544)
chr2 (320-399)||(24011043-24011122)
chr2 (320-401)||(37986786-37986867)
chr2 (320-414)||(38919213-38919313)
chr2 (452-566)||(39479924-39480036)
chr2 (323-437)||(11307934-11308053)
chr2 (362-437)||(37419798-37419873)
chr2 (366-435)||(2438661-2438730)
chr2 (313-358)||(22085004-22085049)
chr2 (367-437)||(37497169-37497240)
chr2 (320-374)||(10535757-10535811)
chr2 (320-382)||(19573985-19574047)
chr2 (360-437)||(30717459-30717536)
chr2 (320-437)||(34006930-34007043)
chr2 (33-87)||(34784966-34785020)
chr2 (366-438)||(24009343-24009415)
chr2 (362-438)||(26769566-26769642)
chr2 (320-372)||(12748691-12748743)
chr2 (366-437)||(18840953-18841024)
chr2 (321-437)||(18889519-18889642)
chr2 (401-437)||(21616828-21616864)
chr2 (362-437)||(35056923-35056998)
chr2 (26-77)||(12668417-12668468)
chr2 (313-376)||(30563409-30563472)
chr2 (40-87)||(35056896-35056943)
chr2 (154-209)||(39399676-39399730)
chr2 (321-355)||(30527612-30527646)
chr2 (321-359)||(36281693-36281731)
chr2 (372-437)||(41849354-41849420)
chr2 (33-78)||(13204046-13204091)
chr2 (33-74)||(15909629-15909670)
chr2 (38-87)||(27286276-27286325)
chr2 (327-359)||(8300232-8300264)
chr2 (33-85)||(32749811-32749863)
chr2 (26-74)||(36756341-36756389)
chr2 (26-58)||(40361767-40361799)
chr2 (390-437)||(42511322-42511370)
[»] chr8 (40 HSPs)
chr8 (317-437)||(39820433-39820547)
chr8 (298-436)||(13009423-13009566)
chr8 (320-437)||(14513108-14513226)
chr8 (294-378)||(13845209-13845299)
chr8 (302-439)||(40063941-40064083)
chr8 (320-386)||(8017493-8017559)
chr8 (313-436)||(3658147-3658271)
chr8 (362-437)||(22652031-22652106)
chr8 (320-372)||(35431140-35431192)
chr8 (313-435)||(44067516-44067644)
chr8 (313-372)||(1676712-1676771)
chr8 (321-433)||(12559044-12559157)
chr8 (26-87)||(15816113-15816174)
chr8 (313-382)||(26915230-26915299)
chr8 (321-437)||(15816058-15816180)
chr8 (366-437)||(17751703-17751775)
chr8 (366-437)||(17760690-17760762)
chr8 (366-437)||(24413499-24413570)
chr8 (366-437)||(29510233-29510304)
chr8 (362-437)||(34450961-34451036)
chr8 (304-437)||(30067968-30068096)
chr8 (360-437)||(28745551-28745628)
chr8 (26-87)||(2572040-2572101)
chr8 (321-437)||(33405324-33405435)
chr8 (321-435)||(3025559-3025668)
chr8 (383-437)||(11803334-11803389)
chr8 (315-370)||(28883880-28883935)
chr8 (33-71)||(3025572-3025610)
chr8 (26-72)||(8343330-8343376)
chr8 (399-437)||(27213606-27213644)
chr8 (373-437)||(4673354-4673418)
chr8 (396-437)||(9383044-9383085)
chr8 (313-366)||(12985392-12985445)
chr8 (385-437)||(13397617-13397670)
chr8 (26-71)||(27101529-27101573)
chr8 (362-438)||(29447499-29447575)
chr8 (320-357)||(31586292-31586329)
chr8 (366-437)||(3951476-3951547)
chr8 (38-74)||(16867202-16867238)
chr8 (366-437)||(36450694-36450765)
[»] chr4 (44 HSPs)
chr4 (314-438)||(3144586-3144710)
chr4 (313-438)||(24343507-24343633)
chr4 (313-433)||(20743210-20743337)
chr4 (322-413)||(6273953-6274050)
chr4 (333-437)||(23386166-23386277)
chr4 (320-437)||(53381530-53381644)
chr4 (324-437)||(17876166-17876285)
chr4 (320-437)||(18513175-18513293)
chr4 (313-375)||(31243545-31243607)
chr4 (313-438)||(34515810-34515933)
chr4 (320-437)||(20521785-20521901)
chr4 (322-360)||(49659535-49659573)
chr4 (320-437)||(7012073-7012197)
chr4 (391-447)||(37203324-37203381)
chr4 (323-399)||(944641-944717)
chr4 (366-437)||(23292926-23292997)
chr4 (360-438)||(11931333-11931411)
chr4 (362-436)||(30982808-30982882)
chr4 (320-438)||(19230240-19230361)
chr4 (26-87)||(51701272-51701333)
chr4 (320-373)||(53968553-53968606)
chr4 (383-438)||(715544-715600)
chr4 (383-438)||(752870-752926)
chr4 (33-71)||(10499270-10499308)
chr4 (399-437)||(30299010-30299048)
chr4 (399-437)||(30327878-30327916)
chr4 (313-355)||(32910551-32910593)
chr4 (302-356)||(47191009-47191062)
chr4 (26-71)||(2361975-2362020)
chr4 (33-90)||(13134471-13134528)
chr4 (320-357)||(20119952-20119989)
chr4 (321-437)||(35157925-35158036)
chr4 (38-71)||(36409512-36409545)
chr4 (38-71)||(36423678-36423711)
chr4 (390-437)||(904004-904052)
chr4 (26-78)||(3947759-3947811)
chr4 (362-437)||(5414101-5414176)
chr4 (401-437)||(18844423-18844459)
chr4 (362-437)||(22234819-22234894)
chr4 (401-437)||(24613630-24613666)
chr4 (383-438)||(29205532-29205588)
chr4 (33-85)||(30838231-30838283)
chr4 (320-360)||(39507131-39507171)
chr4 (320-356)||(50848319-50848355)
[»] chr1 (46 HSPs)
chr1 (313-437)||(42004882-42005006)
chr1 (314-399)||(6936373-6936458)
chr1 (313-437)||(40747707-40747832)
chr1 (308-432)||(351023-351147)
chr1 (313-354)||(23440010-23440051)
chr1 (366-437)||(32461393-32461464)
chr1 (362-437)||(47989552-47989627)
chr1 (304-371)||(6573981-6574047)
chr1 (362-432)||(9629834-9629904)
chr1 (33-87)||(25361907-25361961)
chr1 (366-438)||(32899938-32900011)
chr1 (33-78)||(34712376-34712421)
chr1 (313-369)||(48415728-48415785)
chr1 (362-437)||(9828099-9828174)
chr1 (26-90)||(17754325-17754389)
chr1 (321-438)||(34712322-34712434)
chr1 (321-438)||(17831461-17831582)
chr1 (33-87)||(21038104-21038158)
chr1 (313-375)||(39101179-39101241)
chr1 (33-87)||(44482251-44482305)
chr1 (26-87)||(6612155-6612216)
chr1 (321-437)||(22515827-22515938)
chr1 (321-435)||(1486646-1486760)
chr1 (26-78)||(1486702-1486754)
chr1 (362-437)||(18556385-18556460)
chr1 (366-437)||(37598879-37598950)
chr1 (362-437)||(40917804-40917879)
chr1 (313-406)||(43328467-43328566)
chr1 (321-399)||(20157323-20157401)
chr1 (390-437)||(34741918-34741965)
chr1 (390-437)||(48450550-48450597)
chr1 (33-75)||(7918207-7918249)
chr1 (320-378)||(11634118-11634176)
chr1 (33-87)||(15449216-15449270)
chr1 (313-374)||(21145466-21145528)
chr1 (399-437)||(22881567-22881605)
chr1 (364-437)||(25934673-25934746)
chr1 (366-435)||(42359391-42359460)
chr1 (33-87)||(47989518-47989572)
chr1 (33-90)||(5944304-5944361)
chr1 (314-437)||(22794018-22794136)
chr1 (33-74)||(25272503-25272544)
chr1 (33-90)||(31694691-31694748)
chr1 (33-78)||(35919269-35919314)
chr1 (395-436)||(48415667-48415708)
chr1 (399-435)||(398735-398771)
[»] chr7 (36 HSPs)
chr7 (313-437)||(4017729-4017853)
chr7 (313-438)||(23751900-23752019)
chr7 (302-437)||(29812598-29812733)
chr7 (323-437)||(7133212-7133327)
chr7 (313-440)||(38804486-38804614)
chr7 (313-399)||(23930219-23930305)
chr7 (321-438)||(21880160-21880272)
chr7 (313-432)||(43249993-43250118)
chr7 (320-383)||(10230062-10230125)
chr7 (320-395)||(17780061-17780136)
chr7 (366-437)||(598256-598327)
chr7 (313-369)||(13427576-13427632)
chr7 (322-437)||(41229237-41229348)
chr7 (320-399)||(5938479-5938558)
chr7 (33-75)||(18013070-18013112)
chr7 (320-369)||(22683758-22683807)
chr7 (26-87)||(24339656-24339717)
chr7 (362-438)||(24339697-24339773)
chr7 (390-437)||(9778576-9778624)
chr7 (366-437)||(15680857-15680928)
chr7 (388-436)||(18035806-18035854)
chr7 (33-76)||(7328686-7328729)
chr7 (321-437)||(1433462-1433578)
chr7 (372-437)||(5409771-5409836)
chr7 (40-78)||(5548704-5548742)
chr7 (33-87)||(8160437-8160491)
chr7 (33-87)||(15902843-15902897)
chr7 (33-87)||(32308141-32308195)
chr7 (320-358)||(46644701-46644739)
chr7 (403-436)||(4794985-4795018)
chr7 (26-87)||(9408318-9408379)
chr7 (362-437)||(2334305-2334379)
chr7 (38-74)||(10042963-10042999)
chr7 (320-372)||(12278842-12278894)
chr7 (366-437)||(21864856-21864927)
chr7 (390-437)||(40131939-40131987)
[»] chr3 (43 HSPs)
chr3 (293-442)||(25074768-25074919)
chr3 (314-431)||(12704597-12704715)
chr3 (313-436)||(15864833-15864950)
chr3 (320-437)||(27903639-27903757)
chr3 (320-414)||(14223811-14223905)
chr3 (321-435)||(29508452-29508567)
chr3 (320-399)||(25326433-25326512)
chr3 (313-437)||(8903432-8903554)
chr3 (314-437)||(21211289-21211413)
chr3 (320-388)||(25892467-25892535)
chr3 (320-437)||(52369782-52369906)
chr3 (325-382)||(21367289-21367346)
chr3 (314-399)||(25652004-25652089)
chr3 (362-437)||(41961579-41961654)
chr3 (362-436)||(37077413-37077488)
chr3 (362-437)||(14209168-14209243)
chr3 (313-435)||(24204983-24205100)
chr3 (366-437)||(40993275-40993346)
chr3 (319-370)||(3730167-3730218)
chr3 (320-367)||(21149074-21149121)
chr3 (294-369)||(34189409-34189483)
chr3 (33-87)||(14209134-14209188)
chr3 (323-436)||(51512118-51512232)
chr3 (33-86)||(8039820-8039873)
chr3 (366-438)||(20503513-20503585)
chr3 (321-382)||(34307770-34307831)
chr3 (321-437)||(55401083-55401194)
chr3 (33-76)||(11313795-11313838)
chr3 (320-359)||(20691326-20691365)
chr3 (320-359)||(40150584-40150623)
chr3 (321-367)||(1830351-1830397)
chr3 (33-71)||(49505154-49505192)
chr3 (26-87)||(1509553-1509614)
chr3 (26-75)||(1550154-1550203)
chr3 (399-436)||(34910398-34910435)
chr3 (391-443)||(51206287-51206340)
chr3 (26-70)||(10268487-10268531)
chr3 (366-437)||(13845465-13845536)
chr3 (26-74)||(15314873-15314921)
chr3 (362-438)||(16789067-16789142)
chr3 (320-372)||(25365469-25365521)
chr3 (26-78)||(25948880-25948932)
chr3 (390-437)||(34185052-34185100)
[»] scaffold0003 (2 HSPs)
scaffold0003 (362-438)||(241649-241725)
scaffold0003 (33-87)||(241615-241669)
[»] scaffold0199 (1 HSPs)
scaffold0199 (313-372)||(1949-2008)
[»] scaffold1528 (1 HSPs)
scaffold1528 (26-90)||(1049-1113)
[»] scaffold0778 (1 HSPs)
scaffold0778 (320-384)||(4413-4477)
[»] scaffold0044 (2 HSPs)
scaffold0044 (322-430)||(53189-53303)
scaffold0044 (33-86)||(53201-53254)
[»] scaffold0652 (1 HSPs)
scaffold0652 (366-436)||(403-473)
[»] scaffold0598 (1 HSPs)
scaffold0598 (320-378)||(8047-8105)
[»] scaffold0171 (2 HSPs)
scaffold0171 (33-87)||(23532-23586)
scaffold0171 (33-78)||(23441-23486)
[»] scaffold0024 (2 HSPs)
scaffold0024 (40-90)||(68223-68273)
scaffold0024 (321-365)||(68249-68293)
[»] scaffold0008 (1 HSPs)
scaffold0008 (38-87)||(263356-263405)
[»] scaffold0793 (1 HSPs)
scaffold0793 (383-438)||(4820-4876)
[»] scaffold0136 (2 HSPs)
scaffold0136 (362-437)||(3778-3853)
scaffold0136 (33-87)||(3833-3887)
[»] scaffold0049 (1 HSPs)
scaffold0049 (323-359)||(56932-56968)
[»] scaffold0019 (2 HSPs)
scaffold0019 (362-437)||(71780-71855)
scaffold0019 (33-90)||(71746-71803)
[»] scaffold0223 (1 HSPs)
scaffold0223 (26-77)||(20186-20237)
[»] scaffold0057 (1 HSPs)
scaffold0057 (39-90)||(24052-24102)
[»] scaffold0236 (1 HSPs)
scaffold0236 (33-74)||(25765-25806)
[»] scaffold0123 (1 HSPs)
scaffold0123 (33-90)||(44506-44563)
[»] scaffold0022 (1 HSPs)
scaffold0022 (321-366)||(90851-90896)
[»] scaffold0007 (1 HSPs)
scaffold0007 (320-435)||(225199-225320)
[»] scaffold0380 (1 HSPs)
scaffold0380 (390-437)||(8672-8720)
[»] scaffold0086 (1 HSPs)
scaffold0086 (33-77)||(2949-2993)
[»] scaffold0011 (1 HSPs)
scaffold0011 (319-359)||(240034-240074)


Alignment Details
Target: chr6 (Bit Score: 209; Significance: 1e-114; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 22 - 290
Target Start/End: Complemental strand, 16111806 - 16111551
Alignment:
Q  22 atagtttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaaccaggacacttgtaatcagagaagtgtatgcg 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||| |    
T  16111806 atagtttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacg-------------tgtaatcagagaagtgtatgtg 16111720  T
Q  122 cttataaaaatgaatcatcaagtaattctacattacagttccagaatcaaactcaaaggaaaaacacgaagaacaatgacaatataaatattctaagctt 221  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16111719 cttataaaaatgaatcatcaagtaattctacattacagttccagaatcaaactcaagggaaaaacacgaagaacaatgacaatataaatattctaagctt 16111620  T
Q  222 ttaacattgcatggtgttgatttgttgtagaaaaagtcattaaaataaaaactggaaagagaaatataa 290  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16111619 ttaacattgcatggtgttgatttgttgtagaaaaagtcattaaaataaaaactggaaagagaaacataa 16111551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 441 - 583
Target Start/End: Complemental strand, 16111554 - 16111412
Alignment:
Q  441 ataacaaaaagcatgaaaataaaatttgttcaagttaagattcttacaagattcaattgaaaaattcataggtcaaacattgcatgcaatcgatccataa 540  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16111554 ataacaaaaaacatgaaaataaaatttgttcaagttaagattcttacaagattcaattgaaatattcataggtcaaacattgcatgcaatcgatccataa 16111455  T
Q  541 tagatttatgaggtttaagtctctaacattacatgttttttat 583  Q
    |||||||||||||||||||  |||||||||| |||||||||||    
T  16111454 tagatttatgaggtttaagaatctaacattatatgttttttat 16111412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 313 - 444
Target Start/End: Original strand, 34446565 - 34446697
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtcta 411  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||  |||||||||| | || ||||| |||||||  |||    
T  34446565 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtccaacaccgacgcgtatctgacactgggacacaccta 34446664  T
Q  412 atccaagaagtgtccgtgcttcatagaatataa 444  Q
    ||||||| |||||||||||||||||| ||||||    
T  34446665 atccaaggagtgtccgtgcttcatagtatataa 34446697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 6389743 - 6389805
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgt 375  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6389743 gacacggataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgt 6389805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 320 - 382
Target Start/End: Complemental strand, 17168515 - 17168453
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacac 382  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  17168515 ataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtcggtgtcggacac 17168453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 438
Target Start/End: Original strand, 26247433 - 26247551
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaatccaaga 419  Q
    |||||||||| ||||||||| ||| |||||| ||||||||| | |||||||||||||||||||| || | |||| ||||| | ||||  ||||||  ||     
T  26247433 ataataatttaagaaaatgacatattttagtataatcataggtttcgtgtcggtgtcggacaccaacacgtgtctgacaccgaacacacctaatctgagg 26247532  T
Q  420 agtgtccgtgcttcataga 438  Q
    |||||||||| ||||||||    
T  26247533 agtgtccgtgtttcataga 26247551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 366 - 434
Target Start/End: Complemental strand, 32978910 - 32978842
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttca 434  Q
    ||||||||||||||||| ||| |||||||||||| ||||||||||||||||||| |||||||||||||||    
T  32978910 gtgtcggtgtcggacac-gacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 4877991 - 4878061
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| ||| |||||||||||| ||||||| ||||||| || ||||||||||||||||||    
T  4877991 gtgtcggtgtcggacac-gacacatgtccgacacaggacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 313 - 434
Target Start/End: Complemental strand, 12235578 - 12235462
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtcta 411  Q
    |||||| ||||||||| |||||||||| |||||| ||||||||||||| ||||      ||||| ||||||||||  |||||| || ||||||||  |||    
T  12235578 gacacggataataattagagaaaatgacataattcagtgtaatcataggtgtc------gtgtccgacaccgacgtgtgtccggcaccgggacaccccta 12235485  T
Q  412 atccaagaagtgtccgtgcttca 434  Q
    |||||| ||||||||||||||||    
T  12235484 atccaaaaagtgtccgtgcttca 12235462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 19602233 - 19602177
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtc 376  Q
    ||||||||||||||||||||||||||| ||||||||||||| | | |||||||||||    
T  19602233 ataataatttgagaaaatgatataattcagtgtaatcataggtattgtgtcggtgtc 19602177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 30781353 - 30781290
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtc 376  Q
    ||||||| ||||||||||||||||||| |||||| | ||||||||||| |||| ||||||||||    
T  30781353 gacacgtgtaataatttgagaaaatgacataattaattgtaatcataggtgtcatgtcggtgtc 30781290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 365 - 437
Target Start/End: Complemental strand, 10339126 - 10339054
Alignment:
Q  365 cgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||||||||| ||| |||||||||||| |||||||| ||||||  || ||||||||||||||||||    
T  10339126 cgtgtcggtgtcggacac-gacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 78
Target Start/End: Original strand, 12696338 - 12696390
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||||| ||||||||||||| |||||||||| | |||||||||||||||||||    
T  12696338 tttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcgga 12696390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 16766711 - 16766775
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||||| |||| |||||||| |||||||||| | ||||| |||||||||||| ||||||||||||    
T  16766711 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaac 16766775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 18367891 - 18367966
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacacggg-acacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||| ||||| ||| |||||| |||||||| ||||| || ||||||| ||||||||||||||||||    
T  18367891 tgtcgtgtcggtgtcagacac-gacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 18367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 7625122 - 7625169
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatag 360  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  7625122 gacacggataataatttgagaaaatgatataatttagtataattatag 7625169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 12086404 - 12086345
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcgg 372  Q
    |||||| |||||||||||||| ||||| |||||| ||| ||||||||| |||||||||||    
T  12086404 gacacggataataatttgagataatgacataattcagtttaatcataggtgtcgtgtcgg 12086345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 2153946 - 2153884
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgt 375  Q
    |||||| | |||||||| ||||||||||||||||||||||||| |||| ||||| || |||||    
T  2153946 gacacgaacaataatttaagaaaatgatataatttagtgtaattataggtgtcgcgttggtgt 2153884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 392 - 437
Target Start/End: Original strand, 6389806 - 6389851
Alignment:
Q  392 tccgacacgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||    
T  6389806 tccgacacgggacactcctaatccgagaagtgtccgtgcttcatag 6389851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 7378060 - 7378105
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcatagaatataa 444  Q
    ||||||||| ||||||  ||||||||||||||||||||||||||||    
T  7378060 cgggacacggctaatctgagaagtgtccgtgcttcatagaatataa 7378105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 17327693 - 17327648
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||| |||||||||||||||| |||| |||||||||||||||||||    
T  17327693 aaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcgga 17327648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 314 - 437
Target Start/End: Complemental strand, 34895092 - 34894968
Alignment:
Q  314 acacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtc-gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtcta 411  Q
    |||| ||||||||||||||||||| ||| |||| ||||||||||||| |||| |||||  ||||||| ||  | || |||||||||| |||||||  |||    
T  34895092 acacctataataatttgagaaaattatacaattcagtgtaatcataggtgtcagtgtc-atgtcggaaactaatgcttgtccgacacagggacacaccta 34894994  T
Q  412 atccaagaagtgtccgtgcttcatag 437  Q
    ||   || ||||||||||||||||||    
T  34894993 atatgaggagtgtccgtgcttcatag 34894968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 6299519 - 6299567
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtg 368  Q
    ||||||||||||||||||||||||||| | |||||| |||| |||||||    
T  6299519 ataataatttgagaaaatgatataattcaatgtaatgataggtgtcgtg 6299567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 368
Target Start/End: Original strand, 6306329 - 6306377
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtg 368  Q
    ||||||||||||||||||||||||||| | |||||| |||| |||||||    
T  6306329 ataataatttgagaaaatgatataattcaatgtaatgataggtgtcgtg 6306377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 8365523 - 8365448
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||| |||||||| ||| | |||||||||| |||||||| ||||||| || ||| ||||||||||||||    
T  8365523 tgtcgtgtcggtatcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 90
Target Start/End: Complemental strand, 9107415 - 9107351
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||||| |||| ||| |||| |||||||||| | ||||| |||||||||||| ||||||||||||    
T  9107415 tttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaac 9107351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 327 - 437
Target Start/End: Complemental strand, 17327700 - 17327590
Alignment:
Q  327 tttgagaaaatgatataatttagtgtaatcatagatgtc-gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgt 424  Q
    ||||||||||| | ||||||||||||||  |||  |||| |||||| |||||||||| ||| | |||| ||||| |||||||| ||||||| || |||||    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcg-tgtcggacac-gacacgtgtctgacacagggacacgcctaatccgaggagtgt 17327603  T
Q  425 ccgtgcttcatag 437  Q
    |||||||||||||    
T  17327602 ccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 366
Target Start/End: Complemental strand, 28664733 - 28664698
Alignment:
Q  331 agaaaatgatataatttagtgtaatcatagatgtcg 366  Q
    |||||||||||| |||||||||||||||||||||||    
T  28664733 agaaaatgatatgatttagtgtaatcatagatgtcg 28664698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 9195792 - 9195738
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| ||||||||||||||||||||| ||||| ||||||||| || ||| |||||    
T  9195792 aaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacac 9195738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 9195805 - 9195771
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaat 355  Q
    ||||||||||||||||||| |||||||||||||||    
T  9195805 taataatttgagaaaatgacataatttagtgtaat 9195771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 21395342 - 21395292
Alignment:
Q  37 tacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||||||||||||||||| | ||||| |||||||||| | |||||||||    
T  21395342 tacataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 7973675 - 7973716
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    ||||||||||||| |||||||||||| ||||| |||||||||    
T  7973675 aaattacataattaagtgtaattataagtgtcggtgtcgtgt 7973716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 8714035 - 8714111
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||||||| | ||||| || ||||||  |||||||||||    
T  8714035 tgtcgtgtcggtgtcggaca-cgacacatttccgacatcgggacacgcccaatccgaggagtgtctttgcttcataga 8714111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 434
Target Start/End: Complemental strand, 9025493 - 9025448
Alignment:
Q  390 tgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttca 434  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||    
T  9025493 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 438
Target Start/End: Complemental strand, 9107374 - 9107298
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||||||||||||||||||| | |||  ||||||||| ||||||||  ||||||| || |||| ||||||||||||||    
T  9107374 tgtcgtgtcggtgtcggaca-caacgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcataga 9107298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 16766752 - 16766827
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatcc-aagaagtgtccgtgcttcatag 437  Q
    |||||||||||||||||||| | || | ||||||||| ||||||||| ||||||| ||||| ||||||||||||||||    
T  16766752 tgtcgtgtcggtgtcggaca-caacacgtgtccgacaccgggacacgcctaatccgaagaa-tgtccgtgcttcatag 16766827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 24832596 - 24832645
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtc 370  Q
    |||||||||||||||||  |||||||||||||||| |||  |||||||||    
T  24832596 taataatttgagaaaatcttataatttagtgtaattatatgtgtcgtgtc 24832645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 28715303 - 28715414
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaaga 419  Q
    ||||||||||| ||||||| |||||| |||||||| | |      ||||||||||||||||| ||| | ||| |||||| |||||||| ||||| | |||    
T  28715303 taataatttgaaaaaatgacataattcagtgtaattacaa-----gtgtcggtgtcggacac-gacacgtgttcgacaccgggacacgcctaattcgaga 28715396  T
Q  420 agtgtccgtgcttcatag 437  Q
    ||||| ||||||||||||    
T  28715397 agtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 31385011 - 31385048
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  31385011 cgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 34595182 - 34595254
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    ||||||||||||||||| ||| | |||| ||||| |||||||  ||||||| || |||||||||||||||||||    
T  34595182 gtgtcggtgtcggacac-gacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcataga 34595254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 7248440 - 7248488
Alignment:
Q  390 tgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| |||||||||| ||||| || ||||||||||||||||||    
T  7248440 tgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 10649371 - 10649407
Alignment:
Q  401 ggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||| |||||||||| ||||||||||||||||||    
T  10649371 ggacacgcctaatccaaggagtgtccgtgcttcatag 10649407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 13364754 - 13364718
Alignment:
Q  323 ataatttgagaaaatgatataatttagtgtaatcata 359  Q
    ||||||||||||||| |||||||| ||||||||||||    
T  13364754 ataatttgagaaaatcatataattcagtgtaatcata 13364718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 87
Target Start/End: Complemental strand, 16488614 - 16488574
Alignment:
Q  47 agtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  16488614 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 16488574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 28152146 - 28152217
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| ||| | |||||||||| |||||| | ||||||| || ||||| ||||||||||||    
T  28152146 gtgtcggtgtcggacac-gacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 31384934 - 31384982
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    |||||| |||| |||||||| |||||||||| | |||||||||||||||    
T  31384934 tttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt 31384982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 32313459 - 32313535
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||| ||||| |||| |||||| ||| ||||||||   ||| || |||| ||||||||||||||||    
T  32313459 tgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 32313535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 4e-49; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 313 - 428
Target Start/End: Original strand, 43554521 - 43554636
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaa 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  43554521 gacacgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggacaccgacgcgtgtccgacacgggacacgcctaa 43554620  T
Q  413 tccaagaagtgtccgt 428  Q
    ||| ||||||||||||    
T  43554621 tccgagaagtgtccgt 43554636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 33 - 256
Target Start/End: Complemental strand, 12264867 - 12264643
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaaccaggacacttgtaatcagagaagtgtatgcgcttataaaaat 132  Q
    ||||||||| ||| |||||||||||| |||||| |||| | |||| ||| || || |||  ||||| | ||||| || ||||||  | | |||  ||| |    
T  12264867 aaattacatgattcagtgtaattatatgtgtcaatgtcatatcggtgtcagatacgaccgagacacatctaatctgaaaagtgttcgagattacgaaatt 12264768  T
Q  133 gaatcatcaagtaattctacattacagttccagaatcaaactcaaaggaaaaacacgaagaacaatgacaatataaata-ttctaagcttttaacattgc 231  Q
    || ||||||||||||  ||||||||| |||||||||||||||||||||| |||||| ||| |||||| ||||||||||| || ||||||| ||||||||     
T  12264767 gagtcatcaagtaataatacattacaattccagaatcaaactcaaaggataaacacaaagcacaatggcaatataaatatttgtaagcttctaacattga 12264668  T
Q  232 atggtgttgatttgttgtagaaaaa 256  Q
    |||||||||||||||||||||||||    
T  12264667 atggtgttgatttgttgtagaaaaa 12264643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 329 - 433
Target Start/End: Complemental strand, 36577719 - 36577616
Alignment:
Q  329 tgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaatccaagaagtgtccgt 428  Q
    |||||||||||||||||||||| |||| |||  ||||||||||||||| |||||||| || | |||||||||||| ||| ||||||||||||||||| ||    
T  36577719 tgagaaaatgatataatttagtataattatatgtgtcgtgtcggtgtc-gacaccgatgcgtatccgacacgggatacgcctaatccaagaagtgtctgt 36577621  T
Q  429 gcttc 433  Q
    |||||    
T  36577620 gcttc 36577616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 327 - 437
Target Start/End: Complemental strand, 26205805 - 26205694
Alignment:
Q  327 tttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtc 425  Q
    ||||||||||||| |||||| ||||||||||||| |||||||| ||||||||||||| |||| | ||||||| ||||||||   |||||||| | |||||    
T  26205805 tttgagaaaatgacataattcagtgtaatcataggtgtcgtgttggtgtcggacaccaacgcgtatccgacaccgggacacacgtaatccaaaaggtgtc 26205706  T
Q  426 cgtgcttcatag 437  Q
    ||||||||||||    
T  26205705 cgtgcttcatag 26205694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 322 - 382
Target Start/End: Complemental strand, 39696049 - 39695989
Alignment:
Q  322 aataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacac 382  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||    
T  39696049 aataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtccgacac 39695989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 25863204 - 25863290
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    |||| ||||||||||||||||||||||||||||| |||||||| |||  ||||||||| ||||||| |||||| || |||| |||||    
T  25863204 gacatgtataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtcagtgtcgggcaccgatgcgtgtctgacac 25863290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 467 - 524
Target Start/End: Complemental strand, 12264587 - 12264530
Alignment:
Q  467 tgttcaagttaagattcttacaagattcaattgaaaaattcataggtcaaacattgca 524  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  12264587 tgttcaagttaaggttctttcaagattcaattgaaaaattcatatgtcaaacattgca 12264530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 17123097 - 17123166
Alignment:
Q  367 tgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||| |||||| ||  |||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  17123097 tgtcggtgttggacac-gaaacatgtccgacacgggacacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 39698555 - 39698616
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| |||| |||||||| |||||||||| | |||||||||||||||||| |||||||||    
T  39698555 tttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacac 39698616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 2577232 - 2577193
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcata 359  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  2577232 ataataatttgagaaaatgacataatttagtgtaatcata 2577193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 399
Target Start/End: Original strand, 21137697 - 21137773
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    ||||||| |||||||||||  ||||| |||| |||||||| ||||||||||  |||||||||| |||| ||||||||||    
T  21137697 taataatctgagaaaatgacgtaattcagtgaaatcataggtgtcgtgtcg--gtcggacaccaacgcgtgtccgacac 21137773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 42469221 - 42469268
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatag 360  Q
    |||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  42469221 gacacggataataatttgagaaaatgacatattttagtgtaatcatag 42469268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 372
Target Start/End: Complemental strand, 7997224 - 7997166
Alignment:
Q  314 acacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcgg 372  Q
    ||||| ||||||||||||||||||||||||||  |||||||| |||  |||||||||||    
T  7997224 acacggataataatttgagaaaatgatataatacagtgtaattataagtgtcgtgtcgg 7997166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 321 - 395
Target Start/End: Complemental strand, 14574100 - 14574027
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccg 395  Q
    |||||||||||  ||||||||||||| |||||||| |||| | ||||||| ||||||||| ||||||| ||||||    
T  14574100 taataatttgatgaaatgatataattcagtgtaattataggt-tcgtgtcagtgtcggacgccgacgcgtgtccg 14574027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 18592094 - 18592151
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    ||||||||||||| | |||||||||| ||| | |||||||||||| ||||||||||||    
T  18592094 aaattacataattcaatgtaattatatgtgccggtgtcgtgtcggtgtcggacacaac 18592151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 370
Target Start/End: Original strand, 31264446 - 31264495
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtc 370  Q
    ||||||||||||||||||| |||||| ||||||||||||  |||||||||    
T  31264446 taataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgtc 31264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 36838564 - 36838605
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    |||||||||||||||||||||||||| ||||| |||||||||    
T  36838564 aaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 5468030 - 5467974
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtc 376  Q
    |||||||||||| ||||| | |||||| |||||||| |||| |||||||||||||||    
T  5468030 ataataatttgataaaatcacataattcagtgtaattataggtgtcgtgtcggtgtc 5467974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 365
Target Start/End: Original strand, 12927662 - 12927706
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtc 365  Q
    ||||||||||||||||| ||||||||||||||||| ||| |||||    
T  12927662 taataatttgagaaaatcatataatttagtgtaattatatatgtc 12927706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 21522805 - 21522880
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||| ||| | |||||| ||| |||||||| |||||||||  ||||||||||| ||||||    
T  21522805 tgtcgtgtcggtgtcggacac-gacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21522880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 21533371 - 21533446
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||| ||| | |||||| ||| |||||||| |||||||||  ||||||||||| ||||||    
T  21533371 tgtcgtgtcggtgtcggacac-gacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatag 21533446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 43564929 - 43565000
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| |||   |||||||| | |||||||| ||||||| |||||||||||||||||||||    
T  43564929 gtgtcggtgtcggacac-gacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 375
Target Start/End: Complemental strand, 18607149 - 18607094
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgt 375  Q
    |||||||||||||||||| | |||||| | ||||||||||| ||||||||| ||||    
T  18607149 ataataatttgagaaaataacataattcaatgtaatcataggtgtcgtgtctgtgt 18607094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 436
Target Start/End: Original strand, 21542085 - 21542159
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    |||||||||||||||||||| |||| | ||||||||| ||||||||| | |||||||| | ||||||||| |||||    
T  21542085 tgtcgtgtcggtgtcggaca-cgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 30502439 - 30502330
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaaga 419  Q
    ||||||||||||||||| |  ||||| |||||||| |||      |||||||||||||||| |||| |||||||||||| |||||| | ||||||||||     
T  30502439 taataatttgagaaaatcacttaattcagtgtaattatat-----gtgtcggtgtcggaca-cgacacatgtccgacactgggacatgcctaatccaagg 30502346  T
Q  420 agtgtccgtgcttcat 435  Q
    | ||| ||||||||||    
T  30502345 attgttcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 30542782 - 30542673
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaaga 419  Q
    ||||||||||||||||| |  ||||| |||||||| |||      |||||||||||||||| |||| |||||||||||| |||||| | ||||||||||     
T  30542782 taataatttgagaaaatcacttaattcagtgtaattatat-----gtgtcggtgtcggaca-cgacacatgtccgacactgggacatgcctaatccaagg 30542689  T
Q  420 agtgtccgtgcttcat 435  Q
    | ||| ||||||||||    
T  30542688 attgttcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 19429508 - 19429546
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||| |||||||||||||||||||||| |||||||||||    
T  19429508 cgggtcacgtctaatccaagaagtgtctgtgcttcatag 19429546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 23290036 - 23289998
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  23290036 cgggacacgtctaatccaagcaatgtccgtgcttcatag 23289998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 3966524 - 3966581
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||| ||| |||| |||||||||||| ||||| |||||||||| | ||||||||||||    
T  3966524 aaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtcagtgtcggacacaac 3966581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Original strand, 21542056 - 21542105
Alignment:
Q  38 acataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||||| |||||||||| | ||||| |||||||||||| |||||||||    
T  21542056 acataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 21542105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 3966596 - 3966632
Alignment:
Q  400 gggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    |||||||||||||||| || |||||||||||||||||    
T  3966596 gggacacgtctaatccgaggagtgtccgtgcttcata 3966632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 7677760 - 7677835
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||| ||||| | | |||||||||||| |||||||| ||||||| || || ||| |||||||||||    
T  7677760 tgtcgtgtcggtgtctgacac-gtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatag 7677835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 11685966 - 11686013
Alignment:
Q  39 cataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||||||||||||||||| ||||| ||||||| |||| |||||||||    
T  11685966 cataatttagtgtaattatatgtgtcggtgtcgt-tcggtgtcggacac 11686013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 14873543 - 14873583
Alignment:
Q  38 acataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    ||||||||||||||||||||| ||||| ||||| |||||||    
T  14873543 acataatttagtgtaattatatgtgtcggtgtcatgtcgga 14873583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 21576756 - 21576685
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||| |||||||||| ||| | |||| ||||| |||||||| ||||||| || ||||||||||||||||||    
T  21576756 gtgtcgatgtcggacac-gacacgtgtctgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 21576685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 21814296 - 21814336
Alignment:
Q  47 agtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||||||||| ||||| |||||||||||| |||||||||    
T  21814296 agtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 21814336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 39698596 - 39698671
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacacgg-gacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||| |||   | |||||||| | |||||| ||||||| || ||||||||||||||||||    
T  39698596 tgtcgtgtcggtgtcggacac-gacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 5e-39; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 126 - 271
Target Start/End: Original strand, 39479790 - 39479936
Alignment:
Q  126 taaaaatgaatcatcaagtaattctacattacagttccagaatcaaactcaaaggaaaaacacgaagaacaatgacaatataaata-ttctaagctttta 224  Q
    ||||| ||||| |||||||||| ||||||||  |||||||||||||| |||||||| ||||||||||||||||||||||||||  | |||||||||| ||    
T  39479790 taaaactgaatgatcaagtaatgctacattaaggttccagaatcaaaatcaaaggataaacacgaagaacaatgacaatataagcatttctaagcttcta 39479889  T
Q  225 acattgcatggtgttgatttgttgtagaaaaagtcattaaaataaaa 271  Q
    |||||||||||||||||| |||||||||| ||| ||| |||||||||    
T  39479890 acattgcatggtgttgatctgttgtagaagaagacatgaaaataaaa 39479936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 320 - 436
Target Start/End: Complemental strand, 23354704 - 23354582
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtg------tcggacaccgacgcatgtccgacacgggacacgtctaat 413  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||      ||||||||||||   |||| ||||||||||||| |||||    
T  23354704 ataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggggtcggacaccgaccggtgtctgacacgggacacgcctaat 23354605  T
Q  414 ccaagaagtgtccgtgcttcata 436  Q
    || || |||||||||| ||||||    
T  23354604 ccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 23355047 - 23354926
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtc------ggacaccgacgcatgtccgacacgggacacgtctaat 413  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||      |||||||||| | |||| ||||||||||||| |||||    
T  23355047 ataataatttgagaaaatgatataatttagtgcaatcataggtgtcatgtcggtgtcggggttggacaccgacccgtgtctgacacgggacacgcctaat 23354948  T
Q  414 ccaagaagtgtccgtgcttcat 435  Q
    || || ||||||| ||||||||    
T  23354947 ccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 313 - 376
Target Start/End: Original strand, 25544481 - 25544544
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtc 376  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  25544481 gacacgtataataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtcggtgtc 25544544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 320 - 399
Target Start/End: Original strand, 24011043 - 24011122
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| || || || || ||||||||||    
T  24011043 ataataatttgagaaaatgacataatttagtgtaatcataggtgtcgcgtcggtgtctgatacggatgcgtgtccgacac 24011122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 320 - 401
Target Start/End: Original strand, 37986786 - 37986867
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgg 401  Q
    |||||||||||| ||||||||||| || ||||||||||||| | |||||| |||||||||||||||||  |||| |||||||    
T  37986786 ataataatttgaaaaaatgatatatttgagtgtaatcataggtatcgtgttggtgtcggacaccgacgagtgtctgacacgg 37986867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 320 - 414
Target Start/End: Original strand, 38919213 - 38919313
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtc------gtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaat 413  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||      |||||||||||||| || || || |||||||||| |||||||||||||    
T  38919213 ataataatttgagaaaatgttatagtttagtgtaatcataggtgtcgtgttagtgtcggtgtcggatactgatgcgtgtccgacacaggacacgtctaat 38919312  T
Q  414 c 414  Q
    |    
T  38919313 c 38919313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 452 - 566
Target Start/End: Original strand, 39479924 - 39480036
Alignment:
Q  452 catgaaaataaaatttgttcaagttaaga--ttcttacaagattcaattgaaaaattcataggtcaaacattgcatgcaatcgatccat-aatagattta 548  Q
    |||||||||||||||  ||||||||||||  |||||||| ||||||||||||| ||||||||||||||     | | ||||||||| || || |||||||    
T  39479924 catgaaaataaaattgtttcaagttaagagattcttacatgattcaattgaaagattcataggtcaaa-----cttacaatcgatcgataaacagattta 39480018  T
Q  549 tgaggtttaagtctctaa 566  Q
    |||||| |||||||||||    
T  39480019 tgaggtctaagtctctaa 39480036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 437
Target Start/End: Complemental strand, 11308053 - 11307934
Alignment:
Q  323 ataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtc------ggacaccgacgcatgtccgacacgggacacgtctaatcca 416  Q
    ||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||      |||||||||||| ||||||||||  || ||   ||||||     
T  11308053 ataatttgaaaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtcggtgttggacaccgacgcgtgtccgacac-cgaaacacttaatccg 11307955  T
Q  417 agaagtgtccgtgcttcatag 437  Q
    || ||||||||||||||||||    
T  11307954 aggagtgtccgtgcttcatag 11307934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 37419798 - 37419873
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||| || || |||||||||| |||||||| ||||||| || ||||||||||||||||||    
T  37419798 tgtcgtgtcggtgtcggacac-gatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 366 - 435
Target Start/End: Complemental strand, 2438730 - 2438661
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcat 435  Q
    ||||||||||||||||| ||| |||||||||||| |||||||| ||||||| || ||||||||||||||||    
T  2438730 gtgtcggtgtcggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 358
Target Start/End: Original strand, 22085004 - 22085049
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcat 358  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  22085004 gacacgtataataatttaagaaaatgacataatttagtgtaatcat 22085049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 367 - 437
Target Start/End: Original strand, 37497169 - 37497240
Alignment:
Q  367 tgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| ||||||||| ||||| || ||| |||||| | ||||||| |||||||||||||||||||||    
T  37497169 tgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcatag 37497240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 374
Target Start/End: Complemental strand, 10535811 - 10535757
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtg 374  Q
    |||||||||||||||||||| |||||| ||||||||||||  |||||||| ||||    
T  10535811 ataataatttgagaaaatgacataattcagtgtaatcataagtgtcgtgttggtg 10535757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 382
Target Start/End: Original strand, 19573985 - 19574047
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacac 382  Q
    |||||||||| ||||||| | |||||| |||||||| |||| || ||||||||||||||||||    
T  19573985 ataataatttaagaaaataacataattcagtgtaattataggtggcgtgtcggtgtcggacac 19574047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 437
Target Start/End: Complemental strand, 30717536 - 30717459
Alignment:
Q  360 gatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||| |||||||||| ||| | ||| |||||| |||| ||| |||||||||| ||||||||||||||||||    
T  30717536 gatgtcgtgtcgttgtcggacac-gacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 437
Target Start/End: Complemental strand, 34007043 - 34006930
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacggga-cacgtctaatccaag 418  Q
    |||||||||||||||| ||| |||||| |||||||||||||     |||||||||| ||||||| |  | |||| ||||| ||| |||  ||||| ||||    
T  34007043 ataataatttgagaaattgacataattcagtgtaatcatag-----gtgtcggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaag 34006949  T
Q  419 aagtgtccgtgcttcatag 437  Q
     ||||||||||||||||||    
T  34006948 gagtgtccgtgcttcatag 34006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 34785020 - 34784966
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||||  ||||||||    
T  34785020 aaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacac 34784966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 24009343 - 24009415
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacacggg-acacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    ||||||||||||||||| ||| | |||| |||||||| ||||| || ||||||| |||||||||||||||||||    
T  24009343 gtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcataga 24009415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 26769566 - 26769642
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||| ||||||| |||||||| ||| | |||||||||| |||||||| ||||||| || |||||||||||||||||||    
T  26769566 tgtcatgtcggtatcggacac-gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcataga 26769642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 12748691 - 12748743
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcgg 372  Q
    |||||||||||||||||||| ||| || ||||||||||||| ||| |||||||    
T  12748691 ataataatttgagaaaatgacatagttcagtgtaatcataggtgttgtgtcgg 12748743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 18841024 - 18840953
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||| ||||| ||| |||||||||||| |||||||  ||||||| || ||||||||||||||||||    
T  18841024 gtgtcggtgtcagacac-gacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 18889642 - 18889519
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcg------tgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaat 413  Q
    |||||| |||||||||| | |||||| ||||||||||||  |||||      |||  ||||||||||||||||||||||||||| | ||||||  ||||     
T  18889642 taataaattgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacccggacacacctaac 18889543  T
Q  414 ccaagaagtgtccgtgcttcatag 437  Q
    ||||| ||||||  ||||||||||    
T  18889542 ccaagtagtgtctctgcttcatag 18889519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 437
Target Start/End: Original strand, 21616828 - 21616864
Alignment:
Q  401 ggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||| |||||||||||||||||||||||||||||    
T  21616828 ggacacggctaatccaagaagtgtccgtgcttcatag 21616864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 35056923 - 35056998
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacacgg-gacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||||||||||| |||| | ||||||||||||  ||||| ||||||  || ||||||||||||||||||    
T  35056923 tgtcgtgtcggtgtcggaca-cgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatag 35056998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 12668468 - 12668417
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcgg 77  Q
    |||||| |||| |||||||| |||||||||||| ||||| ||||||||||||    
T  12668468 tttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcgg 12668417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 376
Target Start/End: Original strand, 30563409 - 30563472
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtc 376  Q
    |||||| |||||||||||||||||||| |||||| | |||||  |||| ||| |||||||||||    
T  30563409 gacacggataataatttgagaaaatgacataattcaatgtaactataggtgttgtgtcggtgtc 30563472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 35056896 - 35056943
Alignment:
Q  40 ataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| |||||||||||| ||||| |||||||||||| |||||||||    
T  35056896 ataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 35056943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 39399676 - 39399730
Alignment:
Q  154 ttacagttccagaatcaaactcaaaggaaaaacacgaagaacaatgacaatataaa 209  Q
    |||||||||||||| |||||  |||||| ||||| |||||||||||||||||||||    
T  39399676 ttacagttccagaagcaaacgtaaaggataaaca-gaagaacaatgacaatataaa 39399730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 30527646 - 30527612
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaat 355  Q
    ||||||||||||||||| |||||||||||||||||    
T  30527646 taataatttgagaaaatcatataatttagtgtaat 30527612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 36281693 - 36281731
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcata 359  Q
    ||||||||||||||||| | |||||||||||||||||||    
T  36281693 taataatttgagaaaatcacataatttagtgtaatcata 36281731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 437
Target Start/End: Original strand, 41849354 - 41849420
Alignment:
Q  372 gtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| |||| |||| || |||||| ||||| | ||| |||||||||||||||||    
T  41849354 gtgtcggacaccgacgcgtgtctgacaccgcgacacgcctaattctagaggtgtccgtgcttcatag 41849420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 13204046 - 13204091
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    ||||||||||||||| | ||| |||| |||||||||||||||||||    
T  13204046 aaattacataatttaatataactatatgtgtcagtgtcgtgtcgga 13204091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 15909670 - 15909629
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    ||||||||||||| |||||||||||| ||| |||||||||||    
T  15909670 aaattacataattcagtgtaattatatgtgacagtgtcgtgt 15909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 27286325 - 27286276
Alignment:
Q  38 acataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||||| ||||||||||||||||||| |||| |||||  |||||||||    
T  27286325 acataattaagtgtaattataggtgtcaatgtcatgtcgatgtcggacac 27286276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 8300264 - 8300232
Alignment:
Q  327 tttgagaaaatgatataatttagtgtaatcata 359  Q
    ||||||||||||| |||||||||||||||||||    
T  8300264 tttgagaaaatgacataatttagtgtaatcata 8300232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 32749863 - 32749811
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggac 85  Q
    |||| |||||||| |||||||| ||| |||||||||||||||||  |||||||    
T  32749863 aaatcacataattcagtgtaataataagtgtcagtgtcgtgtcgatgtcggac 32749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 36756389 - 36756341
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    |||||| |||| |||||||| |||||||||||| ||||| |||||||||    
T  36756389 tttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgt 36756341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 40361799 - 40361767
Alignment:
Q  26 tttgaataaattacataatttagtgtaattata 58  Q
    |||||| ||||||||||||||||||||||||||    
T  40361799 tttgaaaaaattacataatttagtgtaattata 40361767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 42511370 - 42511322
Alignment:
Q  390 tgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||||||    
T  42511370 tgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatag 42511322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 317 - 437
Target Start/End: Original strand, 39820433 - 39820547
Alignment:
Q  317 cgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaatcca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||      ||||||||||||| |||||||||||||||||| |||||||     
T  39820433 cgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgt------cggacaccgacgcgtgtccgacacgggacacgcctaatccg 39820526  T
Q  417 agaagtgtccgtgcttcatag 437  Q
    |||||||||||||||||||||    
T  39820527 agaagtgtccgtgcttcatag 39820547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 298 - 436
Target Start/End: Complemental strand, 13009566 - 13009423
Alignment:
Q  298 gaagcacggacaccggacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcg------gtgtcggacaccgacgcatg 391  Q
    ||||||||||||||| ||||| |||||||||||||||||  |||||||||||||||||||||  ||||||||||      ||||| ||||||||||| ||    
T  13009566 gaagcacggacaccg-acacggataataatttgagaaaacaatataatttagtgtaatcataagtgtcgtgtcggtgtaggtgtcagacaccgacgcctg 13009468  T
Q  392 tccgacacgggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    |||||||||||||||| |||||||||| || ||||||||||||||    
T  13009467 tccgacacgggacacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 320 - 437
Target Start/End: Complemental strand, 14513226 - 14513108
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaag 418  Q
    |||||||||||||||||| | |||||| || |||||||||||| | ||||||||||| ||||||||||||||||||||| ||| ||||  ||||||||||    
T  14513226 ataataatttgagaaaattacataattcagcgtaatcatagatttggtgtcggtgtcagacaccgacgcatgtccgacaccggaacacacctaatccaag 14513127  T
Q  419 aagtgtccgtgcttcatag 437  Q
    || |||| ||| |||||||    
T  14513126 aattgtctgtgattcatag 14513108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 294 - 378
Target Start/End: Original strand, 13845209 - 13845299
Alignment:
Q  294 ctatgaagcacggacaccg------gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcgg 378  Q
    |||||||||||||||||||      |||||  |||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||    
T  13845209 ctatgaagcacggacaccgaacaccgacacaaataataatttgagaaaatgatataatttagagtaatcataggtgtcgtgtctgtgtcgg 13845299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 302 - 439
Target Start/End: Original strand, 40063941 - 40064083
Alignment:
Q  302 cacggacaccggacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggaca-----ccgacgcatgtccga 396  Q
    ||||||||||| ||||  |||||||||||||||||||| |||||| | |||||||||||  ||||||||||||||  |||     ||||||  |||||||    
T  40063941 cacggacaccg-acaccaataataatttgagaaaatgacataattcattgtaatcataggcgtcgtgtcggtgtccaacacgtcgccgacgtgtgtccga 40064039  T
Q  397 ca-cgggacacgtctaatccaagaagtgtccgtgcttcatagaa 439  Q
    || |||||||| |||||||| || |||||||||||| |||||||    
T  40064040 caccgggacacatctaatccgaggagtgtccgtgctacatagaa 40064083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 8017493 - 8017559
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgac 386  Q
    |||||||| ||| ||||||| |||||| ||||||||||||||||||||||| |||| ||||||||||    
T  8017493 ataataatatgaaaaaatgacataattgagtgtaatcatagatgtcgtgtcagtgttggacaccgac 8017559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 436
Target Start/End: Original strand, 3658147 - 3658271
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacac-cgacgcatgtccgaca-cgggacacgtct 410  Q
    |||||| |||||||||||||||||| || || || ||||||||||||| |||||||| | |||||||||| || || |||||||||| |  |||||| ||    
T  3658147 gacacggataataatttgagaaaataatgtagttcagtgtaatcataggtgtcgtgttgatgtcggacacgcgtcg-atgtccgacatcaagacacgcct 3658245  T
Q  411 aatccaagaagtgtccgtgcttcata 436  Q
    ||| | || |||||||||||||||||    
T  3658246 aattcgaggagtgtccgtgcttcata 3658271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 22652031 - 22652106
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||| |||   |||||||||| |||||||||||||||| || ||||||||||||||||||    
T  22652031 tgtcgtgtcggtgtcggacac-gacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 320 - 372
Target Start/End: Complemental strand, 35431192 - 35431140
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcgg 372  Q
    |||||||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  35431192 ataataatttgagaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 35431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 313 - 435
Target Start/End: Original strand, 44067516 - 44067644
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcg-----gtgtcggacaccgacgcatgtccgaca-cgggacac 406  Q
    |||||| |||||||||||||||||||| |||||  |||||||| |||  ||||||||||     ||||||||||| || || ||||||||| | ||||||    
T  44067516 gacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcgtgtcggacactgatgcgtgtccgacaccaggacac 44067615  T
Q  407 gtctaatccaagaagtgtccgtgcttcat 435  Q
    | ||||| | || ||||||||||||||||    
T  44067616 gcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 1676712 - 1676771
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcgg 372  Q
    |||||| ||||||||||| |||||||| ||| |||||||||||||||| |||||||||||    
T  1676712 gacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 1676771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 321 - 433
Target Start/End: Complemental strand, 12559157 - 12559044
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcata-gatgtcgtgtcggtgtcggacaccgacgcatgtccgac-acgggacacgtctaatccaag 418  Q
    |||||||||||||||||||||||||| |||||||||||| |   | |||||  | |||||||||||| | |||||||| ||||||||| |||||||| ||    
T  12559157 taataatttgagaaaatgatataattcagtgtaatcatatgtattggtgtc-atctcggacaccgacacgtgtccgacaacgggacacatctaatcccag 12559059  T
Q  419 aagtgtccgtgcttc 433  Q
     |||||| |||||||    
T  12559058 gagtgtctgtgcttc 12559044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 15816174 - 15816113
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| |||| ||||||||||||||||||||| ||||| ||||||||| || |||||||||    
T  15816174 tttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacac 15816113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 382
Target Start/End: Complemental strand, 26915299 - 26915230
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacac 382  Q
    |||||| |||| | ||||||||||||| |||||||| |||||||| |  |||||||||||||||||||||    
T  26915299 gacacggataaaattttgagaaaatgacataatttaatgtaatcacaagtgtcgtgtcggtgtcggacac 26915230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 15816180 - 15816058
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcata------gatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaat 413  Q
    ||||||||||| ||||| | ||||||||||||||| |||      | |||||||| |||||||||||| ||| |   |||||||| |||||||| |||||    
T  15816180 taataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacac-gacacgaatccgacaccgggacacgcctaat 15816082  T
Q  414 ccaagaagtgtccgtgcttcatag 437  Q
    || |||||||||||||||||||||    
T  15816081 ccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 17751703 - 17751775
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| |||||||  |||||| ||||||||| ||||||| || |||||||| |||||||||    
T  17751703 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 17760690 - 17760762
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| |||||||  |||||| ||||||||| ||||||| || |||||||| |||||||||    
T  17760690 gtgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 24413570 - 24413499
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||| ||||||||||| || || ||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  24413570 gtgtcagtgtcggacac-gatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcatag 24413499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 29510304 - 29510233
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| ||||| |||||||||| |||||||  ||||||| || ||||||||||||||||||    
T  29510304 gtgtcggtgtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 34451036 - 34450961
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacacggg-acacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||| ||| | |||| |||||||| ||||| || ||||||| ||||||||||||||||||    
T  34451036 tgtcgtgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 304 - 437
Target Start/End: Complemental strand, 30068096 - 30067968
Alignment:
Q  304 cggacaccggacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-ggg 402  Q
    ||||||| ||||||| |||||||||||||||||||| |||||| ||| ||||| ||| ||      | | |||||| |||||||  |||||||||| |||    
T  30068096 cggacactggacacggataataatttgagaaaatgacataattcagtataatcgtaggtg------ccgagtcggataccgacgtgtgtccgacactggg 30068003  T
Q  403 acacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||  ||||||| |  ||||||||||||||||||    
T  30068002 acacacctaatccgatgagtgtccgtgcttcatag 30067968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 437
Target Start/End: Original strand, 28745551 - 28745628
Alignment:
Q  360 gatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgg-gacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||||| ||| | |||||| ||| | |||| ||||||| |||| ||||||||||||||||||    
T  28745551 gatgtcgtgtcggtgtcggacac-gacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcatag 28745628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 2572101 - 2572040
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| |||| ||||||||||||||||||| | ||||| |||||||||| | |||||||||    
T  2572101 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacac 2572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 33405435 - 33405324
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacg-ggacacgtctaatccaaga 419  Q
    ||||||||||||||||  | ||||||||||||||| |||      ||||||||||||||||| ||| |||||| |||||  ||||||| |||||||||      
T  33405435 taataatttgagaaaaacacataatttagtgtaattatat-----gtgtcggtgtcggacac-gacacatgtctgacacctggacacggctaatccaatg 33405342  T
Q  420 agtgtccgtgcttcatag 437  Q
    |||||||||||| |||||    
T  33405341 agtgtccgtgctccatag 33405324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 3025559 - 3025668
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaaga 419  Q
    ||||||||||||||||| | |||||| |||||||| ||||     ||||| |||||||||| |||| | |||| ||||| | |||||| ||||||| ||     
T  3025559 taataatttgagaaaatcacataattcagtgtaattatag-----gtgtcagtgtcggaca-cgacacgtgtctgacactgtgacacggctaatccgagg 3025652  T
Q  420 agtgtccgtgcttcat 435  Q
    ||||||||||||||||    
T  3025653 agtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 383 - 437
Target Start/End: Original strand, 11803334 - 11803389
Alignment:
Q  383 cgacgcatgtccgacacggg-acacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||| |||||||||||| || ||||||||||||| || ||||||||||||||||||    
T  11803334 cgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 370
Target Start/End: Complemental strand, 28883935 - 28883880
Alignment:
Q  315 cacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtc 370  Q
    |||| |||||||||||||||||||| |||||| |||| |||||||| |||| ||||    
T  28883935 cacgaataataatttgagaaaatgacataattcagtggaatcataggtgtcttgtc 28883880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 3025572 - 3025610
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcg 71  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  3025572 aaatcacataattcagtgtaattataggtgtcagtgtcg 3025610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 26 - 72
Target Start/End: Original strand, 8343330 - 8343376
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgt 72  Q
    |||||| |||| ||||||||||||||||||| | |||||||||||||    
T  8343330 tttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgt 8343376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 27213606 - 27213644
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  27213606 cgggacacggctaatccgagaagtgtccgtgcttcatag 27213644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 437
Target Start/End: Complemental strand, 4673418 - 4673354
Alignment:
Q  373 tgtcggacaccgacgcatgtccgacacggga-cacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| ||||||| |||||||| ||| |||| |||||||||| |||||| |||||||||||    
T  4673418 tgtcggacac-gacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 437
Target Start/End: Original strand, 9383044 - 9383085
Alignment:
Q  396 acacgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||| ||||||| |||||||||| ||||||||||||||||||    
T  9383044 acacaggacacgcctaatccaagcagtgtccgtgcttcatag 9383085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 12985392 - 12985445
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcg 366  Q
    ||||| ||||||||||||||||||| | |||||| | |||||||||| ||||||    
T  12985392 gacacctataataatttgagaaaatcacataattcaatgtaatcatatatgtcg 12985445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 437
Target Start/End: Original strand, 13397617 - 13397670
Alignment:
Q  385 acgcatgtccgacacgg-gacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||| | |||||| ||||| |||| ||||||||||||||||||    
T  13397617 acgcatgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 27101529 - 27101573
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcg 71  Q
    |||||| |||| ||||||||||||| ||||||||||||||||||||    
T  27101529 tttgaaaaaatcacataatttagtg-aattataggtgtcagtgtcg 27101573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 29447499 - 29447575
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    ||||||||||||||| ||||| |||   |||||||||| |||||| ||||||||  || |||||||||||||||||||    
T  29447499 tgtcgtgtcggtgtcagacac-gacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcataga 29447575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Complemental strand, 31586329 - 31586292
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatca 357  Q
    |||||||||||||||||||||||||| || ||||||||    
T  31586329 ataataatttgagaaaatgatataatataatgtaatca 31586292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 3951547 - 3951476
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacacggga-cacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||| ||||| ||| | |||| ||||||||| |||| |||||||||| ||| ||||||||||||||    
T  3951547 gtgtcggtgtcagacac-gacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatag 3951476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 16867238 - 16867202
Alignment:
Q  38 acataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  16867238 acataatttagtgtaattataagtgtcggtgtcgtgt 16867202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 36450765 - 36450694
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacacg-ggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||| |||||||||||| ||||| ||||||||||  ||||||| ||||||| || |||||| |||||||||||    
T  36450765 gtgtaggtgtcggacac-gacgcgtgtccgacaccaggacacgcctaatccgaggagtgtctgtgcttcatag 36450694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 8e-38; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 314 - 438
Target Start/End: Complemental strand, 3144710 - 3144586
Alignment:
Q  314 acacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaat 413  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||||| ||||| |||||  |||||    
T  3144710 acacggataataatttcagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcagacaccaacgcgtgtccaacacgagacacacctaat 3144611  T
Q  414 ccaagaagtgtccgtgcttcataga 438  Q
    || ||||||||||||||||||||||    
T  3144610 ccgagaagtgtccgtgcttcataga 3144586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 24343507 - 24343633
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtcta 411  Q
    |||||| |||||||||||||||||| | |||||| |||||||| |||| ||||||||||||||| ||||||||||| ||||||||| ||||||||| |||    
T  24343507 gacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgccta 24343606  T
Q  412 atccaagaagtgtccgtgcttcataga 438  Q
     ||  || |||||||||||||||||||    
T  24343607 ttctgaggagtgtccgtgcttcataga 24343633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 433
Target Start/End: Complemental strand, 20743337 - 20743210
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcg------gacaccgacgcatgtccgaca-cgggaca 405  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||||| ||| ||||||||||||      ||||||||| | ||||||||| ||| |||    
T  20743337 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcgatgtcagacaccgacacgtgtccgacaccggaaca 20743238  T
Q  406 cgtctaatccaagaagtgtccgtgcttc 433  Q
    | |||||||| |  ||||||||||||||    
T  20743237 catctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 413
Target Start/End: Original strand, 6273953 - 6274050
Alignment:
Q  322 aataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcg------gacaccgacgcatgtccgacacgggacacgtctaat 413  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||||||||||||      |||| |||||||||||||||||  |||||| |||||    
T  6273953 aataatttgagaaaatgatataatttagtgtaattatagtcgtcgtgtcggtgtcggtgtcagacatcgacgcatgtccgacacaagacacgcctaat 6274050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 333 - 437
Target Start/End: Original strand, 23386166 - 23386277
Alignment:
Q  333 aaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacacc-------gacgcatgtccgacacgggacacgtctaatccaagaagtgtc 425  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||||       || || ||||||||| |||||| | ||||||  || ||||||    
T  23386166 aaaatgatataatttagtgtaatcataggtgtcatgtcggtgtcggacaccaatgtgtgatgcgtgtccgacaagggacatgcctaatcagaggagtgtc 23386265  T
Q  426 cgtgcttcatag 437  Q
    ||||||||||||    
T  23386266 cgtgcttcatag 23386277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 320 - 437
Target Start/End: Complemental strand, 53381644 - 53381530
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaag 418  Q
    |||||||||| |||||||||    ||| |||||||| ||||  |||||||||||||||||||| ||||| | ||||||| ||||||||  ||||||| ||    
T  53381644 ataataatttaagaaaatga----attcagtgtaattataggcgtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgag 53381549  T
Q  419 aagtgtccgtgcttcatag 437  Q
     ||||||||||||||||||    
T  53381548 gagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 324 - 437
Target Start/End: Original strand, 17876166 - 17876285
Alignment:
Q  324 taatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcg-----gacaccgacgcatgtccgaca-cgggacacgtctaatccaa 417  Q
    |||||| ||||||||| |||||||||||||||||||  || |||||| ||||||     ||||||||||| ||||||||| | ||||||  |||||||||    
T  17876166 taattttagaaaatgacataatttagtgtaatcatatgtgccgtgtcagtgtcgtgtcagacaccgacgcttgtccgacaccaggacacacctaatccaa 17876265  T
Q  418 gaagtgtccgtgcttcatag 437  Q
    | |||||| |||||||||||    
T  17876266 ggagtgtctgtgcttcatag 17876285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 320 - 437
Target Start/End: Complemental strand, 18513293 - 18513175
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtc-gtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaa 417  Q
    |||||||||||||||||||| |||||| | ||||||||||  |||| ||||  ||||||||||||||||  ||||||||| | ||||||| ||||||  |    
T  18513293 ataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgt-tgtgtcggacaccgacgtgtgtccgacaccaggacacgcctaatctga 18513195  T
Q  418 gaagtgtccgtgcttcatag 437  Q
    | ||||||||||||||||||    
T  18513194 ggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 31243607 - 31243545
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgt 375  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||    
T  31243607 gacacttataataatttgagaaaatgacataattcagtgtaatcataggtgtcatgtcggtgt 31243545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 438
Target Start/End: Complemental strand, 34515933 - 34515810
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaa 412  Q
    |||||| |||||||||  ||||||||| |||||| ||||||| ||||| |||| ||| | |||| || ||   || ||||||||||||||||||||||||    
T  34515933 gacacggataataattcaagaaaatgacataattcagtgtaaacataggtgtcatgttg-tgtcagatacat-cgaatgtccgacacgggacacgtctaa 34515836  T
Q  413 tccaagaagtgtccgtgcttcataga 438  Q
    |||||| |||||| ||| ||||||||    
T  34515835 tccaaggagtgtctgtgattcataga 34515810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 437
Target Start/End: Complemental strand, 20521901 - 20521785
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaag 418  Q
    |||||||||||| ||||| | |||||| | || ||||||   ||||||||||||||||||||||||||||||||||| | |  |||||| ||||||||||    
T  20521901 ataataatttgataaaatcacataattcaatgaaatcatg--tgtcgtgtcggtgtcggacaccgacgcatgtccgaaaccatgacacgcctaatccaag 20521804  T
Q  419 aagtgtccgtgcttcatag 437  Q
     ||  |||| |||||||||    
T  20521803 gagaatccgagcttcatag 20521785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 322 - 360
Target Start/End: Complemental strand, 49659573 - 49659535
Alignment:
Q  322 aataatttgagaaaatgatataatttagtgtaatcatag 360  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49659573 aataatttgagaaaatgatataatttagtgtaatcatag 49659535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 320 - 437
Target Start/End: Original strand, 7012073 - 7012197
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcata------gatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaa 412  Q
    |||||||||||||||||||| |||||| ||||| ||||||      | ||| ||||||||||||||||||||||| | ||||||| ||||  ||  ||||    
T  7012073 ataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggacaccgacgcgtatccgacaccggggaacacctaa 7012172  T
Q  413 tccaagaagtgtccgtgcttcatag 437  Q
    | | || ||||||||||||||||||    
T  7012173 tgcgaggagtgtccgtgcttcatag 7012197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 391 - 447
Target Start/End: Original strand, 37203324 - 37203381
Alignment:
Q  391 gtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatagaatataacaa 447  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||    
T  37203324 gtccgacaccgggacacgtctaatccgagaagtgtccgtgcttcatagatcataacaa 37203381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 399
Target Start/End: Complemental strand, 944717 - 944641
Alignment:
Q  323 ataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    ||||||||||| |||||   ||||||||||||| |||| ||||||||| |||||| |||| ||||| ||||||||||    
T  944717 ataatttgagataatgacgcaatttagtgtaattataggtgtcgtgtcagtgtcgaacacagacgcgtgtccgacac 944641  T

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Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 23292997 - 23292926
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| ||| | |||||||||| |||||||| ||||||| || ||||||||||||||||||    
T  23292997 gtgtcggtgtcggacac-gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 360 - 438
Target Start/End: Original strand, 11931333 - 11931411
Alignment:
Q  360 gatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||||| ||||||| ||| |||||||||||||||||||| | ||||||  |||||||| | |||||||||||||||||||    
T  11931333 gatgtcatgtcggtatcg-acaccgacgcatgtccgacaccaggacacacctaatccatggagtgtccgtgcttcataga 11931411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 362 - 436
Target Start/End: Complemental strand, 30982882 - 30982808
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    ||||||||||||||| ||||| ||| | |||||||||| |||||||| |||||||||  |||||||||||||||||    
T  30982882 tgtcgtgtcggtgtcagacac-gacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 438
Target Start/End: Complemental strand, 19230361 - 19230240
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtc--gtgtcggtgtcggacaccgacgcatgtccgac-acgggacacgtctaatcca 416  Q
    |||||||||||||||||| | |||||| | |||||| |||| ||||  ||||||||||| ||||| || || ||| |||| || |||||| ||||||||     
T  19230361 ataataatttgagaaaataacataattcaatgtaattataggtgtcgtgtgtcggtgtcagacacggatgcgtgttcgacaacaggacacatctaatccg 19230262  T
Q  417 agaagtgtccgtgcttcataga 438  Q
    |  ||||||||| |||||||||    
T  19230261 aagagtgtccgtacttcataga 19230240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 51701272 - 51701333
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| ||||||||||||| |||||||||| | |||| ||||||||||||| |||| ||||    
T  51701272 tttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaacac 51701333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 320 - 373
Target Start/End: Original strand, 53968553 - 53968606
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggt 373  Q
    |||||||||| ||||||||| |||||| ||||  ||||||||||||||||||||    
T  53968553 ataataatttaagaaaatgacataattcagtgatatcatagatgtcgtgtcggt 53968606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 715600 - 715544
Alignment:
Q  383 cgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||| |||||||||||| |||||||| ||||||| || |||||||||||||||||||    
T  715600 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 715544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 752926 - 752870
Alignment:
Q  383 cgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||| |||||||||||| |||||||| ||||||| || |||||||||||||||||||    
T  752926 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 752870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 10499308 - 10499270
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcg 71  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  10499308 aaatcacataatttagtgtaattatatgtgtcagtgtcg 10499270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 30299010 - 30299048
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  30299010 cgggacacgtctaatccgaggagtgtccgtgcttcatag 30299048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Original strand, 30327878 - 30327916
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  30327878 cgggacacgtctaatccgaggagtgtccgtgcttcatag 30327916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 355
Target Start/End: Original strand, 32910551 - 32910593
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaat 355  Q
    |||||| |||||||||||||||||||| |||||| ||||||||    
T  32910551 gacacggataataatttgagaaaatgacataattcagtgtaat 32910593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 302 - 356
Target Start/End: Complemental strand, 47191062 - 47191009
Alignment:
Q  302 cacggacaccggacacgtataataatttgagaaaatgatataatttagtgtaatc 356  Q
    ||||||||||| ||| | ||||||||||| |||||||| ||||||||||||||||    
T  47191062 cacggacaccg-acatggataataatttgcgaaaatgacataatttagtgtaatc 47191009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 2362020 - 2361975
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcg 71  Q
    |||||| |||||||||||||||||||||||| | ||||| ||||||    
T  2362020 tttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtcg 2361975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 13134471 - 13134528
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||| ||||||||||||||||||||| |||||  ||||||||||  |||| |||||||    
T  13134471 aaatcacataatttagtgtaattatatgtgtcgatgtcgtgtcgacgtcgaacacaac 13134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 357
Target Start/End: Original strand, 20119952 - 20119989
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatca 357  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  20119952 ataataatttgagaaaatgaaataatttaatgtaatca 20119989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 35158036 - 35157925
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacggga-cacgtctaatccaaga 419  Q
    ||||||||||  ||||| | ||||||||||||||| |||      ||||||||||| ||||| ||| ||||||| |||| ||| ||||  |||||| |||    
T  35158036 taataatttggaaaaatcacataatttagtgtaattataa-----gtgtcggtgtctgacac-gacacatgtccaacaccggaacacgcttaatccgaga 35157943  T
Q  420 agtgtccgtgcttcatag 437  Q
    ||||||||||||||||||    
T  35157942 agtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 36409545 - 36409512
Alignment:
Q  38 acataatttagtgtaattataggtgtcagtgtcg 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  36409545 acataatttagtgtaattataggtgtcggtgtcg 36409512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 36423711 - 36423678
Alignment:
Q  38 acataatttagtgtaattataggtgtcagtgtcg 71  Q
    ||||||||||||||||||||||||||| ||||||    
T  36423711 acataatttagtgtaattataggtgtcggtgtcg 36423678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 904004 - 904052
Alignment:
Q  390 tgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  904004 tgtccgacactgggacacatctaatccaagaaatgtccttgcttcatag 904052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 3947811 - 3947759
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||||| ||||  ||||||| |||||||||| | |||||||||||||||||||    
T  3947811 tttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcgga 3947759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 5414176 - 5414101
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||| ||||||||||| ||| | |||| ||||| |||||||  || ||||||| ||||||||||||||||||    
T  5414176 tgtcgtgtcagtgtcggacac-gacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcatag 5414101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 18844459 - 18844423
Alignment:
Q  401 ggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  18844459 ggacacgcctaatccgagaagtgtccgtgcttcatag 18844423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 22234894 - 22234819
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacacg-ggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||| ||||| ||| | ||||||||||  ||||||  ||||||| |||||||| ||||||||||||    
T  22234894 tgtcgtgtcggtgtctgacac-gacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 24613666 - 24613630
Alignment:
Q  401 ggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||| || ||||||||||||||||||    
T  24613666 ggacacgtctaatcctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 438
Target Start/End: Original strand, 29205532 - 29205588
Alignment:
Q  383 cgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||| |||||||||||| |||||||| ||||||| || ||||| |||||||||||||    
T  29205532 cgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcataga 29205588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 30838231 - 30838283
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggac 85  Q
    |||||| ||||||||||||||||||| || || |||||||||| | |||||||    
T  30838231 aaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggac 30838283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 39507171 - 39507131
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatag 360  Q
    ||||||||||  ||||||||||||||| |||||||||||||    
T  39507171 ataataatttatgaaaatgatataattaagtgtaatcatag 39507131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 356
Target Start/End: Complemental strand, 50848355 - 50848319
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatc 356  Q
    |||||||||||| |||||||||||||| |||||||||    
T  50848355 ataataatttgaaaaaatgatataattcagtgtaatc 50848319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 2e-35; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 42005006 - 42004882
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaa 412  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||   ||||| ||||    
T  42005006 gacacggataataatttgagaaaatgacataatttagtgtaatcataggtgttgtgtcggtgtcggacaccgacgcatgtccgacactaaacacgcctaa 42004907  T
Q  413 tccaagaagtgtccgtgcttcatag 437  Q
    | | |  ||||||||||||||||||    
T  42004906 ttcgaagagtgtccgtgcttcatag 42004882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 314 - 399
Target Start/End: Complemental strand, 6936458 - 6936373
Alignment:
Q  314 acacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    ||||| |||||||| ||||||||||| |||||| ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  6936458 acacggataataatctgagaaaatgacataattaagtgtaatcataggtgtcgtgtctgtgtcggacaccgacgcatatccgacac 6936373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 40747832 - 40747707
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtcta 411  Q
    |||||| |||||||||||||||||||| |||||| | |||||| |||| |||| ||| |||||||||||||||  ||||||| |||| |||||||  |||    
T  40747832 gacacggataataatttgagaaaatgacataattcaatgtaattataggtgtcatgttggtgtcggacaccgatccatgtcccacacagggacaccccta 40747733  T
Q  412 atccaagaagtgtccgtgcttcatag 437  Q
    |||| || || |||||||||||||||    
T  40747732 atccgaggagcgtccgtgcttcatag 40747707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 308 - 432
Target Start/End: Complemental strand, 351147 - 351023
Alignment:
Q  308 caccggacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacac 406  Q
    ||||||||||| |||||||||||| ||||| | |||||| | || |||||||  | |||||||| |||  ||||||||||||||| | ||| ||||||||    
T  351147 caccggacacg-ataataatttgataaaatcacataattcaatggaatcatatgtatcgtgtcgctgttagacaccgacgcatgttcaacaccgggacac 351049  T
Q  407 gtctaatccaagaagtgtccgtgctt 432  Q
    | |||||||||| |||||||| ||||    
T  351048 gcctaatccaaggagtgtccgagctt 351023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 23440010 - 23440051
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaa 354  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23440010 gacacgtataataatttgagaaaatgatataatttagtgtaa 23440051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 32461464 - 32461393
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| ||| | |||| ||||| |||||||| |||||||||||||||||||||||||||||    
T  32461464 gtgtcggtgtcggacac-gacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 47989552 - 47989627
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||| ||| |||||| |||| ||||||||| ||||||| || ||||||||||||||||||    
T  47989552 tgtcgtgtcggtgtcggacac-gacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 371
Target Start/End: Original strand, 6573981 - 6574047
Alignment:
Q  304 cggacaccggacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcg 371  Q
    ||||||||| ||||| || ||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  6573981 cggacaccg-acacggatgataatttgagacaatgatataatttagtgtaatcataggtgttgtgtcg 6574047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 432
Target Start/End: Complemental strand, 9629904 - 9629834
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgctt 432  Q
    |||||||||| |||||||||| ||| |||||||||||| |||||||||||  ||||||||||||||||||||    
T  9629904 tgtcgtgtcgatgtcggacac-gacacatgtccgacaccgggacacgtctcgtccaagaagtgtccgtgctt 9629834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 25361907 - 25361961
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| |||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  25361907 aaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacac 25361961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 32899938 - 32900011
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||||||||||||||||||||||||||| |||| ||||||||  ||||||| || | ||||| |||||||||||    
T  32899938 gtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcataga 32900011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 34712421 - 34712376
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  34712421 aaataacataatttagtgtaattatatgtgtcagtgtcgtgtcgga 34712376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 369
Target Start/End: Complemental strand, 48415785 - 48415728
Alignment:
Q  313 gacacgtataataatttgagaaaa-tgatataatttagtgtaatcatagatgtcgtgt 369  Q
    |||||| |||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  48415785 gacacggataataattttaaaaaaatgatataatttagtgtaatcatagatgtcgtgt 48415728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 9828099 - 9828174
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||| ||||| ||||| ||| | |||||||||| |||||||||||||||| || ||||||||||||||||||    
T  9828099 tgtcgtgtccgtgtcagacac-gacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 17754325 - 17754389
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||||| ||||||||||||| ||||||| |||| |||||||||| ||||||| || |||||||||    
T  17754325 tttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaac 17754389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 321 - 438
Target Start/End: Complemental strand, 34712434 - 34712322
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtc-gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaag 418  Q
    ||||||||||||||||| | ||||||||||||||| |||  |||| |||||| ||||||||||       ||||| |||| |||||||||||||| ||||    
T  34712434 taataatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcg-tgtcggacacg------tgtcctacactgggacacgtctaattcaag 34712342  T
Q  419 aagtgtccgtgcttcataga 438  Q
     |||||||||||||||||||    
T  34712341 gagtgtccgtgcttcataga 34712322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 438
Target Start/End: Complemental strand, 17831582 - 17831461
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcata---gatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatcca 416  Q
    ||||||||||||||||| | || ||| ||||||||||||   |  |||||||| |||||||||||||||   ||||||||| ||||||||| ||||||      
T  17831582 taataatttgagaaaatcacattattcagtgtaatcatatgtgtcgtcgtgtcagtgtcggacaccgacatgtgtccgacaccgggacacgcctaatctt 17831483  T
Q  417 agaagtgtccgtgcttcataga 438  Q
    || ||||||| || ||||||||    
T  17831482 aggagtgtccatgtttcataga 17831461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 21038104 - 21038158
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    ||||||||||||| |||||||| ||| | |||||||||||||||| |||||||||    
T  21038104 aaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcggtgtcggacac 21038158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 313 - 375
Target Start/End: Complemental strand, 39101241 - 39101179
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgt 375  Q
    ||||| ||||||||||||||||||| | |||||| |||||||| |||| |||||| |||||||    
T  39101241 gacacatataataatttgagaaaataacataattaagtgtaattataggtgtcgtttcggtgt 39101179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 44482251 - 44482305
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| |||||||| |||||||||||| ||||| |||||||||||| |||||||||    
T  44482251 aaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacac 44482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 6612216 - 6612155
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| ||||||||||||| |||||||||| | ||||| |||||||||||  |||||||||    
T  6612216 tttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacac 6612155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 437
Target Start/End: Complemental strand, 22515938 - 22515827
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgg-gacacgtctaatccaaga 419  Q
    ||||||||||| ||||| | ||||||||||||||| | |      ||||||||||||||||| ||| ||| |||||||| | |||||| ||||||| ||     
T  22515938 taataatttgaaaaaatcacataatttagtgtaattacaa-----gtgtcggtgtcggacac-gacacatatccgacaccgagacacgcctaatccgagg 22515845  T
Q  420 agtgtccgtgcttcatag 437  Q
    ||||||||||||||||||    
T  22515844 agtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 1486760 - 1486646
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtc-gtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaag 418  Q
    ||||||||||| ||||| | |||||| |||||||| |||  |||| ||||| |||||||||| |||| | ||||||||| ||||||||| ||||||| ||    
T  1486760 taataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc-gtgtcggaca-cgacacgtgtccgacaccgggacacgcctaatccgag 1486663  T
Q  419 aagtgtccgtgcttcat 435  Q
     |||||| |||||||||    
T  1486662 gagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 1486754 - 1486702
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||||| |||| |||||||| |||||||||||| ||||| |||||||||||||    
T  1486754 tttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgga 1486702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 18556460 - 18556385
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||| ||||||| ||| ||||| | | |||||||| |||||||| ||||||| |||||||||||||||||||||    
T  18556460 tgtcgtgacggtgtcagac-ccgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 37598879 - 37598950
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| ||| | |||||||||  |||||||| ||||||| || ||||||||||||||||||    
T  37598879 gtgtcggtgtcggacac-gacacgtgtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 40917804 - 40917879
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||||| |||||| ||| | |||||||||| |||||||| ||||||| || | ||||||||||||||||    
T  40917804 tgtcgtgtcggtgttggacac-gacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 406
Target Start/End: Original strand, 43328467 - 43328566
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatca------tagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacac 406  Q
    ||||| ||||||||||||||||||||| |||||||| ||||| ||      |   |||||||| |||||||||||||||| |||||| |||||| |||||    
T  43328467 gacacttataataatttgagaaaatgaaataatttaatgtaaccacatgtgtcattgtcgtgttggtgtcggacaccgactcatgtcggacacgagacac 43328566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 399
Target Start/End: Complemental strand, 20157401 - 20157323
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtc-gtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    ||||||| ||||||||| | |||||| ||||||||||||  |||| ||||| ||||| ||||||||||| ||||||||||    
T  20157401 taataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc-gtgtccgacaccgacgcgtgtccgacac 20157323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 34741918 - 34741965
Alignment:
Q  390 tgtccgacacgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||||||||| ||||||| |  ||||||||||||||||||    
T  34741918 tgtccgacacgggacacgcctaatccgaagagtgtccgtgcttcatag 34741965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 48450597 - 48450550
Alignment:
Q  390 tgtccgacacgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||| ||||| ||||||||||||||| || ||||||||||||||||||    
T  48450597 tgtcggacacaggacacgtctaatccgaggagtgtccgtgcttcatag 48450550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 7918249 - 7918207
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtc 75  Q
    |||| |||||||| |||||||||||| ||||||||||||||||    
T  7918249 aaatcacataattcagtgtaattatatgtgtcagtgtcgtgtc 7918207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 11634176 - 11634118
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcgg 378  Q
    |||||||||||||||||  | |||||||| ||||||||||| ||||||||  |||||||    
T  11634176 ataataatttgagaaaacaacataatttaatgtaatcataggtgtcgtgtgagtgtcgg 11634118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 15449270 - 15449216
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| ||||||||||||||||||| | ||||| ||||||| |||| |||||||||    
T  15449270 aaatcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacac 15449216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 374
Target Start/End: Original strand, 21145466 - 21145528
Alignment:
Q  313 gacacgtataataatttgagaaaa-tgatataatttagtgtaatcatagatgtcgtgtcggtg 374  Q
    |||||| |||||||||||| |||| ||| |||||| |||||||||||||  ||||||||||||    
T  21145466 gacacggataataatttgaaaaaaatgacataattcagtgtaatcataggcgtcgtgtcggtg 21145528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 399 - 437
Target Start/End: Complemental strand, 22881605 - 22881567
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  22881605 cgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 437
Target Start/End: Original strand, 25934673 - 25934746
Alignment:
Q  364 tcgtgtcggtgtcggacaccgacgcatgtccgacacggg-acacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||| ||| | |||| |||||||| | ||| || ||||||| ||||||||||||||||||    
T  25934673 tcgtgtcggtgtcggacac-gacacgtgtctgacacggggatacgccttatccaaggagtgtccgtgcttcatag 25934746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 435
Target Start/End: Complemental strand, 42359460 - 42359391
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcat 435  Q
    ||||||||||||||||  ||||  |||||||||| |||||||| ||||||| || ||||||||||||||||    
T  42359460 gtgtcggtgtcggacaa-gacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 47989518 - 47989572
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| |||||||| |||||||||| | ||||| |||||||||||| |||||||||    
T  47989518 aaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 47989572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 5944304 - 5944361
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||| |||||||| |||||||||||| ||||| |||||||||||  | ||||||||||    
T  5944304 aaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaac 5944361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 437
Target Start/End: Complemental strand, 22794136 - 22794018
Alignment:
Q  314 acacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgac-acgggacacgtctaa 412  Q
    ||||| |||||||||||| ||||||| |||||  |||||||| |||| ||||      ||||| ||||| ||||||||||||||  ||||||||  ||||    
T  22794136 acacggataataatttgaaaaaatgacataatacagtgtaattataggtgtc------gtgtccgacactgacgcatgtccgactccgggacacacctaa 22794043  T
Q  413 tccaagaagtgtccgtgcttcatag 437  Q
    | | || ||||| ||||||||||||    
T  22794042 ttcgaggagtgtacgtgcttcatag 22794018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 25272503 - 25272544
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    |||| ||||||||||||||||||||| ||||| |||||||||    
T  25272503 aaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25272544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 31694748 - 31694691
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||| |||||||| ||| |||||| | ||||| |||||||||||| ||||||||||||    
T  31694748 aaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaac 31694691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Complemental strand, 35919314 - 35919269
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||| |||||||| |||||||||||| ||||| |||||||||||||    
T  35919314 aaatcacataattcagtgtaattataagtgtccgtgtcgtgtcgga 35919269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 48415708 - 48415667
Alignment:
Q  395 gacacgggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    ||||| ||||||| |||||||||| |||||||||||||||||    
T  48415708 gacacaggacacgcctaatccaaggagtgtccgtgcttcata 48415667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 399 - 435
Target Start/End: Complemental strand, 398771 - 398735
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcat 435  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  398771 cgggacacgcctaatctaagaagtgtccgtgcttcat 398735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 5e-33; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 4017853 - 4017729
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaa 412  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||||||||||||  |||| ||||||| ||||| ||||    
T  4017853 gacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtcgtgttggtgtcggacaccgacgtgtgtctgacacggaacacgcctaa 4017754  T
Q  413 tccaagaagtgtccgtgcttcatag 437  Q
    || || |||||| ||||||||||||    
T  4017753 tctaaaaagtgttcgtgcttcatag 4017729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 23751900 - 23752019
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaa 412  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| ||||      ||||||||||||||||| |||| ||||||||||||| ||||    
T  23751900 gacacggataataatttgataaaatgatataatttagtgtaatcataggtgtc------gtgtcggacaccgacgcgtgtcagacacgggacacgcctaa 23751993  T
Q  413 tccaagaagtgtccgtgcttcataga 438  Q
    ||| | ||||||| ||||||||||||    
T  23751994 tccgataagtgtctgtgcttcataga 23752019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 302 - 437
Target Start/End: Complemental strand, 29812733 - 29812598
Alignment:
Q  302 cacggacaccggacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcg--gacaccgacgcatgtccgacac 399  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  | |   | || |   |||||||    
T  29812733 cacggacaccg-acccgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggtgtcggtgtcgga-caccgacac 29812636  T
Q  400 gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  29812635 gggacacgcctaatccgagaagtgtccgtgcttcatag 29812598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 323 - 437
Target Start/End: Complemental strand, 7133327 - 7133212
Alignment:
Q  323 ataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaag 421  Q
    ||||||||||||||||| |||||| ||||||||||||| ||  ||||||||||||||||||||||| |||||||||| |||||||  ||||||  || ||    
T  7133327 ataatttgagaaaatgacataattcagtgtaatcataggtggtgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacctaatctgaggag 7133228  T
Q  422 tgtccgtgcttcatag 437  Q
     |||||||||||||||    
T  7133227 cgtccgtgcttcatag 7133212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 313 - 440
Target Start/End: Complemental strand, 38804614 - 38804486
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgac-acgggacacgtcta 411  Q
    |||||| |||||||||| ||||||||| |||||  || |||||||||| |||||||| |||||||||||||||||  ||||||||  ||||||| | |||    
T  38804614 gacacggataataatttcagaaaatgacataatccagggtaatcataggtgtcgtgttggtgtcggacaccgacgtgtgtccgacgccgggacatgccta 38804515  T
Q  412 atccaagaagtgtccgtgcttcatagaat 440  Q
    |||| || |||||  ||||||||||||||    
T  38804514 atccgaggagtgtatgtgcttcatagaat 38804486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 313 - 399
Target Start/End: Original strand, 23930219 - 23930305
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    |||||| ||| |||||||||||||||| |||||| ||||||||||||| ||| |||||||||||||| ||||| || ||||||||||    
T  23930219 gacacggatagtaatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcggataccgatgcgtgtccgacac 23930305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 21880160 - 21880272
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacg-ggacacgtctaatccaaga 419  Q
    ||||||||||||||||| | |||||| |||||||| | |      ||||||||||||||||| ||| ||||||||||||  ||||||| ||||||| |||    
T  21880160 taataatttgagaaaattacataattcagtgtaattacaa-----gtgtcggtgtcggacac-gacacatgtccgacaccaggacacgcctaatccgaga 21880253  T
Q  420 agtgtccgtgcttcataga 438  Q
    |||||||||||||||||||    
T  21880254 agtgtccgtgcttcataga 21880272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 313 - 432
Target Start/End: Original strand, 43249993 - 43250118
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggt-----gtcggacaccgacgcatgtccgaca-cgggacac 406  Q
    |||||| |||||||||||||||||||| |||||  |||||||| |||  ||||||||||||     ||||||||| ||||| ||||||||| | ||||||    
T  43249993 gacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgtcgcgtcggacactgacgcgtgtccgacaccaggacac 43250092  T
Q  407 gtctaatccaagaagtgtccgtgctt 432  Q
    | ||||| | || |||||||||||||    
T  43250093 gcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 383
Target Start/End: Complemental strand, 10230125 - 10230062
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacacc 383  Q
    ||||||||||||| |||||| |||||| |||||||  ||||||||||||| |||||||||||||    
T  10230125 ataataatttgaggaaatgacataattcagtgtaagtatagatgtcgtgttggtgtcggacacc 10230062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 395
Target Start/End: Complemental strand, 17780136 - 17780061
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccg 395  Q
    |||||||||| ||||||||| ||||||   |||||| |||| |||||||||||||||| |||||||||| ||||||    
T  17780136 ataataatttaagaaaatgacataattctatgtaataataggtgtcgtgtcggtgtcgaacaccgacgcgtgtccg 17780061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 598256 - 598327
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||| ||||| ||| | |||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  598256 gtgtcggtgtcagacac-gacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 369
Target Start/End: Original strand, 13427576 - 13427632
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgt 369  Q
    |||||| | |||||||||| ||||||| |||||||||| ||||||||||||||||||    
T  13427576 gacacggaaaataatttgaaaaaatgacataatttagtataatcatagatgtcgtgt 13427632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 437
Target Start/End: Complemental strand, 41229348 - 41229237
Alignment:
Q  322 aataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgg-gacacgtctaatccaagaa 420  Q
    |||||||||||||||||| ||||||  || |||||||||     | |||||||||||||||| |||| |||||| ||| | |||||| |||||   ||||    
T  41229348 aataatttgagaaaatgacataattctgtataatcatag-----gcgtcggtgtcggacaccaacgcgtgtccgtcactgcgacacgcctaatatgagaa 41229254  T
Q  421 gtgtccgtgcttcatag 437  Q
    |||||||||||||||||    
T  41229253 gtgtccgtgcttcatag 41229237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 320 - 399
Target Start/End: Original strand, 5938479 - 5938558
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    |||||||||||| ||||| | |||||| ||| |||| |||| ||| ||||||||||| |||||||| || ||||||||||    
T  5938479 ataataatttgataaaataacataattcagtataattataggtgttgtgtcggtgtcagacaccgatgcgtgtccgacac 5938558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 18013112 - 18013070
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtc 75  Q
    ||||||||||||| |||||||||||| ||||||||||||||||    
T  18013112 aaattacataattcagtgtaattatatgtgtcagtgtcgtgtc 18013070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 320 - 369
Target Start/End: Complemental strand, 22683807 - 22683758
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgt 369  Q
    ||||||||||||||| ||||||||||| |||| |||||||| ||||||||    
T  22683807 ataataatttgagaatatgatataattcagtgcaatcataggtgtcgtgt 22683758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 24339656 - 24339717
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| |||| |||||||| |||||||||| | ||||| |||||||||||| |||||||||    
T  24339656 tttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacac 24339717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 24339697 - 24339773
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    ||||||||||||||||||||| ||| | | |||||||| |||||||| ||||||| || |||| ||||||||||||||    
T  24339697 tgtcgtgtcggtgtcggacac-gacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcataga 24339773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 9778576 - 9778624
Alignment:
Q  390 tgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| |||||||| |||||||||| ||||||||||||||||||    
T  9778576 tgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 15680857 - 15680928
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacacgg-gacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| ||| | |||||||||| | |||||||||||| | || ||||||||||||||||||    
T  15680857 gtgtcggtgtcggacac-gacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 436
Target Start/End: Complemental strand, 18035854 - 18035806
Alignment:
Q  388 catgtccgacacgggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    |||||| ||||||| ||||||||||||| || |||||||||||||||||    
T  18035854 catgtctgacacggaacacgtctaatccgaggagtgtccgtgcttcata 18035806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 7328729 - 7328686
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcg 76  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||    
T  7328729 aaataacataatttagtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 1433462 - 1433578
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcg-tgtcggtgtcggacaccgacgcatgtccgacacg-ggacacgtctaatccaag 418  Q
    ||||||||||||||||| | || |||| ||||||| |||  ||||| ||||| |||||||||  |||   ||||||||||  ||||||||||||||| ||    
T  1433462 taataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcg-tgtcggacaa-gacatgtgtccgacaccaggacacgtctaatccgag 1433559  T
Q  419 aagtgtccgtgcttcatag 437  Q
     ||||||||||||||||||    
T  1433560 gagtgtccgtgcttcatag 1433578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 5409836 - 5409771
Alignment:
Q  372 gtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||| ||| | |||||||||| |||||||| ||||||| || ||||||||||||||||||    
T  5409836 gtgtcggacac-gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 5548704 - 5548742
Alignment:
Q  40 ataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  5548704 ataattcagtgtaattatatgtgtcagtgtcgtgtcgga 5548742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 8160437 - 8160491
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||||||||||||||||||||||| ||||  || ||||||||| |||| ||||    
T  8160437 aaattacataatttagtgtaattatatgtgttggtatcgtgtcggtgtcgaacac 8160491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 15902843 - 15902897
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| ||||||||||||||||||||| ||||| |||| |||||||  ||||||||    
T  15902843 aaatcacataatttagtgtaattatatgtgtcggtgttgtgtcggtatcggacac 15902897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 32308141 - 32308195
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| |||||||| ||||||||| || |||||||||||||||||| || ||||||    
T  32308141 aaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacac 32308195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 320 - 358
Target Start/End: Complemental strand, 46644739 - 46644701
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcat 358  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  46644739 ataataatttgaaaaaattatataatttagtgtaatcat 46644701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 436
Target Start/End: Original strand, 4794985 - 4795018
Alignment:
Q  403 acacgtctaatccaagaagtgtccgtgcttcata 436  Q
    ||||||||||||||||||||||| ||||||||||    
T  4794985 acacgtctaatccaagaagtgtctgtgcttcata 4795018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Complemental strand, 9408379 - 9408318
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| |||| ||||||||||||||||||| | ||||| ||||||| |||| ||| |||||    
T  9408379 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacac 9408318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 2334305 - 2334379
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacacggga-cacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| |||||||||| ||| |||||||||||| | | |||||||||||| || |||||||||| |||||||    
T  2334305 tgtcgtgtcg-tgtcggacac-gacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 10042963 - 10042999
Alignment:
Q  38 acataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10042963 acataatttagcgtaattataagtgtcagtgtcgtgt 10042999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 12278842 - 12278894
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcgg 372  Q
    |||||||||| ||||||||| |||||| |||||||| |||  |||||||||||    
T  12278842 ataataatttaagaaaatgacataattcagtgtaattatatgtgtcgtgtcgg 12278894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 437
Target Start/End: Original strand, 21864856 - 21864927
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||| |||||||||| ||| | |||||||||| |||||||||||||| | || |||||| |||||||||||    
T  21864856 gtgtcgctgtcggacac-gacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatag 21864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 40131987 - 40131939
Alignment:
Q  390 tgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| |||||||||||||||| || |||||| |||||||||||    
T  40131987 tgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatag 40131939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 293 - 442
Target Start/End: Original strand, 25074768 - 25074919
Alignment:
Q  293 cctatgaagcacggacac-cggacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatg 391  Q
    |||||||||||||||||| | |||||  |||||||||||||||||||| |||||| |||||||||||||  || ||||||||||| |||||| |||| ||    
T  25074768 cctatgaagcacggacacgccgacaccgataataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcggtgtctgacaccaacgcgtg 25074867  T
Q  392 tccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatagaatat 442  Q
    |||||||| |||||||  ||||||| || ||||| |||||||||||| ||||    
T  25074868 tccgacactgggacacacctaatccgaggagtgttcgtgcttcatagcatat 25074919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 314 - 431
Target Start/End: Complemental strand, 12704715 - 12704597
Alignment:
Q  314 acacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaa 412  Q
    ||||| |||||||||||| ||||||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||||||||| | | ||||||||||    
T  12704715 acacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtcggtgtcggacaccaacgcatgtccgacaccagaacacgtctaa 12704616  T
Q  413 tccaagaagtgtccgtgct 431  Q
    ||| || ||||||||||||    
T  12704615 tcctaggagtgtccgtgct 12704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 313 - 436
Target Start/End: Original strand, 15864833 - 15864950
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaa 412  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||| ||||      ||||||||||||||| | |||| ||||||||||||| ||||    
T  15864833 gacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgtc------gtgtcggacaccgacacgtgtctgacacgggacacgcctaa 15864926  T
Q  413 tccaagaagtgtccgtgcttcata 436  Q
    |||||  |||||||||||||||||    
T  15864927 tccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 320 - 437
Target Start/End: Original strand, 27903639 - 27903757
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacggga-cacgtctaatccaag 418  Q
    ||||||||||||||||| ||||||||||| ||||||||||  ||| |||||||||||||| |||||||| |||| ||||| ||| || | ||||||| ||    
T  27903639 ataataatttgagaaaacgatataatttaatgtaatcataagtgttgtgtcggtgtcggataccgacgcgtgtctgacactggatcatgcctaatccgag 27903738  T
Q  419 aagtgtccgtgcttcatag 437  Q
    |||||||||||||||||||    
T  27903739 aagtgtccgtgcttcatag 27903757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 320 - 414
Target Start/End: Complemental strand, 14223905 - 14223811
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaatc 414  Q
    ||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||| ||||||||| | ||||||||| |||||||| ||||||    
T  14223905 ataataatttgagaaaacgatataatttagtgtattcataagtgtcgtgtcggtgtccgacaccgacacgtgtccgacatgggacacgcctaatc 14223811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 321 - 435
Target Start/End: Original strand, 29508452 - 29508567
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcg-tgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaag 418  Q
    ||||||||||| ||||| |||||||| |||||||| |||  ||||| ||| |||||||||||| ||| || ||||||||| |||||||||||||||||||    
T  29508452 taataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacac-gacacacgtccgacaccgggacacgtctaatccaag 29508550  T
Q  419 aagtgtccgtgcttcat 435  Q
    |||||||||||||||||    
T  29508551 aagtgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 320 - 399
Target Start/End: Original strand, 25326433 - 25326512
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    |||||||||| | ||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||| ||| ||||||    
T  25326433 ataataatttaaaaaaataatataatttagtgtaattatagatgtcgtgttggtgtcggacaccgacgcgtgttcgacac 25326512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 8903432 - 8903554
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaa 412  Q
    |||||| |||||| ||||||||||||| ||| ||||||||||| |||| |||||||||| || |||||||| | || |||||||| ||||||||  ||||    
T  8903432 gacacggataatattttgagaaaatgacata-tttagtgtaattataggtgtcgtgtcgatgccggacacctatgcgtgtccgac-cgggacacacctaa 8903529  T
Q  413 tccaagaagtgtccgtgcttcatag 437  Q
    ||| || ||||| ||||||||||||    
T  8903530 tccgaggagtgttcgtgcttcatag 8903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 314 - 437
Target Start/End: Original strand, 21211289 - 21211413
Alignment:
Q  314 acacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaa 412  Q
    ||||| |||||||||||||||||| | ||| || |||||||| || | ||||||||||||||  ||||||||||| |||||||||| |||||||  ||||    
T  21211289 acacggataataatttgagaaaattacatagttcagtgtaattatgggtgtcgtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaa 21211388  T
Q  413 tccaagaagtgtccgtgcttcatag 437  Q
    ||| || |||||  |||||||||||    
T  21211389 tccgaggagtgtttgtgcttcatag 21211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 25892467 - 25892535
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgc 388  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||||||||| |||||||||||| ||||    
T  25892467 ataataatttaagaaaatgatataattcagtgtaatcataggtgtcgtgtcagtgtcggacaccaacgc 25892535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 320 - 437
Target Start/End: Original strand, 52369782 - 52369906
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtg------tcggacaccgacgcatgtccgaca-cgggacacgtctaa 412  Q
    |||||||||||||||||| | |||||| | ||||||||||| |||||||||||||      |||||||||||||| ||||| ||| ||||||||  |||     
T  52369782 ataataatttgagaaaattacataattcaatgtaatcataggtgtcgtgtcggtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctat 52369881  T
Q  413 tccaagaagtgtccgtgcttcatag 437  Q
    ||| || ||||||||||||||||||    
T  52369882 tccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 21367289 - 21367346
Alignment:
Q  325 aatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacac 382  Q
    ||||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||    
T  21367289 aatttgagaaaatgacataatttagtgtaatcatggttgttgtgtcggtgtcggacac 21367346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 399
Target Start/End: Complemental strand, 25652089 - 25652004
Alignment:
Q  314 acacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacac 399  Q
    ||||| ||||||||||||||||||||||||||| |||||| | |||| ||| ||||| |||| |||||||||| | ||| ||||||    
T  25652089 acacggataataatttgagaaaatgatataattcagtgtagttataggtgttgtgtcagtgttggacaccgacacgtgttcgacac 25652004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 41961654 - 41961579
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||| |||||||| ||| | |||||||||| |||||||| ||||||| |||||||||||||||||||||    
T  41961654 tgtcgtgtcggtatcggacac-gacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 362 - 436
Target Start/End: Original strand, 37077413 - 37077488
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    |||| ||||||||||| |||| |||||||||||||||| |||||||  |||||||||| | |||||||||||||||    
T  37077413 tgtcatgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcata 37077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 14209168 - 14209243
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||||||| ||| | ||| ||||| ||||| ||  |||||||||||||||||||||||||||||    
T  14209168 tgtcgtgtcggtgtcggacac-gacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 435
Target Start/End: Complemental strand, 24205100 - 24204983
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtcta 411  Q
    |||||| |||||||||||||||||||| |||||  |||||||| |||  |||||||      |||||||| ||||| ||||||||| | ||||||| |||    
T  24205100 gacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtg------tcggacactgacgcgtgtccgacaccaggacacgccta 24205007  T
Q  412 atccaagaagtgtccgtgcttcat 435  Q
    || | || ||||||||||||||||    
T  24205006 attcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 40993346 - 40993275
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||||||| |||| ||||||||||| ||||||||| ||||||| || ||||||| ||||||||||    
T  40993346 gtgtcggtgtcggaca-cgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 319 - 370
Target Start/End: Complemental strand, 3730218 - 3730167
Alignment:
Q  319 tataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtc 370  Q
    ||||||||||||||| ||||| |||||| ||||||||||||| |||||||||    
T  3730218 tataataatttgagataatgacataattcagtgtaatcataggtgtcgtgtc 3730167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 320 - 367
Target Start/End: Original strand, 21149074 - 21149121
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgt 367  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||||    
T  21149074 ataataatttgagaaaatgacataattcagtgtaatcaaagatgtcgt 21149121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 294 - 369
Target Start/End: Original strand, 34189409 - 34189483
Alignment:
Q  294 ctatgaagcacggacaccggacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgt 369  Q
    |||||||||||||||| || ||||  |||||||||||||||||||| ||| || ||||||||| ||| ||||||||    
T  34189409 ctatgaagcacggacatcg-acacagataataatttgagaaaatgacatatttcagtgtaatcgtaggtgtcgtgt 34189483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 14209134 - 14209188
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| |||||||| |||||||||| | |||||||||||||||||| |||||||||    
T  14209134 aaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacac 14209188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 436
Target Start/End: Complemental strand, 51512232 - 51512118
Alignment:
Q  323 ataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaag 421  Q
    ||||||||| ||||| | |||||| | || |||||||  |||||||||||||||| ||||||| || |||| |||| | ||||||| |||| | ||| ||    
T  51512232 ataatttgataaaatcacataattcaatggaatcatatgtgtcgtgtcggtgtcgaacaccgatgcgtgtctgacaccaggacacgcctaacctaaggag 51512133  T
Q  422 tgtccgtgcttcata 436  Q
    |||||| ||||||||    
T  51512132 tgtccgcgcttcata 51512118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 33 - 86
Target Start/End: Complemental strand, 8039873 - 8039820
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggaca 86  Q
    |||||| |||||| |||||||||||| ||||| |||||||||||| ||||||||    
T  8039873 aaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca 8039820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 438
Target Start/End: Original strand, 20503513 - 20503585
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||||||||| |||||| ||| |||||| ||||| |||||||| ||||||| || |||||||||||||||||||    
T  20503513 gtgtcggtgttggacac-gacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcataga 20503585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 382
Target Start/End: Complemental strand, 34307831 - 34307770
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacac 382  Q
    ||||||||||||||||| | ||| || |||||||| |||  |||||||||||||||||||||    
T  34307831 taataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcggtgtcggacac 34307770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 55401083 - 55401194
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccgacgcatgtccgacacgg-gacacgtctaatccaaga 419  Q
    ||||||||||| ||||| | ||||||||||||||| | |      ||||||||||||||||| ||| | |||||||||| | |||||| ||||||| ||     
T  55401083 taataatttgaaaaaatcacataatttagtgtaattacaa-----gtgtcggtgtcggacac-gacacgtgtccgacaccgagacacgcctaatccgagg 55401176  T
Q  420 agtgtccgtgcttcatag 437  Q
    ||||||||||||||||||    
T  55401177 agtgtccgtgcttcatag 55401194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 33 - 76
Target Start/End: Complemental strand, 11313838 - 11313795
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcg 76  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||    
T  11313838 aaatcacataatttagtgtaattatatgtgttagtgtcgtgtcg 11313795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 359
Target Start/End: Original strand, 20691326 - 20691365
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcata 359  Q
    |||||||||||||||||||| |||||| ||||||||||||    
T  20691326 ataataatttgagaaaatgacataattcagtgtaatcata 20691365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 359
Target Start/End: Complemental strand, 40150623 - 40150584
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcata 359  Q
    ||||||||||||||||||||||||||| | ||||||||||    
T  40150623 ataataatttgagaaaatgatataattcaatgtaatcata 40150584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 321 - 367
Target Start/End: Original strand, 1830351 - 1830397
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcgt 367  Q
    ||||||||| ||||||||| |||||| ||||||||||||| ||||||    
T  1830351 taataatttaagaaaatgacataattcagtgtaatcataggtgtcgt 1830397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 49505192 - 49505154
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcg 71  Q
    |||| ||||||||||||||||||||| ||||||||||||    
T  49505192 aaatcacataatttagtgtaattatatgtgtcagtgtcg 49505154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 87
Target Start/End: Original strand, 1509553 - 1509614
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||| |||| ||||||||||||||||||| | ||||| ||||||| |||| ||| |||||    
T  1509553 tttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacac 1509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 1550154 - 1550203
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtc 75  Q
    |||||| |||| |||  ||| |||||||||||||||||||||||||||||    
T  1550154 tttgaaaaaatcacactattcagtgtaattataggtgtcagtgtcgtgtc 1550203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 34910398 - 34910435
Alignment:
Q  399 cgggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    ||||||||||||||||| || |||||||||||||||||    
T  34910398 cgggacacgtctaatccgaggagtgtccgtgcttcata 34910435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 443
Target Start/End: Complemental strand, 51206340 - 51206287
Alignment:
Q  391 gtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatagaatata 443  Q
    ||||||||| |||| || ||||||||||| |||||||||||||||||| |||||    
T  51206340 gtccgacaccgggatacctctaatccaaggagtgtccgtgcttcatagtatata 51206287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 10268531 - 10268487
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtc 70  Q
    |||||| |||| ||||||||||||||||||| | |||||||||||    
T  10268531 tttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtc 10268487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 437
Target Start/End: Complemental strand, 13845536 - 13845465
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacacgg-gacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    ||||||||||||||||| ||  | |||| ||||||| |||||| || ||||||| ||||||||||||||||||    
T  13845536 gtgtcggtgtcggacac-gagacgtgtctgacacggagacacgccttatccaaggagtgtccgtgcttcatag 13845465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 15314921 - 15314873
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    |||||| |||| ||||||||||||||||||||| ||||  |||||||||    
T  15314921 tttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 16789067 - 16789142
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacacgggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    ||||||||| ||||||||||  ||| ||||||| |||||||||||  |||||   || |||||||||||||||||||    
T  16789067 tgtcgtgtcagtgtcggacat-gacacatgtccaacacgggacacacctaatttgaggagtgtccgtgcttcataga 16789142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 320 - 372
Target Start/End: Original strand, 25365469 - 25365521
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcgg 372  Q
    ||||||||||||||| |||| ||||||  |||||||||||  |||||||||||    
T  25365469 ataataatttgagaatatgacataattcggtgtaatcataagtgtcgtgtcgg 25365521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 25948932 - 25948880
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||||| |||| |||||||| |||||||||||| ||||  |||||||||||||    
T  25948932 tttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcgga 25948880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 437
Target Start/End: Complemental strand, 34185100 - 34185052
Alignment:
Q  390 tgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| |||||||| ||||||| || ||||||||||||||||||    
T  34185100 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 241649 - 241725
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||||||| |||||||||||| ||| | |||||||||| |||||||| ||||||| ||||||||||||||||||||||    
T  241649 tgtcgtgttggtgtcggacac-gacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcataga 241725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 241615 - 241669
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| ||||||||||||||||||||  ||||| ||||||||| || |||||||||    
T  241615 aaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacac 241669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 313 - 372
Target Start/End: Original strand, 1949 - 2008
Alignment:
Q  313 gacacgtataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcgg 372  Q
    |||||| ||||||||||| |||||||| ||| |||||||||||||||| |||||||||||    
T  1949 gacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgtcgtgtcgg 2008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 90
Target Start/End: Original strand, 1049 - 1113
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||||| ||||||||||||| ||||||| |||| |||||||||| ||||||| || |||||||||    
T  1049 tttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcggtgttggacacaac 1113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 4413 - 4477
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcggacaccg 384  Q
    |||||||||| |||| ||||||||||| ||||| |||||||||||||||   |||||||||||||    
T  4413 ataataatttaagaatatgatataattcagtgtcatcatagatgtcgtgctagtgtcggacaccg 4477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 430
Target Start/End: Original strand, 53189 - 53303
Alignment:
Q  322 aataatttgagaaaatgatataatttagtgtaatcatagatgtcg------tgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatc 414  Q
    |||||||||||||||| | |||||| |||||||| |||  |||||      |||||||||||||||  ||| | |||||||||| ||||||||| |||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacat-gacacgtgtccgacaccgggacacgtttaatc 53287  T
Q  415 caagaagtgtccgtgc 430  Q
    ||||||||||||||||    
T  53288 caagaagtgtccgtgc 53303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 86
Target Start/End: Original strand, 53201 - 53254
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggaca 86  Q
    |||| |||||||| |||||||||||| ||||| ||| |||||||| ||||||||    
T  53201 aaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggaca 53254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  366 gtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcata 436  Q
    ||||||||||||||||| ||||| |||||||||| |||||||  ||||||| || |||||||||||||||||    
T  473 gtgtcggtgtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 8105 - 8047
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcggtgtcgg 378  Q
    |||||||||||||||||||| |||||| ||||||| ||||| | |||||||||| ||||    
T  8105 ataataatttgagaaaatgacataattcagtgtaaacataggtatcgtgtcggtttcgg 8047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 23532 - 23586
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| |||||||| |||||||||||| ||||||||||||| |||| |||||||||    
T  23532 aaatcacataattcagtgtaattataagtgtcagtgtcgtttcggtgtcggacac 23586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 23441 - 23486
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcgga 78  Q
    |||| |||||||| |||||||||||| ||||| |||||||||||||    
T  23441 aaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgga 23486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 68273 - 68223
Alignment:
Q  40 ataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||||||||| |||||||||||||||||||||| |||| |||| |||||||    
T  68273 ataatttagtataattataggtgtcagtgtcgtatcggtgtcgaacacaac 68223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 321 - 365
Target Start/End: Complemental strand, 68293 - 68249
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtc 365  Q
    ||||||||||||||||| |||||||||||| |||| |||| ||||    
T  68293 taataatttgagaaaatcatataatttagtataattataggtgtc 68249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 263405 - 263356
Alignment:
Q  38 acataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||||||| |||||||||||| |||||||||||||||||| ||| |||||    
T  263405 acataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacac 263356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 438
Target Start/End: Complemental strand, 4876 - 4820
Alignment:
Q  383 cgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcataga 438  Q
    |||| |||||||||||| |||||||| ||||||| || |||||||||||||||||||    
T  4876 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcataga 4820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 3853 - 3778
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgaca-cgggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||| ||||||||||| |||| ||||||||||| || |||||| ||||||| || ||||||| ||||||||||    
T  3853 tgtcgtgttggtgtcggaca-cgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Complemental strand, 3887 - 3833
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacac 87  Q
    |||| |||||||| |||||||||| | ||||||||||||||| || |||||||||    
T  3887 aaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacac 3833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 323 - 359
Target Start/End: Original strand, 56932 - 56968
Alignment:
Q  323 ataatttgagaaaatgatataatttagtgtaatcata 359  Q
    |||||||||||||||||||||||| ||||||||||||    
T  56932 ataatttgagaaaatgatataattcagtgtaatcata 56968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 362 - 437
Target Start/End: Original strand, 71780 - 71855
Alignment:
Q  362 tgtcgtgtcggtgtcggacaccgacgcatgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||||||||||||||  || | |||||||||| |||||||| ||||||| || |||||| |||||||||||    
T  71780 tgtcgtgtcggtgtcggacaca-acacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

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Target: scaffold0019; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 71746 - 71803
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||| ||| |||| ||||||||||   |||||||||||||||||| ||||||||||||    
T  71746 aaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaac 71803  T

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Target: scaffold0223 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 77
Target Start/End: Original strand, 20186 - 20237
Alignment:
Q  26 tttgaataaattacataatttagtgtaattataggtgtcagtgtcgtgtcgg 77  Q
    |||||| |||| |||||||| |||||||||| | ||||||||||||||||||    
T  20186 tttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcgg 20237  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 24052 - 24102
Alignment:
Q  39 cataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||||||||||||||||| || | ||||||||||||||| ||||||||||||    
T  24052 cataatttagtgtaattacagtt-tcagtgtcgtgtcggtgtcggacacaac 24102  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 25806 - 25765
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgt 74  Q
    |||| ||||||||||||||||||||| ||||| |||||||||    
T  25806 aaatcacataatttagtgtaattataagtgtcggtgtcgtgt 25765  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 44563 - 44506
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcggagtcggacacaac 90  Q
    |||| |||||||| |||||||||||| ||||| || ||||||||| || |||||||||    
T  44563 aaatcacataattcagtgtaattatatgtgtcggtatcgtgtcggtgttggacacaac 44506  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 366
Target Start/End: Original strand, 90851 - 90896
Alignment:
Q  321 taataatttgagaaaatgatataatttagtgtaatcatagatgtcg 366  Q
    ||||||||||||||||| |||||||| |||||||| ||| ||||||    
T  90851 taataatttgagaaaatcatataattcagtgtaattatatatgtcg 90896  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 435
Target Start/End: Complemental strand, 225320 - 225199
Alignment:
Q  320 ataataatttgagaaaatgatataatttagtgtaatcatagatgtcgtgtcg-----gtgtcggacaccgacgcatgtccgaca-cgggacacgtctaat 413  Q
    |||||||||||||||||||| |||||  | |||||| |||  |||||||| |     ||||||||||| ||||| ||| ||||| | ||||||| |||||    
T  225320 ataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgtcgtgtcggacactgacgcgtgttcgacaccaggacacgcctaat 225221  T
Q  414 ccaagaagtgtccgtgcttcat 435  Q
     | || ||||||||||||||||    
T  225220 tcgaggagtgtccgtgcttcat 225199  T

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Target: scaffold0380 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 437
Target Start/End: Original strand, 8672 - 8720
Alignment:
Q  390 tgtccgacac-gggacacgtctaatccaagaagtgtccgtgcttcatag 437  Q
    |||||||||| |||| ||| |||||||||| ||||||||||||||||||    
T  8672 tgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 2949 - 2993
Alignment:
Q  33 aaattacataatttagtgtaattataggtgtcagtgtcgtgtcgg 77  Q
    |||| ||||||||||||||||||| | || |||||||||||||||    
T  2949 aaatcacataatttagtgtaattacaagtatcagtgtcgtgtcgg 2993  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 319 - 359
Target Start/End: Complemental strand, 240074 - 240034
Alignment:
Q  319 tataataatttgagaaaatgatataatttagtgtaatcata 359  Q
    ||||||||||||||||||| |||||||| | ||||||||||    
T  240074 tataataatttgagaaaataatataattcaatgtaatcata 240034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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