View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15918_high_1 (Length: 565)
Name: NF15918_high_1
Description: NF15918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15918_high_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 505; Significance: 0; HSPs: 23)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 505; E-Value: 0
Query Start/End: Original strand, 16 - 552
Target Start/End: Original strand, 13161384 - 13161920
Alignment:
| Q |
16 |
cacagaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaaga |
115 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13161384 |
cacagaaagccttggggttacaaggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaaga |
13161483 |
T |
|
| Q |
116 |
tctttacctatacaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggct |
215 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13161484 |
tctttacctatacaaattctgggtcctgtgttgaaagatatgaacttgtaagaaggtacatgtataatatctcccctctcagatatccatctctcaggct |
13161583 |
T |
|
| Q |
216 |
taaattccatgcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactagg |
315 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |
|
|
| T |
13161584 |
taaattccatgcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacttgtatttggactaatacgttctccactagg |
13161683 |
T |
|
| Q |
316 |
tagtatatcggatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatca |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13161684 |
tagtatatcggatttgattgcacagatatgctcaaaaggtataggtggataaagccttaaggtttcacatatagctccatggaggtatactagcttatca |
13161783 |
T |
|
| Q |
416 |
agaaccacatccctcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaa |
515 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13161784 |
agaaccacatccctcaaaataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaa |
13161883 |
T |
|
| Q |
516 |
ggagccagaaaaaccaactgagagctgaactaattga |
552 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13161884 |
ggagccagaaaaaccaactgagagctgaactaattga |
13161920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 14 - 552
Target Start/End: Original strand, 13129689 - 13130227
Alignment:
| Q |
14 |
agcacagaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaa |
113 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13129689 |
agcacagaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaa |
13129788 |
T |
|
| Q |
114 |
gatctttacctatacaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcagg |
213 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13129789 |
gatctttacctatacaaattctgggtcctgtgttgaaagctacgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcagg |
13129888 |
T |
|
| Q |
214 |
cttaaattccatgcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccacta |
313 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||| || ||| |||||||||||||| | | | ||||||| |
|
|
| T |
13129889 |
cttaaattccatgcagtcttctccccatatttgttccatccttcccatagaatacaaagagtaaatcaaagttgtatttggactaacatggtatccacta |
13129988 |
T |
|
| Q |
314 |
ggtagtatatcggatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttat |
413 |
Q |
| |
|
||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13129989 |
ggtagtatatcagatttgattgaacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttat |
13130088 |
T |
|
| Q |
414 |
caagaaccacatccctcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttga |
513 |
Q |
| |
|
||||| |||||| |||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13130089 |
caagatccacatgcctcaaagtaatccgattaccctcttgtgttaaccaattatctttgatctcttgaatgattttttcttccacaataggataagttga |
13130188 |
T |
|
| Q |
514 |
aaggagccagaaaaaccaactgagagctgaactaattga |
552 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
13130189 |
aagaagccagaaaaaccaactgagagctgaactaattga |
13130227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 16 - 551
Target Start/End: Original strand, 13094262 - 13094797
Alignment:
| Q |
16 |
cacagaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaaga |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
13094262 |
cacagaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaata |
13094361 |
T |
|
| Q |
116 |
tctttacctatacaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggct |
215 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13094362 |
tctttacctatacaaattctgggtcctgtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggct |
13094461 |
T |
|
| Q |
216 |
taaattccatgcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactagg |
315 |
Q |
| |
|
||||||||||||||||||| ||||||| |||||||||||| ||||||||||||| |||||| |||||| |||||||||| ||| | | | ||||||||| |
|
|
| T |
13094462 |
taaattccatgcagtcttctccccatatttgttccatccttcccatagaatacaaagagtaaattaaagttgtatttggagtaacatggtatccactagg |
13094561 |
T |
|
| Q |
316 |
tagtatatcggatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatca |
415 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13094562 |
tagtatatcagatttgattgcacagatatgctcaaaaggtacaggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatca |
13094661 |
T |
|
| Q |
416 |
agaaccacatccctcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaa |
515 |
Q |
| |
|
||| ||||||||||||| ||||||||| ||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13094662 |
agatccacatccctcaaagtaatccgataatcctctcgtgttaaccaattatctctgatctcttgaatgattttttcttccacaataggataagttgaaa |
13094761 |
T |
|
| Q |
516 |
ggagccagaaaaaccaactgagagctgaactaattg |
551 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13094762 |
gaagccagaaaaaccaactgagagctgaactaattg |
13094797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 20 - 544
Target Start/End: Complemental strand, 13070501 - 13069977
Alignment:
| Q |
20 |
gaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctt |
119 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13070501 |
gaaagctttggggttacagggtgaccttccaccacctgtatgtgaaacttctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctt |
13070402 |
T |
|
| Q |
120 |
tacctatacaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaa |
219 |
Q |
| |
|
|||| | |||| |||| || || || |||||||||||||||||||||||||| ||||||||||| | ||| |||| |||| |||||||||||||||||| |
|
|
| T |
13070401 |
tacccaaacaacttctcggacctgtattgaaagctatgaacttgtaagatggaacatgtataatgtgtcctgtctctgatacccatctctcaggcttaaa |
13070302 |
T |
|
| Q |
220 |
ttccatgcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagt |
319 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||| ||||||| |||| |||||||| ||| | |||||||||||||| ||||||||||||||||||| |
|
|
| T |
13070301 |
ttccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaagagtacaataaccttgtatttggactaacacgctctccactaggtagt |
13070202 |
T |
|
| Q |
320 |
atatcggatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaagaa |
419 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||| |||||||||||| || ||||||||||||||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
13070201 |
atatcggatttgattgcacatatatgctcaaaaggtacaggaggataaagtctcaaggtttcacatatagctccatgaaggtacactagattatcaagat |
13070102 |
T |
|
| Q |
420 |
ccacatccctcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggag |
519 |
Q |
| |
|
||||||| ||| | | || |||| ||||||||||| |||| |||||||| || |||||||| ||||| ||||||||||||||| |||||||| || |
|
|
| T |
13070101 |
ccacatctctccaaggagtctgattctcctcttgtgtgggccagttatcttttatttcttgaataattttggcttccacaataggatgagttgaaacaag |
13070002 |
T |
|
| Q |
520 |
ccagaaaaaccaactgagagctgaa |
544 |
Q |
| |
|
||||||||||||||||||| ||||| |
|
|
| T |
13070001 |
ccagaaaaaccaactgagacctgaa |
13069977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 19 - 548
Target Start/End: Original strand, 13100867 - 13101395
Alignment:
| Q |
19 |
agaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatct |
118 |
Q |
| |
|
||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||| |
|
|
| T |
13100867 |
agaaagcttcggggttatagggtgaccttccaccacctgtatgtgaaacttcggtaacaaagcagctgcgaccatcttcatttgaatgaagctaatatcc |
13100966 |
T |
|
| Q |
119 |
ttacctatacaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaa |
218 |
Q |
| |
|
||||| |||||| |||| ||||| | |||||||||||||||||||||||||||||||||||||| | ||| ||||| || | ||||||||||||||||| |
|
|
| T |
13100967 |
ttacccatacaacttctaggtcctga-ttgaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgacacccatctctcaggcttaa |
13101065 |
T |
|
| Q |
219 |
attccatgcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtag |
318 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||| ||||||| |||| |||||||| ||| | |||||||||||||| ||||||||||||||| || |
|
|
| T |
13101066 |
attccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaagagtacaataaccttgtatttggactaaaacgctctccactaggaag |
13101165 |
T |
|
| Q |
319 |
tatatcggatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaaga |
418 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
13101166 |
tatatcggatttgattgaacatatatgctcaaaaggtacaggaggataaagcctcaaggtttcacatatagctccatggaggtacactagcttatcaaga |
13101265 |
T |
|
| Q |
419 |
accacatccctcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaagga |
518 |
Q |
| |
|
| |||| ||| | |||| |||| ||||||||||| | || ||||||||||| |||||||| ||||| ||||||||||||||| ||| |||| | |
|
|
| T |
13101266 |
tactcatctctcgaaggaatctgattctcctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaa |
13101365 |
T |
|
| Q |
519 |
gccagaaaaaccaactgagagctgaactaa |
548 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
13101366 |
gccagaaaaaccaactgagagctgaactaa |
13101395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 19 - 551
Target Start/End: Original strand, 13007066 - 13007598
Alignment:
| Q |
19 |
agaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatct |
118 |
Q |
| |
|
||||||| | ||||||| |||||||||| ||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||| |||| ||| |
|
|
| T |
13007066 |
agaaagcttcggggttatagggtgacctgccaccacctttatgtgaaactttggtaacaaagctgctgcgaccatcttcatttgaatgaagctaatatcc |
13007165 |
T |
|
| Q |
119 |
ttacctatacaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaa |
218 |
Q |
| |
|
|| || |||||| |||| || || || |||||||||||||||||||||||||||||||||||||| | ||| ||||| || | ||||||||||||||||| |
|
|
| T |
13007166 |
ttgcccatacaacttctaggacctgtattgaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgacacccatctctcaggcttaa |
13007265 |
T |
|
| Q |
219 |
attccatgcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtag |
318 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||| ||||||| |||| |||||||| ||| | |||||||||||||| |||||||||||||||||| |
|
|
| T |
13007266 |
attccatgcagtcttctccccatatttgttccatccttcccatagcgtacaaagagtacaataaccttgtatttggactaacacgctctccactaggtag |
13007365 |
T |
|
| Q |
319 |
tatatcggatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaaga |
418 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | || |||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
13007366 |
tatatcggaattgattgcacagatatgctcaaaaggtacaggaggataaagcctcatggcttcacatagagctccatggaggtacactagcttatcaaga |
13007465 |
T |
|
| Q |
419 |
accacatccctcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaagga |
518 |
Q |
| |
|
||||||| ||||| | || |||| ||||||||||| |||| ||||||||||| |||||||| ||||| ||||||||||||||| |||||||| | |
|
|
| T |
13007466 |
tccacatctctcaaaggagtctgattctcctcttgtgtgggccagttatctttgatttcttgaataattttggcttccacaataggatgagttgaaacaa |
13007565 |
T |
|
| Q |
519 |
gccagaaaaaccaactgagagctgaactaattg |
551 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
13007566 |
gccagaaaaaccaactgagacctgaactaattg |
13007598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 27 - 547
Target Start/End: Original strand, 13204333 - 13204853
Alignment:
| Q |
27 |
ttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctat |
126 |
Q |
| |
|
||||||||||||||||||||||||| | || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
13204333 |
ttggggttacagggtgaccttccactatctttatgtgaaaattctgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacccaa |
13204432 |
T |
|
| Q |
127 |
acaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatg |
226 |
Q |
| |
|
|||| |||| || || || |||||||||||||||||||||||||||||||||||||| | ||| |||| |||| ||||||||||||||||||||||||| |
|
|
| T |
13204433 |
acaacttctaggacctgtattgaaagctatgaacttgtaagatggtacatgtataatgtgtcctgtctctgatacccatctctcaggcttaaattccatg |
13204532 |
T |
|
| Q |
227 |
cagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagtatatcgg |
326 |
Q |
| |
|
|||||||| ||||||| |||||||||||| ||||||| |||| |||||||| ||| | |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13204533 |
cagtcttctccccatatttgttccatccttcccatagcgtacaaagagtacaataaccttgtatttggactaacacgctctccactaggtagtatatcgg |
13204632 |
T |
|
| Q |
327 |
atttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaagaaccacatc |
426 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||||||||||| || |||| |||||||||||||||||| ||||| ||||||||||||||| | |||| |
|
|
| T |
13204633 |
atttgattgcacatatatgctcaaaaggtacaggaggataaagtctcaaggcttcacatatagctccatgaaggtacactagcttatcaagatactcatc |
13204732 |
T |
|
| Q |
427 |
cctcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaa |
526 |
Q |
| |
|
||| | |||| |||| ||||||||||| | || ||||||||||| |||||||| ||||| ||||||||||||||| ||| |||| ||||| ||| |
|
|
| T |
13204733 |
tctcgaaggaatctgattctcctcttgtgtaggacagttatctttgatttcttgaattattttggcttccacaataggatgagtggaaacaagccaaaaa |
13204832 |
T |
|
| Q |
527 |
aaccaactgagagctgaacta |
547 |
Q |
| |
|
|||||||| ||| |||||||| |
|
|
| T |
13204833 |
aaccaacttagacctgaacta |
13204853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 240; E-Value: 1e-132
Query Start/End: Original strand, 29 - 548
Target Start/End: Complemental strand, 30368424 - 30367905
Alignment:
| Q |
29 |
ggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatac |
128 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||| |||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
30368424 |
ggggttacagggtgaccttccacgacctgtatgtgaaacttccataacaaggcagctgcaaccatcttcatttgaacgaaactaagatctttacccatac |
30368325 |
T |
|
| Q |
129 |
aaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgca |
228 |
Q |
| |
|
|| |||| ||||| || |||||||||||||||||||||||||||||||||||||| | ||| ||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
30368324 |
aacttctaggtcctgtattgaaagctatgaacttgtaagatggtacatgtataatgtgtcctctctctgatacccatctctcaggcttaaattccatgca |
30368225 |
T |
|
| Q |
229 |
gtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagtatatcggat |
328 |
Q |
| |
|
||||| ||||||| || ||||||||| ||||||| ||||| |||||| ||||| ||||||||||||| | ||||||||||||||||||||| ||| |
|
|
| T |
30368224 |
atcttctccccatattttttccatccttcccatagcatacaaagagtaaattaacttggtatttggactaacattctctccactaggtagtatatcagat |
30368125 |
T |
|
| Q |
329 |
ttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaagaaccacatccc |
428 |
Q |
| |
|
|||||||||| |||| |||||||||||| || |||||| | ||| | || |||||||||||||||||||||||| |||||||||||||| | || |
|
|
| T |
30368124 |
ttgattgcactgataagctcaaaaggtacagtaggatacaacctcatggattcacatatagctccatggaggtagactagcttatcaaggctttccacca |
30368025 |
T |
|
| Q |
429 |
tcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaa |
528 |
Q |
| |
|
| | | |||| ||| || | || || || ||||||||||||||||||||||| ||||| ||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
30368024 |
ttgaagttatccaattctcatgttttgatacacaattatctttgatctcttgaataattttggcttccacaataggatgagttgaaacaagccagaaaaa |
30367925 |
T |
|
| Q |
529 |
ccaactgagagctgaactaa |
548 |
Q |
| |
|
|||||||||| |||||||| |
|
|
| T |
30367924 |
ccaactgagacttgaactaa |
30367905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 32 - 551
Target Start/End: Complemental strand, 13244834 - 13244312
Alignment:
| Q |
32 |
gttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaa |
131 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |||||||| |||||| ||||| |||||||||| ||| ||||||||||| || |||||| |
|
|
| T |
13244834 |
gttacagggtgaccttccaccacctgtatgcgaaacttccataacaaagaagctgcaaccattttcatttgaacgaagctaagatctttcccaatacaac |
13244735 |
T |
|
| Q |
132 |
ttctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtc |
231 |
Q |
| |
|
|||| || || | ||||||||||||||||||||||| ||||||| |||||| |||| || | ||||||||||| |||||||||||||||| ||| || |
|
|
| T |
13244734 |
ttctaggacctgcattgaaagctatgaacttgtaagacggtacatttataatccctcctctagctgatatccatctttcaggcttaaattccaagcaatc |
13244635 |
T |
|
| Q |
232 |
ttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagtatatcggatttg |
331 |
Q |
| |
|
|| ||||||| ||||| |||||| ||||| | ||||| ||| || || || ||||||||||| || | | |||||||||||||||||||| |||||| |
|
|
| T |
13244634 |
atctccccatatttgttgcatccttcccattgcatacaaagaatatatcaactttgtatttggaccaacatgttctccactaggtagtatatcagatttg |
13244535 |
T |
|
| Q |
332 |
attgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaagaaccacatccctca |
431 |
Q |
| |
|
|| || || | |||| ||| | | ||||||||| ||||| |||||||||||||| |||||||| ||||| || |||||||||| | | | | |
|
|
| T |
13244534 |
atagcgcacttgtgctgaaatgccagaggaggatatagcctcaaggtttcacatatggctccatgaaggtaaacaagcttatcaatcttttccacgttta |
13244435 |
T |
|
| Q |
432 |
agata---atccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaa |
528 |
Q |
| |
|
| || || ||| |||||||||||||| ||||||||||||||||||||||| ||||| ||||| ||||||||| |||||||| ||||| || || |
|
|
| T |
13244434 |
aattattgattaaattctcctcttgtgttagacaattatctttgatctcttgaataattttcgcttccccaataggatgagttgaaacaagccaaaagaa |
13244335 |
T |
|
| Q |
529 |
ccaactgagagctgaactaattg |
551 |
Q |
| |
|
|||||| ||| |||||||||||| |
|
|
| T |
13244334 |
ccaacttagacctgaactaattg |
13244312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 40 - 417
Target Start/End: Complemental strand, 19279473 - 19279096
Alignment:
| Q |
40 |
gtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggt |
139 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||| ||| | ||||||||| ||||| |||||||||| |||| ||| |||||| || | ||| |||| || |
|
|
| T |
19279473 |
gtgaccttccacgacctgtatgcgaaacttccataatacagcagctgcaaccattttcatttgaaggaaagtaatatcttttccgagacagcttctcgga |
19279374 |
T |
|
| Q |
140 |
ccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttcccccc |
239 |
Q |
| |
|
|| | || || |||||||||||||| ||||||||||||||||| | ||| || || |||||||||||||||||| |||||| | ||| || || |||| |
|
|
| T |
19279373 |
cctgcattaaacgctatgaacttgtacgatggtacatgtataatttgtcctctatccgatatccatctctcaggccgaaattctaggcaatcatcacccc |
19279274 |
T |
|
| Q |
240 |
atagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagtatatcggatttgattgcaca |
339 |
Q |
| |
|
||| |||||||||||| ||||| | ||||| |||||| ||||| ||||||| |||||| | | ||||||||||||||||||||||| || | |||||| |
|
|
| T |
19279273 |
atatttgttccatccttcccattgcatacaaagagtatattaactttgtatttagactaacatggtctccactaggtagtatatcggaattaactgcaca |
19279174 |
T |
|
| Q |
340 |
gatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
417 |
Q |
| |
|
| || ||||| |||| ||| |||||||||||||||| |||||||||||||||||| || || |||||||||||||| |
|
|
| T |
19279173 |
cttgtgttcaaatggtacaggtggataaagccttaaggcttcacatatagctccatgaagataaactagcttatcaag |
19279096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 40 - 417
Target Start/End: Complemental strand, 12964180 - 12963803
Alignment:
| Q |
40 |
gtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggt |
139 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||| | ||| || ||||| |||||||||| || |||| |||||| || |||||| |||| || |
|
|
| T |
12964180 |
gtgaccttccaccacttctatgtgaaacttccacaacacattagcagcaaccattttcatttgaacaaagctaatatctttcccaatacaacttctagga |
12964081 |
T |
|
| Q |
140 |
ccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttcccccc |
239 |
Q |
| |
|
|| | ||||| ||||||||||| |||||||| || |||||||| ||||| || | ||||||||||| |||||||||||||||| ||| ||||| |||| |
|
|
| T |
12964080 |
cctgcattgaatgctatgaacttataagatggcacttgtataatttctcctctatttgatatccatctttcaggcttaaattccaagcaatcttctcccc |
12963981 |
T |
|
| Q |
240 |
atagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagtatatcggatttgattgcaca |
339 |
Q |
| |
|
||| |||||||||||| ||||| | ||||| ||| || || || |||||||||||||| | | ||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
12963980 |
atatttgttccatccttcccattgcatacaaagaatatatcaactttgtatttggactaacatggtctccactaggtaatatatctgatttaattgcaca |
12963881 |
T |
|
| Q |
340 |
gatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
417 |
Q |
| |
|
| || ||||| ||||||||||||||||||||||| | |||||| ||||||||||| || || || ||||||||||| |
|
|
| T |
12963880 |
cttgtgttcaaatggtataggaggataaagccttaaagcttcacaaatagctccatgaagataaacaagcttatcaag |
12963803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 41 - 548
Target Start/End: Original strand, 13271474 - 13271984
Alignment:
| Q |
41 |
tgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggtc |
140 |
Q |
| |
|
|||||||||||||| |||||||||||||||| ||| | || |||||| ||||| ||||||||||| || |||| |||||| || | ||| |||| || | |
|
|
| T |
13271474 |
tgaccttccaccacatgtatgtgaaacttccataatacagaagctgcaaccattttcatttgaataaagctaatatctttcccaagacagcttctaggac |
13271573 |
T |
|
| Q |
141 |
cagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttcccccca |
240 |
Q |
| |
|
| | ||||| |||||||||||||||||||||||||||||||| | ||| | || ||||||||||||||||||||||| |||| ||| || | ||||| |
|
|
| T |
13271574 |
ctgcattgaatgctatgaacttgtaagatggtacatgtataatttgtcctttatctgatatccatctctcaggcttaaactccaagcaatcaccacccca |
13271673 |
T |
|
| Q |
241 |
tagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagtatatcggatttgattgcacag |
340 |
Q |
| |
|
|| |||||||| || ||||| | ||||| |||||| ||||| ||| ||||||| || | | | |||||||||||||||||| || || | |||||| |
|
|
| T |
13271674 |
tacatgttccattcttcccattgcatacaaagagtatattaactttgtgtttggaccaacatggtgtccactaggtagtatatcagaattaactgcacac |
13271773 |
T |
|
| Q |
341 |
atatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaagaaccacatccctcaagata---a |
437 |
Q |
| |
|
| || ||||| ||||||||||||||||| || |||||||||||||||||| |||| ||||| | |||||||||| || | | || || | |
|
|
| T |
13271774 |
ttgtgatcaaatggtataggaggataaagtctcaaggtttcacatatagctgcatgaaggtaaatcagcttatcaatgttttcaacatttaaattattga |
13271873 |
T |
|
| Q |
438 |
tccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaaccaactgag |
537 |
Q |
| |
|
|| ||| |||||||||||||| |||| |||||||||||||||||| | |||| |||||||| |||||| |||||||| ||||| || |||||||| || |
|
|
| T |
13271874 |
tcaaattctcctcttgtgttagacaatgatctttgatctcttgaataagttttgcttccacattaggatgagttgaaacaagccaaaagaaccaacttag |
13271973 |
T |
|
| Q |
538 |
agctgaactaa |
548 |
Q |
| |
|
| ||||||||| |
|
|
| T |
13271974 |
acctgaactaa |
13271984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 19 - 417
Target Start/End: Complemental strand, 13065539 - 13065141
Alignment:
| Q |
19 |
agaaagccttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatct |
118 |
Q |
| |
|
|||||||||||| |||||||| ||||| ||||| | |||||| |||||||| || | ||| || || |||||||||||| || ||| | | |||| |
|
|
| T |
13065539 |
agaaagccttggagttacaggatgaccatccactaaatgtatgcaaaacttccatagtatagccgcggcagccatcttcatttcaacgaaggtgatatct |
13065440 |
T |
|
| Q |
119 |
ttacctatacaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaa |
218 |
Q |
| |
|
||||| | |||| |||| || || | ||||||||||||||||||||||| |||||||||||||| | ||| || | |||||||||||||||||||||| |
|
|
| T |
13065439 |
ttacccaaacaacttcttggccctgcattgaaagctatgaacttgtaagacggtacatgtataatttgtccgctttttgatatccatctctcaggcttaa |
13065340 |
T |
|
| Q |
219 |
attccatgcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtag |
318 |
Q |
| |
|
|||||||||||||||| ||||||| || |||||||| ||||| ||||||| | |||| | || | |||||||||||| | | | |||||||||| || |
|
|
| T |
13065339 |
attccatgcagtcttctccccatattttctccatccttcccattgaatacaaatagtataatatccttgtatttggacttacatggactccactaggaag |
13065240 |
T |
|
| Q |
319 |
tatatcggatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
417 |
Q |
| |
|
|||||| | |||||||||| | | ||||| | ||||| |||||||||||||||||||| ||||||||||||||| |||||||| | ||| |||||||| |
|
|
| T |
13065239 |
tatatcagctttgattgcaaacttttgctcgataggtacaggaggataaagccttaaggcttcacatatagctccgtggaggtaaattagtttatcaag |
13065141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 40 - 417
Target Start/End: Complemental strand, 13081170 - 13080793
Alignment:
| Q |
40 |
gtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttacctatacaaattctgggt |
139 |
Q |
| |
|
|||||||||||||||||| ||||||||||| ||| | |||||||| ||||| |||||||||| ||||||| |||||| || | ||| |||| || |
|
|
| T |
13081170 |
gtgaccttccaccacctgaatgtgaaacttaaataaaactgcagctgcaaccattttcatttgaagaaaactaatatctttcccaagacagcttcttgga |
13081071 |
T |
|
| Q |
140 |
ccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccatgcagtcttcccccc |
239 |
Q |
| |
|
|| | || || ||||||||||| ||||| || || |||||||| | ||| || || ||||||||||||||||||||||| |||| ||| || || |||| |
|
|
| T |
13081070 |
cctgcattaaacgctatgaacttataagacggcacttgtataatttgtcctctatctgatatccatctctcaggcttaaactccaagcaatcctctcccc |
13080971 |
T |
|
| Q |
240 |
atagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagtatatcggatttgattgcaca |
339 |
Q |
| |
|
||| ||| |||||||| ||||| | ||||| ||| || ||||| |||||||||||||| | | ||||||||||| ||| |||| |||||||| ||||| |
|
|
| T |
13080970 |
atatttgctccatccttcccattgcatacaaagaatatattaactttgtatttggactaacatggtctccactaggaagtttatccgatttgatagcaca |
13080871 |
T |
|
| Q |
340 |
gatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatcaag |
417 |
Q |
| |
|
| |||| ||| | || || |||||| |||||||||| ||||||||| |||||||| ||||| |||||||||||||| |
|
|
| T |
13080870 |
cttgtgctgaaatgctacagaaggatatagccttaaggcttcacatatggctccatgaaggtaaactagcttatcaag |
13080793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 26 - 413
Target Start/End: Original strand, 13085980 - 13086367
Alignment:
| Q |
26 |
cttggggttacagggtgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctttaccta |
125 |
Q |
| |
|
||||| ||||||| ||||||||||| || |||||||||||||||| ||||| ||||||||| ||||| |||||||||| | |||| |||||| || | |
|
|
| T |
13085980 |
cttggagttacagaatgaccttccacaacttgtatgtgaaacttccataacatagcagctgcaaccattttcatttgaacaatgctaatatctttcccaa |
13086079 |
T |
|
| Q |
126 |
tacaaattctgggtccagtgttgaaagctatgaacttgtaagatggtacatgtataatatctcccctctcagatatccatctctcaggcttaaattccat |
225 |
Q |
| |
|
|||| ||| || || | || || |||||||||||| ||||||||||||| | ||||| ||| | || |||||||||||||| ||||||||||| | |
|
|
| T |
13086080 |
gacaacttcgaggacctgcattaaatgctatgaacttgcaagatggtacatgcaaaatatgtcctttatctgatatccatctctcgggcttaaattcgaa |
13086179 |
T |
|
| Q |
226 |
gcagtcttccccccatagttgttccatcctgcccatagaatacatagagtacattaaacgtgtatttggactaatacgctctccactaggtagtatatcg |
325 |
Q |
| |
|
|| || | ||||||| ||||| |||||| ||||| | ||||| |||||| ||||| |||||||| ||| | |||||||||||||||||||| |
|
|
| T |
13086180 |
gcgatccttaccccatatttgtttcatccttcccattgcatacaaagagtatattaacttagtatttggtttaacataatctccactaggtagtatatca |
13086279 |
T |
|
| Q |
326 |
gatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttat |
413 |
Q |
| |
|
| |||||||||||| | |||| ||| |||| ||||||||||||||| || | |||||||||||||||||| ||||| ||||| |||| |
|
|
| T |
13086280 |
gctttgattgcacacttgtgctgaaatggtacaggaggataaagcctcaatgcttcacatatagctccatgaaggtacactagtttat |
13086367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 316 - 548
Target Start/End: Original strand, 19727316 - 19727548
Alignment:
| Q |
316 |
tagtatatcggatttgattgcacagatatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatggaggtatactagcttatca |
415 |
Q |
| |
|
|||||||| |||||||||||||| |||||||||||||||| |||||||||||| || |||| || ||||| | |||| |||||||| |||||||||||| |
|
|
| T |
19727316 |
tagtatatgagatttgattgcacatatatgctcaaaaggtacaggaggataaagtctcaaggcttaacatagatctccgtggaggtacactagcttatca |
19727415 |
T |
|
| Q |
416 |
agaaccacatccctcaagataatccgattatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaa |
515 |
Q |
| |
|
||| ||||||| ||||| | || | || ||||||||||| |||| ||||||||||| |||||||| ||||| |||| |||||||||| ||| |||| |
|
|
| T |
19727416 |
agatccacatctctcaaaggagtctggttctcctcttgtgtgggccagttatctttgatttcttgaataattttggcttcgacaataggatgagtcgaaa |
19727515 |
T |
|
| Q |
516 |
ggagccagaaaaaccaactgagagctgaactaa |
548 |
Q |
| |
|
||||| ||||||||||||||| ||| ||||| |
|
|
| T |
19727516 |
caagccaaaaaaaccaactgagacctgtactaa |
19727548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 119
Target Start/End: Original strand, 13010661 - 13010739
Alignment:
| Q |
41 |
tgaccttccaccacctgtatgtgaaacttccgtaacaaagcagctgcgaccatcttcatttgaatgaaactaagatctt |
119 |
Q |
| |
|
|||||||||||||| |||||| |||| |||| ||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
13010661 |
tgaccttccaccacttgtatgcgaaatttccataacaaatcagctgcgaccatcttcattagaatgaaactaagatctt |
13010739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 442 - 551
Target Start/End: Complemental strand, 19279068 - 19278959
Alignment:
| Q |
442 |
attatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaaccaactgagagct |
541 |
Q |
| |
|
||||||||||| ||||| || ||| | |||||||||||||| |||||| |||| |||||||||| |||||| | |||||| || |||||| ||||| | |
|
|
| T |
19279068 |
attatcctcttttgttaaacagttaaccttgatctcttgaataatttttgcttcgacaataggatgagttgatacgagccaaaagaaccaattgagaccc |
19278969 |
T |
|
| Q |
542 |
gaactaattg |
551 |
Q |
| |
|
|||||||||| |
|
|
| T |
19278968 |
gaactaattg |
19278959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 462 - 548
Target Start/End: Complemental strand, 12963791 - 12963705
Alignment:
| Q |
462 |
aattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaaccaactgagagctgaactaa |
548 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||||||||| |||||||| ||||| || |||||||| ||| ||||||||| |
|
|
| T |
12963791 |
aattatctttaatctcttgaataattttagtttccacaataggatgagttgaaacaagccaaaagaaccaacttagacctgaactaa |
12963705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 466 - 545
Target Start/End: Original strand, 13214132 - 13214211
Alignment:
| Q |
466 |
atctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaaccaactgagagctgaac |
545 |
Q |
| |
|
|||||| || |||||||| ||||| ||||||||||| ||| |||||||| ||||||||||||||| ||||| |||||| |
|
|
| T |
13214132 |
atcttttatttcttgaataattttagcttccacaataagatgagttgaaacaagccagaaaaaccaaatgagacctgaac |
13214211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 461 - 548
Target Start/End: Complemental strand, 13065097 - 13065010
Alignment:
| Q |
461 |
caattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaaccaactgagagctgaactaa |
548 |
Q |
| |
|
||||||||||| ||||||||||| || || ||||||||| ||||| | ||||| ||||| || |||||||||||| ||||||||| |
|
|
| T |
13065097 |
caattatctttcatctcttgaataatcttggcttccacaacaggatgacatgaaacaagccaaaagaaccaactgagacctgaactaa |
13065010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 461 - 551
Target Start/End: Complemental strand, 13080746 - 13080656
Alignment:
| Q |
461 |
caattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaaccaactgagagctgaactaattg |
551 |
Q |
| |
|
||||||||||||||||||||||| ||||| | || || |||||| ||||||| ||||| ||||||||| ||||| ||| |||||||| |
|
|
| T |
13080746 |
caattatctttgatctcttgaataattttaccatctaccctaggatgcgttgaaaccagccaaaaaaaccaagtgagacctgtactaattg |
13080656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 442 - 548
Target Start/End: Original strand, 13086399 - 13086505
Alignment:
| Q |
442 |
attatcctcttgtgttagccaattatctttgatctcttgaatgattttttcttccacaataggataagttgaaaggagccagaaaaaccaactgagagct |
541 |
Q |
| |
|
||||||||| |||| ||| ||||||||||| ||||||||||| ||||| ||||||| || || |||||||| ||||| | |||||||| ||| || |
|
|
| T |
13086399 |
attatcctcatgtgatagacaattatcttttatctcttgaattattttagcttccactatgaaatgagttgaaacaagccaagagaaccaacttagacct |
13086498 |
T |
|
| Q |
542 |
gaactaa |
548 |
Q |
| |
|
||||||| |
|
|
| T |
13086499 |
gaactaa |
13086505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 31380325 - 31380253
Alignment:
| Q |
91 |
catcttcatttgaatgaaactaagatctttacctatacaaattctgggtccagtgttgaaagctatgaacttg |
163 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||| ||| |||||| || ||||||| |||||||||| |
|
|
| T |
31380325 |
catcttaatttgaatgaaactaagatctttaccaatacaacttccgggtcctgtattgaaagatatgaacttg |
31380253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 464 - 551
Target Start/End: Complemental strand, 31396557 - 31396469
Alignment:
| Q |
464 |
ttatctttgatctcttgaatgattttttcttccacaataggataagttg-aaaggagccagaaaaaccaactgagagctgaactaattg |
551 |
Q |
| |
|
||||||| ||||||||||| ||||| |||||||| |||||| ||||| ||| |||||||||||||||| |||| ||||||||||| |
|
|
| T |
31396557 |
ttatcttgaatctcttgaataattttggcttccacattaggatgagttgaaaacaagccagaaaaaccaaccgagacttgaactaattg |
31396469 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 342 - 396
Target Start/End: Original strand, 36668314 - 36668368
Alignment:
| Q |
342 |
tatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatg |
396 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||| |||||||| ||||||||| |
|
|
| T |
36668314 |
tatgctcaaaaggtattggtggataaagccttaaggcttcacataaagctccatg |
36668368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 342 - 396
Target Start/End: Original strand, 12164462 - 12164516
Alignment:
| Q |
342 |
tatgctcaaaaggtataggaggataaagccttaaggtttcacatatagctccatg |
396 |
Q |
| |
|
|||||||||||||||| || ||||||||||| |||| |||||||| ||||||||| |
|
|
| T |
12164462 |
tatgctcaaaaggtatcggcggataaagcctcaaggcttcacataaagctccatg |
12164516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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