View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15918_low_17 (Length: 204)
Name: NF15918_low_17
Description: NF15918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15918_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 68 - 189
Target Start/End: Complemental strand, 33840649 - 33840528
Alignment:
| Q |
68 |
gctgttgttaaaaatggcattcataaccgccacagtatgcaaccaccttaaaaactgtcgtcggttccttctgccatcaattgttacaagtgttaacggt |
167 |
Q |
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| T |
33840649 |
gctgttgtttaaaattgcattcataaccgccacagtatgcaaccaccttaaaaactgtcgtcggtttcttctgccatcaattgttacaagtgttaacggt |
33840550 |
T |
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| Q |
168 |
agtgaaatgcagtgcacaatac |
189 |
Q |
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||||||||| |||||||||||| |
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| T |
33840549 |
agtgaaatgtagtgcacaatac |
33840528 |
T |
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