View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15918_low_7 (Length: 325)

Name: NF15918_low_7
Description: NF15918
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15918_low_7
NF15918_low_7
[»] chr6 (62 HSPs)
chr6 (2-316)||(26647773-26648094)
chr6 (2-316)||(26753741-26754062)
chr6 (93-314)||(26803742-26803970)
chr6 (95-316)||(28787532-28787760)
chr6 (95-316)||(28793653-28793881)
chr6 (6-316)||(31285853-31286176)
chr6 (96-316)||(27603365-27603592)
chr6 (2-316)||(26624565-26624886)
chr6 (2-316)||(26730542-26730863)
chr6 (2-312)||(27717057-27717383)
chr6 (2-316)||(27697147-27697474)
chr6 (2-316)||(27704821-27705142)
chr6 (20-298)||(27215764-27216055)
chr6 (95-310)||(26885367-26885589)
chr6 (95-316)||(27680244-27680472)
chr6 (91-310)||(26825119-26825345)
chr6 (2-312)||(27609678-27610004)
chr6 (6-300)||(26862890-26863191)
chr6 (20-263)||(26144222-26144471)
chr6 (20-263)||(26057276-26057525)
chr6 (20-263)||(26077246-26077495)
chr6 (20-302)||(27529883-27530178)
chr6 (91-311)||(26657261-26657488)
chr6 (91-311)||(26763232-26763459)
chr6 (130-316)||(27426307-27426500)
chr6 (87-316)||(25512185-25512421)
chr6 (87-316)||(25581016-25581252)
chr6 (20-316)||(25484353-25484662)
chr6 (135-316)||(25492019-25492207)
chr6 (92-264)||(27663872-27664043)
chr6 (2-75)||(27680513-27680586)
chr6 (92-262)||(29842649-29842819)
chr6 (141-267)||(28296446-28296572)
chr6 (141-267)||(28515501-28515627)
chr6 (92-262)||(29827341-29827511)
chr6 (92-264)||(26938382-26938554)
chr6 (182-264)||(27591768-27591850)
chr6 (182-264)||(27676367-27676449)
chr6 (141-267)||(28186744-28186870)
chr6 (141-263)||(28326832-28326954)
chr6 (141-263)||(28504468-28504590)
chr6 (184-265)||(28244147-28244228)
chr6 (2-75)||(28787804-28787877)
chr6 (2-75)||(28793925-28793998)
chr6 (4-64)||(26804020-26804080)
chr6 (2-66)||(27603253-27603317)
chr6 (2-73)||(26637193-26637264)
chr6 (2-73)||(26743159-26743230)
chr6 (197-264)||(26978733-26978800)
chr6 (1-73)||(26850277-26850349)
chr6 (3-75)||(28141089-28141161)
chr6 (197-264)||(26960478-26960545)
chr6 (1-80)||(26960671-26960750)
chr6 (2-73)||(27591573-27591644)
chr6 (2-73)||(27676172-27676243)
chr6 (2-64)||(27663761-27663823)
chr6 (1-74)||(2186369-2186442)
chr6 (6-75)||(26825376-26825445)
chr6 (192-245)||(28240725-28240778)
chr6 (1-74)||(29827541-29827614)
chr6 (20-64)||(25546542-25546586)
chr6 (184-264)||(28140888-28140968)
[»] scaffold1870 (1 HSPs)
scaffold1870 (95-316)||(63-291)
[»] scaffold0277 (4 HSPs)
scaffold0277 (95-316)||(3372-3600)
scaffold0277 (95-316)||(12335-12563)
scaffold0277 (2-64)||(3261-3323)
scaffold0277 (2-64)||(12224-12286)
[»] scaffold0419 (1 HSPs)
scaffold0419 (95-316)||(8781-9009)
[»] chr1 (7 HSPs)
chr1 (2-316)||(266907-267228)
chr1 (93-316)||(28126333-28126563)
chr1 (91-316)||(28132157-28132389)
chr1 (186-262)||(26137243-26137319)
chr1 (1-68)||(26137440-26137507)
chr1 (2-75)||(28126242-28126315)
chr1 (184-250)||(5922218-5922284)
[»] chr8 (3 HSPs)
chr8 (83-316)||(29272486-29272726)
chr8 (196-264)||(35984652-35984720)
chr8 (2-67)||(29272396-29272461)
[»] scaffold0349 (1 HSPs)
scaffold0349 (2-312)||(2097-2423)
[»] scaffold0003 (1 HSPs)
scaffold0003 (130-316)||(60863-61056)
[»] chr4 (7 HSPs)
chr4 (130-316)||(18075055-18075248)
chr4 (182-264)||(18688369-18688451)
chr4 (182-264)||(18698143-18698225)
chr4 (182-264)||(18730247-18730329)
chr4 (182-264)||(18678303-18678385)
chr4 (182-264)||(18722828-18722910)
chr4 (182-264)||(18654220-18654302)
[»] chr2 (2 HSPs)
chr2 (186-264)||(3281012-3281090)
chr2 (187-252)||(17991967-17992032)
[»] scaffold0038 (2 HSPs)
scaffold0038 (184-265)||(44309-44390)
scaffold0038 (192-245)||(40887-40940)
[»] scaffold0019 (1 HSPs)
scaffold0019 (228-267)||(57087-57126)
[»] chr5 (1 HSPs)
chr5 (184-262)||(16692222-16692300)
[»] scaffold0012 (1 HSPs)
scaffold0012 (184-252)||(238614-238682)


Alignment Details
Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 2 - 316
Target Start/End: Complemental strand, 26648094 - 26647773
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggcctatgagagat 101  Q
    ||||||||||||||||| |||||||||||| |||||  ||||||| ||||||||||||||||| ||||||| || ||||| || ||||   |||||||||    
T  26648094 tccaggctctttacgtgattcttgtcggactacttccttacccatgtcctttatcaagtcatgtaatctcagataaccatgattttggtaaatgagagat 26647995  T
Q  102 ttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaag 201  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  26647994 ttttcagccaacactccaagatgatgtgttatgcaatggccataatgataacgaagtatatcttcaaactcctcccatctacatcctttgaagcaacaag 26647895  T
Q  202 caatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatc 294  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||    
T  26647894 caatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaatcttttcatatccatc 26647795  T
Q  295 taatgtacccttccattcttct 316  Q
    ||||||||||||||||||||||    
T  26647794 taatgtacccttccattcttct 26647773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 2 - 316
Target Start/End: Complemental strand, 26754062 - 26753741
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggcctatgagagat 101  Q
    ||||||||||||||||| |||||||||||| |||||  ||||||| ||||||||||||||||| ||||||| || ||||| || ||||   |||||||||    
T  26754062 tccaggctctttacgtgattcttgtcggactacttccttacccatgtcctttatcaagtcatgtaatctcagataaccatgattttggtaaatgagagat 26753963  T
Q  102 ttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaag 201  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  26753962 ttttcagccaacactccaagatgatgtgttatgcaatggccataatgataacgaagtatatcttcaaactcctcccatctacatcctttgaagcaacaag 26753863  T
Q  202 caatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatc 294  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||||    
T  26753862 caatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaatcttttcatatccatc 26753763  T
Q  295 taatgtacccttccattcttct 316  Q
    ||||||||||||||||||||||    
T  26753762 taatgtacccttccattcttct 26753741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 93 - 314
Target Start/End: Complemental strand, 26803970 - 26803742
Alignment:
Q  93 atgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttga 192  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||    
T  26803970 atgagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgaacatgaagtatatcttcaaactcctcccatccacatcctttga 26803871  T
Q  193 agcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttc 285  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||    
T  26803870 agcaacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaatcttttc 26803771  T
Q  286 atatccatctaatgtacccttccattctt 314  Q
    |||||||||||||||||||||||||||||    
T  26803770 atatccatctaatgtacccttccattctt 26803742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 95 - 316
Target Start/End: Complemental strand, 28787760 - 28787532
Alignment:
Q  95 gagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaag 194  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  28787760 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctcccactcacatcctttgaag 28787661  T
Q  195 caacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcat 287  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||    
T  28787660 caacatgcaatgtctagaaaaacactttgttgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaatcttttcat 28787561  T
Q  288 atccatctaatgtacccttccattcttct 316  Q
    |||||||||| ||||||||||||||||||    
T  28787560 atccatctaaagtacccttccattcttct 28787532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 95 - 316
Target Start/End: Complemental strand, 28793881 - 28793653
Alignment:
Q  95 gagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaag 194  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||    
T  28793881 gagagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaactcctcccactcacatcctttgaag 28793782  T
Q  195 caacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcat 287  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||    
T  28793781 caacatgcaatgtctagaaaaacactttgttgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaatcttttcat 28793682  T
Q  288 atccatctaatgtacccttccattcttct 316  Q
    |||||||||| ||||||||||||||||||    
T  28793681 atccatctaaagtacccttccattcttct 28793653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 6 - 316
Target Start/End: Complemental strand, 31286176 - 31285853
Alignment:
Q  6 ggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatatt------ggcctatgagag 99  Q
    ||||||||| ||| |||||||||||| |||||| ||||||| |||| |||||||||||| |||| ||||  |||||||||||      || |||||||||    
T  31286176 ggctctttaggtgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatcccacacaaccatcatattcccaacggtctatgagag 31286077  T
Q  100 atttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaaca 199  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||||| || | ||||||||||| |  ||| ||||| | |||||||||||||||||    
T  31286076 atttttcagccaacacttctagatgatgtgttatgcaatggccataatgagcatggagtatatctttgacatccgcccatccgcatcctttgaagcaaca 31285977  T
Q  200 agcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatcca 292  Q
    ||||||||| ||||||||||| || | |||||| ||||||||||||||||||||| ||||||||       ||| ||||||||||||||| ||||| |||    
T  31285976 agcaatgtccagaaagacactctgctcctcttcttccaaagcatcatagcttactttaagtatcttttggatctctttattgggaatcttgtcataccca 31285877  T
Q  293 tctaatgtacccttccattcttct 316  Q
    |||||||||| |||||||| ||||    
T  31285876 tctaatgtactcttccatttttct 31285853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 96 - 316
Target Start/End: Original strand, 27603365 - 27603592
Alignment:
Q  96 agagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagc 195  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| || | | ||| || |||||||||||||||    
T  27603365 agagatttttcagccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagtatatcttcaaccacttccaatccacatcctttgaagc 27603464  T
Q  196 aacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcata 288  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||       ||||||||||||||||||| |||||    
T  27603465 aacaagcaatgtctagaaagacactctgctgctcttcctccaaagcatcatagcttactttaagaatctcgtggatctttttattgggaatcttctcata 27603564  T
Q  289 tccatctaatgtacccttccattcttct 316  Q
    ||| ||||| ||||||||||||||||||    
T  27603565 tccttctaacgtacccttccattcttct 27603592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 2 - 316
Target Start/End: Complemental strand, 26624886 - 26624565
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggcctatgagagat 101  Q
    ||||||||||||| ||| |||||||||||| | | || ||||||| |||| |||||||||||| ||  ||| || ||||| | ||||   ||||||| ||    
T  26624886 tccaggctctttaggtgattcttgtcggacgattgctttacccatgtcctctatcaagtcatgtaaggtcatatcaccataagattgatatatgagacat 26624787  T
Q  102 ttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaag 201  Q
    || ||  ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||  ||||||  |||| ||||||||||  |||||||||    
T  26624786 ttgtcaaccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagcatatcttcgaactccctccatccacatcctttcgagcaacaag 26624687  T
Q  202 caatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatc 294  Q
    |||| |||||||||||||| || | |||||| ||||||||||||||||| ||| ||||||||       ||| ||||||||||||| | ||||| |||||    
T  26624686 caatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtatcttttggatctctttattgggaatcctgtcatacccatc 26624587  T
Q  295 taatgtacccttccattcttct 316  Q
    |||||||  |||||||||||||    
T  26624586 taatgtatacttccattcttct 26624565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 2 - 316
Target Start/End: Complemental strand, 26730863 - 26730542
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggcctatgagagat 101  Q
    ||||||||||||| ||| |||||||||||| | | || ||||||| |||| |||||||||||| ||  ||| || ||||| | ||||   ||||||| ||    
T  26730863 tccaggctctttaggtgattcttgtcggacgattgctttacccatgtcctctatcaagtcatgtaaggtcatatcaccataagattgatatatgagacat 26730764  T
Q  102 ttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaag 201  Q
    || ||  ||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||  ||||||  |||| ||||||||||  |||||||||    
T  26730763 ttgtcaaccaacactcctagatgatgtgttatgcaatggccataatgagcacgaagcatatcttcgaactccctccatccacatcctttcgagcaacaag 26730664  T
Q  202 caatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatc 294  Q
    |||| |||||||||||||| || | |||||| ||||||||||||||||| ||| ||||||||       ||| ||||||||||||| | ||||| |||||    
T  26730663 caatatctagaaagacactctgctcctcttcttccaaagcatcatagctcactttaagtatcttttggatctctttattgggaatcctgtcatacccatc 26730564  T
Q  295 taatgtacccttccattcttct 316  Q
    |||||||  |||||||||||||    
T  26730563 taatgtatacttccattcttct 26730542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 2 - 312
Target Start/End: Original strand, 27717057 - 27717383
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggccta-------- 93  Q
    |||||||||||||  || |||||||||||| |||||| ||||||| |||| |||||||||||| ||  |||||| | | |||||||  | ||            
T  27717057 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgtcatattcccgtaatttcttt 27717156  T
Q  94 -tgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttga 192  Q
     |||||||||||||  ||||||||||||||||||||||||| |||||||||||||||  |  |||||||| |||    || ||||||| ||||| |||||    
T  27717157 atgagagatttttcaaccaacactcctagatgatgtgttatgcaatggccataatgagaattaagtatatatttggcatcttcccatttacatcttttga 27717256  T
Q  193 agcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttc 285  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||       ||| ||||||||||||| | ||    
T  27717257 agcaacaagcaatgtctagaaagacactttgctgctcttcctccaaagcatcataacttactttaagtatcttttggatctctttattgggaatcctgtc 27717356  T
Q  286 atatccatctaatgtacccttccattc 312  Q
    ||| ||||||||||||  |||||||||    
T  27717357 atacccatctaatgtattcttccattc 27717383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 2 - 316
Target Start/End: Original strand, 27697147 - 27697474
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatc------atattggcctatg 95  Q
    |||||||||||||  || |||||||||||| |||||| ||||||| |||| |||||||||||| ||| |||||  |||||       |||||||  ||||    
T  27697147 tccaggctctttagttgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatgtcacacaaccatattccctatattggtttatg 27697246  T
Q  96 agagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagc 195  Q
    ||||||||||| ||||||||| ||||||||||||||||  |||||||||||||| || |||| |||| |||    || |||||| ||  |||||||||||    
T  27697247 agagatttttcagccaacactgctagatgatgtgttatggaatggccataatgagcatgaagcatatatttggcatcttcccatccatgtcctttgaagc 27697346  T
Q  196 aacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcata 288  Q
    ||||||||||||| |||||||||||||| | |||||| ||||||||||||||||| ||| ||||||||       ||| ||||||||||||| | |||||    
T  27697347 aacaagcaatgtccagaaagacactttgctcctcttcttccaaagcatcatagctcactctaagtatcttttggatctctttattgggaatcctgtcata 27697446  T
Q  289 tccatctaatgtacccttccattcttct 316  Q
     ||||||||| ||  |||||||||||||    
T  27697447 cccatctaatatatacttccattcttct 27697474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 2 - 316
Target Start/End: Original strand, 27704821 - 27705142
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggcctatgagagat 101  Q
    |||||||||||||  || |||||||||||| |||||| |||||||||||| |||||||| ||| ||| |||||| || || || |  | ||||||| ||     
T  27704821 tccaggctctttaattgattcttgtcggacgacttctttacccatatcctctatcaagttatgtaatgtcacataacaataatttgtgtctatgagtgac 27704920  T
Q  102 ttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaag 201  Q
    ||||| |||||||||| |||||||||||||||||||||| ||||||||  | ||||||||| || || |||   | ||  | | ||||| ||||||||||    
T  27704921 ttttcagccaacactcgtagatgatgtgttatacaatggtcataatgagaatgaagtatattttcaacctctgtcaatctatacccttttaagcaacaag 27705020  T
Q  202 caatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatc 294  Q
    ||||||| ||||||||||| || | |||||| ||||||||||||||||| ||| ||||||||       ||| ||||||||||||| | ||||| |||||    
T  27705021 caatgtcaagaaagacactctgctcctcttcttccaaagcatcatagctcactctaagtatcttttggatctctttattgggaatcctgtcatacccatc 27705120  T
Q  295 taatgtacccttccattcttct 316  Q
    |||||||  |||||||||||||    
T  27705121 taatgtattcttccattcttct 27705142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 298
Target Start/End: Complemental strand, 27216055 - 27215764
Alignment:
Q  20 ttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatatt------ggcctatgagagatttttcggccaac 113  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||| || || ||||| ||      ||   |||||||||||||||||||||    
T  27216055 ttcttgtcggacaacttctctacccatatcctctatcaagtcatgtaatctcatataactatcattttcccggtggttaatgagagatttttcggccaac 27215956  T
Q  114 actcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaa 213  Q
    ||| | | ||||||| |||| ||||||||||||||  || ||||||||||||| | ||    ||||| ||| ||||||||||||||||||||||||||||    
T  27215955 acttcaacatgatgttttatgcaatggccataatgggcatgaagtatatctttgacctttgtccatttacaccctttgaagcaacaagcaatgtctagaa 27215856  T
Q  214 agacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatctaat 298  Q
    ||||||| |  | || |||||||| |||||||||||| ||| ||||||||       ||| |||||||||||||||||||||  ||||||||    
T  27215855 agacactcttctccttttcctccagagcatcatagctgactttaagtatcctttggatctctttattgggaatcttttcatactcatctaat 27215764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 95 - 310
Target Start/End: Complemental strand, 26885589 - 26885367
Alignment:
Q  95 gagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaag 194  Q
    ||||||||||||| |||||||||| | ||||||| |||| ||||||||||||||| || ||||||||||||  | |||   ||||| ||| |||||||||    
T  26885589 gagagatttttcgaccaacactccaacatgatgttttatgcaatggccataatgagcatgaagtatatcttcgacctctgtccatttacaccctttgaag 26885490  T
Q  195 caacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcat 287  Q
    |||||||| || || |||||||||||||| | ||||||||| |||||||||||||||||| ||||||||       ||||| |||| |||||||||||||    
T  26885489 caacaagctatatccagaaagacactttgctcctcttcctctaaagcatcatagcttactttaagtatctcttggatctttgtattaggaatcttttcat 26885390  T
Q  288 atccatctaatgtacccttccat 310  Q
    ||||||||| ||||| |||||||    
T  26885389 atccatctagtgtactcttccat 26885367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 95 - 316
Target Start/End: Complemental strand, 27680472 - 27680244
Alignment:
Q  95 gagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaag 194  Q
    |||||||||| | |||||||||||||||||||||||||| |||||| |||||||| ||| |||||||||||  ||||||| ||||| | |||||||||||    
T  27680472 gagagattttccagccaacactcctagatgatgtgttatgcaatggtcataatgagcacaaagtatatcttcgaactccttccattgatatcctttgaag 27680373  T
Q  195 caacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcat 287  Q
    || ||||| ||||| ||||||||||| || | |||||| ||||||||||||||||| ||  ||||||||       ||| ||||||||||||| | ||||    
T  27680372 cagcaagcgatgtcaagaaagacactctgctcctcttcttccaaagcatcatagctcaccttaagtatcttttggatctctttattgggaatcctgtcat 27680273  T
Q  288 atccatctaatgtacccttccattcttct 316  Q
    | ||||||||||||  |||||| ||||||    
T  27680272 acccatctaatgtatgcttccaatcttct 27680244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 91 - 310
Target Start/End: Complemental strand, 26825345 - 26825119
Alignment:
Q  91 ctatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatccttt 190  Q
    |||||||||||||||| |||||||||   | ||||||| |||| |||||||| ||||||  ||||||||||||||  |||||||||||   |  | ||||    
T  26825345 ctatgagagatttttctgccaacacttgaacatgatgttttatgcaatggccgtaatgagtacgaagtatatcttcgaactcctcccaactatgttcttt 26825246  T
Q  191 gaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttt 283  Q
    |||||||||||||||||| || || ||||||||||||||||| ||||||||||||||||||||| ||||||||       ||||||| |  |||||| ||    
T  26825245 gaagcaacaagcaatgtcgaggaaaacactttgttgctcttcttccaaagcatcatagcttactctaagtatctcttggatctttttgtcaggaatcctt 26825146  T
Q  284 tcatatccatctaatgtacccttccat 310  Q
    |||||||||||||||| ||||||||||    
T  26825145 tcatatccatctaatgcacccttccat 26825119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 2 - 312
Target Start/End: Original strand, 27609678 - 27610004
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgacca------tc---atattggcct 92  Q
    |||||||||||||  || |||||||||||| |||||| ||||||| |||| |||||||||||| ||  |||||| | |       ||   ||||||| ||    
T  27609678 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgcgatattcccaatattggtct 27609777  T
Q  93 atgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatat-ctttaaactcctcccattcacatcctttg 191  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||  | ||||| ||| ||||  | || ||||| | | ||||||||    
T  27609778 atgagagatttttcagccaacactcctagatgatgtgttatggaatggccataatgagaatgaagtgtatactttgca-tcttcccaattatatcctttg 27609876  T
Q  192 aagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatctttt 284  Q
    ||||||||||||||||| |||||||||||||| | |||||| ||||||| ||||||||| ||| ||||||||       ||| ||||||||||||| | |    
T  27609877 aagcaacaagcaatgtccagaaagacactttgctcctcttcttccaaagaatcatagctcactttaagtatcttttggatctctttattgggaatcctgt 27609976  T
Q  285 catatccatctaatgtacccttccattc 312  Q
    |||| ||||||||||||  |||||||||    
T  27609977 catacccatctaatgtatacttccattc 27610004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 300
Target Start/End: Complemental strand, 26863191 - 26862890
Alignment:
Q  6 ggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggcctatgagagattttt 105  Q
    ||||||||| | | |||||||||||| | |||| | ||||| |||| |||||||||||| |||||||||  |  | ||||||||  ||||||||||||||    
T  26863191 ggctctttaggagattcttgtcggacgatttctttgcccatgtcctctatcaagtcatgtaatctcacactaagaccatattggtatatgagagattttt 26863092  T
Q  106 cggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaat 205  Q
    | ||||||||||| | ||||||| |||| ||  |||||||||||     |||||||||||  || ||   |||   ||  |||||||| |||||||||||    
T  26863091 cagccaacactccaacatgatgttttatgcatcggccataatgatatttaagtatatcttcgaattctatccagctaccccctttgaaacaacaagcaat 26862992  T
Q  206 gtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatctaat 298  Q
     ||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||       ||| ||||||||||||||||||||| |||||||||    
T  26862991 atctagaaagacactttgctgctcttcttccaaagcatcatagcttactttaagtatcctttggatctctttattgggaatcttttcatacccatctaat 26862892  T
Q  299 gt 300  Q
    ||    
T  26862891 gt 26862890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 263
Target Start/End: Complemental strand, 26144471 - 26144222
Alignment:
Q  20 ttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatatt------ggcctatgagagatttttcggccaac 113  Q
    |||||||||||| | |||| ||||||| |||| |||||||||||| ||  |||||| |   |||||||      ||||||||||||||||||| ||||||    
T  26144471 ttcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaatggcctatgagagatttttcagccaac 26144372  T
Q  114 actcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaa 213  Q
    ||||| | |||||||  ||| ||||||||||||||| || ||||||| | ||||| ||    ||||||||| ||||||||||||||||||||||||||||    
T  26144371 actccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaacctttgtccattcacaccctttgaagcaacaagcaatgtctagaa 26144272  T
Q  214 agacactttgttgctcttcctccaaagcatcatagcttactataagtatc 263  Q
    ||||||| || | || ||||| |||||||||||||||||||  |||||||    
T  26144271 agacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 26144222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 263
Target Start/End: Complemental strand, 26057525 - 26057276
Alignment:
Q  20 ttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatatt------ggcctatgagagatttttcggccaac 113  Q
    |||||||||||| |||||| ||||||| |||| |||||||||||| ||  ||||||||   |||||||      ||||||||||||||||||| ||||||    
T  26057525 ttcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagagatttttcagccaac 26057426  T
Q  114 actcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaa 213  Q
    ||||| | |||||||  |||   ||||||||||||| || ||||||| | ||||| ||    ||||| ||| ||||||||||||||||||||||||||||    
T  26057425 actccaacatgatgttctatgggatggccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtctagaa 26057326  T
Q  214 agacactttgttgctcttcctccaaagcatcatagcttactataagtatc 263  Q
    ||||||| || | || ||||| |||||||||||||||||||  |||||||    
T  26057325 agacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 26057276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 263
Target Start/End: Complemental strand, 26077495 - 26077246
Alignment:
Q  20 ttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatatt------ggcctatgagagatttttcggccaac 113  Q
    |||||||||||| |||||| ||||||| |||| |||||||||||| ||  ||||||||   |||||||      ||||||||||||||||||| ||||||    
T  26077495 ttcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaaggtcacatgagtgtcatattcccaatggcctatgagagatttttcagccaac 26077396  T
Q  114 actcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaa 213  Q
    ||||| | |||||||  |||   ||||||||||||| || ||||||| | ||||| ||    ||||| ||| ||||||||||||||||||||||||||||    
T  26077395 actccaacatgatgttctatgggatggccataatgagcatgaagtatttttttaacctttgtccatttacaccctttgaagcaacaagcaatgtctagaa 26077296  T
Q  214 agacactttgttgctcttcctccaaagcatcatagcttactataagtatc 263  Q
    ||||||| || | || ||||| |||||||||||||||||||  |||||||    
T  26077295 agacactctgatccttttccttcaaagcatcatagcttacttgaagtatc 26077246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 302
Target Start/End: Original strand, 27529883 - 27530178
Alignment:
Q  20 ttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatatt------ggcctatgagagatttttcggccaac 113  Q
    |||||||||||| |||||| ||||||| |||| |||||||||||| ||| |||||| || ||||||||      || | |||||||||||||| |||||     
T  27529883 ttcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaatgtcacataactatcatatttcaaatggtccatgagagatttttcagccaaa 27529982  T
Q  114 actcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaa 213  Q
    ||| | | |||||||  ||| ||||| ||||||||| || ||||||| ||||| | |||   ||||| ||| ||||||||||||||||||||||||||||    
T  27529983 actgcaacatgatgtactatgcaatgaccataatgagcatgaagtatttctttgacctctggccatttacaccctttgaagcaacaagcaatgtctagaa 27530082  T
Q  214 agacactttgttgctcttcctccaaagcatcatagcttactataagtat-------ctctttttattgggaatcttttcatatccatctaatgtac 302  Q
    |||||||||| |  |||| |||||||| ||||||||| ||| |||||||        ||| |||||||||||| | |||||| |||||||||||||    
T  27530083 agacactttgctcttctttctccaaagaatcatagctcactttaagtattctttggatctctttattgggaatttcttcatacccatctaatgtac 27530178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 311
Target Start/End: Complemental strand, 26657488 - 26657261
Alignment:
Q  91 ctatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatccttt 190  Q
    ||||||||||||||||  |||||||||| | ||||||| |||| ||||| ||||| ||| || ||||| | ||||  | |||   | ||  |||||||||    
T  26657488 ctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagtgtctcttcgacctcactcaatctacatccttt 26657389  T
Q  191 gaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttt 283  Q
    |||  ||||||| || |||| |||||||||||| | ||||||||||||| |||||||||||||| ||||||||       ||||||||||||||||||||    
T  26657388 gaaaaaacaagctatatctaaaaagacactttgctcctcttcctccaaatcatcatagcttactttaagtatctcttgaatctttttattgggaatcttt 26657289  T
Q  284 tcatatccatctaatgtacccttccatt 311  Q
    ||||||||||||||||||| ||||||||    
T  26657288 tcatatccatctaatgtactcttccatt 26657261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 311
Target Start/End: Complemental strand, 26763459 - 26763232
Alignment:
Q  91 ctatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatccttt 190  Q
    ||||||||||||||||  |||||||||| | ||||||| |||| ||||| ||||| ||| || ||||| | ||||  | |||   | ||  |||||||||    
T  26763459 ctatgagagatttttcaaccaacactccaacatgatgttttatgcaatgaccatagtgagcaagaagtgtctcttcgacctcactcaatctacatccttt 26763360  T
Q  191 gaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttt 283  Q
    |||  ||||||| || |||| |||||||||||| | ||||||||||||| |||||||||||||| ||||||||       ||||||||||||||||||||    
T  26763359 gaaaaaacaagctatatctaaaaagacactttgctcctcttcctccaaatcatcatagcttactttaagtatctcttgaatctttttattgggaatcttt 26763260  T
Q  284 tcatatccatctaatgtacccttccatt 311  Q
    ||||||||||||||||||| ||||||||    
T  26763259 tcatatccatctaatgtactcttccatt 26763232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 130 - 316
Target Start/End: Original strand, 27426307 - 27426500
Alignment:
Q  130 ttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctc 229  Q
    |||| ||||| ||||||||| || ||||||| ||||| | ||  ||||||| ||| |||||||||||||||||||||||||||||||||||||| | |||    
T  27426307 ttatgcaatgaccataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctc 27426406  T
Q  230 ttcctccaaagcatcatagcttactataagtat-------ctctttttattgggaatcttttcatatccatctaatgtacccttccattcttct 316  Q
    ||||||||||| ||||||||| ||| |||||||        ||| ||||||||||||||||||||| | ||||||||||  ||| |||||||||    
T  27426407 ttcctccaaagaatcatagctcactttaagtattctttggatctctttattgggaatcttttcataccaatctaatgtattcttgcattcttct 27426500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 87 - 316
Target Start/End: Complemental strand, 25512421 - 25512185
Alignment:
Q  87 tggcctatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatc 186  Q
    |||||||||||||||||||| ||||||||||| | |||||||  ||| ||||||||||||||| || ||||||| | ||| |  |    ||||| | | |    
T  25512421 tggcctatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtattttttttacttttgtccatttatacc 25512322  T
Q  187 ctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaat 279  Q
    |||||||| ||||||||||||||||||||||||| || | || ||||| |||||||||||||||||||  |||||||       | | ||||| ||||||    
T  25512321 ctttgaagtaacaagcaatgtctagaaagacactctgatccttttccttcaaagcatcatagcttacttgaagtatcctttggatatctttatcgggaat 25512222  T
Q  280 cttttcatatccatctaatgtacccttccattcttct 316  Q
     ||||||||  |||||||||||| |||||| ||||||    
T  25512221 attttcatactcatctaatgtacgcttccaatcttct 25512185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 87 - 316
Target Start/End: Complemental strand, 25581252 - 25581016
Alignment:
Q  87 tggcctatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatc 186  Q
    |||||||||||||||||||| ||||||||||| | |||||||  ||| ||||||||||||||| || ||||||| | ||||| ||    ||||| ||| |    
T  25581252 tggcctatgagagatttttcagccaacactccaacatgatgttctatgcaatggccataatgagcatgaagtatttttttaacctttgtccatttacacc 25581153  T
Q  187 ctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaat 279  Q
    |||||||||||||||||||||||||||||||||| |  | || |   ||||||||||||||||| |||  |||||||       | | ||||||||||||    
T  25581152 ctttgaagcaacaagcaatgtctagaaagacactcttctcctttggttccaaagcatcatagctaacttgaagtatcctttggatatctttattgggaat 25581053  T
Q  280 cttttcatatccatctaatgtacccttccattcttct 316  Q
     ||||||||  |||||||| ||| |||||| ||||||    
T  25581052 attttcatactcatctaatatacgcttccaatcttct 25581016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 20 - 316
Target Start/End: Complemental strand, 25484662 - 25484353
Alignment:
Q  20 ttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatatt------ggcctatgagagatttttcggccaac 113  Q
    ||||||||| || |||||| ||||||| |||| |||||||||||| ||  |||||| |   |||||||      | ||||||||| ||||||| ||||||    
T  25484662 ttcttgtcgaacgacttctttacccatgtcctctatcaagtcatgtaaggtcacataagtgtcatattcccaatgacctatgagacatttttcagccaac 25484563  T
Q  114 actcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaa 213  Q
    ||||| | |||||||  ||| ||||||||||||||| || ||||||| | ||| |  |    ||||| | | ||||||||| ||||||||||||||||||    
T  25484562 actccaacatgatgttctatgcaatggccataatgagcatgaagtattttttttacttttgtccatttataccctttgaagtaacaagcaatgtctagaa 25484463  T
Q  214 agacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatctaatgtaccctt 306  Q
    ||||||| || | || ||||| |||||||||||||||||||  |||||||       | | ||||| |||||| ||||||||  |||||||||||| |||    
T  25484462 agacactctgatccttttccttcaaagcatcatagcttacttgaagtatcctttggatatctttatcgggaatattttcatactcatctaatgtacgctt 25484363  T
Q  307 ccattcttct 316  Q
    ||| ||||||    
T  25484362 ccaatcttct 25484353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 135 - 316
Target Start/End: Original strand, 25492019 - 25492207
Alignment:
Q  135 caatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcct 234  Q
    ||||||||||||||| || ||||||||| ||| |  ||| ||||||  || ||||||||| ||||||  ||||||||||||| ||| || | || |||||    
T  25492019 caatggccataatgatcatgaagtatatttttgacatccgcccatttccaacctttgaagaaacaagtcatgtctagaaagatactctgctccttttcct 25492118  T
Q  235 ccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatctaatgtacccttccattcttct 316  Q
    |||||||||||||||| ||| ||||||||       ||| |||||||  ||||||||||||  |||||||||||| |||||||||||||    
T  25492119 ccaaagcatcatagctcactctaagtatcttttggatctctttattgaaaatcttttcatactcatctaatgtacacttccattcttct 25492207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 264
Target Start/End: Original strand, 27663872 - 27664043
Alignment:
Q  92 tatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttg 191  Q
    |||||||||||  ||  |||||||||  | ||||||||| ||  |||||||||||||||   ||||| | |||  ||||| || ||| ||||||||||||    
T  27663872 tatgagagattcatcaaccaacactctaacatgatgtgtcattgaatggccataatgaaattgaagtgtctctg-aaacttctgccaatcacatcctttg 27663970  T
Q  192 aagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    |||||||||||||| || | ||||||||| ||||| ||||| ||||||| |||| |||||||| |||||||||    
T  27663971 aagcaacaagcaatatccaaaaagacactctgttgttcttcttccaaagtatcaaagcttactttaagtatct 27664043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 27680586 - 27680513
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacat 75  Q
    ||||||||||||| ||| |||||||||||| |||||| ||||||| ||||||||||||||||| ||||||||||    
T  27680586 tccaggctctttaggtgattcttgtcggacgacttctttacccatgtcctttatcaagtcatgtaatctcacat 27680513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 262
Target Start/End: Original strand, 29842649 - 29842819
Alignment:
Q  92 tatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttg 191  Q
    |||||||| ||||||| |||||||||| | ||||| |  ||| || || |||| || | ||| ||| ||||||| || |||  || | ||| | ||||||    
T  29842649 tatgagagttttttcgaccaacactccaatatgatattctatgcattgaccatgataagcacaaagaatatcttcaacctctcccaaatcataccctttg 29842748  T
Q  192 aagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtat 262  Q
    ||||||||||||||||| ||||| |||| |||||  |||||||||||||||||| |||||| | |||||||    
T  29842749 aagcaacaagcaatgtcgagaaaaacaccttgttcgtcttcctccaaagcatcaaagcttattttaagtat 29842819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 267
Target Start/End: Original strand, 28296446 - 28296572
Alignment:
Q  141 ccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaag 240  Q
    ||||||||| || ||||||||| || ||  || | | ||||| ||||||||||||| ||||| ||||| ||||| ||| |||  |  |||||||||||||    
T  28296446 ccataatgagcatgaagtatattttcaagttctttcaattcatatcctttgaagcagcaagcgatgtcaagaaaaacatttttctcatcttcctccaaag 28296545  T
Q  241 catcatagcttactataagtatctctt 267  Q
    ||||| |||||||| ||||||||||||    
T  28296546 catcaaagcttactttaagtatctctt 28296572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 28515627 - 28515501
Alignment:
Q  141 ccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaag 240  Q
    ||||||||| || ||||||||| || ||  || | | ||||| ||||||||||||| ||||| ||||| ||||| ||| |||  |  |||||||||||||    
T  28515627 ccataatgagcatgaagtatattttcaagttctttcaattcatatcctttgaagcagcaagcgatgtcaagaaaaacatttttctcatcttcctccaaag 28515528  T
Q  241 catcatagcttactataagtatctctt 267  Q
    ||||| |||||||| ||||||||||||    
T  28515527 catcaaagcttactttaagtatctctt 28515501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 262
Target Start/End: Complemental strand, 29827511 - 29827341
Alignment:
Q  92 tatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttg 191  Q
    |||||||| ||||||| |||||||||| | ||||| |  ||| |  || |||| |||| ||| ||| |||||||| | |||  || | ||| | ||||||    
T  29827511 tatgagagttttttcgaccaacactccaatatgatattctatgctttgaccatgatgagcacaaagaatatctttgacctctcccaaatcataccctttg 29827412  T
Q  192 aagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtat 262  Q
    ||||||||||||||||| ||||| |||| |||||  |||||||||||||||||| | |||| | |||||||    
T  29827411 aagcaacaagcaatgtcgagaaaaacaccttgttcatcttcctccaaagcatcaaaacttattttaagtat 29827341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 264
Target Start/End: Complemental strand, 26938554 - 26938382
Alignment:
Q  92 tatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttg 191  Q
    |||||||||||| |   |||||||||| | ||||| | |||| ||||| ||||||||| || ||||| |||||| || |||  || ||  ||| || |||    
T  26938554 tatgagagatttattaaccaacactccaacatgattttttatgcaatgaccataatgagcatgaagtttatcttcaacctcagccaatctacacccattg 26938455  T
Q  192 aagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    |||||||| | ||| || ||||||||||||||||  ||||| ||||||  |||| |||||||| |||||||||    
T  26938454 aagcaacacgtaatatccagaaagacactttgttcttcttcatccaaacaatcaaagcttactctaagtatct 26938382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 27591768 - 27591850
Alignment:
Q  182 acatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||| |||||||||||| || | ||||||||| || | |||||| ||||||||||||||||| | | |||||||||    
T  27591768 acatcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcttccaaagcatcatagctgagtctaagtatct 27591850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 27676367 - 27676449
Alignment:
Q  182 acatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||| |||||||||||| || | ||||||||| || | |||||| ||||||||||||||||| | | |||||||||    
T  27676367 acatcctttgatgcaacaagcaatatccaaaaagacactctgctcctcttcgtccaaagcatcatagctcagtctaagtatct 27676449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 267
Target Start/End: Complemental strand, 28186870 - 28186744
Alignment:
Q  141 ccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaag 240  Q
    ||||||||| || |||||| ||||| ||  || | | ||||| ||||||||||||| ||||| ||||| ||||| ||| ||||||   ||||| ||||||    
T  28186870 ccataatgagcatgaagtacatcttcaagttctttcaattcatatcctttgaagcagcaagcgatgtcgagaaaaacattttgttctgcttcccccaaag 28186771  T
Q  241 catcatagcttactataagtatctctt 267  Q
    ||||| |||||||| | ||||||||||    
T  28186770 catcaaagcttactttgagtatctctt 28186744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 28326954 - 28326832
Alignment:
Q  141 ccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaag 240  Q
    ||||||||| || |||||||||||| ||  || | | ||||| |||| |||||||| ||||||||||| ||||| ||| | || |  ||||| |||||||    
T  28326954 ccataatgagcatgaagtatatcttcaagttctttcaattcatatccattgaagcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaag 28326855  T
Q  241 catcatagcttactataagtatc 263  Q
    ||||| |||||||| ||||||||    
T  28326854 catcaaagcttactttaagtatc 28326832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 141 - 263
Target Start/End: Complemental strand, 28504590 - 28504468
Alignment:
Q  141 ccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaag 240  Q
    ||||||||| || |||||||||||| ||  || | | ||||| |||| |||||||| ||||||||||| ||||| ||| | || |  ||||| |||||||    
T  28504590 ccataatgagcatgaagtatatcttcaagttctttcaattcatatccattgaagcagcaagcaatgtcgagaaaaacattctgctcatcttcatccaaag 28504491  T
Q  241 catcatagcttactataagtatc 263  Q
    ||||| |||||||| ||||||||    
T  28504490 catcaaagcttactttaagtatc 28504468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 28244228 - 28244147
Alignment:
Q  184 atcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatctc 265  Q
    ||||||||||||| ||||||||||| ||||| ||| | || |  |||| ||||||||||||| |||||||| ||||||||||    
T  28244228 atcctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctc 28244147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 28787877 - 28787804
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacat 75  Q
    ||||||||||||| | | |||||||||||| |||||| ||||||| || | |||||||||||| ||||||||||    
T  28787877 tccaggctctttaggcgattcttgtcggacgacttctttacccatgtcttctatcaagtcatgtaatctcacat 28787804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 28793998 - 28793925
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacat 75  Q
    ||||||||||||| | | |||||||||||| |||||| ||||||| || | |||||||||||| ||||||||||    
T  28793998 tccaggctctttaggcgattcttgtcggacgacttctttacccatgtcttctatcaagtcatgtaatctcacat 28793925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 26804080 - 26804020
Alignment:
Q  4 caggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatg 64  Q
    |||| |||||| ||| |||||||||||| |||||| ||||||| |||||||||||||||||    
T  26804080 caggatctttaggtgattcttgtcggacgacttctttacccatgtcctttatcaagtcatg 26804020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 27603253 - 27603317
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgca 66  Q
    ||||||||||||| ||| |||||||||||| |||||| ||||||| |||| |||||||| |||||    
T  27603253 tccaggctctttaggtgattcttgtcggacgacttctttacccatgtcctctatcaagttatgca 27603317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 26637264 - 26637193
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcac 73  Q
    ||||||||  ||||||| |||||||||||| | |||| |||||||||||| |||||||||||| ||| ||||    
T  26637264 tccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatcaagtcatgtaatgtcac 26637193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 26743230 - 26743159
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcac 73  Q
    ||||||||  ||||||| |||||||||||| | |||| |||||||||||| |||||||||||| ||| ||||    
T  26743230 tccaggcttattacgtgattcttgtcggacgatttctatacccatatcctctatcaagtcatgtaatgtcac 26743159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 26978800 - 26978733
Alignment:
Q  197 acaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||| || | ||||||||| ||||| ||||| |||||||||||| |||||||| |||||||||    
T  26978800 acaagcaatatccaaaaagacactctgttgttcttcgtccaaagcatcaaagcttactttaagtatct 26978733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26850349 - 26850277
Alignment:
Q  1 ttccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcac 73  Q
    ||||||||||||||  || |||||||||||| | |||| ||||||| |||| |||||||||||| ||| ||||    
T  26850349 ttccaggctctttaattgattcttgtcggacgatttctttacccatgtcctctatcaagtcatgtaatgtcac 26850277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 28141161 - 28141089
Alignment:
Q  3 ccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacat 75  Q
    |||||||||||  ||| ||||||||| |||| |||| ||||||| |||| |||||||||||| ||| ||||||    
T  28141161 ccaggctcttttggtgattcttgtcgaacaatttctttacccatctcctctatcaagtcatgtaatgtcacat 28141089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 264
Target Start/End: Complemental strand, 26960545 - 26960478
Alignment:
Q  197 acaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||| || | ||||||||| ||||| |||||  ||||||| |||||||||||| |||||||||    
T  26960545 acaagcaatatccaaaaagacactctgttgttcttcagccaaagcgtcatagcttactttaagtatct 26960478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 26960750 - 26960671
Alignment:
Q  1 ttccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgacca 80  Q
    ||||||||||||||  || ||| ||||| |||| |||  |||||||||||| |||||||||||| ||| ||||| |||||    
T  26960750 ttccaggctctttaattgattcctgtcgaacaatttccatacccatatcctctatcaagtcatgtaatgtcacacgacca 26960671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 27591573 - 27591644
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcac 73  Q
    ||||||||||||| ||| |||||||||||| |||||| |||||||  ||| |||||| ||||| ||| ||||    
T  27591573 tccaggctctttaggtgattcttgtcggacgacttctttacccatgacctctatcaattcatgtaatgtcac 27591644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 27676172 - 27676243
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcac 73  Q
    ||||||||||||| ||| |||||||||||| |||||| |||||||  ||| |||||| ||||| ||| ||||    
T  27676172 tccaggctctttaggtgattcttgtcggaccacttctttacccatgacctctatcaattcatgtaatgtcac 27676243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 27663761 - 27663823
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatg 64  Q
    |||||||||||||  || |||||||||||| | |||| ||||||||| || ||||||||||||    
T  27663761 tccaggctctttaattgattcttgtcggactatttctatacccatatactctatcaagtcatg 27663823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 2186442 - 2186369
Alignment:
Q  1 ttccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcaca 74  Q
    |||||||||||||  ||| ||||||||| || | |||| ||||||| |||| |||||||||||| ||| |||||    
T  2186442 ttccaggctcttttggtgattcttgtcgtacgatttctttacccatttcctctatcaagtcatgtaatgtcaca 2186369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Complemental strand, 26825445 - 26825376
Alignment:
Q  6 ggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacat 75  Q
    |||||||||  || || ||||||||| |||||| | ||||| ||||||||||||||||| ||| ||||||    
T  26825445 ggctctttagatgattgttgtcggactacttctttgcccatgtcctttatcaagtcatgtaatgtcacat 26825376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 28240778 - 28240725
Alignment:
Q  192 aagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatca 245  Q
    ||||||||||||||||| ||||| |||||||| |  |||| |||||||||||||    
T  28240778 aagcaacaagcaatgtcgagaaaaacactttgctcatctttctccaaagcatca 28240725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 29827614 - 29827541
Alignment:
Q  1 ttccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcaca 74  Q
    |||||||||||||  ||| ||||||||| |||| |||| ||||||| || | |||||||||||| ||| |||||    
T  29827614 ttccaggctctttcggtgattcttgtcgtacaatttctttacccatgtcttctatcaagtcatgtaatgtcaca 29827541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 25546586 - 25546542
Alignment:
Q  20 ttcttgtcggacaacttctctacccatatcctttatcaagtcatg 64  Q
    |||||||||||| |||||| ||||||| |||| ||||||||||||    
T  25546586 ttcttgtcggacgacttctttacccatgtcctctatcaagtcatg 25546542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 264
Target Start/End: Complemental strand, 28140968 - 28140888
Alignment:
Q  184 atcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||| |||| |||||||||||||| ||||| |||||||| |  |||| |||||||  |||| |||| ||| |||||||||    
T  28140968 atcctctgaaacaacaagcaatgtcgagaaaaacactttgctcatctttctccaaactatcaaagctcactttaagtatct 28140888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 95 - 316
Target Start/End: Complemental strand, 291 - 63
Alignment:
Q  95 gagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaag 194  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||| |||||||| |||| ||||||||||||||    
T  291 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccacatcctttgaag 192  T
Q  195 caacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcat 287  Q
    ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||    
T  191 caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaatcttttcat 92  T
Q  288 atccatctaatgtacccttccattcttct 316  Q
    |||||||||||||||||||||||||||||    
T  91 atccatctaatgtacccttccattcttct 63  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 155; Significance: 3e-82; HSPs: 4)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 95 - 316
Target Start/End: Original strand, 3372 - 3600
Alignment:
Q  95 gagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaag 194  Q
    |||||||||||| ||||||||| |||||||||||||||| | ||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||    
T  3372 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtatatattcaaactcctcccatccacatcctttgaag 3471  T
Q  195 caacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcat 287  Q
    ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||    
T  3472 caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctggtggatctttttattgggaatcttttcat 3571  T
Q  288 atccatctaatgtacccttccattcttct 316  Q
    |||||||||||||||||||||||||||||    
T  3572 atccatctaatgtacccttccattcttct 3600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 95 - 316
Target Start/End: Original strand, 12335 - 12563
Alignment:
Q  95 gagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaag 194  Q
    |||||||||||| ||||||||| |||||||||||||||| | ||||||||||||| |||||||||||| || |||||||| |||| ||||||||||||||    
T  12335 gagagatttttcagccaacactactagatgatgtgttatgcgatggccataatgagcacgaagtatatattcaaactccttccatccacatcctttgaag 12434  T
Q  195 caacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcat 287  Q
    ||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||       ||||||||||||||||||||||||    
T  12435 caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcatagcttactttaagtatctcgtggatctttttattgggaatcttttcat 12534  T
Q  288 atccatctaatgtacccttccattcttct 316  Q
    |||||||||||||||||||||||||||||    
T  12535 atccatctaatgtacccttccattcttct 12563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 3261 - 3323
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatg 64  Q
    ||||||||||||  | | |||||||||||| |||||| ||||||| |||||||||||||||||    
T  3261 tccaggctctttgggcgattcttgtcggacgacttctttacccatgtcctttatcaagtcatg 3323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 12224 - 12286
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatg 64  Q
    ||||||||||||  | | |||||||||||| |||||| ||||||| |||||||||||||||||    
T  12224 tccaggctctttgggcgattcttgtcggacgacttctttacccatgtcctttatcaagtcatg 12286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 95 - 316
Target Start/End: Complemental strand, 9009 - 8781
Alignment:
Q  95 gagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaag 194  Q
    |||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||| |||||||| |||| ||||||||||||||    
T  9009 gagagatttttcagccaacactcctagatgatgttttatgcaatggccataatgagcacgtagtatatcttcaaactccttccatccacatcctttgaag 8910  T
Q  195 caacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcat 287  Q
    ||||| |||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||||||||       ||||||||||||||||||||||||    
T  8909 caacaggcaatgtctagaaaaacactttgctgctcttcctccaaagcatcataacttactttaagtatctcgtggatctttttattgggaatcttttcat 8810  T
Q  288 atccatctaatgtacccttccattcttct 316  Q
    |||||||||||||||||||||||||||||    
T  8809 atccatctaatgtacccttccattcttct 8781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 4e-78; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 2 - 316
Target Start/End: Original strand, 266907 - 267228
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggcctatgagagat 101  Q
    ||||||||||||| ||| |||||| ||||| |||||| ||||||| |||| ||||| |||||| ||| ||||||||| || ||||||| |||||||||||    
T  266907 tccaggctctttaggtgattcttggcggaccacttctttacccatgtcctctatcatgtcatgtaatgtcacatgactataatattggtctatgagagat 267006  T
Q  102 ttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaag 201  Q
    ||||| |||||||||||||||||||||||||| || ||||||||||||  | ||||||||| |||    || ||||||||| ||||||||||||||||||    
T  267007 ttttcagccaacactcctagatgatgtgttatgcagtggccataatgagaatgaagtatatgtttggcatcttcccattcatatcctttgaagcaacaag 267106  T
Q  202 caatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttcatatccatc 294  Q
    ||||||||| ||||||||| || | |||||| |||||| |||||||||| ||| ||||||||       ||| ||||||||||||||| ||||| |||||    
T  267107 caatgtctaaaaagacactctgctcctcttcttccaaaccatcatagctcactttaagtatcttttggatctctttattgggaatcttatcatacccatc 267206  T
Q  295 taatgtacccttccattcttct 316  Q
    ||||||||||||||||||||||    
T  267207 taatgtacccttccattcttct 267228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 93 - 316
Target Start/End: Original strand, 28126333 - 28126563
Alignment:
Q  93 atgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttga 192  Q
    ||||||||||||||  |||||||||| | ||||||  |||| ||||||||||||||| || ||||||| | || || |||   | ||  | | |||||||    
T  28126333 atgagagatttttcaaccaacactccaacatgatgctttatgcaatggccataatgagcatgaagtatcttttcaacctctgtcaatctataccctttga 28126432  T
Q  193 agcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatctctt-------tttattgggaatcttttc 285  Q
    |||| ||||| || || |||||||||||||| |  ||||||||||||||||||||||||| | ||| ||||||||       |||||| |||||||||||    
T  28126433 agcagcaagctatatcgagaaagacactttgctcatcttcctccaaagcatcatagcttagtttaaatatctcttggatctttttatttggaatcttttc 28126532  T
Q  286 atatccatctaatgtacccttccattcttct 316  Q
    |||||||||||||||||||||||||||||||    
T  28126533 atatccatctaatgtacccttccattcttct 28126563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 91 - 316
Target Start/End: Original strand, 28132157 - 28132389
Alignment:
Q  91 ctatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatccttt 190  Q
    ||||||||||||||||| |||||||||| | ||||||| |||| |||||||||| |||| || ||||||| ||||  | |     | ||  | | || ||    
T  28132157 ctatgagagatttttcgaccaacactccaacatgatgttttatgcaatggccattatgagcatgaagtatctcttcgaccattgtcaatctatacccctt 28132256  T
Q  191 gaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatctc-------tttttattgggaatcttt 283  Q
    |||||||||||| || || |||||||||||||| | |||||||||||||||||| || |||||| ||| ||||||       |||||||| |||||||||    
T  28132257 gaagcaacaagctatatccagaaagacactttgctcctcttcctccaaagcatcgtaacttactttaaatatctcatggatctttttattaggaatcttt 28132356  T
Q  284 tcatatccatctaatgtacccttccattcttct 316  Q
    ||||||||||||||||||| |||||||||||||    
T  28132357 tcatatccatctaatgtacacttccattcttct 28132389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 262
Target Start/End: Complemental strand, 26137319 - 26137243
Alignment:
Q  186 cctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtat 262  Q
    |||||||||||||||||||| || | ||| ||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  26137319 cctttgaagcaacaagcaatatccaaaaatacactttgttgttcttcgtccaaagcatcatagcttactctaagtat 26137243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26137507 - 26137440
Alignment:
Q  1 ttccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaat 68  Q
    ||||||| |||||  ||| |||||||||||||| |||| |||||||||||| |||||||||||| |||    
T  26137507 ttccaggttctttgggtgattcttgtcggacaatttctttacccatatcctctatcaagtcatgtaat 26137440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 75
Target Start/End: Original strand, 28126242 - 28126315
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacat 75  Q
    ||||||||||||||||| |||||  ||||| | |||| ||||| |||||| |||||||||||| ||| ||||||    
T  28126242 tccaggctctttacgtgattctttccggacgatttctttacccgtatcctctatcaagtcatgtaatgtcacat 28126315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 250
Target Start/End: Original strand, 5922218 - 5922284
Alignment:
Q  184 atcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagct 250  Q
    |||||||||||||||||||||| || ||||| |||||||  |  ||||| |||||||||||| ||||    
T  5922218 atcctttgaagcaacaagcaatatcaagaaaaacacttttctcttcttcttccaaagcatcaaagct 5922284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 139; Significance: 1e-72; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 83 - 316
Target Start/End: Original strand, 29272486 - 29272726
Alignment:
Q  83 atattggcctatgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattca 182  Q
    ||||||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||  | ||||||||| |||    || |||||||||    
T  29272486 atattggtctatgagagatttttcagccaatactcctagatgatgtgttatgcaatggccataatgagaatgaagtatatatttggcatcttcccattca 29272585  T
Q  183 catcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgg 275  Q
    || ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||       || |||||||||    
T  29272586 caacctttgaagcaacaagcaatgtccagaaagacactttgttgctcttcttccaaagcatcataacttactttaagtatctggtggatccttttattgg 29272685  T
Q  276 gaatcttttcatatccatctaatgtacccttccattcttct 316  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29272686 gaatcttttcatatccatctaatgtacccttccattcttct 29272726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 35984720 - 35984652
Alignment:
Q  196 aacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||||| ||||| |||||||| |  |||||||| ||||||||| | |||||| |||||||||    
T  35984720 aacaagcaatgtcaagaaaaacactttgctcatcttcctctaaagcatcaaaacttactttaagtatct 35984652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Original strand, 29272396 - 29272461
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaa 67  Q
    |||||||||||||  || |||||||||||| |||||| ||||||| |||  |||||| ||||||||    
T  29272396 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcccctatcaaatcatgcaa 29272461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 109; Significance: 8e-55; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 2 - 312
Target Start/End: Original strand, 2097 - 2423
Alignment:
Q  2 tccaggctctttacgtgtttcttgtcggacaacttctctacccatatcctttatcaagtcatgcaatctcacatgaccatcatattggccta-------- 93  Q
    |||||||||||||  || |||||||||||| |||||| ||||||| |||| |||||||||||| ||  |||||| | | |||||||  | ||            
T  2097 tccaggctctttaattgattcttgtcggacgacttctttacccatgtcctctatcaagtcatgtaacatcacataatcgtcatattcccgtaatttcttt 2196  T
Q  94 -tgagagatttttcggccaacactcctagatgatgtgttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttga 192  Q
     |||||||||||||  ||||||||||||||||||||||||| |||||||||||||||  |  |||||||| |||    || ||||||| ||||| |||||    
T  2197 atgagagatttttcaaccaacactcctagatgatgtgttatgcaatggccataatgagaattaagtatatatttggcatcttcccatttacatcttttga 2296  T
Q  193 agcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatc-------tctttttattgggaatcttttc 285  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||||       ||| ||||||||||||| | ||    
T  2297 agcaacaagcaatgtctagaaagacactttgctgctcttcctccaaagcatcataacttactttaagtatcttttggatctctttattgggaatcctgtc 2396  T
Q  286 atatccatctaatgtacccttccattc 312  Q
    ||| ||||||||||||  |||||||||    
T  2397 atacccatctaatgtattcttccattc 2423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 61056 - 60863
Alignment:
Q  130 ttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctc 229  Q
    |||| ||||| ||||||||| || ||||||| ||||| | ||  ||||||| ||| |||||||||||||||||||||||||||||||||||||| | |||    
T  61056 ttatgcaatgaccataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctc 60957  T
Q  230 ttcctccaaagcatcatagcttactataagtat-------ctctttttattgggaatcttttcatatccatctaatgtacccttccattcttct 316  Q
    ||||||||||| ||||||||| ||| |||||||        ||| ||||||||||||||||||||| | ||||||||||  ||| |||||||||    
T  60956 ttcctccaaagaatcatagctcactttaagtattctttggatctctttattgggaatcttttcataccaatctaatgtattcttgcattcttct 60863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 130 - 316
Target Start/End: Complemental strand, 18075248 - 18075055
Alignment:
Q  130 ttatacaatggccataatgaacacgaagtatatctttaaactcctcccattcacatcctttgaagcaacaagcaatgtctagaaagacactttgttgctc 229  Q
    |||| ||||| ||||||||| || ||||||| ||||| | ||  ||||||| ||| |||||||||||||||||||||||||||||||||||||| | |||    
T  18075248 ttatgcaatgaccataatgagcatgaagtatttctttgaccttttcccatttacaacctttgaagcaacaagcaatgtctagaaagacactttgctcctc 18075149  T
Q  230 ttcctccaaagcatcatagcttactataagtat-------ctctttttattgggaatcttttcatatccatctaatgtacccttccattcttct 316  Q
    ||||||||||| ||||||||| ||| |||||||        ||| ||||||||||||||||||||| | ||||||||||  ||| |||||||||    
T  18075148 ttcctccaaagaatcatagctcactttaagtattctttggatctctttattgggaatcttttcataccaatctaatgtattcttgcattcttct 18075055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 18688369 - 18688451
Alignment:
Q  182 acatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||||| |||||||||| || | ||||||||||||||| ||||| |||||||||||| |||||||| |||||||||    
T  18688369 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtatct 18688451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 18698143 - 18698225
Alignment:
Q  182 acatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||||| |||||||||| || | ||||||||||||||| ||||| |||||||||||| |||||||| |||||||||    
T  18698143 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtatct 18698225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 18730247 - 18730329
Alignment:
Q  182 acatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||||| |||||||||| || | ||||||||||||||| ||||| |||||||||||| |||||||| |||||||||    
T  18730247 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgtccaaagcatcaaagcttactttaagtatct 18730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 18678303 - 18678385
Alignment:
Q  182 acatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||||| |||||||||| || | ||||||| ||||||| ||||| |||||||||||| |||||||| |||||||||    
T  18678303 acatcctttgaagaaacaagcaatatccaaaaagacaatttgttgttcttcgtccaaagcatcaaagcttactttaagtatct 18678385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 18722828 - 18722910
Alignment:
Q  182 acatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||||| |||||||||| || | ||||||||||||||| |||||  ||||||||||| |||||||| |||||||||    
T  18722828 acatcctttgaagaaacaagcaatatccaaaaagacactttgttgttcttcgcccaaagcatcaaagcttactttaagtatct 18722910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 264
Target Start/End: Original strand, 18654220 - 18654302
Alignment:
Q  182 acatcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||||||||||  |||||||||| || | ||||||||||||||| ||||| |||||||||||| | |||||| |||||||||    
T  18654220 acatcctttgaacaaacaagcaatatccaaaaagacactttgttgttcttcatccaaagcatcaaaacttactttaagtatct 18654302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 186 - 264
Target Start/End: Complemental strand, 3281090 - 3281012
Alignment:
Q  186 cctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatct 264  Q
    ||||| ||||||||||||||||| ||||| |||||||| |  |||||||||||||||||| | || ||| |||||||||    
T  3281090 cctttaaagcaacaagcaatgtcgagaaaaacactttgctcgtcttcctccaaagcatcaaaactcactttaagtatct 3281012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 252
Target Start/End: Original strand, 17991967 - 17992032
Alignment:
Q  187 ctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagctta 252  Q
    ||||||||||||||||||| || | ||||||||| | ||| ||||| |||| ||||||| ||||||    
T  17991967 ctttgaagcaacaagcaatatccaaaaagacactcttttgttcttcatccagagcatcaaagctta 17992032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 265
Target Start/End: Complemental strand, 44390 - 44309
Alignment:
Q  184 atcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtatctc 265  Q
    ||||||||||||| ||||||||||| ||||| ||| | || |  |||| ||||||||||||| |||||||| ||||||||||    
T  44390 atcctttgaagcagcaagcaatgtcgagaaaaacattctgctcatctttctccaaagcatcaaagcttactttaagtatctc 44309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 192 - 245
Target Start/End: Complemental strand, 40940 - 40887
Alignment:
Q  192 aagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatca 245  Q
    ||||||||||||||||| ||||| |||||||| |  |||| |||||||||||||    
T  40940 aagcaacaagcaatgtcgagaaaaacactttgctcatctttctccaaagcatca 40887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 267
Target Start/End: Original strand, 57087 - 57126
Alignment:
Q  228 tcttcctccaaagcatcatagcttactataagtatctctt 267  Q
    |||||||||||||||||| |||||||| ||||||||||||    
T  57087 tcttcctccaaagcatcaaagcttactttaagtatctctt 57126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 262
Target Start/End: Complemental strand, 16692300 - 16692222
Alignment:
Q  184 atcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagcttactataagtat 262  Q
    ||||||||||||||||||||||||| | ||| ||||| | ||  ||||||||||||  |||| | |||||| |||||||    
T  16692300 atcctttgaagcaacaagcaatgtccaaaaaaacactcttttcatcttcctccaaactatcaaaacttactttaagtat 16692222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 184 - 252
Target Start/End: Original strand, 238614 - 238682
Alignment:
Q  184 atcctttgaagcaacaagcaatgtctagaaagacactttgttgctcttcctccaaagcatcatagctta 252  Q
    |||||||||||||||| |||||||| ||||| ||| |||  |  |||||||  ||||||||||||||||    
T  238614 atcctttgaagcaacatgcaatgtcaagaaaaacaattttctcttcttcctgtaaagcatcatagctta 238682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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